AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1448680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448680 MtrunA17_Chr2g0285461 95.815 908 24 2 1 894 1 908 0.0 1776
Msa1448680 MtrunA17_Chr8g0376771 78.341 928 153 13 1 894 1 914 0.0 1359
Msa1448680 MtrunA17_Chr5g0433301 56.114 916 305 22 1 894 1 841 0.0 872
Msa1448680 MtrunA17_Chr3g0109391 54.171 923 285 24 17 894 20 849 0.0 844
Msa1448680 MtrunA17_Chr4g0070181 57.715 499 169 14 1 468 1 488 2.29e-164 509
Msa1448680 MtrunA17_Chr4g0070181 36.481 233 123 6 631 853 869 1086 1.02e-30 130
Msa1448680 MtrunA17_Chr2g0301251 56.436 505 166 15 1 467 1 489 5.13e-156 487
Msa1448680 MtrunA17_Chr2g0301251 57.273 110 43 2 761 870 986 1091 1.38e-31 133
Msa1448680 MtrunA17_Chr1g0156321 65.123 367 110 5 15 366 35 398 7.12e-154 474
Msa1448680 MtrunA17_Chr1g0156321 49.600 125 62 1 742 866 736 859 1.12e-29 127
Msa1448680 MtrunA17_Chr8g0389081 52.174 552 219 13 20 534 29 572 2.15e-146 461
Msa1448680 MtrunA17_Chr8g0389081 64.000 100 30 1 761 854 985 1084 2.69e-34 142
Msa1448680 MtrunA17_Chr2g0276781 52.186 366 156 6 19 369 19 380 9.20e-113 360
Msa1448680 MtrunA17_Chr2g0276781 37.778 90 54 2 761 849 547 635 9.72e-14 75.5
Msa1448680 MtrunA17_Chr8g0385791 50.546 366 163 6 19 369 55 417 1.64e-108 353
Msa1448680 MtrunA17_Chr8g0385791 46.667 90 46 2 761 849 710 798 2.80e-17 87.0
Msa1448680 MtrunA17_Chr8g0346711 50.581 344 151 6 20 349 26 364 1.01e-103 337
Msa1448680 MtrunA17_Chr8g0346711 44.086 93 49 2 758 849 555 645 2.96e-16 83.6
Msa1448680 MtrunA17_Chr7g0239061 47.326 374 173 10 15 370 6 373 5.18e-99 324
Msa1448680 MtrunA17_Chr7g0239061 37.000 100 60 2 751 849 560 657 1.81e-14 77.8
Msa1448680 MtrunA17_Chr4g0009751 50.000 366 151 11 21 364 17 372 8.67e-97 316
Msa1448680 MtrunA17_Chr2g0326281 47.215 377 158 9 23 361 56 429 4.93e-96 320
Msa1448680 MtrunA17_Chr2g0326281 44.660 103 52 3 757 858 691 789 4.89e-21 99.0
Msa1448680 MtrunA17_Chr4g0029671 41.408 483 220 14 23 459 54 519 1.01e-94 315
Msa1448680 MtrunA17_Chr4g0029671 38.583 127 69 3 724 849 633 751 6.91e-19 92.0
Msa1448680 MtrunA17_Chr4g0046371 45.526 380 158 9 23 369 38 401 5.62e-92 306
Msa1448680 MtrunA17_Chr2g0282961 46.467 368 156 9 4 344 35 388 6.44e-92 303
Msa1448680 MtrunA17_Chr4g0028971 36.830 448 200 13 13 389 2 437 5.21e-71 248
Msa1448680 MtrunA17_Chr2g0326761 37.010 408 193 10 17 368 5 404 1.42e-69 244
Msa1448680 MtrunA17_Chr1g0199681 36.320 413 203 10 13 373 84 488 1.89e-67 238
Msa1448680 MtrunA17_Chr1g0181211 34.867 413 180 9 14 355 18 412 3.89e-64 229
Msa1448680 MtrunA17_Chr3g0115271 34.837 399 204 8 11 361 7 397 8.41e-58 209
Msa1448680 MtrunA17_Chr7g0264171 32.829 463 224 16 18 404 26 477 4.19e-56 204
Msa1448680 MtrunA17_Chr5g0424931 33.165 395 202 12 10 362 11 385 5.11e-49 182
Msa1448680 MtrunA17_Chr5g0417281 31.510 384 222 11 16 378 4 367 7.01e-47 176
Msa1448680 MtrunA17_Chr5g0436761 34.501 371 193 13 12 356 3 349 1.87e-46 173
Msa1448680 MtrunA17_Chr7g0264161 34.516 310 176 8 32 323 1 301 2.28e-46 168
Msa1448680 MtrunA17_Chr1g0178011 32.527 372 212 13 11 362 3 355 2.49e-44 167
Msa1448680 MtrunA17_Chr8g0356211 37.838 259 132 8 135 370 2 254 9.50e-43 158
Msa1448680 MtrunA17_Chr2g0277461 30.986 355 205 12 23 356 13 348 2.24e-38 149
Msa1448680 MtrunA17_Chr2g0289221 32.817 323 165 13 11 305 11 309 2.63e-36 141
Msa1448680 MtrunA17_Chr5g0424741 26.702 382 222 9 18 354 7 375 7.97e-32 131
Msa1448680 MtrunA17_Chr5g0417211 30.945 307 178 10 20 305 9 302 8.51e-32 129
Msa1448680 MtrunA17_Chr5g0425261 29.118 340 212 9 20 343 9 335 3.68e-31 126
Msa1448680 MtrunA17_Chr5g0424801 29.118 340 212 9 20 343 9 335 1.13e-30 125
Msa1448680 MtrunA17_Chr2g0277531 29.739 306 173 12 23 305 20 306 1.99e-27 114
Msa1448680 MtrunA17_Chr5g0425661 33.166 199 110 4 22 205 36 226 6.40e-26 107
Msa1448680 MtrunA17_Chr1g0156301 40.323 124 57 2 742 865 159 265 1.83e-19 89.4
Msa1448680 MtrunA17_Chr1g0156311 46.018 113 28 3 231 343 1 80 1.24e-14 70.1
Msa1448680 MtrunA17_Chr5g0424791 35.714 140 74 6 75 205 12 144 1.81e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448680 AT1G30330.1 84.189 487 54 7 1 470 1 481 0.0 812
Msa1448680 AT1G30330.3 83.845 489 54 8 1 470 1 483 0.0 808
Msa1448680 AT1G30330.2 83.845 489 54 8 1 470 1 483 0.0 808
Msa1448680 AT1G19850.1 41.530 915 421 27 13 869 43 901 0.0 558
Msa1448680 AT1G19850.2 41.530 915 421 27 13 869 32 890 0.0 558
Msa1448680 AT1G19220.1 57.143 504 165 15 1 469 1 488 1.18e-160 498
Msa1448680 AT1G19220.1 62.366 93 35 0 761 853 958 1050 1.43e-30 130
Msa1448680 AT5G20730.2 57.787 488 147 14 4 455 5 469 4.89e-155 486
Msa1448680 AT5G20730.3 57.669 489 147 15 4 455 5 470 1.96e-153 481
Msa1448680 AT5G20730.1 57.669 489 147 15 4 455 5 470 4.55e-153 481
Msa1448680 AT5G62000.2 49.373 399 160 9 3 362 17 412 2.11e-112 365
Msa1448680 AT5G62000.2 45.055 91 48 2 760 849 732 821 1.26e-16 85.5
Msa1448680 AT5G62000.5 49.373 399 160 9 3 362 17 412 2.11e-112 365
Msa1448680 AT5G62000.5 45.055 91 48 2 760 849 732 821 1.26e-16 85.5
Msa1448680 AT5G62000.3 49.373 399 160 9 3 362 17 412 2.11e-112 365
Msa1448680 AT5G62000.3 45.055 91 48 2 760 849 732 821 1.26e-16 85.5
Msa1448680 AT5G62000.1 49.373 399 160 9 3 362 17 412 2.11e-112 365
Msa1448680 AT5G62000.1 45.055 91 48 2 760 849 732 821 1.26e-16 85.5
Msa1448680 AT1G59750.4 52.033 369 154 8 19 369 18 381 2.12e-112 359
Msa1448680 AT1G59750.4 38.889 90 53 2 761 849 537 625 6.48e-14 76.3
Msa1448680 AT5G62000.4 49.373 399 160 9 3 362 17 412 2.24e-112 365
Msa1448680 AT5G62000.4 45.055 91 48 2 760 849 732 821 1.43e-16 85.1
Msa1448680 AT1G59750.2 52.033 369 154 8 19 369 18 381 3.13e-112 359
Msa1448680 AT1G59750.2 38.889 90 53 2 761 849 539 627 6.61e-14 76.3
Msa1448680 AT1G59750.1 52.033 369 154 8 19 369 18 381 3.43e-112 359
Msa1448680 AT1G59750.1 38.889 90 53 2 761 849 542 630 6.41e-14 76.3
Msa1448680 AT1G59750.3 52.033 369 154 8 19 369 18 381 3.43e-112 359
Msa1448680 AT1G59750.3 38.889 90 53 2 761 849 542 630 6.41e-14 76.3
Msa1448680 AT5G60450.2 49.354 387 159 10 14 368 32 413 1.67e-105 344
Msa1448680 AT5G60450.2 36.667 120 73 3 730 847 609 727 1.40e-17 88.2
Msa1448680 AT5G60450.1 50.132 379 152 10 22 368 64 437 8.95e-105 343
Msa1448680 AT5G60450.1 36.667 120 73 3 730 847 633 751 1.66e-17 88.2
Msa1448680 AT3G61830.1 51.009 347 148 9 20 350 22 362 2.25e-102 331
Msa1448680 AT3G61830.1 36.207 116 70 3 753 867 481 593 1.79e-12 71.6
Msa1448680 AT2G46530.1 50.000 350 154 8 20 354 18 361 7.74e-102 329
Msa1448680 AT2G46530.1 36.893 103 62 2 753 854 482 582 8.80e-13 72.4
Msa1448680 AT2G46530.3 50.000 350 154 8 20 354 39 382 1.81e-101 329
Msa1448680 AT2G46530.3 36.893 103 62 2 753 854 503 603 1.10e-12 72.4
Msa1448680 AT2G33860.1 43.959 389 172 9 23 378 54 429 2.96e-92 304
Msa1448680 AT4G23980.1 47.645 361 163 9 20 362 9 361 2.34e-91 303
Msa1448680 AT4G23980.1 30.457 197 119 7 668 860 441 623 1.29e-15 81.6
Msa1448680 AT4G23980.2 47.645 361 163 9 20 362 9 361 2.35e-91 303
Msa1448680 AT4G23980.2 30.457 197 119 7 668 860 439 621 1.28e-15 81.6
Msa1448680 AT3G61830.2 50.000 316 136 9 51 350 2 311 8.94e-87 288
Msa1448680 AT3G61830.2 36.207 116 70 3 753 867 430 542 1.65e-12 71.6
Msa1448680 AT1G34310.1 41.436 362 189 7 14 361 18 370 3.98e-78 266
Msa1448680 AT1G34310.1 37.805 82 48 2 760 840 510 589 8.03e-11 66.2
Msa1448680 AT1G34410.1 40.884 362 191 7 14 361 18 370 1.96e-77 264
Msa1448680 AT1G34410.1 37.079 89 53 2 760 847 510 596 4.04e-11 67.4
Msa1448680 AT1G35240.1 40.608 362 192 7 14 361 18 370 3.61e-76 260
Msa1448680 AT1G35240.1 38.636 88 51 2 761 847 497 582 2.90e-11 67.8
Msa1448680 AT1G35540.1 40.634 347 183 7 14 346 18 355 3.51e-75 258
Msa1448680 AT1G35540.1 38.889 90 52 2 761 849 510 597 1.13e-12 72.4
Msa1448680 AT1G35520.1 41.399 343 178 7 17 345 21 354 5.84e-74 254
Msa1448680 AT1G34170.1 41.329 346 176 9 17 345 19 354 4.38e-72 246
Msa1448680 AT1G34390.1 40.884 362 189 8 14 361 18 368 5.93e-72 249
Msa1448680 AT2G28350.2 37.002 427 186 15 16 374 3 414 1.42e-68 241
Msa1448680 AT2G28350.1 37.002 427 186 15 16 374 3 414 1.54e-68 242
Msa1448680 AT2G33860.2 47.426 272 122 5 127 378 2 272 3.88e-68 234
Msa1448680 AT2G46530.2 49.407 253 110 5 116 354 26 274 7.73e-68 235
Msa1448680 AT2G46530.2 36.893 103 62 2 753 854 395 495 6.50e-13 72.8
Msa1448680 AT4G30080.1 37.065 402 177 13 11 348 7 396 3.66e-65 232
Msa1448680 AT1G34170.2 38.150 346 161 8 17 345 19 328 2.22e-62 219
Msa1448680 AT1G34170.3 38.150 346 161 8 17 345 19 328 8.50e-62 219
Msa1448680 AT1G34170.3 38.636 88 51 2 763 849 435 520 1.99e-11 68.2
Msa1448680 AT1G77850.1 32.500 400 208 10 18 366 14 402 1.78e-47 179
Msa1448680 AT1G77850.2 32.500 400 208 10 18 366 14 402 2.62e-47 179
Msa1448680 AT5G37020.3 45.415 229 95 6 636 855 497 704 1.24e-42 167
Msa1448680 AT5G37020.1 45.415 229 95 6 636 855 592 799 2.01e-42 167
Msa1448680 AT1G43950.1 41.429 210 107 4 14 212 18 222 1.81e-41 152
Msa1448680 AT5G37020.2 42.574 202 86 6 636 828 592 772 7.31e-31 130

Find 293 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTTGGTATGCGTTTC+AGG 0.162161 tig0032298:+8003 Msa1448680:CDS
TAATGGGATGTCGAACTTTA+AGG 0.164117 tig0032298:+9736 Msa1448680:CDS
GATAATAATCAGCAGATTTC+TGG 0.177527 tig0032298:+9242 Msa1448680:CDS
TGCTCCCTTCTTGGTCTATT+GGG 0.181638 tig0032298:-9652 None:intergenic
GCGGATCATTGCTCCCTTCT+TGG 0.200523 tig0032298:-9661 None:intergenic
AGATCCTTCCAAACAGCTTC+TGG 0.207005 tig0032298:+8968 Msa1448680:CDS
TTGCTCCCTTCTTGGTCTAT+TGG 0.213710 tig0032298:-9653 None:intergenic
GAAAGAAGAAAGAGAATAAC+AGG 0.221134 tig0032298:+5252 Msa1448680:five_prime_UTR
AGAAGAAGAGAGTATGTTTA+AGG 0.222089 tig0032298:-4903 None:intergenic
GAAAAGAACCAATTGCTTCT+TGG 0.261328 tig0032298:+7690 Msa1448680:CDS
GGAGGTAAGCTTGGATAGTT+TGG 0.269119 tig0032298:-6551 None:intergenic
CTCTTAATTATCAAGGGATT+GGG 0.281845 tig0032298:+8838 Msa1448680:CDS
AAGGGATTGGGGTTAATTCT+TGG 0.291066 tig0032298:+8850 Msa1448680:CDS
AGTTGTAAGTAGATGCCTTT+TGG 0.291101 tig0032298:-7322 None:intergenic
TTGTTGCAGGTTTATAAATC+AGG 0.292598 tig0032298:+10035 Msa1448680:intron
GGAACCCAAGAGCTTGTTCT+TGG 0.317973 tig0032298:-9464 None:intergenic
TCATCTCTTCTAATGCATAA+TGG 0.318760 tig0032298:+9719 Msa1448680:CDS
TGTGGCTGCTACTGCACTTC+AGG 0.319159 tig0032298:+8929 Msa1448680:CDS
CAAATGGGCAACACTGGCCT+CGG 0.321097 tig0032298:+10410 Msa1448680:CDS
CGCCTTCCAGTCCGAACATT+CGG 0.321140 tig0032298:-10124 None:intergenic
AGAATAACAGGGTTGTTCTT+TGG 0.321705 tig0032298:+5264 Msa1448680:five_prime_UTR
TACATAGGAAATGTTGTTAA+TGG 0.322032 tig0032298:-8532 None:intergenic
CATCTCTTCTAATGCATAAT+GGG 0.330297 tig0032298:+9720 Msa1448680:CDS
CCCATTTGCTGCACTTCCTC+GGG 0.331529 tig0032298:-10395 None:intergenic
AGAATGGAACATGGGGTGTT+GGG 0.334181 tig0032298:+5082 Msa1448680:five_prime_UTR
GCCCATTTGCTGCACTTCCT+CGG 0.336731 tig0032298:-10396 None:intergenic
GAACAAACACATACCTTCTT+GGG 0.341095 tig0032298:-5434 None:intergenic
TTCTCCTTTGCACAGTATCA+TGG 0.346541 tig0032298:+9397 Msa1448680:CDS
GGCATGAAAGATGATGATTT+TGG 0.347577 tig0032298:+8765 Msa1448680:intron
CTGCCTCAGGTGGAGCAGTT+AGG 0.348006 tig0032298:+9566 Msa1448680:CDS
TTCTCCTCGGTGATGGCCCT+TGG 0.353839 tig0032298:+10210 Msa1448680:CDS
CTTGGAGTTCCCAGCTCTGC+TGG 0.355032 tig0032298:-6889 None:intergenic
TTAGATTTCTTGAATCTTGA+CGG 0.364706 tig0032298:-10493 None:intergenic
AAACTAATACTGTAACTATA+TGG 0.370007 tig0032298:+10672 Msa1448680:three_prime_UTR
GGGATGCATGAATTTACTAA+TGG 0.371761 tig0032298:+10842 Msa1448680:three_prime_UTR
TTAAAGCAGCGGTCCTGTTC+GGG 0.371765 tig0032298:-9025 None:intergenic
TGAACAAACACATACCTTCT+TGG 0.374610 tig0032298:-5435 None:intergenic
GGTGGATCCACTCCTCTCTT+CGG 0.375518 tig0032298:+9526 Msa1448680:CDS
AGAGAAAGAATCAGAAGTTA+AGG 0.376757 tig0032298:+4725 Msa1448680:five_prime_UTR
AGATACATGGGTACAATAAC+TGG 0.379364 tig0032298:+8218 Msa1448680:intron
TCTCTTAATTATCAAGGGAT+TGG 0.381630 tig0032298:+8837 Msa1448680:CDS
CAAGGAACCCAGAAGCTGTT+TGG 0.386898 tig0032298:-8976 None:intergenic
CTCTTGAGCAGGAGGCTGTT+GGG 0.387165 tig0032298:-7108 None:intergenic
CCTGGATTGCCTTCGTTCCA+TGG 0.388608 tig0032298:+8595 Msa1448680:CDS
GTTGAGTTTGTTGTTGCTGC+TGG 0.388634 tig0032298:-9208 None:intergenic
GGCCTTTCAAAATAATAATC+AGG 0.388931 tig0032298:+9085 Msa1448680:CDS
GTGGATCCACTCCTCTCTTC+GGG 0.390379 tig0032298:+9527 Msa1448680:CDS
CTCTTGCAGGCCAGCCCAAA+AGG 0.390511 tig0032298:+7307 Msa1448680:intron
AGACTAAAAGTAATGAAGTT+TGG 0.391711 tig0032298:-10798 None:intergenic
CCATGGAACGAAGGCAATCC+AGG 0.392004 tig0032298:-8595 None:intergenic
CTATTTGAGAGCCTTTGAAT+TGG 0.393125 tig0032298:-10449 None:intergenic
CTTCAATCTCTTAATTATCA+AGG 0.393969 tig0032298:+8831 Msa1448680:CDS
GGCTTACCTTCCAGCAGAGC+TGG 0.397404 tig0032298:+6879 Msa1448680:CDS
AGTGAGCTCGCCCGAATGTT+CGG 0.398934 tig0032298:+10113 Msa1448680:CDS
TCATGTAATTAGAAGATTGA+TGG 0.401440 tig0032298:-9799 None:intergenic
GCCCGAGGAAGTGCAGCAAA+TGG 0.402215 tig0032298:+10394 Msa1448680:CDS
AAGAATGGAACATGGGGTGT+TGG 0.403532 tig0032298:+5081 Msa1448680:five_prime_UTR
GACTTGGATCGCAGGTTGGT+TGG 0.404773 tig0032298:+8455 Msa1448680:intron
GAGGTAAGCTTGGATAGTTT+GGG 0.407695 tig0032298:-6550 None:intergenic
CACTCTAGGTTGCCTTTCTC+CGG 0.408251 tig0032298:-8491 None:intergenic
GTCTTCCAAGAACAAGCTCT+TGG 0.413478 tig0032298:+9459 Msa1448680:CDS
GCAACAGTCGCAGCCTCAAC+AGG 0.414241 tig0032298:+9064 Msa1448680:CDS
ATTACATTGCCACCGTTTCC+TGG 0.415341 tig0032298:+9620 Msa1448680:CDS
CTTGTCTCTTTGCCAGCAGT+TGG 0.417884 tig0032298:+6039 Msa1448680:CDS
ATTAAAGCAGCGGTCCTGTT+CGG 0.418907 tig0032298:-9026 None:intergenic
GGGATTCTCCGTGCCTCGCC+GGG 0.419026 tig0032298:+6972 Msa1448680:CDS
CCAATGAGACTCTCTTCAGC+TGG 0.421483 tig0032298:+5397 Msa1448680:exon
TTCTTGCATACCCAGGAAAA+CGG 0.422042 tig0032298:+9884 Msa1448680:CDS
TCACGATTGAATTGATTGTT+TGG 0.425320 tig0032298:+10896 Msa1448680:three_prime_UTR
TAGTTTGTCGGCTGTTTACT+TGG 0.426749 tig0032298:-6907 None:intergenic
CTTAAACGACCGTGGCCTCC+TGG 0.428239 tig0032298:+8577 Msa1448680:CDS
ATCCGTCACCATTCCCTCTC+AGG 0.433049 tig0032298:+8554 Msa1448680:CDS
TGCCTCAGGTGGAGCAGTTA+GGG 0.438031 tig0032298:+9567 Msa1448680:CDS
TAATCAGCAGATTTCTGGTT+CGG 0.438677 tig0032298:+9247 Msa1448680:CDS
GCCTTCCAGTCCGAACATTC+GGG 0.438695 tig0032298:-10123 None:intergenic
TCTTGCATACCCAGGAAAAC+GGG 0.442241 tig0032298:+9885 Msa1448680:CDS
GTTCCTGTTCAAAATTCAAC+TGG 0.442615 tig0032298:+9482 Msa1448680:CDS
CCAGCTGAAGAGAGTCTCAT+TGG 0.442653 tig0032298:-5397 None:intergenic
CGCCAAGGGTATGACAAATT+CGG 0.445368 tig0032298:-7949 None:intergenic
AAAAGGCATCTACTTACAAC+TGG 0.447091 tig0032298:+7324 Msa1448680:CDS
GAAAATAGTGAAACGGCTAT+TGG 0.448976 tig0032298:-7817 None:intergenic
AACCACCGAACTTCCCGAAC+AGG 0.449860 tig0032298:+9012 Msa1448680:CDS
GATCCTTCCAAACAGCTTCT+GGG 0.451775 tig0032298:+8969 Msa1448680:CDS
GCGGTCCTGTTCGGGAAGTT+CGG 0.455221 tig0032298:-9017 None:intergenic
AGCCACAGCTTGATACATAT+CGG 0.455527 tig0032298:-8913 None:intergenic
TCTCCTTTGCACAGTATCAT+GGG 0.455578 tig0032298:+9398 Msa1448680:CDS
ACTTGGATCGCAGGTTGGTT+GGG 0.456236 tig0032298:+8456 Msa1448680:intron
GGCAACCTAGAGTGTCTTTG+TGG 0.458141 tig0032298:+8500 Msa1448680:CDS
GCTGATTCTTCGTTGAATCA+TGG 0.461747 tig0032298:+9833 Msa1448680:CDS
AAATGGGCAACACTGGCCTC+GGG 0.462909 tig0032298:+10411 Msa1448680:CDS
CATGGAGTAACGCCTGGTAT+TGG 0.463985 tig0032298:+9851 Msa1448680:CDS
GTTTATAAATCAGGGTCCTT+CGG 0.465594 tig0032298:+10044 Msa1448680:CDS
TTGGAGGACCCTGTGAGATC+AGG 0.467149 tig0032298:+10149 Msa1448680:CDS
GAACTTTGGCATGCATGTGC+TGG 0.467783 tig0032298:+6012 Msa1448680:CDS
TGCATGGGTGGTGGTGATTG+AGG 0.469546 tig0032298:-9305 None:intergenic
ATCTCAATGTATTCTGCCTC+AGG 0.469855 tig0032298:+9553 Msa1448680:CDS
AGGTTGCCTTTCTCCGGCAG+TGG 0.470273 tig0032298:-8485 None:intergenic
GTCTTGCAAAAGTAGTTTGT+CGG 0.474515 tig0032298:-6919 None:intergenic
GGGGATTCTCCGTGCCTCGC+CGG 0.474560 tig0032298:+6971 Msa1448680:CDS
ACCCAGGAAAACGGGGATCA+AGG 0.476331 tig0032298:+9893 Msa1448680:CDS
TTCAGCCGCCCGGCGAGGCA+CGG 0.476974 tig0032298:-6980 None:intergenic
TCTTCCAAGAACAAGCTCTT+GGG 0.477287 tig0032298:+9460 Msa1448680:CDS
ATAAGCTGAGGAGGTAAGCT+TGG 0.477482 tig0032298:-6560 None:intergenic
CCGAATAAAAGATTACTTTG+CGG 0.478680 tig0032298:-9680 None:intergenic
TATACAATACTTAATCCGTT+AGG 0.481606 tig0032298:+10723 Msa1448680:three_prime_UTR
ATCCGAATTTGTCATACCCT+TGG 0.484834 tig0032298:+7947 Msa1448680:CDS
ATTGCCACCGTTTCCTGGTA+GGG 0.485104 tig0032298:+9625 Msa1448680:CDS
GAGTTCTAGATTCAGAACTT+TGG 0.485224 tig0032298:+5998 Msa1448680:CDS
GAATGGAACATGGGGTGTTG+GGG 0.486087 tig0032298:+5083 Msa1448680:five_prime_UTR
CCCGAGGAAGTGCAGCAAAT+GGG 0.486695 tig0032298:+10395 Msa1448680:CDS
AATGGGATGTCGAACTTTAA+GGG 0.487362 tig0032298:+9737 Msa1448680:CDS
GAGGAAGGCATCACAGTTTG+TGG 0.487690 tig0032298:-7732 None:intergenic
TTGTTCTTGGAAGACTCATA+AGG 0.488411 tig0032298:-9451 None:intergenic
CGACAAATATTTACCAAAGG+AGG 0.491583 tig0032298:-7012 None:intergenic
ACTCTTGAGCAGGAGGCTGT+TGG 0.493884 tig0032298:-7109 None:intergenic
CTCACATTGGCGCTCGGTAA+AGG 0.494139 tig0032298:+8274 Msa1448680:CDS
TTCAATCTCTTAATTATCAA+GGG 0.495099 tig0032298:+8832 Msa1448680:CDS
TCTCTCTTCATTATGCCATC+AGG 0.495439 tig0032298:+9331 Msa1448680:CDS
AAGAGAGTATGTTTAAGGAA+AGG 0.497813 tig0032298:-4898 None:intergenic
GCATGAATTCTCCTTTGTTG+TGG 0.501682 tig0032298:+8787 Msa1448680:CDS
ATGTGCATCGACTTCCTTGT+TGG 0.502862 tig0032298:-6525 None:intergenic
ATGAATCCACTGCCGGAGAA+AGG 0.504170 tig0032298:+8479 Msa1448680:CDS
TCTATTGGGCACTCCCTACC+AGG 0.505062 tig0032298:-9638 None:intergenic
TGAACTCGGTTCCAATTCAA+AGG 0.505743 tig0032298:+10438 Msa1448680:CDS
AGCTGCCAGCCTGATCTCAC+AGG 0.506041 tig0032298:-10158 None:intergenic
GATGTTCTTCTCCTCGGTGA+TGG 0.506215 tig0032298:+10203 Msa1448680:CDS
TGGCTCCGAGACACGGATAG+AGG 0.506451 tig0032298:+8807 Msa1448680:CDS
CGTTTAAGCCTGAGAGGGAA+TGG 0.506571 tig0032298:-8562 None:intergenic
CAGTTTGTGGTCTGCTAGCA+CGG 0.509265 tig0032298:-7719 None:intergenic
CACATACCTTCTTGGGGTGG+AGG 0.510763 tig0032298:-5427 None:intergenic
CTAGTGACACAAGCACTCAC+GGG 0.513763 tig0032298:+6950 Msa1448680:CDS
CAGGACCGCTGCTTTAATGC+AGG 0.514239 tig0032298:+9031 Msa1448680:CDS
TGCCCTAACTGCTCCACCTG+AGG 0.514830 tig0032298:-9569 None:intergenic
TAATGAAGAGAGAGCTTGCA+TGG 0.515214 tig0032298:-9321 None:intergenic
AGTGCTAAAAGACTTGTTGC+TGG 0.517965 tig0032298:+7363 Msa1448680:CDS
AATAACTGGCATTTGTGACC+TGG 0.518852 tig0032298:+8232 Msa1448680:CDS
CTTGCTATTAACTCTTGAGC+AGG 0.523192 tig0032298:-7119 None:intergenic
CTGTTCAAAATTCAACTGGT+TGG 0.523694 tig0032298:+9486 Msa1448680:CDS
TTCACAAAGGTCTTGTTCAG+TGG 0.523923 tig0032298:-9923 None:intergenic
TCTGCCACCGGACAGAATCC+AGG 0.524242 tig0032298:-8250 None:intergenic
GGCGGATACCAAGAAGCAAT+TGG 0.526575 tig0032298:-7698 None:intergenic
GTGCAGCAAATGGGCAACAC+TGG 0.528727 tig0032298:+10404 Msa1448680:CDS
CATTGCCACCGTTTCCTGGT+AGG 0.529441 tig0032298:+9624 Msa1448680:CDS
TGTTGCAGGTTTATAAATCA+GGG 0.529690 tig0032298:+10036 Msa1448680:intron
ATAACAGGGTTGTTCTTTGG+TGG 0.529883 tig0032298:+5267 Msa1448680:five_prime_UTR
TAACAGGGTTGTTCTTTGGT+GGG 0.530856 tig0032298:+5268 Msa1448680:five_prime_UTR
GTTCGGACTGGAAGGCGAGT+TGG 0.531084 tig0032298:+10130 Msa1448680:CDS
GTCAAGTGATAGTATGCACT+TGG 0.531718 tig0032298:+7761 Msa1448680:CDS
TCACAAAGGTCTTGTTCAGT+GGG 0.532882 tig0032298:-9922 None:intergenic
GCCGTCGAAGCGCATTGCGG+TGG 0.532901 tig0032298:+9508 Msa1448680:CDS
TCTTGCTGCAGCAGCTCATG+CGG 0.533897 tig0032298:+7788 Msa1448680:CDS
GGGAATTCGTGAATAGTGTA+TGG 0.534696 tig0032298:+10354 Msa1448680:intron
TTAATTCTTGGATGCAGCCA+AGG 0.534781 tig0032298:+8862 Msa1448680:CDS
ATTCAAGAAATCTAAGCAGC+GGG 0.537502 tig0032298:+10501 Msa1448680:CDS
TTGAATCATGGAGTAACGCC+TGG 0.538445 tig0032298:+9845 Msa1448680:CDS
TCCTGGGTATGCAAGAAACC+AGG 0.538483 tig0032298:-9878 None:intergenic
GAGAATGATGTTCTTCTCCT+CGG 0.539898 tig0032298:+10197 Msa1448680:CDS
ACGCCTGGTATTGGTGAACC+TGG 0.541034 tig0032298:+9860 Msa1448680:CDS
GCCCGAATGTTCGGACTGGA+AGG 0.541412 tig0032298:+10122 Msa1448680:CDS
TCAGGTGGAGCAGTTAGGGC+AGG 0.541919 tig0032298:+9571 Msa1448680:CDS
TCCACCGCAATGCGCTTCGA+CGG 0.542911 tig0032298:-9509 None:intergenic
GGCATCTACTTACAACTGGA+TGG 0.547248 tig0032298:+7328 Msa1448680:CDS
CAGGATGCTCTTTGAAACAG+AGG 0.547415 tig0032298:+8022 Msa1448680:CDS
GGTTATAGAAAATAGTGAAA+CGG 0.547772 tig0032298:-7824 None:intergenic
TGAAGCGTGTAGTTGAAGAA+TGG 0.548119 tig0032298:+5066 Msa1448680:five_prime_UTR
GTTTGCATATTAAGCATGGC+GGG 0.548627 tig0032298:-8891 None:intergenic
GAAGGCAATCCAGGAGGCCA+CGG 0.550715 tig0032298:-8586 None:intergenic
TCTTAATTATCAAGGGATTG+GGG 0.550737 tig0032298:+8839 Msa1448680:CDS
GCTAGTGACACAAGCACTCA+CGG 0.551619 tig0032298:+6949 Msa1448680:CDS
ATTTCCCACAAAGACACTCT+AGG 0.551924 tig0032298:-8505 None:intergenic
GGGCACTCCCTACCAGGAAA+CGG 0.553138 tig0032298:-9632 None:intergenic
GGGAATGGTGACGGATACAT+AGG 0.554939 tig0032298:-8547 None:intergenic
GCAACCTAGAGTGTCTTTGT+GGG 0.555847 tig0032298:+8501 Msa1448680:CDS
GCTTGTGTCACTAGCAGTCA+AGG 0.559088 tig0032298:-6941 None:intergenic
AGGGTCCTTCGGAAGATCGT+TGG 0.562529 tig0032298:+10055 Msa1448680:CDS
TTTGTGACCTGGATTCTGTC+CGG 0.562740 tig0032298:+8243 Msa1448680:CDS
ATCGGTTTGCATATTAAGCA+TGG 0.564195 tig0032298:-8895 None:intergenic
GAGTGCCCAATAGACCAAGA+AGG 0.564439 tig0032298:+9647 Msa1448680:CDS
ATTGAAGTACAGTAGTAACT+TGG 0.565444 tig0032298:-4763 None:intergenic
TTTGTTGTGGCTCCGAGACA+CGG 0.566247 tig0032298:+8800 Msa1448680:CDS
TTCACACATTGATTTCCTAA+CGG 0.567464 tig0032298:-10738 None:intergenic
GCTTACCTTCCAGCAGAGCT+GGG 0.567684 tig0032298:+6880 Msa1448680:CDS
TTGATGGTAGGACATGGTTG+AGG 0.567713 tig0032298:-9783 None:intergenic
AATGGAACATGGGGTGTTGG+GGG 0.571152 tig0032298:+5084 Msa1448680:five_prime_UTR
TTAGTAGTCTAGAGATCCCA+CGG 0.572139 tig0032298:-10531 None:intergenic
TGCTCAAGAGTTAATAGCAA+GGG 0.572218 tig0032298:+7121 Msa1448680:CDS
GAAGCCCTCTATCCGTGTCT+CGG 0.572260 tig0032298:-8812 None:intergenic
ACAACTCTACTTCCAACTGC+TGG 0.574124 tig0032298:-6051 None:intergenic
CGGACTGGAAGGCGAGTTGG+AGG 0.574126 tig0032298:+10133 Msa1448680:CDS
TTTAGTCCTCCACCCCAAGA+AGG 0.575086 tig0032298:+5421 Msa1448680:CDS
TTCTTGGAAGACTCATAAGG+TGG 0.575295 tig0032298:-9448 None:intergenic
ACTTGTTCACTGTGACCTTG+TGG 0.575829 tig0032298:-6081 None:intergenic
TACAGCATTCAGAGGTTGCA+AGG 0.577363 tig0032298:-6756 None:intergenic
ATATGGGATACTTACGGCCA+AGG 0.577394 tig0032298:-10227 None:intergenic
TATGGGATACTTACGGCCAA+GGG 0.577771 tig0032298:-10226 None:intergenic
GGAGAAGAACATCATTCTCT+CGG 0.577950 tig0032298:-10193 None:intergenic
GTCCTGTTCGGGAAGTTCGG+TGG 0.578597 tig0032298:-9014 None:intergenic
GCCAATGTGAGTTCTGCCAC+CGG 0.579314 tig0032298:-8262 None:intergenic
AGTGCCCAATAGACCAAGAA+GGG 0.582142 tig0032298:+9648 Msa1448680:CDS
TATCATACTCGAGTTTCAGT+TGG 0.582440 tig0032298:+7990 Msa1448680:CDS
AGCTTTAACATACTTCGCCA+AGG 0.582602 tig0032298:-7964 None:intergenic
TGAGGATTAGTCTGAGCTTG+TGG 0.584983 tig0032298:-9134 None:intergenic
GAACCCAGAAGCTGTTTGGA+AGG 0.588893 tig0032298:-8972 None:intergenic
ACCTGGTTTCTTGCATACCC+AGG 0.589141 tig0032298:+9877 Msa1448680:CDS
GTTGCTGCTGGTTATGATGA+CGG 0.589209 tig0032298:-9196 None:intergenic
GGTTGGGATGAATCCACTGC+CGG 0.589399 tig0032298:+8472 Msa1448680:CDS
GCAGAACTCACATTGGCGCT+CGG 0.590336 tig0032298:+8268 Msa1448680:CDS
GCTCGCCCGAATGTTCGGAC+TGG 0.591896 tig0032298:+10118 Msa1448680:CDS
AAAAGAAAACAAAACCCAGA+AGG 0.591987 tig0032298:-5001 None:intergenic
ATTATGCATTAGAAGAGATG+AGG 0.592095 tig0032298:-9717 None:intergenic
GCTATTAACTCTTGAGCAGG+AGG 0.592105 tig0032298:-7116 None:intergenic
AGCATGGCGGGATCAAACCT+TGG 0.593115 tig0032298:-8879 None:intergenic
TCTAATTACATGAACACCAC+AGG 0.594162 tig0032298:+9809 Msa1448680:CDS
ATTCAATCGTGACACATCAA+AGG 0.595154 tig0032298:-10885 None:intergenic
TGATGCTGTAGATGCTGTTG+AGG 0.596375 tig0032298:-9152 None:intergenic
ATGGGATGTCGAACTTTAAG+GGG 0.597378 tig0032298:+9738 Msa1448680:CDS
GAGTTCCCAGCTCTGCTGGA+AGG 0.598003 tig0032298:-6885 None:intergenic
TCAATGTATTCTGCCTCAGG+TGG 0.598371 tig0032298:+9556 Msa1448680:CDS
ATTGAGATGCTCCCGAAGAG+AGG 0.602086 tig0032298:-9538 None:intergenic
AGCCTGAGAGGGAATGGTGA+CGG 0.604684 tig0032298:-8556 None:intergenic
TGTAGTTGAAGAATGGAACA+TGG 0.612502 tig0032298:+5073 Msa1448680:five_prime_UTR
GGCTCCGAGACACGGATAGA+GGG 0.613419 tig0032298:+8808 Msa1448680:CDS
TTATGCATTAGAAGAGATGA+GGG 0.615668 tig0032298:-9716 None:intergenic
GATTCAAGAAATCTAAGCAG+CGG 0.616289 tig0032298:+10500 Msa1448680:CDS
GAGAGAGCTTGCATGGGTGG+TGG 0.617938 tig0032298:-9314 None:intergenic
AGTTGACAAATAAGCTGAGG+AGG 0.618727 tig0032298:-6569 None:intergenic
ACAACAAACTCAACAGCAAG+TGG 0.620384 tig0032298:+9217 Msa1448680:CDS
AAACCAGGTTCACCAATACC+AGG 0.622204 tig0032298:-9863 None:intergenic
CACGGTCGTTTAAGCCTGAG+AGG 0.624256 tig0032298:-8568 None:intergenic
GCTTTAACATACTTCGCCAA+GGG 0.624647 tig0032298:-7963 None:intergenic
GTAATTAGAAGATTGATGGT+AGG 0.628481 tig0032298:-9795 None:intergenic
CTGCGCCTGCATTAAAGCAG+CGG 0.630823 tig0032298:-9036 None:intergenic
TCTTGGAAGACTCATAAGGT+GGG 0.631001 tig0032298:-9447 None:intergenic
AAGGGTATGACAAATTCGGA+TGG 0.631171 tig0032298:-7945 None:intergenic
AGGACCCTGTGAGATCAGGC+TGG 0.632061 tig0032298:+10153 Msa1448680:CDS
ACAAACTCAACAGCAAGTGG+TGG 0.632664 tig0032298:+9220 Msa1448680:CDS
CTACTGCACTTCAGGACATG+AGG 0.633304 tig0032298:+8937 Msa1448680:CDS
CAACGAAGAATCAGCACCTG+TGG 0.634227 tig0032298:-9825 None:intergenic
GAAGAGAGAGCTTGCATGGG+TGG 0.634269 tig0032298:-9317 None:intergenic
CTTGCATACCCAGGAAAACG+GGG 0.635833 tig0032298:+9886 Msa1448680:CDS
CTCTCAGGCTTAAACGACCG+TGG 0.637655 tig0032298:+8569 Msa1448680:CDS
AGAAGATTGATGGTAGGACA+TGG 0.637666 tig0032298:-9789 None:intergenic
TCGAACTTTAAGGGGATCAG+TGG 0.638766 tig0032298:+9746 Msa1448680:CDS
AACAAACACATACCTTCTTG+GGG 0.638829 tig0032298:-5433 None:intergenic
CTTAAGAAAAGAAAAGTGAA+CGG 0.638881 tig0032298:-4934 None:intergenic
CTGCTCAAGAGTTAATAGCA+AGG 0.640223 tig0032298:+7120 Msa1448680:CDS
AGGTGGGATGATTCATCATG+CGG 0.640255 tig0032298:-9431 None:intergenic
TTGGCCGTCGAAGCGCATTG+CGG 0.640591 tig0032298:+9505 Msa1448680:CDS
TAGTGACACAAGCACTCACG+GGG 0.641025 tig0032298:+6951 Msa1448680:CDS
AGGAAAATTCACCTTCACAA+AGG 0.641819 tig0032298:-9936 None:intergenic
TCCGGTGGCAGAACTCACAT+TGG 0.642216 tig0032298:+8261 Msa1448680:CDS
GGTGGCTGTGTCAACCAACA+AGG 0.642632 tig0032298:+6511 Msa1448680:intron
CATCTGCGCATACACCTCAT+CGG 0.644319 tig0032298:-6732 None:intergenic
TTAATAGCAAGGGATTTGCA+TGG 0.646026 tig0032298:+7131 Msa1448680:CDS
TCACTTGACAGTACTGAGGA+AGG 0.646608 tig0032298:-7747 None:intergenic
AAGGAGAAGAAGAATCAATG+AGG 0.650939 tig0032298:+5109 Msa1448680:five_prime_UTR
AAACACATACCTTCTTGGGG+TGG 0.651129 tig0032298:-5430 None:intergenic
TGGTTGCTGAAATTGAAGCA+AGG 0.651942 tig0032298:-8994 None:intergenic
AATGAAGAGAGAGCTTGCAT+GGG 0.652076 tig0032298:-9320 None:intergenic
CACTCCCTACCAGGAAACGG+TGG 0.655637 tig0032298:-9629 None:intergenic
TGAAGTTGACAAATAAGCTG+AGG 0.655755 tig0032298:-6572 None:intergenic
CATCAAGATACTTTCGCCCG+AGG 0.658329 tig0032298:+10379 Msa1448680:CDS
GTGTGTCATACAGCATTCAG+AGG 0.660186 tig0032298:-6764 None:intergenic
TGAAGCTAACCATGGAACGA+AGG 0.660506 tig0032298:-8604 None:intergenic
GATGCTCCCGAAGAGAGGAG+TGG 0.661943 tig0032298:-9533 None:intergenic
GTGACCTGGATTCTGTCCGG+TGG 0.662152 tig0032298:+8246 Msa1448680:CDS
CAGAGGAGTCTAGTGTGCGA+CGG 0.670121 tig0032298:+8039 Msa1448680:CDS
GAACCCATGATACTGTGCAA+AGG 0.670731 tig0032298:-9401 None:intergenic
ACTGCTGGCAAAGAGACAAG+AGG 0.671615 tig0032298:-6036 None:intergenic
GCTGCCAGCCTGATCTCACA+GGG 0.673300 tig0032298:-10157 None:intergenic
ACTGAACAAGACCTTTGTGA+AGG 0.673840 tig0032298:+9925 Msa1448680:CDS
CTGCTGGCAAAGAGACAAGA+GGG 0.675164 tig0032298:-6035 None:intergenic
GTAGTTGAAGAATGGAACAT+GGG 0.675713 tig0032298:+5074 Msa1448680:five_prime_UTR
AAAGAAGAAAGAGAATAACA+GGG 0.675784 tig0032298:+5253 Msa1448680:five_prime_UTR
GTGTCTCGGAGCCACAACAA+AGG 0.677037 tig0032298:-8798 None:intergenic
AAGCAGCGGGATAACAACCG+TGG 0.677360 tig0032298:+10514 Msa1448680:CDS
GATATCCAACGATCTTCCGA+AGG 0.678418 tig0032298:-10060 None:intergenic
ACGGTCGTTTAAGCCTGAGA+GGG 0.680503 tig0032298:-8567 None:intergenic
AGCAGCGGGATAACAACCGT+GGG 0.682119 tig0032298:+10515 Msa1448680:CDS
GGCTGACGTGGAGACCGATG+AGG 0.686878 tig0032298:+6718 Msa1448680:intron
ATTCTCCGTGCCTCGCCGGG+CGG 0.687655 tig0032298:+6975 Msa1448680:CDS
AACCGATATGTATCAAGCTG+TGG 0.692664 tig0032298:+8911 Msa1448680:CDS
GAACCGAGTTCAAAAGCCCG+AGG 0.695574 tig0032298:-10427 None:intergenic
AGAGTTGTGTACTTTCCACA+AGG 0.698507 tig0032298:+6066 Msa1448680:CDS
ACGGCCAAGGGCCATCACCG+AGG 0.706646 tig0032298:-10214 None:intergenic
GGTTTGCATATTAAGCATGG+CGG 0.708185 tig0032298:-8892 None:intergenic
TCAAGTGATAGTATGCACTT+GGG 0.709086 tig0032298:+7762 Msa1448680:CDS
ACTATCACTTGACAGTACTG+AGG 0.709379 tig0032298:-7751 None:intergenic
TGCTGGTTATGATGACGGAG+TGG 0.738797 tig0032298:-9191 None:intergenic
TGGAACGAAGGCAATCCAGG+AGG 0.743475 tig0032298:-8592 None:intergenic
TTTGTGGTCTGCTAGCACGG+CGG 0.758571 tig0032298:-7716 None:intergenic
TAGTTGAAGAATGGAACATG+GGG 0.764762 tig0032298:+5075 Msa1448680:five_prime_UTR
AGTGACACAAGCACTCACGG+GGG 0.846522 tig0032298:+6952 Msa1448680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTTTTTTGAAG+TGG + tig0032298:5762-5781 Msa1448680:intron 10.0%
!!! TTTACTTTTGTTTTAAATTT+CGG + tig0032298:6289-6308 Msa1448680:intron 10.0%
!! TTTATTGCTAATTTAATCTT+TGG + tig0032298:5643-5662 Msa1448680:intron 15.0%
!! TTATTGCTAATTTAATCTTT+GGG + tig0032298:5644-5663 Msa1448680:intron 15.0%
!!! TTTTTATAATACATGACATT+GGG + tig0032298:5953-5972 Msa1448680:intron 15.0%
!! TCATAAATTATACTTCAAAA+AGG - tig0032298:8370-8389 None:intergenic 15.0%
!! ATTTAGCATTAAAAAGAAAA+AGG - tig0032298:10264-10283 None:intergenic 15.0%
!!! TTTTCTTTTTAATGCTAAAT+TGG + tig0032298:10264-10283 Msa1448680:intron 15.0%
!! AACATGTAAACAAAAATAAA+AGG - tig0032298:10631-10650 None:intergenic 15.0%
!!! TAAGATTTTAACCAGTTTTT+TGG + tig0032298:5181-5200 Msa1448680:five_prime_UTR 20.0%
!! AAAGATAGATGAAAAGAAAA+AGG - tig0032298:5490-5509 None:intergenic 20.0%
!!! TTGTTATTGCTACATTTTTT+TGG + tig0032298:5534-5553 Msa1448680:intron 20.0%
!!! TGTTATTGCTACATTTTTTT+GGG + tig0032298:5535-5554 Msa1448680:intron 20.0%
!! TATTGCTAATTTAATCTTTG+GGG + tig0032298:5645-5664 Msa1448680:intron 20.0%
!!! TTTTTGTTATCTAACATGAA+GGG + tig0032298:5718-5737 Msa1448680:intron 20.0%
!!! ATTATTTTTTTTTGAAGTGG+AGG + tig0032298:5765-5784 Msa1448680:intron 20.0%
!!! GTTTTTATAATACATGACAT+TGG + tig0032298:5952-5971 Msa1448680:intron 20.0%
!! AGTAAGAATAAAGTAATACT+AGG + tig0032298:6208-6227 Msa1448680:intron 20.0%
!! AACAAAAGTAAAAACAGAAA+AGG - tig0032298:6281-6300 None:intergenic 20.0%
!! CGTCAAAATCTTTAATAATT+CGG + tig0032298:6315-6334 Msa1448680:intron 20.0%
!!! TATAATTTTTTATCTCTTGC+AGG + tig0032298:7294-7313 Msa1448680:intron 20.0%
!!! TAAGAATGTTTTAGTATTGA+AGG - tig0032298:7507-7526 None:intergenic 20.0%
!! ATTATGTGATATCTTATCAA+TGG + tig0032298:7635-7654 Msa1448680:intron 20.0%
!!! AAATGCTTTAGTTTTTTATG+TGG + tig0032298:8100-8119 Msa1448680:intron 20.0%
!! TTCAATCTCTTAATTATCAA+GGG + tig0032298:8832-8851 Msa1448680:CDS 20.0%
!!! TAATAGTCTGCATTTTTTTA+TGG + tig0032298:10567-10586 Msa1448680:three_prime_UTR 20.0%
!!! AATAGTCTGCATTTTTTTAT+GGG + tig0032298:10568-10587 Msa1448680:three_prime_UTR 20.0%
!! AAACTAATACTGTAACTATA+TGG + tig0032298:10672-10691 Msa1448680:three_prime_UTR 20.0%
! AAAAATGAGATGAGAAACAA+TGG - tig0032298:4825-4844 None:intergenic 25.0%
! ATGTTTAAGGAAAGGAAAAA+TGG - tig0032298:4893-4912 None:intergenic 25.0%
! CTTAAGAAAAGAAAAGTGAA+CGG - tig0032298:4937-4956 None:intergenic 25.0%
!!! TTTTTCATTTTTCACCTTCT+GGG + tig0032298:4987-5006 Msa1448680:five_prime_UTR 25.0%
!!! ATTGTTTTTTGTTGTGAAAC+TGG + tig0032298:5141-5160 Msa1448680:five_prime_UTR 25.0%
!!! ATTTTAACCAGTTTTTTGGT+TGG + tig0032298:5185-5204 Msa1448680:five_prime_UTR 25.0%
! AAAGAAGAAAGAGAATAACA+GGG + tig0032298:5253-5272 Msa1448680:five_prime_UTR 25.0%
! TTCAAGAAAAATTGTGAACA+AGG - tig0032298:5513-5532 None:intergenic 25.0%
!!! AGACAATTTTTATTTACCTC+TGG - tig0032298:5582-5601 None:intergenic 25.0%
! AGGTAAATAAAAATTGTCTC+TGG + tig0032298:5583-5602 Msa1448680:intron 25.0%
! ATTGCTAATTTAATCTTTGG+GGG + tig0032298:5646-5665 Msa1448680:intron 25.0%
!!! GTTTTTGTTATCTAACATGA+AGG + tig0032298:5717-5736 Msa1448680:intron 25.0%
!! GATGTGAAAATTCATCTTTT+GGG + tig0032298:5787-5806 Msa1448680:intron 25.0%
! TAGTAAATCCAAGATCTTAA+AGG - tig0032298:5889-5908 None:intergenic 25.0%
! ACAAAGGACAAATTGATTAT+GGG - tig0032298:5920-5939 None:intergenic 25.0%
!!! GCTTTAAAAATAATGGTCTA+CGG - tig0032298:6425-6444 None:intergenic 25.0%
!!! GAGAGATGCTTTAAAAATAA+TGG - tig0032298:6432-6451 None:intergenic 25.0%
! TTTCGACAAATATTTACCAA+AGG - tig0032298:7018-7037 None:intergenic 25.0%
! TTCACTTTAATTGCAAATGT+CGG + tig0032298:7205-7224 Msa1448680:intron 25.0%
! AGGAATAGAACAAATTAATG+AGG - tig0032298:7465-7484 None:intergenic 25.0%
! GGTTATAGAAAATAGTGAAA+CGG - tig0032298:7827-7846 None:intergenic 25.0%
! TCTGTGCAAGAAAAATATAT+TGG - tig0032298:8201-8220 None:intergenic 25.0%
!! TCAATGTAAAGGTATAACTT+GGG - tig0032298:8336-8355 None:intergenic 25.0%
! ATTATACTTCAAAAAGGCAA+GGG - tig0032298:8364-8383 None:intergenic 25.0%
! AATTATACTTCAAAAAGGCA+AGG - tig0032298:8365-8384 None:intergenic 25.0%
! TACATAGGAAATGTTGTTAA+TGG - tig0032298:8535-8554 None:intergenic 25.0%
! CTTCAATCTCTTAATTATCA+AGG + tig0032298:8831-8850 Msa1448680:CDS 25.0%
!!! CTCCTGATTATTATTTTGAA+AGG - tig0032298:9090-9109 None:intergenic 25.0%
! TCATGTAATTAGAAGATTGA+TGG - tig0032298:9802-9821 None:intergenic 25.0%
!! ACCACTTCTTACATTTTATT+TGG + tig0032298:10004-10023 Msa1448680:intron 25.0%
! ACCAAATAAAATGTAAGAAG+TGG - tig0032298:10008-10027 None:intergenic 25.0%
! AAAGGAAGAAAGTAGAATAT+GGG - tig0032298:10246-10265 None:intergenic 25.0%
! AAAAGGAAGAAAGTAGAATA+TGG - tig0032298:10247-10266 None:intergenic 25.0%
! TTAGATTTCTTGAATCTTGA+CGG - tig0032298:10496-10515 None:intergenic 25.0%
! TATACAATACTTAATCCGTT+AGG + tig0032298:10723-10742 Msa1448680:three_prime_UTR 25.0%
! AGACTAAAAGTAATGAAGTT+TGG - tig0032298:10801-10820 None:intergenic 25.0%
!!! ATTACTTTTAGTCTTGCTTT+TGG + tig0032298:10807-10826 Msa1448680:three_prime_UTR 25.0%
AGAGAAAGAATCAGAAGTTA+AGG + tig0032298:4725-4744 Msa1448680:five_prime_UTR 30.0%
ATTGAAGTACAGTAGTAACT+TGG - tig0032298:4766-4785 None:intergenic 30.0%
TCAAAAAGAACAAGAGTTGT+GGG - tig0032298:4866-4885 None:intergenic 30.0%
ATCAAAAAGAACAAGAGTTG+TGG - tig0032298:4867-4886 None:intergenic 30.0%
! AAGAGAGTATGTTTAAGGAA+AGG - tig0032298:4901-4920 None:intergenic 30.0%
! AGAAGAAGAGAGTATGTTTA+AGG - tig0032298:4906-4925 None:intergenic 30.0%
!! CTTTTTCATTTTTCACCTTC+TGG + tig0032298:4986-5005 Msa1448680:five_prime_UTR 30.0%
AAAAGAAAACAAAACCCAGA+AGG - tig0032298:5004-5023 None:intergenic 30.0%
!! TTTTGTTGTGAAACTGGTTT+TGG + tig0032298:5147-5166 Msa1448680:five_prime_UTR 30.0%
GAAAGAAGAAAGAGAATAAC+AGG + tig0032298:5252-5271 Msa1448680:five_prime_UTR 30.0%
! GGATGTGAAAATTCATCTTT+TGG + tig0032298:5786-5805 Msa1448680:intron 30.0%
! CTTTTCTAATTCCTTAGCTA+TGG - tig0032298:5838-5857 None:intergenic 30.0%
!! AATAAGCACCTTTAAGATCT+TGG + tig0032298:5878-5897 Msa1448680:intron 30.0%
CAAAGGACAAATTGATTATG+GGG - tig0032298:5919-5938 None:intergenic 30.0%
CACAAAGGACAAATTGATTA+TGG - tig0032298:5921-5940 None:intergenic 30.0%
AAACCTCATAATTGTCACAA+AGG - tig0032298:5936-5955 None:intergenic 30.0%
TATAATACATGACATTGGGA+TGG + tig0032298:5957-5976 Msa1448680:intron 30.0%
! TGTGTTACACTCTTTTACTA+AGG + tig0032298:6178-6197 Msa1448680:intron 30.0%
! GTGTTACACTCTTTTACTAA+GGG + tig0032298:6179-6198 Msa1448680:intron 30.0%
! TGTTACACTCTTTTACTAAG+GGG + tig0032298:6180-6199 Msa1448680:intron 30.0%
!!! ACTGGTTTTGCAATTTAGAT+AGG + tig0032298:6801-6820 Msa1448680:intron 30.0%
ACTTGAGAAACTGATAGATT+TGG - tig0032298:7060-7079 None:intergenic 30.0%
ATGAACATGTTTCTTGTTGA+GGG + tig0032298:7248-7267 Msa1448680:intron 30.0%
TTTGTTCTATTCCTTTACCT+TGG + tig0032298:7471-7490 Msa1448680:intron 30.0%
!!! CACGAGAATTGTTGATTTTT+TGG + tig0032298:7602-7621 Msa1448680:intron 30.0%
! TCACTATTTTCTATAACCCA+CGG + tig0032298:7829-7848 Msa1448680:CDS 30.0%
TAGTTATTATTGCATACCGT+GGG - tig0032298:7848-7867 None:intergenic 30.0%
! ATTTTTCTTGCACAGATACA+TGG + tig0032298:8205-8224 Msa1448680:intron 30.0%
! TTTTTCTTGCACAGATACAT+GGG + tig0032298:8206-8225 Msa1448680:intron 30.0%
! GTCAATGTAAAGGTATAACT+TGG - tig0032298:8337-8356 None:intergenic 30.0%
TTATACTTCAAAAAGGCAAG+GGG - tig0032298:8363-8382 None:intergenic 30.0%
!! TAAAATGCAGCTTTTTGACT+TGG + tig0032298:8439-8458 Msa1448680:intron 30.0%
TCTCTTAATTATCAAGGGAT+TGG + tig0032298:8837-8856 Msa1448680:CDS 30.0%
CTCTTAATTATCAAGGGATT+GGG + tig0032298:8838-8857 Msa1448680:CDS 30.0%
TCTTAATTATCAAGGGATTG+GGG + tig0032298:8839-8858 Msa1448680:CDS 30.0%
GGCCTTTCAAAATAATAATC+AGG + tig0032298:9085-9104 Msa1448680:CDS 30.0%
GATAATAATCAGCAGATTTC+TGG + tig0032298:9242-9261 Msa1448680:CDS 30.0%
CCGAATAAAAGATTACTTTG+CGG - tig0032298:9683-9702 None:intergenic 30.0%
! CCGCAAAGTAATCTTTTATT+CGG + tig0032298:9680-9699 Msa1448680:CDS 30.0%
TTATGCATTAGAAGAGATGA+GGG - tig0032298:9719-9738 None:intergenic 30.0%
ATTATGCATTAGAAGAGATG+AGG - tig0032298:9720-9739 None:intergenic 30.0%
TCATCTCTTCTAATGCATAA+TGG + tig0032298:9719-9738 Msa1448680:CDS 30.0%
CATCTCTTCTAATGCATAAT+GGG + tig0032298:9720-9739 Msa1448680:CDS 30.0%
! GTAATTAGAAGATTGATGGT+AGG - tig0032298:9798-9817 None:intergenic 30.0%
GAGATGATAATAATTCCATG+AGG - tig0032298:9959-9978 None:intergenic 30.0%
TTGTTGCAGGTTTATAAATC+AGG + tig0032298:10035-10054 Msa1448680:intron 30.0%
TGTTGCAGGTTTATAAATCA+GGG + tig0032298:10036-10055 Msa1448680:intron 30.0%
AGTAGAATATGGGATACTTA+CGG - tig0032298:10236-10255 None:intergenic 30.0%
! GTTTACATGTTTTTCATGCT+AGG + tig0032298:10640-10659 Msa1448680:three_prime_UTR 30.0%
!! TTCACACATTGATTTCCTAA+CGG - tig0032298:10741-10760 None:intergenic 30.0%
TCACGATTGAATTGATTGTT+TGG + tig0032298:10896-10915 Msa1448680:three_prime_UTR 30.0%
TGTAGTTGAAGAATGGAACA+TGG + tig0032298:5073-5092 Msa1448680:five_prime_UTR 35.0%
GTAGTTGAAGAATGGAACAT+GGG + tig0032298:5074-5093 Msa1448680:five_prime_UTR 35.0%
TAGTTGAAGAATGGAACATG+GGG + tig0032298:5075-5094 Msa1448680:five_prime_UTR 35.0%
AAGGAGAAGAAGAATCAATG+AGG + tig0032298:5109-5128 Msa1448680:five_prime_UTR 35.0%
!!! CAGTTTTTTGGTTGGTGAAA+GGG + tig0032298:5193-5212 Msa1448680:five_prime_UTR 35.0%
!!! AGTTTTTTGGTTGGTGAAAG+GGG + tig0032298:5194-5213 Msa1448680:five_prime_UTR 35.0%
AGAATAACAGGGTTGTTCTT+TGG + tig0032298:5264-5283 Msa1448680:five_prime_UTR 35.0%
!!! AGAGAGAGTGTTTTTGATTG+TGG + tig0032298:5333-5352 Msa1448680:five_prime_UTR 35.0%
!!! GAGAGAGTGTTTTTGATTGT+GGG + tig0032298:5334-5353 Msa1448680:five_prime_UTR 35.0%
AACAAACACATACCTTCTTG+GGG - tig0032298:5436-5455 None:intergenic 35.0%
GAACAAACACATACCTTCTT+GGG - tig0032298:5437-5456 None:intergenic 35.0%
TGAACAAACACATACCTTCT+TGG - tig0032298:5438-5457 None:intergenic 35.0%
GAAAGAACAAGTTCAAATCC+TGG - tig0032298:5619-5638 None:intergenic 35.0%
!!! TCTTGTTTTTGCCATAGCTA+AGG + tig0032298:5824-5843 Msa1448680:intron 35.0%
TGTCCTTTGTGACAATTATG+AGG + tig0032298:5930-5949 Msa1448680:intron 35.0%
!! GAGTTCTAGATTCAGAACTT+TGG + tig0032298:5998-6017 Msa1448680:CDS 35.0%
!! GTCCACCATGATTTTTCAAA+GGG - tig0032298:6155-6174 None:intergenic 35.0%
!! TGTCCACCATGATTTTTCAA+AGG - tig0032298:6156-6175 None:intergenic 35.0%
! TACTAGGAATCTCTTGTTTC+TGG + tig0032298:6224-6243 Msa1448680:intron 35.0%
GTGACACATATATCCTAACT+CGG + tig0032298:6474-6493 Msa1448680:intron 35.0%
TGAAGTTGACAAATAAGCTG+AGG - tig0032298:6575-6594 None:intergenic 35.0%
! TTTTCCCTGATTTTTGTGTC+TGG + tig0032298:6657-6676 Msa1448680:intron 35.0%
GCAATTGGGTAATGAAAACA+TGG - tig0032298:6685-6704 None:intergenic 35.0%
CTGGATCAAAACAAGCAATT+GGG - tig0032298:6699-6718 None:intergenic 35.0%
GCAAAACCAGTTATCACTTA+AGG - tig0032298:6792-6811 None:intergenic 35.0%
! GTCTTGCAAAAGTAGTTTGT+CGG - tig0032298:6922-6941 None:intergenic 35.0%
!! TGAAAAAGTGTTTCCTCCTT+TGG + tig0032298:6999-7018 Msa1448680:CDS 35.0%
CGACAAATATTTACCAAAGG+AGG - tig0032298:7015-7034 None:intergenic 35.0%
TGCTCAAGAGTTAATAGCAA+GGG + tig0032298:7121-7140 Msa1448680:CDS 35.0%
TTAATAGCAAGGGATTTGCA+TGG + tig0032298:7131-7150 Msa1448680:CDS 35.0%
AAATTCAGACATATCTTCCG+AGG + tig0032298:7164-7183 Msa1448680:intron 35.0%
GATGAACATGTTTCTTGTTG+AGG + tig0032298:7247-7266 Msa1448680:intron 35.0%
! GTTGTAAGTAGATGCCTTTT+GGG - tig0032298:7324-7343 None:intergenic 35.0%
! AGTTGTAAGTAGATGCCTTT+TGG - tig0032298:7325-7344 None:intergenic 35.0%
!! AAAAGGCATCTACTTACAAC+TGG + tig0032298:7324-7343 Msa1448680:CDS 35.0%
AACAAATTAATGAGGTCGAG+AGG - tig0032298:7457-7476 None:intergenic 35.0%
TCAAGTGCATCTTCTTCAAT+AGG + tig0032298:7664-7683 Msa1448680:intron 35.0%
GAAAAGAACCAATTGCTTCT+TGG + tig0032298:7690-7709 Msa1448680:CDS 35.0%
TCAAGTGATAGTATGCACTT+GGG + tig0032298:7762-7781 Msa1448680:CDS 35.0%
GAAAATAGTGAAACGGCTAT+TGG - tig0032298:7820-7839 None:intergenic 35.0%
CTAGTTATTATTGCATACCG+TGG - tig0032298:7849-7868 None:intergenic 35.0%
TATCATACTCGAGTTTCAGT+TGG + tig0032298:7990-8009 Msa1448680:CDS 35.0%
AGATACATGGGTACAATAAC+TGG + tig0032298:8218-8237 Msa1448680:intron 35.0%
TCTTTACTTTAACTGCTTGC+AGG + tig0032298:8744-8763 Msa1448680:intron 35.0%
! GGCATGAAAGATGATGATTT+TGG + tig0032298:8765-8784 Msa1448680:intron 35.0%
!! ATCGGTTTGCATATTAAGCA+TGG - tig0032298:8898-8917 None:intergenic 35.0%
!!! TTATTTTGAAAGGCCTGTTG+AGG - tig0032298:9080-9099 None:intergenic 35.0%
!! TAATCAGCAGATTTCTGGTT+CGG + tig0032298:9247-9266 Msa1448680:CDS 35.0%
AATCAGAAAAACTCTCCTGA+TGG - tig0032298:9349-9368 None:intergenic 35.0%
TTGTTCTTGGAAGACTCATA+AGG - tig0032298:9454-9473 None:intergenic 35.0%
GTTCCTGTTCAAAATTCAAC+TGG + tig0032298:9482-9501 Msa1448680:CDS 35.0%
! CAACCAGTTGAATTTTGAAC+AGG - tig0032298:9488-9507 None:intergenic 35.0%
CTGTTCAAAATTCAACTGGT+TGG + tig0032298:9486-9505 Msa1448680:CDS 35.0%
TAATGGGATGTCGAACTTTA+AGG + tig0032298:9736-9755 Msa1448680:CDS 35.0%
AATGGGATGTCGAACTTTAA+GGG + tig0032298:9737-9756 Msa1448680:CDS 35.0%
TCTAATTACATGAACACCAC+AGG + tig0032298:9809-9828 Msa1448680:CDS 35.0%
AGGAAAATTCACCTTCACAA+AGG - tig0032298:9939-9958 None:intergenic 35.0%
TTTGGTATGTTTCTTGTTGC+AGG + tig0032298:10022-10041 Msa1448680:intron 35.0%
GTTTATAAATCAGGGTCCTT+CGG + tig0032298:10044-10063 Msa1448680:CDS 35.0%
ATGCAATCTCTCTTATGACA+GGG + tig0032298:10334-10353 Msa1448680:intron 35.0%
CTATTTGAGAGCCTTTGAAT+TGG - tig0032298:10452-10471 None:intergenic 35.0%
GATTCAAGAAATCTAAGCAG+CGG + tig0032298:10500-10519 Msa1448680:CDS 35.0%
ATTCAAGAAATCTAAGCAGC+GGG + tig0032298:10501-10520 Msa1448680:CDS 35.0%
!!! TGCTTTTGGCTCAAAATCTT+TGG + tig0032298:10821-10840 Msa1448680:three_prime_UTR 35.0%
!!! GCTTTTGGCTCAAAATCTTT+GGG + tig0032298:10822-10841 Msa1448680:three_prime_UTR 35.0%
GGGATGCATGAATTTACTAA+TGG + tig0032298:10842-10861 Msa1448680:three_prime_UTR 35.0%
ATTCAATCGTGACACATCAA+AGG - tig0032298:10888-10907 None:intergenic 35.0%
GAGAGAGAGAAAAAAGACAG+AGG + tig0032298:4700-4719 Msa1448680:five_prime_UTR 40.0%
TGAAGCGTGTAGTTGAAGAA+TGG + tig0032298:5066-5085 Msa1448680:five_prime_UTR 40.0%
CCTTTCACCAACCAAAAAAC+TGG - tig0032298:5195-5214 None:intergenic 40.0%
!!! CCAGTTTTTTGGTTGGTGAA+AGG + tig0032298:5192-5211 Msa1448680:five_prime_UTR 40.0%
!!! GTTTTTTGGTTGGTGAAAGG+GGG + tig0032298:5195-5214 Msa1448680:five_prime_UTR 40.0%
ATAACAGGGTTGTTCTTTGG+TGG + tig0032298:5267-5286 Msa1448680:five_prime_UTR 40.0%
TAACAGGGTTGTTCTTTGGT+GGG + tig0032298:5268-5287 Msa1448680:five_prime_UTR 40.0%
!! ACATTGGGATGGATTTTGCA+GGG + tig0032298:5968-5987 Msa1448680:intron 40.0%
AGAGTTGTGTACTTTCCACA+AGG + tig0032298:6066-6085 Msa1448680:CDS 40.0%
! GTGCTCCCTTTGAAAAATCA+TGG + tig0032298:6147-6166 Msa1448680:intron 40.0%
! CTCCCTTTGAAAAATCATGG+TGG + tig0032298:6150-6169 Msa1448680:intron 40.0%
TGCCTCTTCAACCACAATTT+GGG - tig0032298:6370-6389 None:intergenic 40.0%
ATGCCTCTTCAACCACAATT+TGG - tig0032298:6371-6390 None:intergenic 40.0%
GAGGTAAGCTTGGATAGTTT+GGG - tig0032298:6553-6572 None:intergenic 40.0%
AGTTGACAAATAAGCTGAGG+AGG - tig0032298:6572-6591 None:intergenic 40.0%
CCTGGATCAAAACAAGCAAT+TGG - tig0032298:6700-6719 None:intergenic 40.0%
!!! CCAATTGCTTGTTTTGATCC+AGG + tig0032298:6697-6716 Msa1448680:intron 40.0%
ACACTGCCTTAAGTGATAAC+TGG + tig0032298:6783-6802 Msa1448680:intron 40.0%
TTTGCAGCAAGAGCAAAAAG+AGG + tig0032298:6858-6877 Msa1448680:intron 40.0%
! TAGTTTGTCGGCTGTTTACT+TGG - tig0032298:6910-6929 None:intergenic 40.0%
!! CTTGCTATTAACTCTTGAGC+AGG - tig0032298:7122-7141 None:intergenic 40.0%
CTGCTCAAGAGTTAATAGCA+AGG + tig0032298:7120-7139 Msa1448680:CDS 40.0%
!! AGTGCTAAAAGACTTGTTGC+TGG + tig0032298:7363-7382 Msa1448680:CDS 40.0%
!! GTGATTCTGTGCTGTTTATC+TGG + tig0032298:7385-7404 Msa1448680:intron 40.0%
TTGTGTCCTGCTTATCAAAG+TGG + tig0032298:7420-7439 Msa1448680:intron 40.0%
TTCTTACTGACAAGTGCTTC+AGG + tig0032298:7521-7540 Msa1448680:intron 40.0%
ACTATCACTTGACAGTACTG+AGG - tig0032298:7754-7773 None:intergenic 40.0%
GTCAAGTGATAGTATGCACT+TGG + tig0032298:7761-7780 Msa1448680:CDS 40.0%
! AAGGGTATGACAAATTCGGA+TGG - tig0032298:7948-7967 None:intergenic 40.0%
ATCCGAATTTGTCATACCCT+TGG + tig0032298:7947-7966 Msa1448680:CDS 40.0%
GCTTTAACATACTTCGCCAA+GGG - tig0032298:7966-7985 None:intergenic 40.0%
! AGCTTTAACATACTTCGCCA+AGG - tig0032298:7967-7986 None:intergenic 40.0%
! TTTCAGTTGGTATGCGTTTC+AGG + tig0032298:8003-8022 Msa1448680:CDS 40.0%
AATAACTGGCATTTGTGACC+TGG + tig0032298:8232-8251 Msa1448680:CDS 40.0%
CAAGGGGAAAGTCAATGTAA+AGG - tig0032298:8347-8366 None:intergenic 40.0%
ATTTCCCACAAAGACACTCT+AGG - tig0032298:8508-8527 None:intergenic 40.0%
AGATGACATGAAGCTAACCA+TGG - tig0032298:8615-8634 None:intergenic 40.0%
GCATGAATTCTCCTTTGTTG+TGG + tig0032298:8787-8806 Msa1448680:CDS 40.0%
AAGGGATTGGGGTTAATTCT+TGG + tig0032298:8850-8869 Msa1448680:CDS 40.0%
TTAATTCTTGGATGCAGCCA+AGG + tig0032298:8862-8881 Msa1448680:CDS 40.0%
GTTTGCATATTAAGCATGGC+GGG - tig0032298:8894-8913 None:intergenic 40.0%
GGTTTGCATATTAAGCATGG+CGG - tig0032298:8895-8914 None:intergenic 40.0%
AACCGATATGTATCAAGCTG+TGG + tig0032298:8911-8930 Msa1448680:CDS 40.0%
AGCCACAGCTTGATACATAT+CGG - tig0032298:8916-8935 None:intergenic 40.0%
TGGTTGCTGAAATTGAAGCA+AGG - tig0032298:8997-9016 None:intergenic 40.0%
ACAACAAACTCAACAGCAAG+TGG + tig0032298:9217-9236 Msa1448680:CDS 40.0%
AATGAAGAGAGAGCTTGCAT+GGG - tig0032298:9323-9342 None:intergenic 40.0%
TAATGAAGAGAGAGCTTGCA+TGG - tig0032298:9324-9343 None:intergenic 40.0%
TCTCTCTTCATTATGCCATC+AGG + tig0032298:9331-9350 Msa1448680:CDS 40.0%
TTCTCCTTTGCACAGTATCA+TGG + tig0032298:9397-9416 Msa1448680:CDS 40.0%
TCTCCTTTGCACAGTATCAT+GGG + tig0032298:9398-9417 Msa1448680:CDS 40.0%
TCTTGGAAGACTCATAAGGT+GGG - tig0032298:9450-9469 None:intergenic 40.0%
TTCTTGGAAGACTCATAAGG+TGG - tig0032298:9451-9470 None:intergenic 40.0%
TCTTCCAAGAACAAGCTCTT+GGG + tig0032298:9460-9479 Msa1448680:CDS 40.0%
ATCTCAATGTATTCTGCCTC+AGG + tig0032298:9553-9572 Msa1448680:CDS 40.0%
ATGGGATGTCGAACTTTAAG+GGG + tig0032298:9738-9757 Msa1448680:CDS 40.0%
! AGAAGATTGATGGTAGGACA+TGG - tig0032298:9792-9811 None:intergenic 40.0%
! GCTGATTCTTCGTTGAATCA+TGG + tig0032298:9833-9852 Msa1448680:CDS 40.0%
TTCTTGCATACCCAGGAAAA+CGG + tig0032298:9884-9903 Msa1448680:CDS 40.0%
!! TCACAAAGGTCTTGTTCAGT+GGG - tig0032298:9925-9944 None:intergenic 40.0%
!! TTCACAAAGGTCTTGTTCAG+TGG - tig0032298:9926-9945 None:intergenic 40.0%
ACTGAACAAGACCTTTGTGA+AGG + tig0032298:9925-9944 Msa1448680:CDS 40.0%
! GTGAAGGTGAATTTTCCTCA+TGG + tig0032298:9941-9960 Msa1448680:intron 40.0%
GGAGAAGAACATCATTCTCT+CGG - tig0032298:10196-10215 None:intergenic 40.0%
GAGAATGATGTTCTTCTCCT+CGG + tig0032298:10197-10216 Msa1448680:CDS 40.0%
GACGTAAGTGTACAGAAAAG+AGG - tig0032298:10308-10327 None:intergenic 40.0%
CATGCAATCTCTCTTATGAC+AGG + tig0032298:10333-10352 Msa1448680:intron 40.0%
GGGAATTCGTGAATAGTGTA+TGG + tig0032298:10354-10373 Msa1448680:intron 40.0%
TGAACTCGGTTCCAATTCAA+AGG + tig0032298:10438-10457 Msa1448680:CDS 40.0%
TTAGTAGTCTAGAGATCCCA+CGG - tig0032298:10534-10553 None:intergenic 40.0%
AAGAATGGAACATGGGGTGT+TGG + tig0032298:5081-5100 Msa1448680:five_prime_UTR 45.0%
! AGAATGGAACATGGGGTGTT+GGG + tig0032298:5082-5101 Msa1448680:five_prime_UTR 45.0%
AAACACATACCTTCTTGGGG+TGG - tig0032298:5433-5452 None:intergenic 45.0%
GGGTGTGATAATCTCGAGTT+CGG + tig0032298:5555-5574 Msa1448680:intron 45.0%
GAACAAGTTCAAATCCTGGC+TGG - tig0032298:5615-5634 None:intergenic 45.0%
!! GACATTGGGATGGATTTTGC+AGG + tig0032298:5967-5986 Msa1448680:intron 45.0%
!! CATTGGGATGGATTTTGCAG+GGG + tig0032298:5969-5988 Msa1448680:intron 45.0%
ACAACTCTACTTCCAACTGC+TGG - tig0032298:6054-6073 None:intergenic 45.0%
ACTTGTTCACTGTGACCTTG+TGG - tig0032298:6084-6103 None:intergenic 45.0%
CGGAGAATTGCGTTCAAATG+CGG + tig0032298:6335-6354 Msa1448680:intron 45.0%
GGCTGATATGACCCAAATTG+TGG + tig0032298:6356-6375 Msa1448680:intron 45.0%
GACCCAAATTGTGGTTGAAG+AGG + tig0032298:6365-6384 Msa1448680:intron 45.0%
TGTTGTTGCAGCCCAAATTG+CGG + tig0032298:6399-6418 Msa1448680:intron 45.0%
!! ATGTGCATCGACTTCCTTGT+TGG - tig0032298:6528-6547 None:intergenic 45.0%
GGAGGTAAGCTTGGATAGTT+TGG - tig0032298:6554-6573 None:intergenic 45.0%
ATAAGCTGAGGAGGTAAGCT+TGG - tig0032298:6563-6582 None:intergenic 45.0%
GGTGCCAGACACAAAAATCA+GGG - tig0032298:6664-6683 None:intergenic 45.0%
! TGGTGCCAGACACAAAAATC+AGG - tig0032298:6665-6684 None:intergenic 45.0%
TACAGCATTCAGAGGTTGCA+AGG - tig0032298:6759-6778 None:intergenic 45.0%
GTGTGTCATACAGCATTCAG+AGG - tig0032298:6767-6786 None:intergenic 45.0%
TCTTCGTAATTGTGACCTGC+AGG + tig0032298:7079-7098 Msa1448680:intron 45.0%
GCTATTAACTCTTGAGCAGG+AGG - tig0032298:7119-7138 None:intergenic 45.0%
! GGGATTTGCATGGTAACGAA+TGG + tig0032298:7141-7160 Msa1448680:intron 45.0%
! TTCAGCTTTGTAACTCGCCT+CGG - tig0032298:7184-7203 None:intergenic 45.0%
! TAAGTAGATGCCTTTTGGGC+TGG - tig0032298:7320-7339 None:intergenic 45.0%
GGCATCTACTTACAACTGGA+TGG + tig0032298:7328-7347 Msa1448680:CDS 45.0%
AAGCGTCCACTTTGATAAGC+AGG - tig0032298:7429-7448 None:intergenic 45.0%
GCATGACAGATCCAAGGTAA+AGG - tig0032298:7485-7504 None:intergenic 45.0%
! TTGAAGGCATGACAGATCCA+AGG - tig0032298:7491-7510 None:intergenic 45.0%
! TCACTTGACAGTACTGAGGA+AGG - tig0032298:7750-7769 None:intergenic 45.0%
! CGCCAAGGGTATGACAAATT+CGG - tig0032298:7952-7971 None:intergenic 45.0%
!! CAGGATGCTCTTTGAAACAG+AGG + tig0032298:8022-8041 Msa1448680:CDS 45.0%
TTTGTGACCTGGATTCTGTC+CGG + tig0032298:8243-8262 Msa1448680:CDS 45.0%
!!! AGCTTTTTGACTTGGATCGC+AGG + tig0032298:8447-8466 Msa1448680:intron 45.0%
!!! TTTTGACTTGGATCGCAGGT+TGG + tig0032298:8451-8470 Msa1448680:intron 45.0%
! GCAACCTAGAGTGTCTTTGT+GGG + tig0032298:8501-8520 Msa1448680:CDS 45.0%
TGAAGCTAACCATGGAACGA+AGG - tig0032298:8607-8626 None:intergenic 45.0%
AGATCCTTCCAAACAGCTTC+TGG + tig0032298:8968-8987 Msa1448680:CDS 45.0%
GATCCTTCCAAACAGCTTCT+GGG + tig0032298:8969-8988 Msa1448680:CDS 45.0%
ATTAAAGCAGCGGTCCTGTT+CGG - tig0032298:9029-9048 None:intergenic 45.0%
!! TGAGGATTAGTCTGAGCTTG+TGG - tig0032298:9137-9156 None:intergenic 45.0%
TGATGCTGTAGATGCTGTTG+AGG - tig0032298:9155-9174 None:intergenic 45.0%
! GTTGCTGCTGGTTATGATGA+CGG - tig0032298:9199-9218 None:intergenic 45.0%
!! GTTGAGTTTGTTGTTGCTGC+TGG - tig0032298:9211-9230 None:intergenic 45.0%
ACAAACTCAACAGCAAGTGG+TGG + tig0032298:9220-9239 Msa1448680:CDS 45.0%
GAACCCATGATACTGTGCAA+AGG - tig0032298:9404-9423 None:intergenic 45.0%
AGGTGGGATGATTCATCATG+CGG - tig0032298:9434-9453 None:intergenic 45.0%
GTCTTCCAAGAACAAGCTCT+TGG + tig0032298:9459-9478 Msa1448680:CDS 45.0%
TCAATGTATTCTGCCTCAGG+TGG + tig0032298:9556-9575 Msa1448680:CDS 45.0%
ATTACATTGCCACCGTTTCC+TGG + tig0032298:9620-9639 Msa1448680:CDS 45.0%
AGTGCCCAATAGACCAAGAA+GGG + tig0032298:9648-9667 Msa1448680:CDS 45.0%
TGCTCCCTTCTTGGTCTATT+GGG - tig0032298:9655-9674 None:intergenic 45.0%
TTGCTCCCTTCTTGGTCTAT+TGG - tig0032298:9656-9675 None:intergenic 45.0%
! TCGAACTTTAAGGGGATCAG+TGG + tig0032298:9746-9765 Msa1448680:CDS 45.0%
! TTGATGGTAGGACATGGTTG+AGG - tig0032298:9786-9805 None:intergenic 45.0%
TTGAATCATGGAGTAACGCC+TGG + tig0032298:9845-9864 Msa1448680:CDS 45.0%
AAACCAGGTTCACCAATACC+AGG - tig0032298:9866-9885 None:intergenic 45.0%
TCTTGCATACCCAGGAAAAC+GGG + tig0032298:9885-9904 Msa1448680:CDS 45.0%
GATATCCAACGATCTTCCGA+AGG - tig0032298:10063-10082 None:intergenic 45.0%
TATGGGATACTTACGGCCAA+GGG - tig0032298:10229-10248 None:intergenic 45.0%
ATATGGGATACTTACGGCCA+AGG - tig0032298:10230-10249 None:intergenic 45.0%
!! GAATGGAACATGGGGTGTTG+GGG + tig0032298:5083-5102 Msa1448680:five_prime_UTR 50.0%
!! AATGGAACATGGGGTGTTGG+GGG + tig0032298:5084-5103 Msa1448680:five_prime_UTR 50.0%
CCAGCTGAAGAGAGTCTCAT+TGG - tig0032298:5400-5419 None:intergenic 50.0%
CCAATGAGACTCTCTTCAGC+TGG + tig0032298:5397-5416 Msa1448680:exon 50.0%
TTTAGTCCTCCACCCCAAGA+AGG + tig0032298:5421-5440 Msa1448680:CDS 50.0%
TAATCTCGAGTTCGGTCCAG+AGG + tig0032298:5563-5582 Msa1448680:intron 50.0%
GAACTTTGGCATGCATGTGC+TGG + tig0032298:6012-6031 Msa1448680:CDS 50.0%
CTGCTGGCAAAGAGACAAGA+GGG - tig0032298:6038-6057 None:intergenic 50.0%
ACTGCTGGCAAAGAGACAAG+AGG - tig0032298:6039-6058 None:intergenic 50.0%
CTTGTCTCTTTGCCAGCAGT+TGG + tig0032298:6039-6058 Msa1448680:CDS 50.0%
ATGGTCTACGGCCGCAATTT+GGG - tig0032298:6413-6432 None:intergenic 50.0%
AATGGTCTACGGCCGCAATT+TGG - tig0032298:6414-6433 None:intergenic 50.0%
!!! TGTTTTGATCCAGGCTGACG+TGG + tig0032298:6706-6725 Msa1448680:intron 50.0%
CATCTGCGCATACACCTCAT+CGG - tig0032298:6735-6754 None:intergenic 50.0%
! GCTTGTGTCACTAGCAGTCA+AGG - tig0032298:6944-6963 None:intergenic 50.0%
GCTAGTGACACAAGCACTCA+CGG + tig0032298:6949-6968 Msa1448680:CDS 50.0%
CTAGTGACACAAGCACTCAC+GGG + tig0032298:6950-6969 Msa1448680:CDS 50.0%
TAGTGACACAAGCACTCACG+GGG + tig0032298:6951-6970 Msa1448680:CDS 50.0%
!!! GAAACACTTTTTCAGCCGCC+CGG - tig0032298:6993-7012 None:intergenic 50.0%
!! GCTTCAGGCTTTGAGAAGTG+CGG + tig0032298:7536-7555 Msa1448680:intron 50.0%
GGCGGATACCAAGAAGCAAT+TGG - tig0032298:7701-7720 None:intergenic 50.0%
CAGTTTGTGGTCTGCTAGCA+CGG - tig0032298:7722-7741 None:intergenic 50.0%
!! GAGGAAGGCATCACAGTTTG+TGG - tig0032298:7735-7754 None:intergenic 50.0%
!! ACTTGGATCGCAGGTTGGTT+GGG + tig0032298:8456-8475 Msa1448680:intron 50.0%
ATGAATCCACTGCCGGAGAA+AGG + tig0032298:8479-8498 Msa1448680:CDS 50.0%
CACTCTAGGTTGCCTTTCTC+CGG - tig0032298:8494-8513 None:intergenic 50.0%
! GGCAACCTAGAGTGTCTTTG+TGG + tig0032298:8500-8519 Msa1448680:CDS 50.0%
!! GGGAATGGTGACGGATACAT+AGG - tig0032298:8550-8569 None:intergenic 50.0%
CGTTTAAGCCTGAGAGGGAA+TGG - tig0032298:8565-8584 None:intergenic 50.0%
ACGGTCGTTTAAGCCTGAGA+GGG - tig0032298:8570-8589 None:intergenic 50.0%
! TTTGTTGTGGCTCCGAGACA+CGG + tig0032298:8800-8819 Msa1448680:CDS 50.0%
CTACTGCACTTCAGGACATG+AGG + tig0032298:8937-8956 Msa1448680:CDS 50.0%
GAACCCAGAAGCTGTTTGGA+AGG - tig0032298:8975-8994 None:intergenic 50.0%
CAAGGAACCCAGAAGCTGTT+TGG - tig0032298:8979-8998 None:intergenic 50.0%
TTAAAGCAGCGGTCCTGTTC+GGG - tig0032298:9028-9047 None:intergenic 50.0%
!! TGCTGGTTATGATGACGGAG+TGG - tig0032298:9194-9213 None:intergenic 50.0%
! GGAACCCAAGAGCTTGTTCT+TGG - tig0032298:9467-9486 None:intergenic 50.0%
ATTGAGATGCTCCCGAAGAG+AGG - tig0032298:9541-9560 None:intergenic 50.0%
ATTGCCACCGTTTCCTGGTA+GGG + tig0032298:9625-9644 Msa1448680:CDS 50.0%
GAGTGCCCAATAGACCAAGA+AGG + tig0032298:9647-9666 Msa1448680:CDS 50.0%
CAACGAAGAATCAGCACCTG+TGG - tig0032298:9828-9847 None:intergenic 50.0%
CATGGAGTAACGCCTGGTAT+TGG + tig0032298:9851-9870 Msa1448680:CDS 50.0%
ACCTGGTTTCTTGCATACCC+AGG + tig0032298:9877-9896 Msa1448680:CDS 50.0%
TCCTGGGTATGCAAGAAACC+AGG - tig0032298:9881-9900 None:intergenic 50.0%
CTTGCATACCCAGGAAAACG+GGG + tig0032298:9886-9905 Msa1448680:CDS 50.0%
! TCCTTGATCCCCGTTTTCCT+GGG - tig0032298:9897-9916 None:intergenic 50.0%
! TTCCTTGATCCCCGTTTTCC+TGG - tig0032298:9898-9917 None:intergenic 50.0%
GATGTTCTTCTCCTCGGTGA+TGG + tig0032298:10203-10222 Msa1448680:CDS 50.0%
CATCAAGATACTTTCGCCCG+AGG + tig0032298:10379-10398 Msa1448680:CDS 50.0%
!! ACATGGGGTGTTGGGGGTTA+AGG + tig0032298:5090-5109 Msa1448680:five_prime_UTR 55.0%
CACATACCTTCTTGGGGTGG+AGG - tig0032298:5430-5449 None:intergenic 55.0%
GTCTCTGGATTGTTCCAGCC+AGG + tig0032298:5598-5617 Msa1448680:intron 55.0%
!! GCGCAGAAAAGCACCGAGTT+AGG - tig0032298:6490-6509 None:intergenic 55.0%
!!! AACTCGGTGCTTTTCTGCGC+AGG + tig0032298:6490-6509 Msa1448680:intron 55.0%
GGTGGCTGTGTCAACCAACA+AGG + tig0032298:6511-6530 Msa1448680:intron 55.0%
GCTTACCTTCCAGCAGAGCT+GGG + tig0032298:6880-6899 Msa1448680:CDS 55.0%
AGTGACACAAGCACTCACGG+GGG + tig0032298:6952-6971 Msa1448680:CDS 55.0%
GCTGTTGGGAGAAATCCTGC+AGG - tig0032298:7097-7116 None:intergenic 55.0%
CTCTTGAGCAGGAGGCTGTT+GGG - tig0032298:7111-7130 None:intergenic 55.0%
ACTCTTGAGCAGGAGGCTGT+TGG - tig0032298:7112-7131 None:intergenic 55.0%
TTTGTGGTCTGCTAGCACGG+CGG - tig0032298:7719-7738 None:intergenic 55.0%
TCTTGCTGCAGCAGCTCATG+CGG + tig0032298:7788-7807 Msa1448680:CDS 55.0%
CAGAGGAGTCTAGTGTGCGA+CGG + tig0032298:8039-8058 Msa1448680:CDS 55.0%
TCCGGTGGCAGAACTCACAT+TGG + tig0032298:8261-8280 Msa1448680:CDS 55.0%
GCCAATGTGAGTTCTGCCAC+CGG - tig0032298:8265-8284 None:intergenic 55.0%
GCAGAACTCACATTGGCGCT+CGG + tig0032298:8268-8287 Msa1448680:CDS 55.0%
CTCACATTGGCGCTCGGTAA+AGG + tig0032298:8274-8293 Msa1448680:CDS 55.0%
!! GACTTGGATCGCAGGTTGGT+TGG + tig0032298:8455-8474 Msa1448680:intron 55.0%
GGTTGGGATGAATCCACTGC+CGG + tig0032298:8472-8491 Msa1448680:CDS 55.0%
ATCCGTCACCATTCCCTCTC+AGG + tig0032298:8554-8573 Msa1448680:CDS 55.0%
AGCCTGAGAGGGAATGGTGA+CGG - tig0032298:8559-8578 None:intergenic 55.0%
CACGGTCGTTTAAGCCTGAG+AGG - tig0032298:8571-8590 None:intergenic 55.0%
CTCTCAGGCTTAAACGACCG+TGG + tig0032298:8569-8588 Msa1448680:CDS 55.0%
TGGAACGAAGGCAATCCAGG+AGG - tig0032298:8595-8614 None:intergenic 55.0%
CCATGGAACGAAGGCAATCC+AGG - tig0032298:8598-8617 None:intergenic 55.0%
CCTGGATTGCCTTCGTTCCA+TGG + tig0032298:8595-8614 Msa1448680:CDS 55.0%
GTGTCTCGGAGCCACAACAA+AGG - tig0032298:8801-8820 None:intergenic 55.0%
GAAGCCCTCTATCCGTGTCT+CGG - tig0032298:8815-8834 None:intergenic 55.0%
! AGCATGGCGGGATCAAACCT+TGG - tig0032298:8882-8901 None:intergenic 55.0%
TGTGGCTGCTACTGCACTTC+AGG + tig0032298:8929-8948 Msa1448680:CDS 55.0%
AACCACCGAACTTCCCGAAC+AGG + tig0032298:9012-9031 Msa1448680:CDS 55.0%
! CAGGACCGCTGCTTTAATGC+AGG + tig0032298:9031-9050 Msa1448680:CDS 55.0%
CTGCGCCTGCATTAAAGCAG+CGG - tig0032298:9039-9058 None:intergenic 55.0%
! TGCATGGGTGGTGGTGATTG+AGG - tig0032298:9308-9327 None:intergenic 55.0%
GAAGAGAGAGCTTGCATGGG+TGG - tig0032298:9320-9339 None:intergenic 55.0%
GGTGGATCCACTCCTCTCTT+CGG + tig0032298:9526-9545 Msa1448680:CDS 55.0%
GTGGATCCACTCCTCTCTTC+GGG + tig0032298:9527-9546 Msa1448680:CDS 55.0%
TGCCTCAGGTGGAGCAGTTA+GGG + tig0032298:9567-9586 Msa1448680:CDS 55.0%
CATTGCCACCGTTTCCTGGT+AGG + tig0032298:9624-9643 Msa1448680:CDS 55.0%
TCTATTGGGCACTCCCTACC+AGG - tig0032298:9641-9660 None:intergenic 55.0%
GCGGATCATTGCTCCCTTCT+TGG - tig0032298:9664-9683 None:intergenic 55.0%
!! ACGCCTGGTATTGGTGAACC+TGG + tig0032298:9860-9879 Msa1448680:CDS 55.0%
ACCCAGGAAAACGGGGATCA+AGG + tig0032298:9893-9912 Msa1448680:CDS 55.0%
AGGGTCCTTCGGAAGATCGT+TGG + tig0032298:10055-10074 Msa1448680:CDS 55.0%
AGTGAGCTCGCCCGAATGTT+CGG + tig0032298:10113-10132 Msa1448680:CDS 55.0%
GCCTTCCAGTCCGAACATTC+GGG - tig0032298:10126-10145 None:intergenic 55.0%
CGCCTTCCAGTCCGAACATT+CGG - tig0032298:10127-10146 None:intergenic 55.0%
TTGGAGGACCCTGTGAGATC+AGG + tig0032298:10149-10168 Msa1448680:CDS 55.0%
! CCCATTTGCTGCACTTCCTC+GGG - tig0032298:10398-10417 None:intergenic 55.0%
! CCCGAGGAAGTGCAGCAAAT+GGG + tig0032298:10395-10414 Msa1448680:CDS 55.0%
! GCCCATTTGCTGCACTTCCT+CGG - tig0032298:10399-10418 None:intergenic 55.0%
GTGCAGCAAATGGGCAACAC+TGG + tig0032298:10404-10423 Msa1448680:CDS 55.0%
! CAAATGGGCAACACTGGCCT+CGG + tig0032298:10410-10429 Msa1448680:CDS 55.0%
! AAATGGGCAACACTGGCCTC+GGG + tig0032298:10411-10430 Msa1448680:CDS 55.0%
! TGGCCTCGGGCTTTTGAACT+CGG + tig0032298:10424-10443 Msa1448680:CDS 55.0%
GAACCGAGTTCAAAAGCCCG+AGG - tig0032298:10430-10449 None:intergenic 55.0%
AAGCAGCGGGATAACAACCG+TGG + tig0032298:10514-10533 Msa1448680:CDS 55.0%
AGCAGCGGGATAACAACCGT+GGG + tig0032298:10515-10534 Msa1448680:CDS 55.0%
!! TCGGTGCTTTTCTGCGCAGG+TGG + tig0032298:6493-6512 Msa1448680:intron 60.0%
GGCTTACCTTCCAGCAGAGC+TGG + tig0032298:6879-6898 Msa1448680:CDS 60.0%
GAGTTCCCAGCTCTGCTGGA+AGG - tig0032298:6888-6907 None:intergenic 60.0%
CTTGGAGTTCCCAGCTCTGC+TGG - tig0032298:6892-6911 None:intergenic 60.0%
CTCTTGCAGGCCAGCCCAAA+AGG + tig0032298:7307-7326 Msa1448680:intron 60.0%
GGAGTCTAGTGTGCGACGGT+AGG + tig0032298:8043-8062 Msa1448680:intron 60.0%
GTGACCTGGATTCTGTCCGG+TGG + tig0032298:8246-8265 Msa1448680:CDS 60.0%
TCTGCCACCGGACAGAATCC+AGG - tig0032298:8253-8272 None:intergenic 60.0%
AGGTTGCCTTTCTCCGGCAG+TGG - tig0032298:8488-8507 None:intergenic 60.0%
CTTAAACGACCGTGGCCTCC+TGG + tig0032298:8577-8596 Msa1448680:CDS 60.0%
GAAGGCAATCCAGGAGGCCA+CGG - tig0032298:8589-8608 None:intergenic 60.0%
TGGCTCCGAGACACGGATAG+AGG + tig0032298:8807-8826 Msa1448680:CDS 60.0%
GGCTCCGAGACACGGATAGA+GGG + tig0032298:8808-8827 Msa1448680:CDS 60.0%
GTCCTGTTCGGGAAGTTCGG+TGG - tig0032298:9017-9036 None:intergenic 60.0%
GCGGTCCTGTTCGGGAAGTT+CGG - tig0032298:9020-9039 None:intergenic 60.0%
GCAACAGTCGCAGCCTCAAC+AGG + tig0032298:9064-9083 Msa1448680:CDS 60.0%
GAGAGAGCTTGCATGGGTGG+TGG - tig0032298:9317-9336 None:intergenic 60.0%
TTGGCCGTCGAAGCGCATTG+CGG + tig0032298:9505-9524 Msa1448680:CDS 60.0%
TCCACCGCAATGCGCTTCGA+CGG - tig0032298:9512-9531 None:intergenic 60.0%
GATGCTCCCGAAGAGAGGAG+TGG - tig0032298:9536-9555 None:intergenic 60.0%
CTGCCTCAGGTGGAGCAGTT+AGG + tig0032298:9566-9585 Msa1448680:CDS 60.0%
TGCCCTAACTGCTCCACCTG+AGG - tig0032298:9572-9591 None:intergenic 60.0%
TCAGGTGGAGCAGTTAGGGC+AGG + tig0032298:9571-9590 Msa1448680:CDS 60.0%
CACTCCCTACCAGGAAACGG+TGG - tig0032298:9632-9651 None:intergenic 60.0%
GGGCACTCCCTACCAGGAAA+CGG - tig0032298:9635-9654 None:intergenic 60.0%
! GCCCGAATGTTCGGACTGGA+AGG + tig0032298:10122-10141 Msa1448680:CDS 60.0%
! GTTCGGACTGGAAGGCGAGT+TGG + tig0032298:10130-10149 Msa1448680:CDS 60.0%
AGGACCCTGTGAGATCAGGC+TGG + tig0032298:10153-10172 Msa1448680:CDS 60.0%
GCTGCCAGCCTGATCTCACA+GGG - tig0032298:10160-10179 None:intergenic 60.0%
AGCTGCCAGCCTGATCTCAC+AGG - tig0032298:10161-10180 None:intergenic 60.0%
! TTCTCCTCGGTGATGGCCCT+TGG + tig0032298:10210-10229 Msa1448680:CDS 60.0%
! GCCCGAGGAAGTGCAGCAAA+TGG + tig0032298:10394-10413 Msa1448680:CDS 60.0%
CATCGGTCTCCACGTCAGCC+TGG - tig0032298:6718-6737 None:intergenic 65.0%
GGCTGACGTGGAGACCGATG+AGG + tig0032298:6718-6737 Msa1448680:intron 65.0%
!!! ACTTTTTCAGCCGCCCGGCG+AGG - tig0032298:6988-7007 None:intergenic 65.0%
GCTCGCCCGAATGTTCGGAC+TGG + tig0032298:10118-10137 Msa1448680:CDS 65.0%
! CGGACTGGAAGGCGAGTTGG+AGG + tig0032298:10133-10152 Msa1448680:CDS 65.0%
GGGGATTCTCCGTGCCTCGC+CGG + tig0032298:6971-6990 Msa1448680:CDS 70.0%
GGGATTCTCCGTGCCTCGCC+GGG + tig0032298:6972-6991 Msa1448680:CDS 70.0%
ATTCTCCGTGCCTCGCCGGG+CGG + tig0032298:6975-6994 Msa1448680:CDS 70.0%
GCCGTCGAAGCGCATTGCGG+TGG + tig0032298:9508-9527 Msa1448680:CDS 70.0%
ACGGCCAAGGGCCATCACCG+AGG - tig0032298:10217-10236 None:intergenic 70.0%
TTCAGCCGCCCGGCGAGGCA+CGG - tig0032298:6983-7002 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0032298 gene 4700 10930 4700 ID=Msa1448680;Name=Msa1448680
tig0032298 mRNA 4700 10930 4700 ID=Msa1448680-mRNA-1;Parent=Msa1448680;Name=Msa1448680-mRNA-1;_AED=0.12;_eAED=0.12;_QI=680|0.85|0.86|1|0.92|0.86|15|377|894
tig0032298 exon 4700 5013 4700 ID=Msa1448680-mRNA-1:exon:16553;Parent=Msa1448680-mRNA-1
tig0032298 exon 5034 5442 5034 ID=Msa1448680-mRNA-1:exon:16554;Parent=Msa1448680-mRNA-1
tig0032298 exon 5989 6101 5989 ID=Msa1448680-mRNA-1:exon:16555;Parent=Msa1448680-mRNA-1
tig0032298 exon 6512 6610 6512 ID=Msa1448680-mRNA-1:exon:16556;Parent=Msa1448680-mRNA-1
tig0032298 exon 6719 6775 6719 ID=Msa1448680-mRNA-1:exon:16557;Parent=Msa1448680-mRNA-1
tig0032298 exon 6865 7020 6865 ID=Msa1448680-mRNA-1:exon:16558;Parent=Msa1448680-mRNA-1
tig0032298 exon 7101 7152 7101 ID=Msa1448680-mRNA-1:exon:16559;Parent=Msa1448680-mRNA-1
tig0032298 exon 7316 7397 7316 ID=Msa1448680-mRNA-1:exon:16560;Parent=Msa1448680-mRNA-1
tig0032298 exon 7686 7850 7686 ID=Msa1448680-mRNA-1:exon:16561;Parent=Msa1448680-mRNA-1
tig0032298 exon 7938 8060 7938 ID=Msa1448680-mRNA-1:exon:16562;Parent=Msa1448680-mRNA-1
tig0032298 exon 8220 8295 8220 ID=Msa1448680-mRNA-1:exon:16563;Parent=Msa1448680-mRNA-1
tig0032298 exon 8469 8616 8469 ID=Msa1448680-mRNA-1:exon:16564;Parent=Msa1448680-mRNA-1
tig0032298 exon 8766 9946 8766 ID=Msa1448680-mRNA-1:exon:16565;Parent=Msa1448680-mRNA-1
tig0032298 exon 10044 10234 10044 ID=Msa1448680-mRNA-1:exon:16566;Parent=Msa1448680-mRNA-1
tig0032298 exon 10355 10930 10355 ID=Msa1448680-mRNA-1:exon:16567;Parent=Msa1448680-mRNA-1
tig0032298 five_prime_UTR 4700 5013 4700 ID=Msa1448680-mRNA-1:five_prime_utr;Parent=Msa1448680-mRNA-1
tig0032298 five_prime_UTR 5034 5399 5034 ID=Msa1448680-mRNA-1:five_prime_utr;Parent=Msa1448680-mRNA-1
tig0032298 CDS 5400 5442 5400 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 5989 6101 5989 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 6512 6610 6512 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 6719 6775 6719 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 6865 7020 6865 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 7101 7152 7101 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 7316 7397 7316 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 7686 7850 7686 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 7938 8060 7938 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 8220 8295 8220 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 8469 8616 8469 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 8766 9946 8766 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 10044 10234 10044 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 CDS 10355 10553 10355 ID=Msa1448680-mRNA-1:cds;Parent=Msa1448680-mRNA-1
tig0032298 three_prime_UTR 10554 10930 10554 ID=Msa1448680-mRNA-1:three_prime_utr;Parent=Msa1448680-mRNA-1
Gene Sequence

>Msa1448680

ATGAGACTCTCTTCAGCTGGTTTTAGTCCTCCACCCCAAGAAGGGGAAAAGAGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTCTCTTTGCCAGCAGTTGGAAGTAGAGTTGTGTACTTTCCACAAGGTCACAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTCGATGCACATATCCCAAACTATCCAAGCTTACCTCCTCAGCTTATTTGTCAACTTCATAATTTGACTATGCATGCTGACGTGGAGACCGATGAGGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGCTGGGAACTCCAAGTAAACAGCCGACAAACTACTTTTGCAAGACCTTGACTGCTAGTGACACAAGCACTCACGGGGGATTCTCCGTGCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCTTTGGATTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATAGCAAGGGATTTGCATGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGAATGAAAAGAACCAATTGCTTCTTGGTATCCGCCGTGCTAGCAGACCACAAACTGTGATGCCTTCCTCAGTACTGTCAAGTGATAGTATGCACTTGGGACTTCTTGCTGCAGCAGCTCATGCGGCTGCAACCAATAGCCGTTTCACTATTTTCTATAACCCACGTGCGTGTCCATCCGAATTTGTCATACCCTTGGCGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGTTTCAGGATGCTCTTTGAAACAGAGGAGTCTAGTGTGCGACGATACATGGGTACAATAACTGGCATTTGTGACCTGGATTCTGTCCGGTGGCAGAACTCACATTGGCGCTCGGTAAAGGTTGGTTGGGATGAATCCACTGCCGGAGAAAGGCAACCTAGAGTGTCTTTGTGGGAAATCGAGCCATTAACAACATTTCCTATGTATCCGTCACCATTCCCTCTCAGGCTTAAACGACCGTGGCCTCCTGGATTGCCTTCGTTCCATGGCATGAAAGATGATGATTTTGGCATGAATTCTCCTTTGTTGTGGCTCCGAGACACGGATAGAGGGCTTCAATCTCTTAATTATCAAGGGATTGGGGTTAATTCTTGGATGCAGCCAAGGTTTGATCCCGCCATGCTTAATATGCAAACCGATATGTATCAAGCTGTGGCTGCTACTGCACTTCAGGACATGAGGACTGTAGTAGATCCTTCCAAACAGCTTCTGGGTTCCTTGCTTCAATTTCAGCAACCACCGAACTTCCCGAACAGGACCGCTGCTTTAATGCAGGCGCAGATGTTGCAACAGTCGCAGCCTCAACAGGCCTTTCAAAATAATAATCAGGAGAGTCAAAATCTGTCGCAATCTCAGCCACAAGCTCAGACTAATCCTCAACAGCATCTACAGCATCAGCACTCATTCAATAATCCACTCCGTCATCATAACCAGCAGCAACAACAAACTCAACAGCAAGTGGTGGATAATAATCAGCAGATTTCTGGTTCGGTCTCTACAATGTCTCAGTTTGTTTCAGCGACTCAACCTCAATCACCACCACCCATGCAAGCTCTCTCTTCATTATGCCATCAGGAGAGTTTTTCTGATTCAAATGTGAACTCTTCAACTACTATTGTTTCTCCTTTGCACAGTATCATGGGTTCATCGTTTCCGCATGATGAATCATCCCACCTTATGAGTCTTCCAAGAACAAGCTCTTGGGTTCCTGTTCAAAATTCAACTGGTTGGCCGTCGAAGCGCATTGCGGTGGATCCACTCCTCTCTTCGGGAGCATCTCAATGTATTCTGCCTCAGGTGGAGCAGTTAGGGCAGGCACAGAATTCATTGTCTCAAAATGTTATTACATTGCCACCGTTTCCTGGTAGGGAGTGCCCAATAGACCAAGAAGGGAGCAATGATCCGCAAAGTAATCTTTTATTCGGTGTCAATATAGATCCCTCATCTCTTCTAATGCATAATGGGATGTCGAACTTTAAGGGGATCAGTGGCAACAACAATGATTCCTCAACCATGTCCTACCATCAATCTTCTAATTACATGAACACCACAGGTGCTGATTCTTCGTTGAATCATGGAGTAACGCCTGGTATTGGTGAACCTGGTTTCTTGCATACCCAGGAAAACGGGGATCAAGGAAACAACCCACTGAACAAGACCTTTGTGAAGGTTTATAAATCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAGCTCGCCCGAATGTTCGGACTGGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTCGTGAATAGTGTATGGTGCATCAAGATACTTTCGCCCGAGGAAGTGCAGCAAATGGGCAACACTGGCCTCGGGCTTTTGAACTCGGTTCCAATTCAAAGGCTCTCAAATAGCATTTGTGATGACTATGTGAGCCGTCAAGATTCAAGAAATCTAAGCAGCGGGATAACAACCGTGGGATCTCTAGACTACTAA
Protein sequence

>Msa1448680

MRLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGQPKRHLLTTGWSVFVSAKRLVAGDSVLNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMNSPLLWLRDTDRGLQSLNYQGIGVNSWMQPRFDPAMLNMQTDMYQAVAATALQDMRTVVDPSKQLLGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNQESQNLSQSQPQAQTNPQQHLQHQHSFNNPLRHHNQQQQQTQQQVVDNNQQISGSVSTMSQFVSATQPQSPPPMQALSSLCHQESFSDSNVNSSTTIVSPLHSIMGSSFPHDESSHLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQAQNSLSQNVITLPPFPGRECPIDQEGSNDPQSNLLFGVNIDPSSLLMHNGMSNFKGISGNNNDSSTMSYHQSSNYMNTTGADSSLNHGVTPGIGEPGFLHTQENGDQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQDSRNLSSGITTVGSLDY*