AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0412790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0412790 MtrunA17_Chr3g0104551 96.644 894 20 1 122 1015 1 884 0.0 1793
Msa0412790 MtrunA17_Chr2g0298121 46.680 964 442 13 122 1015 1 962 0.0 830
Msa0412790 MtrunA17_Chr1g0173371 39.344 976 504 13 127 1015 6 980 0.0 696
Msa0412790 MtrunA17_Chr7g0257461 44.005 759 411 10 122 868 1 757 0.0 647
Msa0412790 MtrunA17_Chr7g0257461 44.318 88 49 0 928 1015 896 983 1.81e-14 78.2
Msa0412790 MtrunA17_Chr4g0072071 43.630 573 262 9 504 1015 32 604 7.22e-150 458
Msa0412790 MtrunA17_Chr4g0072061 50.291 344 153 8 178 512 6 340 8.86e-105 331
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0412790 AT2G29890.1 54.496 912 394 5 122 1015 1 909 0.0 1031
Msa0412790 AT2G29890.5 54.496 912 394 5 122 1015 1 909 0.0 1031
Msa0412790 AT2G29890.2 54.486 914 393 6 122 1015 1 911 0.0 1030
Msa0412790 AT2G29890.3 53.591 933 394 7 122 1015 1 933 0.0 1023
Msa0412790 AT2G29890.4 53.180 912 389 6 122 1015 1 892 0.0 994
Msa0412790 AT4G30160.3 45.492 976 448 13 122 1015 1 974 0.0 833
Msa0412790 AT4G30160.4 45.492 976 448 13 122 1015 1 974 0.0 833
Msa0412790 AT4G30160.1 45.492 976 448 13 122 1015 1 974 0.0 833
Msa0412790 AT4G30160.2 45.076 985 448 14 122 1015 1 983 0.0 826
Msa0412790 AT5G57320.2 43.672 964 471 13 122 1015 1 962 0.0 811
Msa0412790 AT5G57320.1 43.672 964 471 13 122 1015 1 962 0.0 811
Msa0412790 AT2G41740.2 45.491 754 395 8 127 868 4 753 0.0 665
Msa0412790 AT2G41740.2 50.588 85 39 1 934 1015 892 976 5.66e-16 83.6
Msa0412790 AT2G41740.1 45.491 754 395 8 127 868 4 753 0.0 665
Msa0412790 AT2G41740.1 50.588 85 39 1 934 1015 892 976 5.66e-16 83.6
Msa0412790 AT3G57410.6 43.704 810 435 8 127 925 6 805 0.0 662
Msa0412790 AT3G57410.4 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.4 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.1 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.1 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.9 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.9 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.5 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.5 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.3 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.3 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.2 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.2 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.7 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.7 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.8 45.687 742 393 6 122 855 1 740 0.0 661
Msa0412790 AT3G57410.8 55.000 60 27 0 956 1015 906 965 3.36e-12 71.2
Msa0412790 AT3G57410.10 45.908 721 380 6 127 839 6 724 0.0 641

Find 214 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAATAGGCATTGGCTTTA+TGG 0.089873 3_2:-56564933 None:intergenic
CTCATTATGACATTCATTAT+TGG 0.143351 3_2:+56565472 Msa0412790:CDS
CTCCAATTGTAAAGCTATTT+TGG 0.146225 3_2:+56566414 Msa0412790:CDS
CCTTCCATTACAACATAAAT+AGG 0.200635 3_2:-56569677 None:intergenic
GCCAAAGAGAGATTTATATT+TGG 0.210127 3_2:+56569338 Msa0412790:CDS
CTATTGTGATCATATGGTTT+TGG 0.238222 3_2:+56571039 Msa0412790:three_prime_UTR
TTAGGTCGCACTTTACTAAT+TGG 0.251499 3_2:+56567055 Msa0412790:CDS
GTCTCATCCCTTCCATTTCC+TGG 0.267579 3_2:-56567499 None:intergenic
AGTTTGTAGAAAGCAGATTT+TGG 0.272885 3_2:-56570822 None:intergenic
GGAGAGTTCTGGAGTTTATT+TGG 0.279925 3_2:+56566341 Msa0412790:CDS
TTCTCAGTGGATTGGAAGTT+TGG 0.281543 3_2:+56565249 Msa0412790:intron
CCAAAGAGAGATTTATATTT+GGG 0.291213 3_2:+56569339 Msa0412790:CDS
ATGGTACTGTTGCAGATTCT+TGG 0.293856 3_2:+56569872 Msa0412790:intron
TCAAGGAAGTACCTCTCTTT+TGG 0.306231 3_2:-56570671 None:intergenic
GAACAGAAACTAACCATAAC+TGG 0.311530 3_2:-56568034 None:intergenic
AGTAGTCGTCAATTATTCTT+TGG 0.319104 3_2:-56561346 None:intergenic
CTTCAGGTTTGGCGAGTTGA+TGG 0.334974 3_2:+56567397 Msa0412790:intron
TTTGATCGCTGTTCTTCTTT+CGG 0.335184 3_2:-56566714 None:intergenic
CCCAAATATAAATCTCTCTT+TGG 0.338138 3_2:-56569339 None:intergenic
GATTGGAAAGTACCAACTTT+AGG 0.341579 3_2:+56567037 Msa0412790:CDS
TCCAAGTCTTTATTGATAAT+AGG 0.343729 3_2:-56564947 None:intergenic
CAGGGAAAACTTTGTCCAAT+TGG 0.346742 3_2:+56566590 Msa0412790:CDS
GATCCTGCAGCGTTCAATAT+AGG 0.353176 3_2:+56565719 Msa0412790:CDS
CAGAACTATGTATGCACTTC+CGG 0.358688 3_2:-56565330 None:intergenic
ATTCTGATGTCGGAGAGTTC+TGG 0.367136 3_2:+56566330 Msa0412790:CDS
CATTTCCCACATCAATACTA+TGG 0.369751 3_2:+56567991 Msa0412790:CDS
CAGTATACATTTCCAGGAAA+TGG 0.377373 3_2:+56567487 Msa0412790:CDS
TTCCCTTCCCTCACAGATAC+AGG 0.377925 3_2:-56568911 None:intergenic
AGATCCTTCAAAGAGCTTCT+TGG 0.378921 3_2:-56570080 None:intergenic
ATAACCCTGATGTTTGAATA+TGG 0.381023 3_2:-56567221 None:intergenic
GGCTCAGACTATAGGCAATC+AGG 0.381229 3_2:+56570025 Msa0412790:CDS
CTGACACTGGCACCAATTGT+TGG 0.382129 3_2:-56565283 None:intergenic
CTCAGCCATATTCAAACATC+AGG 0.386598 3_2:+56567216 Msa0412790:intron
CACCAAAATAGCTTTACAAT+TGG 0.387240 3_2:-56566416 None:intergenic
TGGATGGCCTGCATATTATC+TGG 0.391767 3_2:-56568543 None:intergenic
GAAGGCGGGTCTCGAGGAAT+TGG 0.392914 3_2:-56566374 None:intergenic
TGTTCTTCTTTCGGTCAATA+AGG 0.393207 3_2:-56566705 None:intergenic
CTTTCTACAAACTCCCTAGA+TGG 0.394348 3_2:+56570832 Msa0412790:CDS
ATCCTGCAGCGTTCAATATA+GGG 0.395581 3_2:+56565720 Msa0412790:CDS
TTGATGCCTGTCACTGGATT+CGG 0.399822 3_2:-56570643 None:intergenic
AATATACTATTGTGATCATA+TGG 0.402145 3_2:+56571033 Msa0412790:three_prime_UTR
TGAAGTAAACACTCCTTCAA+TGG 0.402679 3_2:-56565800 None:intergenic
AGAACATCCCAGAAAATATC+AGG 0.404483 3_2:-56568938 None:intergenic
CATAGTATTGATGTGGGAAA+TGG 0.404508 3_2:-56567990 None:intergenic
TAAACTTGCAGTCTCATTTG+AGG 0.404977 3_2:-56570548 None:intergenic
ACCTTTGGCTCTTTCTTGAA+TGG 0.408574 3_2:-56566120 None:intergenic
CCTTGAATATGATTAGCCTT+TGG 0.412583 3_2:-56568327 None:intergenic
CTTAAATTCAGGAGACTTCA+AGG 0.415343 3_2:+56569162 Msa0412790:intron
CTTGAGTTGGATGCAGCCTT+AGG 0.418274 3_2:+56565697 Msa0412790:CDS
ATCTAGAAGTAGTCCAGTTA+TGG 0.421090 3_2:+56568021 Msa0412790:CDS
CTGAATGTATTGCTTCCAAT+TGG 0.422885 3_2:-56566605 None:intergenic
TCAAGAAAGAGCCAAAGGTT+TGG 0.424877 3_2:+56566124 Msa0412790:CDS
GTAGTACAGTATACATTTCC+AGG 0.425304 3_2:+56567481 Msa0412790:CDS
TCGAGACCCGCCTTCTAGTC+AGG 0.426033 3_2:+56566382 Msa0412790:CDS
TTGAACAACCTCCAAACCTT+TGG 0.426187 3_2:-56566135 None:intergenic
AGTTTGCAGAATATAGCAAT+AGG 0.429248 3_2:-56568688 None:intergenic
CTTCCATTACAACATAAATA+GGG 0.429870 3_2:-56569676 None:intergenic
TTATGACATTCATTATTGGC+TGG 0.432853 3_2:+56565476 Msa0412790:CDS
CAATGTTTCGTCGTCGGTAC+CGG 0.435890 3_2:+56561396 Msa0412790:CDS
GTAGCACTGTTTCGAGTTCA+AGG 0.436359 3_2:+56568513 Msa0412790:CDS
CCAAAGGCTAATCATATTCA+AGG 0.436661 3_2:+56568327 Msa0412790:CDS
AGTCCCTATTTATGTTGTAA+TGG 0.441768 3_2:+56569673 Msa0412790:CDS
GCCACGGATTCCTGACTAGA+AGG 0.442065 3_2:-56566392 None:intergenic
GCTCCTGCAGTTTGAAATGC+AGG 0.442482 3_2:-56564971 None:intergenic
AGTCAGCCTGTACACTTGTA+AGG 0.444865 3_2:+56565852 Msa0412790:CDS
GGCTCATCATCCACTTCATC+AGG 0.445910 3_2:-56567259 None:intergenic
GTAGAGGATGGAAAATTTGT+TGG 0.447312 3_2:+56566305 Msa0412790:intron
AAATGTCGTATGAGTCTTGT+CGG 0.447714 3_2:-56567004 None:intergenic
TCAAAGAGCTTCTTGGCCGC+TGG 0.450310 3_2:-56570073 None:intergenic
ATTGGCTGCATCAACTCGTT+GGG 0.453149 3_2:-56561476 None:intergenic
AAGTAGGCTTCGATATCAAA+AGG 0.453631 3_2:-56561200 None:intergenic
CTGGGATGTTCTTGGTGGAA+AGG 0.455929 3_2:+56568949 Msa0412790:CDS
CCTTGACAGGATAAATCTAC+AGG 0.457547 3_2:+56566571 Msa0412790:intron
ACTTTATATTCTCAGTGGAT+TGG 0.458509 3_2:+56565241 Msa0412790:intron
CAGTTCTGTTGCTGAAGAAT+CGG 0.458599 3_2:-56570521 None:intergenic
CCATTCTATCAAGAAGAGTA+TGG 0.460217 3_2:-56568758 None:intergenic
TATTGGCTGCATCAACTCGT+TGG 0.461641 3_2:-56561477 None:intergenic
ACTACTTCTTCGACGGCCAT+TGG 0.461985 3_2:-56569981 None:intergenic
GGAGGTTGTTCAATATATCA+AGG 0.463674 3_2:+56566145 Msa0412790:CDS
TTACCAGCACTGTTATTAGC+AGG 0.464732 3_2:-56570103 None:intergenic
ACCGTTAGGGGTAGAGTCCC+TGG 0.464907 3_2:-56569936 None:intergenic
GTTAAATTGATGCCTGTCAC+TGG 0.465308 3_2:-56570649 None:intergenic
GGAGTGCAGGCTCAGACTAT+AGG 0.467038 3_2:+56570017 Msa0412790:CDS
GTGCCGCTGCGATCTATAGA+TGG 0.468107 3_2:-56567280 None:intergenic
GAAATGGATGTCCTTGTTGA+AGG 0.468405 3_2:+56569638 Msa0412790:CDS
TACATTCAGCAAAGAAATGC+TGG 0.469130 3_2:+56566619 Msa0412790:CDS
TTCCCTATATTGAACGCTGC+AGG 0.470458 3_2:-56565722 None:intergenic
ATCGTCGTACGTAGGCTCAT+TGG 0.471124 3_2:-56561372 None:intergenic
CCTTGTTTAATACCCATTGA+AGG 0.471785 3_2:+56565787 Msa0412790:CDS
AGAGAGATTTATATTTGGGT+TGG 0.471935 3_2:+56569343 Msa0412790:CDS
GAAGTAAACACTCCTTCAAT+GGG 0.472686 3_2:-56565799 None:intergenic
TAGTCTGAGCCTGCACTCCT+AGG 0.476520 3_2:-56570013 None:intergenic
ACCACTCGAAGTTGCTCGTA+AGG 0.476879 3_2:-56570616 None:intergenic
GCAGCTATGTATACATGGAT+TGG 0.478295 3_2:+56568714 Msa0412790:CDS
CTGAAGCAGCTATGTATACA+TGG 0.481079 3_2:+56568709 Msa0412790:CDS
GCGGCCAAGAAGCTCTTTGA+AGG 0.484361 3_2:+56570076 Msa0412790:CDS
CCATACTCTTCTTGATAGAA+TGG 0.486081 3_2:+56568758 Msa0412790:CDS
TATGGTCTCTTGCGGAAGAA+AGG 0.487926 3_2:-56568740 None:intergenic
TATGACATTCATTATTGGCT+GGG 0.489091 3_2:+56565477 Msa0412790:CDS
AAATGTGAGGTGGCCACAAT+AGG 0.493307 3_2:+56566185 Msa0412790:CDS
CAATTCTGAAAGGAAACTCC+AGG 0.494273 3_2:+56569918 Msa0412790:CDS
CAAGTGTTGCTTCAAGTTGG+TGG 0.495981 3_2:+56564899 Msa0412790:CDS
GGCGGAATATCCAAAAGAAA+AGG 0.498002 3_2:+56568970 Msa0412790:CDS
CCAAAAGAAAAGGAGATTCA+AGG 0.498307 3_2:+56568980 Msa0412790:CDS
TTCAATGATGACCTCAGAAA+AGG 0.498959 3_2:-56566032 None:intergenic
GAGACTAGGCTTTACGAAGA+AGG 0.499203 3_2:+56567090 Msa0412790:CDS
GTGTATTGAAAACCAACAAT+TGG 0.501350 3_2:+56565271 Msa0412790:CDS
CGAAGGTCTGACTCTGACAC+TGG 0.501618 3_2:-56565296 None:intergenic
CCTATTTATGTTGTAATGGA+AGG 0.503156 3_2:+56569677 Msa0412790:CDS
AGAAAGAGCCAAAGGTTTGG+AGG 0.505490 3_2:+56566127 Msa0412790:CDS
GATCCTGCATTTCAAACTGC+AGG 0.511602 3_2:+56564968 Msa0412790:CDS
AGCTTCTTGGCCGCTGGAGT+AGG 0.512626 3_2:-56570067 None:intergenic
TTGAACGCTGCAGGATCCTA+AGG 0.513188 3_2:-56565713 None:intergenic
CTATGTTGTCCACGTGAAAG+AGG 0.515019 3_2:+56565879 Msa0412790:CDS
GACCTTCGAAAATTCTATAC+CGG 0.522930 3_2:+56565311 Msa0412790:CDS
CCTTCAATGGGTATTAAACA+AGG 0.525933 3_2:-56565787 None:intergenic
GCATCGTCGTACGATTTATC+CGG 0.526597 3_2:-56561415 None:intergenic
GCTTCTTGGCCGCTGGAGTA+GGG 0.526859 3_2:-56570066 None:intergenic
GCCTATTATCAATAAAGACT+TGG 0.530965 3_2:+56564946 Msa0412790:CDS
TCACCTCTACCTAGGAGTGC+AGG 0.534318 3_2:+56570004 Msa0412790:CDS
TCTTTATTGATAATAGGCAT+TGG 0.537651 3_2:-56564941 None:intergenic
AATCAAGTGTTGCTTCAAGT+TGG 0.542647 3_2:+56564896 Msa0412790:CDS
AAGTGCCTTGTCTGATGCCA+AGG 0.543362 3_2:-56565677 None:intergenic
GTTCAATATAGGGAAATTCA+AGG 0.543419 3_2:+56565730 Msa0412790:CDS
GCTGGGAAATGACACAAAGA+AGG 0.546293 3_2:+56565494 Msa0412790:CDS
TTTGCAGGTGGATTCAACCT+TGG 0.549662 3_2:+56565660 Msa0412790:intron
AAGAAGTGTATAGAAGAAAA+CGG 0.549673 3_2:+56568459 Msa0412790:CDS
TTTGTTGGTGATTCTGATGT+CGG 0.550256 3_2:+56566320 Msa0412790:CDS
CGGATTCCTGACTAGAAGGC+GGG 0.550672 3_2:-56566388 None:intergenic
TCGTACGACGATGCAATCGT+TGG 0.551643 3_2:+56561424 Msa0412790:CDS
GGCTCAAATTCATGAGGGCA+AGG 0.552861 3_2:+56568279 Msa0412790:intron
CCATACTTGATCGACTTGGA+TGG 0.553177 3_2:-56568559 None:intergenic
GAACTCGAAACAGTGCTACC+AGG 0.554752 3_2:-56568509 None:intergenic
AATCAACCATAGTATTGATG+TGG 0.556589 3_2:-56567997 None:intergenic
TGTGGTCGGTAACTGAAAGA+AGG 0.557636 3_2:-56567432 None:intergenic
ATCAGACAAGGCACTTGAGT+TGG 0.559150 3_2:+56565684 Msa0412790:CDS
AGAAGCTCTCAACCTCGGCT+TGG 0.559559 3_2:+56569393 Msa0412790:CDS
GTTTCTCCGAATCCAGTGAC+AGG 0.560444 3_2:+56570637 Msa0412790:CDS
GAGTTCTGGAGTTTATTTGG+TGG 0.561657 3_2:+56566344 Msa0412790:CDS
GAGCCTGCACTCCTAGGTAG+AGG 0.564574 3_2:-56570007 None:intergenic
GAAAGAACTTCCTGATGAAG+TGG 0.566535 3_2:+56567249 Msa0412790:CDS
TAGCTTTACAATTGGAGCCA+CGG 0.566708 3_2:-56566408 None:intergenic
AGTAAAGTGCGACCTAAAGT+TGG 0.566921 3_2:-56567049 None:intergenic
GCTCAGACTATAGGCAATCA+GGG 0.567471 3_2:+56570026 Msa0412790:CDS
TACCTGTATCTGTGAGGGAA+GGG 0.569592 3_2:+56568909 Msa0412790:CDS
TACAAGTCCAGATAATATGC+AGG 0.569774 3_2:+56568536 Msa0412790:CDS
TGAACCATACTTGATCGACT+TGG 0.572402 3_2:-56568563 None:intergenic
ACTGTAAAGTCTCGTGTGGT+CGG 0.573842 3_2:-56567446 None:intergenic
GGAGTGTTTACTTCAAAGCA+AGG 0.574599 3_2:+56565808 Msa0412790:CDS
AGTCTCCCTTACAAGTGTAC+AGG 0.574613 3_2:-56565858 None:intergenic
ACCATTCAAGAAAGAGCCAA+AGG 0.574717 3_2:+56566119 Msa0412790:CDS
CTACCTGTATCTGTGAGGGA+AGG 0.575928 3_2:+56568908 Msa0412790:CDS
AGCGGTTCTATCATTTCCAA+TGG 0.578457 3_2:+56569965 Msa0412790:CDS
TCTCCTGCTAATAACAGTGC+TGG 0.579258 3_2:+56570100 Msa0412790:CDS
CCCTTACGAGCAACTTCGAG+TGG 0.581361 3_2:+56570615 Msa0412790:CDS
AGAAAGCTTGCAATTCTGAA+AGG 0.583090 3_2:+56569908 Msa0412790:CDS
ATACATTTCCAGGAAATGGA+AGG 0.583532 3_2:+56567491 Msa0412790:CDS
AGTAGTTATCACTACTTGAA+AGG 0.584864 3_2:-56561450 None:intergenic
TGAAACTCACAATGAAAACC+TGG 0.590439 3_2:+56568491 Msa0412790:CDS
TGACTAGAAGGCGGGTCTCG+AGG 0.593017 3_2:-56566380 None:intergenic
TTCAACCTTGGCATCAGACA+AGG 0.595130 3_2:+56565672 Msa0412790:CDS
TCCAGGGACTCTACCCCTAA+CGG 0.597480 3_2:+56569935 Msa0412790:CDS
TCAAAGCAAGGGAATTTGAA+CGG 0.597919 3_2:+56565820 Msa0412790:CDS
AGTAGGCTTCGATATCAAAA+GGG 0.598860 3_2:-56561199 None:intergenic
GCCTTCTAGTCAGGAATCCG+TGG 0.600268 3_2:+56566391 Msa0412790:CDS
GTGGTCGGTAACTGAAAGAA+GGG 0.601473 3_2:-56567431 None:intergenic
ACCCCTAACGGTCACAAAAG+CGG 0.603179 3_2:+56569947 Msa0412790:CDS
TTTGCATTGAAAATAACCAA+AGG 0.603205 3_2:+56569025 Msa0412790:CDS
CAATAATGAATGTCATAATG+AGG 0.605850 3_2:-56565471 None:intergenic
GAAGTAGTTCACCTCTACCT+AGG 0.605938 3_2:+56569996 Msa0412790:CDS
CTTGACAGGATAAATCTACA+GGG 0.607872 3_2:+56566572 Msa0412790:intron
GGCCTAAAACAGTTGAGACT+AGG 0.609206 3_2:+56567076 Msa0412790:CDS
ACAGATACAGGTAGCTGTGT+CGG 0.609783 3_2:-56568899 None:intergenic
GTCAGCCTGTACACTTGTAA+GGG 0.610218 3_2:+56565853 Msa0412790:CDS
TATATCAAGGAGAATAAGCA+TGG 0.611519 3_2:+56566158 Msa0412790:CDS
ATCAACCATAGTATTGATGT+GGG 0.613721 3_2:-56567996 None:intergenic
AATGAATGTCATAATGAGGA+GGG 0.613936 3_2:-56565467 None:intergenic
GTATATATTCCAACCTATTG+TGG 0.614583 3_2:-56566198 None:intergenic
GAGGTGAACTACTTCTTCGA+CGG 0.616812 3_2:-56569988 None:intergenic
TACATTTCCAGGAAATGGAA+GGG 0.620368 3_2:+56567492 Msa0412790:CDS
CATCAATTTAACCAAAAGAG+AGG 0.620702 3_2:+56570660 Msa0412790:CDS
AAACAAGAAGCTCTCAACCT+CGG 0.620869 3_2:+56569388 Msa0412790:CDS
TAATGAATGTCATAATGAGG+AGG 0.621615 3_2:-56565468 None:intergenic
GCTTGGCAGTAGATGTGTAA+TGG 0.622048 3_2:+56567537 Msa0412790:CDS
AAGAAGAGTATGGTCTCTTG+CGG 0.622129 3_2:-56568748 None:intergenic
CTCCACTGTAAAGTCTCGTG+TGG 0.622562 3_2:-56567450 None:intergenic
CCACTCGAAGTTGCTCGTAA+GGG 0.623058 3_2:-56570615 None:intergenic
TAGAGTTGCATCCACTGAAG+AGG 0.626531 3_2:-56566097 None:intergenic
CACAACACACCTCTTTCACG+TGG 0.629912 3_2:-56565888 None:intergenic
GGATGTTCTTGGTGGAAAGG+CGG 0.631780 3_2:+56568952 Msa0412790:CDS
TACTCTTCTTGATAGAATGG+TGG 0.633256 3_2:+56568761 Msa0412790:CDS
GAGTGTTTACTTCAAAGCAA+GGG 0.638785 3_2:+56565809 Msa0412790:CDS
ACAGCTACCTGTATCTGTGA+GGG 0.639394 3_2:+56568904 Msa0412790:CDS
ACGATGCAATGTTTCGTCGT+CGG 0.646114 3_2:+56561390 Msa0412790:CDS
AGTATTGATGTGGGAAATGG+CGG 0.649562 3_2:-56567987 None:intergenic
TCAGCCATATTCAAACATCA+GGG 0.651624 3_2:+56567217 Msa0412790:intron
TTTCAGGCTCAAATTCATGA+GGG 0.655832 3_2:+56568274 Msa0412790:intron
GTGTATAGAAGAAAACGGTA+CGG 0.656301 3_2:+56568464 Msa0412790:CDS
TATAGAAGAAAACGGTACGG+TGG 0.667721 3_2:+56568467 Msa0412790:CDS
ACGGATTCCTGACTAGAAGG+CGG 0.672389 3_2:-56566389 None:intergenic
CACAGCTACCTGTATCTGTG+AGG 0.674781 3_2:+56568903 Msa0412790:CDS
AATTCTGAAAGGAAACTCCA+GGG 0.675066 3_2:+56569919 Msa0412790:CDS
AGAGATATACAATTATACAC+AGG 0.675067 3_2:+56569279 Msa0412790:CDS
GCAGACAACTTACCAAGCCG+AGG 0.675394 3_2:-56569405 None:intergenic
AACATTGCATCGTCGTACGT+AGG 0.679050 3_2:-56561380 None:intergenic
ATCAAGGAGAATAAGCATGG+TGG 0.687236 3_2:+56566161 Msa0412790:CDS
GTTGCTGAAGAATCGGACAG+TGG 0.690958 3_2:-56570514 None:intergenic
CTAGCGATAAGCCTTCAACA+AGG 0.711385 3_2:-56569649 None:intergenic
TTTCAATAGAGATCATGCAG+TGG 0.722465 3_2:+56561319 Msa0412790:CDS
GAGCCATCTATAGATCGCAG+CGG 0.737750 3_2:+56567277 Msa0412790:CDS
GCATGGTGGAAAATGTGAGG+TGG 0.742790 3_2:+56566175 Msa0412790:CDS
TAAGCATGGTGGAAAATGTG+AGG 0.745510 3_2:+56566172 Msa0412790:CDS
GACCACACGAGACTTTACAG+TGG 0.762994 3_2:+56567448 Msa0412790:CDS
GCATGCATAATACACTCACG+AGG 0.773779 3_2:-56570962 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTGTAATAAATTAATAA+AGG + chr3_2:56561724-56561743 Msa0412790:intron 10.0%
!! GATTGTAATAAATTAATAAA+GGG + chr3_2:56561725-56561744 Msa0412790:intron 10.0%
!!! TGAATTATTTTTTCTATTTT+TGG - chr3_2:56562136-56562155 None:intergenic 10.0%
!! TTATTATCAATCAATATATT+AGG + chr3_2:56562250-56562269 Msa0412790:intron 10.0%
!!! CTAATATTATTATTTTTTGT+TGG - chr3_2:56562293-56562312 None:intergenic 10.0%
!! CAACAAAAAATAATAATATT+AGG + chr3_2:56562291-56562310 Msa0412790:intron 10.0%
!!! ATAGAATTAAAAGAATTTTA+AGG - chr3_2:56566795-56566814 None:intergenic 10.0%
!!! AAAGTTAAATTTTGATTATA+CGG - chr3_2:56568210-56568229 None:intergenic 10.0%
!!! AAAAGATATTTTTTAAGAAT+TGG - chr3_2:56568412-56568431 None:intergenic 10.0%
!!! AAAAAATATCTTTTTTTAAG+GGG + chr3_2:56568418-56568437 Msa0412790:intron 10.0%
!!! TAATTTTTTTATTCTCATAT+CGG + chr3_2:56570737-56570756 Msa0412790:intron 10.0%
!! TATCATTATTTAACATATCA+AGG - chr3_2:56561600-56561619 None:intergenic 15.0%
!! ACACAAATATATGTTAAATA+CGG + chr3_2:56561642-56561661 Msa0412790:intron 15.0%
!! AATATTTAAGGAATCAAAAA+AGG - chr3_2:56561881-56561900 None:intergenic 15.0%
!! TATTAAATAGTTGTCAAAAA+GGG - chr3_2:56562194-56562213 None:intergenic 15.0%
!! GTTAAAACACTTAAATTAAA+TGG - chr3_2:56562524-56562543 None:intergenic 15.0%
!!! CAAATTTAGACATTTTTAAA+TGG - chr3_2:56562553-56562572 None:intergenic 15.0%
!! CATTTAAAAATGTCTAAATT+TGG + chr3_2:56562551-56562570 Msa0412790:intron 15.0%
!!! ACGCAAAATTTTTAAAATTT+AGG + chr3_2:56562676-56562695 Msa0412790:intron 15.0%
!!! CCAATTAAAAATTATGTTTT+TGG - chr3_2:56562992-56563011 None:intergenic 15.0%
!!! CCAAAAACATAATTTTTAAT+TGG + chr3_2:56562989-56563008 Msa0412790:intron 15.0%
!!! ATTGATTCTATAATTATTAC+CGG + chr3_2:56564679-56564698 Msa0412790:intron 15.0%
!! TTGTTTACTAAAAAGAAATT+TGG - chr3_2:56566829-56566848 None:intergenic 15.0%
!! AATATAACTATATGAAACAT+CGG + chr3_2:56566875-56566894 Msa0412790:intron 15.0%
!! TTCAGAAAATAATCTAATAT+TGG - chr3_2:56567638-56567657 None:intergenic 15.0%
!!! ATATTAGATTATTTTCTGAA+AGG + chr3_2:56567638-56567657 Msa0412790:intron 15.0%
!!! AAAAATATCTTTTTTTAAGG+GGG + chr3_2:56568419-56568438 Msa0412790:intron 15.0%
!!! TCATCTATTAAATTTTTTGT+AGG + chr3_2:56568644-56568663 Msa0412790:intron 15.0%
!! AATTAGTGAATATTGAATAA+TGG - chr3_2:56569472-56569491 None:intergenic 15.0%
!! CAGATACAAAAAATATATTT+GGG - chr3_2:56571111-56571130 None:intergenic 15.0%
!! ACAGATACAAAAAATATATT+TGG - chr3_2:56571112-56571131 None:intergenic 15.0%
!! AACAGGTAAAAAATATATTT+GGG - chr3_2:56571187-56571206 None:intergenic 15.0%
!! AAACAGGTAAAAAATATATT+TGG - chr3_2:56571188-56571207 None:intergenic 15.0%
!! CACAAATATATGTTAAATAC+GGG + chr3_2:56561643-56561662 Msa0412790:intron 20.0%
!! TTAAAGTAGTAACTTTATCT+TGG + chr3_2:56561787-56561806 Msa0412790:intron 20.0%
!! ACTCAATAATAGTGTTATAT+TGG - chr3_2:56561997-56562016 None:intergenic 20.0%
!! TATAACACTATTATTGAGTT+TGG + chr3_2:56561998-56562017 Msa0412790:intron 20.0%
!! ATAACACTATTATTGAGTTT+GGG + chr3_2:56561999-56562018 Msa0412790:intron 20.0%
!! CTATTAAATAGTTGTCAAAA+AGG - chr3_2:56562195-56562214 None:intergenic 20.0%
!! GTTAACGCAATTTAAATAAA+TGG + chr3_2:56562214-56562233 Msa0412790:intron 20.0%
!! AAGTGAATAGGTAAAAATTA+TGG + chr3_2:56562383-56562402 Msa0412790:intron 20.0%
!!! GTTAATCACTTTTAAATTCA+TGG + chr3_2:56562405-56562424 Msa0412790:intron 20.0%
!! GGTTGAATACTTAAAATATA+TGG - chr3_2:56562503-56562522 None:intergenic 20.0%
!! TTAAAAATGTCTAAATTTGG+TGG + chr3_2:56562554-56562573 Msa0412790:intron 20.0%
!!! TCTATTTTCATTCATATGTT+AGG + chr3_2:56562877-56562896 Msa0412790:intron 20.0%
!! AGAATAATGATAACATAGTT+TGG - chr3_2:56563654-56563673 None:intergenic 20.0%
!! ATACATGAAAAAAAGTCAAA+GGG - chr3_2:56563890-56563909 None:intergenic 20.0%
!!! GATTTTTTTTTTGAGAATTG+AGG + chr3_2:56564027-56564046 Msa0412790:intron 20.0%
!!! ATAAACAATTATTTTCACCT+AGG - chr3_2:56564238-56564257 None:intergenic 20.0%
!! TATAGTAAATATATCAACGT+AGG - chr3_2:56564821-56564840 None:intergenic 20.0%
!! ATTTACTATATGAAAACTTC+TGG + chr3_2:56564831-56564850 Msa0412790:intron 20.0%
!! TTTCAAAGAAAATCATTGTA+AGG - chr3_2:56565007-56565026 None:intergenic 20.0%
!!! ATTGTGCTTATATTTTTGTT+AGG + chr3_2:56566007-56566026 Msa0412790:intron 20.0%
!! TAACTATACAATTATTGTAG+AGG + chr3_2:56566289-56566308 Msa0412790:intron 20.0%
!!! TTTTAAGGATATATAAACGA+TGG - chr3_2:56566780-56566799 None:intergenic 20.0%
!! TAACACAATTAAATTGTGAA+TGG - chr3_2:56567141-56567160 None:intergenic 20.0%
!!! AAAATATCTTTTTTTAAGGG+GGG + chr3_2:56568420-56568439 Msa0412790:intron 20.0%
!!! GATTCTTAAATTTTTCTTCA+TGG + chr3_2:56568588-56568607 Msa0412790:intron 20.0%
!! ATTTATTGGAACTTAAATTC+AGG + chr3_2:56569151-56569170 Msa0412790:intron 20.0%
!! TACCACTTATTAATTGAATT+CGG + chr3_2:56569218-56569237 Msa0412790:intron 20.0%
!! ATTTACTGATGAATAAAATG+AGG + chr3_2:56569518-56569537 Msa0412790:intron 20.0%
!!! TTGTTATAAGCAGAAATTTT+TGG + chr3_2:56569616-56569635 Msa0412790:intron 20.0%
!!! CATATCATAAGTTGATAAAA+AGG - chr3_2:56570136-56570155 None:intergenic 20.0%
!! CAACTTATGATATGAAATTT+AGG + chr3_2:56570142-56570161 Msa0412790:intron 20.0%
!!! CTAAACTTTTTATCTAAACA+AGG + chr3_2:56570402-56570421 Msa0412790:intron 20.0%
!! AGAAAAATAACAATGATGAA+AGG - chr3_2:56570465-56570484 None:intergenic 20.0%
!! AATATACTATTGTGATCATA+TGG + chr3_2:56571033-56571052 Msa0412790:three_prime_UTR 20.0%
!!! TATGATGTGATTTTTGTTTT+AGG + chr3_2:56571154-56571173 Msa0412790:three_prime_UTR 20.0%
!!! TTTTACCTGTTTTTACTTTT+AGG + chr3_2:56571196-56571215 Msa0412790:three_prime_UTR 20.0%
!!! TTTTTTATCAAGTGTCCTTA+GGG - chr3_2:56561766-56561785 None:intergenic 25.0%
! ATTCCTTAAATATTGCCTTA+AGG + chr3_2:56561887-56561906 Msa0412790:intron 25.0%
! TTCCTTAAATATTGCCTTAA+GGG + chr3_2:56561888-56561907 Msa0412790:intron 25.0%
! TAGCAAAACCCATTAATAAA+AGG + chr3_2:56561918-56561937 Msa0412790:intron 25.0%
! AAGTCTATTTATCAAAGTCA+AGG - chr3_2:56561963-56561982 None:intergenic 25.0%
! ATGACATAATAGATTAGAAG+AGG - chr3_2:56562036-56562055 None:intergenic 25.0%
! AACCATATATGTAAGTGAAT+AGG + chr3_2:56562371-56562390 Msa0412790:intron 25.0%
! TACCTATTCACTTACATATA+TGG - chr3_2:56562376-56562395 None:intergenic 25.0%
! TAATCGAAAAGCAATTATAG+TGG + chr3_2:56563013-56563032 Msa0412790:intron 25.0%
!!! ATTACCCTTCATTTTTTTCT+AGG + chr3_2:56563095-56563114 Msa0412790:intron 25.0%
! GTATCCTAGAAAAAAATGAA+GGG - chr3_2:56563102-56563121 None:intergenic 25.0%
! TTCATCAAACATATACATAG+TGG + chr3_2:56563509-56563528 Msa0412790:intron 25.0%
!! AACTAAAAAAGCAACTTTTG+TGG + chr3_2:56563538-56563557 Msa0412790:intron 25.0%
! TTTATAGTCCAAGTTGTAAT+GGG - chr3_2:56563566-56563585 None:intergenic 25.0%
!!! GATGGTAAAATGTCATTTTT+AGG - chr3_2:56563677-56563696 None:intergenic 25.0%
! GATACATGAAAAAAAGTCAA+AGG - chr3_2:56563891-56563910 None:intergenic 25.0%
! AAAAGTGATGATCTCATATT+TGG - chr3_2:56563954-56563973 None:intergenic 25.0%
!! GATGTTTGAAATTTGATGTA+TGG + chr3_2:56564130-56564149 Msa0412790:intron 25.0%
! ATAAAATTCTGCGAATTCTT+AGG + chr3_2:56564212-56564231 Msa0412790:intron 25.0%
!! TCTTTATTGATAATAGGCAT+TGG - chr3_2:56564944-56564963 None:intergenic 25.0%
!! TCCAAGTCTTTATTGATAAT+AGG - chr3_2:56564950-56564969 None:intergenic 25.0%
! AGAAAATCATTGTAAGGATA+CGG - chr3_2:56565001-56565020 None:intergenic 25.0%
! AGACATTCATTTAATCGATA+AGG - chr3_2:56565076-56565095 None:intergenic 25.0%
! ACTTAACTTTATATTCTCAG+TGG + chr3_2:56565236-56565255 Msa0412790:intron 25.0%
! CAATAATGAATGTCATAATG+AGG - chr3_2:56565474-56565493 None:intergenic 25.0%
! CTCATTATGACATTCATTAT+TGG + chr3_2:56565472-56565491 Msa0412790:CDS 25.0%
!!! AGAAGGTTTGTTTTATTTCT+TGG + chr3_2:56565511-56565530 Msa0412790:intron 25.0%
! TATACAATTATTGTAGAGGA+TGG + chr3_2:56566293-56566312 Msa0412790:intron 25.0%
!! CATATTTGCACAATATTTTC+AGG + chr3_2:56566448-56566467 Msa0412790:intron 25.0%
!!! GTGATAATGAAATTTTTGTG+TGG + chr3_2:56566669-56566688 Msa0412790:CDS 25.0%
!! TAATGAAATTTTTGTGTGGA+TGG + chr3_2:56566673-56566692 Msa0412790:CDS 25.0%
!! AATGAAATTTTTGTGTGGAT+GGG + chr3_2:56566674-56566693 Msa0412790:CDS 25.0%
! TTACCTGTAATTCATAGAAA+TGG + chr3_2:56567603-56567622 Msa0412790:intron 25.0%
! AATCCATTTCTATGAATTAC+AGG - chr3_2:56567609-56567628 None:intergenic 25.0%
!! TCTTGATAACTTTAAACACA+AGG + chr3_2:56567921-56567940 Msa0412790:intron 25.0%
!!! CAACGTTCAAATTTTTGTTT+TGG + chr3_2:56568108-56568127 Msa0412790:intron 25.0%
! TGCAAATTGAATAAATAGTG+AGG - chr3_2:56568244-56568263 None:intergenic 25.0%
!! AAGAAGTGTATAGAAGAAAA+CGG + chr3_2:56568459-56568478 Msa0412790:CDS 25.0%
! TATCTAGATGATATCTTCAT+AGG + chr3_2:56568831-56568850 Msa0412790:intron 25.0%
!! ATTTTCAATGCAAACAAATG+TGG - chr3_2:56569019-56569038 None:intergenic 25.0%
! TTTGCATTGAAAATAACCAA+AGG + chr3_2:56569025-56569044 Msa0412790:CDS 25.0%
!!! AAGATTGATTTTGTTACCTT+TGG - chr3_2:56569044-56569063 None:intergenic 25.0%
! AAAATAATCTAGATCTCACT+TGG + chr3_2:56569070-56569089 Msa0412790:intron 25.0%
! AACCGAATTCAATTAATAAG+TGG - chr3_2:56569223-56569242 None:intergenic 25.0%
! AGAGATATACAATTATACAC+AGG + chr3_2:56569279-56569298 Msa0412790:CDS 25.0%
! CCAAAGAGAGATTTATATTT+GGG + chr3_2:56569339-56569358 Msa0412790:CDS 25.0%
! CAGTAAATTAGTTATGAAGA+TGG - chr3_2:56569506-56569525 None:intergenic 25.0%
!! TTTCATTGTAGTATGGATTA+TGG + chr3_2:56569555-56569574 Msa0412790:intron 25.0%
!!! TAAGCAGAAATTTTTGGAAA+TGG + chr3_2:56569622-56569641 Msa0412790:intron 25.0%
! CTTCCATTACAACATAAATA+GGG - chr3_2:56569679-56569698 None:intergenic 25.0%
! ATGGTATTATGATCATTGAT+CGG - chr3_2:56569788-56569807 None:intergenic 25.0%
! ATCCATCTTATTAAGTATGT+TGG + chr3_2:56569844-56569863 Msa0412790:intron 25.0%
! TCCATCTTATTAAGTATGTT+GGG + chr3_2:56569845-56569864 Msa0412790:intron 25.0%
! ATTAAGTATGTTGGGTTAAA+TGG + chr3_2:56569853-56569872 Msa0412790:intron 25.0%
!! TATGAAATTTAGGTTCTGTT+TGG + chr3_2:56570152-56570171 Msa0412790:intron 25.0%
!! TATTGTGATCATATGGTTTT+GGG + chr3_2:56571040-56571059 Msa0412790:three_prime_UTR 25.0%
!!! GGGCATTTATTTTCTTTTAT+GGG - chr3_2:56571091-56571110 None:intergenic 25.0%
!!! TGGGCATTTATTTTCTTTTA+TGG - chr3_2:56571092-56571111 None:intergenic 25.0%
!! TTTTTCGACGCTGAATAAAT+CGG - chr3_2:56561262-56561281 None:intergenic 30.0%
AGTAGTCGTCAATTATTCTT+TGG - chr3_2:56561349-56561368 None:intergenic 30.0%
AGTAGTTATCACTACTTGAA+AGG - chr3_2:56561453-56561472 None:intergenic 30.0%
!!! CGGTGATATACCTTTTTTAT+TGG - chr3_2:56561497-56561516 None:intergenic 30.0%
!!! GTTTTTTATCAAGTGTCCTT+AGG - chr3_2:56561767-56561786 None:intergenic 30.0%
! GCATCATGCCTTTTATTAAT+GGG - chr3_2:56561929-56561948 None:intergenic 30.0%
! TGCATCATGCCTTTTATTAA+TGG - chr3_2:56561930-56561949 None:intergenic 30.0%
! TTAATAAAAGGCATGATGCA+TGG + chr3_2:56561930-56561949 Msa0412790:intron 30.0%
ACATAATAGATTAGAAGAGG+TGG - chr3_2:56562033-56562052 None:intergenic 30.0%
TAAATAGTTGTCAAAAAGGG+TGG - chr3_2:56562191-56562210 None:intergenic 30.0%
GTTAATCGTATGTGAATTTG+TGG - chr3_2:56562354-56562373 None:intergenic 30.0%
!! AGAGTGTTGTGAAAATTCAA+TGG - chr3_2:56563069-56563088 None:intergenic 30.0%
CGTATCCTAGAAAAAAATGA+AGG - chr3_2:56563103-56563122 None:intergenic 30.0%
ATGATGAAAGAGAAGTAGTT+TGG - chr3_2:56563478-56563497 None:intergenic 30.0%
TTATAGTCCAAGTTGTAATG+GGG - chr3_2:56563565-56563584 None:intergenic 30.0%
CTTTATAGTCCAAGTTGTAA+TGG - chr3_2:56563567-56563586 None:intergenic 30.0%
TTGGTAGAGAAAGTGATATA+AGG - chr3_2:56563635-56563654 None:intergenic 30.0%
GAATGGTCGTTTATATTTGA+TGG - chr3_2:56563695-56563714 None:intergenic 30.0%
GACAAAGAAAGAACAAAACA+TGG - chr3_2:56563755-56563774 None:intergenic 30.0%
AAACTAAGAAGTAAGAGTGA+TGG - chr3_2:56563795-56563814 None:intergenic 30.0%
!! ATCATCACTTTTCTTGACTT+TGG + chr3_2:56563962-56563981 Msa0412790:intron 30.0%
!! GGATTGTGTTTTTATGTCTT+AGG + chr3_2:56563983-56564002 Msa0412790:intron 30.0%
!!! TCTTAGGCTAGTTTTTGTTT+TGG + chr3_2:56563999-56564018 Msa0412790:intron 30.0%
TTCAAACATCTACATCTACT+GGG - chr3_2:56564120-56564139 None:intergenic 30.0%
TTTCAAACATCTACATCTAC+TGG - chr3_2:56564121-56564140 None:intergenic 30.0%
!! GAAGAGTATTGCAATTCATA+TGG + chr3_2:56564166-56564185 Msa0412790:intron 30.0%
ATTATGCTGCTCAAGTAATT+AGG - chr3_2:56564284-56564303 None:intergenic 30.0%
GAACAAGTTTCTTATTACCA+TGG - chr3_2:56564308-56564327 None:intergenic 30.0%
ACGTCTTCAATTAGAAATGT+CGG + chr3_2:56564564-56564583 Msa0412790:intron 30.0%
TCTATAATTATTACCGGTGT+CGG + chr3_2:56564685-56564704 Msa0412790:intron 30.0%
ATGTTAGTGTCTATGAGAAA+TGG - chr3_2:56564732-56564751 None:intergenic 30.0%
ATATGCAAATCATCTCAAAC+AGG - chr3_2:56564788-56564807 None:intergenic 30.0%
GCCTATTATCAATAAAGACT+TGG + chr3_2:56564946-56564965 Msa0412790:CDS 30.0%
CCAGAAATTTGCAAAACTAA+GGG - chr3_2:56565147-56565166 None:intergenic 30.0%
ACCAGAAATTTGCAAAACTA+AGG - chr3_2:56565148-56565167 None:intergenic 30.0%
ACTTTATATTCTCAGTGGAT+TGG + chr3_2:56565241-56565260 Msa0412790:intron 30.0%
GTGTATTGAAAACCAACAAT+TGG + chr3_2:56565271-56565290 Msa0412790:CDS 30.0%
TGACATTTCATAGGTTTAAG+AGG - chr3_2:56565392-56565411 None:intergenic 30.0%
CAAGATCAATGACATTTCAT+AGG - chr3_2:56565401-56565420 None:intergenic 30.0%
! TTGAGCATTTTACATGTTCT+CGG + chr3_2:56565418-56565437 Msa0412790:intron 30.0%
AATGAATGTCATAATGAGGA+GGG - chr3_2:56565470-56565489 None:intergenic 30.0%
TAATGAATGTCATAATGAGG+AGG - chr3_2:56565471-56565490 None:intergenic 30.0%
TTATGACATTCATTATTGGC+TGG + chr3_2:56565476-56565495 Msa0412790:CDS 30.0%
! TATGACATTCATTATTGGCT+GGG + chr3_2:56565477-56565496 Msa0412790:CDS 30.0%
! AAGCCTAAAAACTTTTCATG+CGG - chr3_2:56565583-56565602 None:intergenic 30.0%
GTTCAATATAGGGAAATTCA+AGG + chr3_2:56565730-56565749 Msa0412790:CDS 30.0%
TTAAAAATCTTCCTCTTCAG+TGG + chr3_2:56566086-56566105 Msa0412790:CDS 30.0%
TATATCAAGGAGAATAAGCA+TGG + chr3_2:56566158-56566177 Msa0412790:CDS 30.0%
GTATATATTCCAACCTATTG+TGG - chr3_2:56566201-56566220 None:intergenic 30.0%
TACAAGCACTAAAAAAGGAA+GGG - chr3_2:56566234-56566253 None:intergenic 30.0%
ATACAAGCACTAAAAAAGGA+AGG - chr3_2:56566235-56566254 None:intergenic 30.0%
ACAGATACAAGCACTAAAAA+AGG - chr3_2:56566239-56566258 None:intergenic 30.0%
! CTCCAATTGTAAAGCTATTT+TGG + chr3_2:56566414-56566433 Msa0412790:CDS 30.0%
! CACCAAAATAGCTTTACAAT+TGG - chr3_2:56566419-56566438 None:intergenic 30.0%
!!! ATTGTAAAGCTATTTTGGTG+AGG + chr3_2:56566419-56566438 Msa0412790:intron 30.0%
CTGAAGTAAGAGAAATAAAG+TGG - chr3_2:56566506-56566525 None:intergenic 30.0%
! AGTAAGAGTTTCTTGTTTCT+CGG + chr3_2:56566745-56566764 Msa0412790:intron 30.0%
AAAATCCTAGAAAATGGAGA+AGG - chr3_2:56566965-56566984 None:intergenic 30.0%
TCTGACAAAATCCTAGAAAA+TGG - chr3_2:56566971-56566990 None:intergenic 30.0%
! TAGGATTTTGTCAGAAATGA+AGG + chr3_2:56566976-56566995 Msa0412790:intron 30.0%
! CATACGACATTTTTATCAGA+AGG + chr3_2:56567015-56567034 Msa0412790:CDS 30.0%
! GACATTTTTATCAGAAGGAT+TGG + chr3_2:56567020-56567039 Msa0412790:CDS 30.0%
ATAACCCTGATGTTTGAATA+TGG - chr3_2:56567224-56567243 None:intergenic 30.0%
TGAAATAGTCAGTTAACAGT+TGG - chr3_2:56567376-56567395 None:intergenic 30.0%
TAACTGACTATTTCAACTTC+AGG + chr3_2:56567381-56567400 Msa0412790:intron 30.0%
AGACAAAACCATAGAAAATG+AGG - chr3_2:56567949-56567968 None:intergenic 30.0%
!! ATCAACCATAGTATTGATGT+GGG - chr3_2:56567999-56568018 None:intergenic 30.0%
!! AATCAACCATAGTATTGATG+TGG - chr3_2:56568000-56568019 None:intergenic 30.0%
! AGTTTTTCTCAATACTCCAA+AGG + chr3_2:56568311-56568330 Msa0412790:CDS 30.0%
CTCACTATGATCTCATTATA+AGG + chr3_2:56568356-56568375 Msa0412790:intron 30.0%
AGTTTGCAGAATATAGCAAT+AGG - chr3_2:56568691-56568710 None:intergenic 30.0%
! GAATGAACCTGATATTTTCT+GGG + chr3_2:56568931-56568950 Msa0412790:CDS 30.0%
! ACTTGGTTTAGAATTATCGT+CGG + chr3_2:56569087-56569106 Msa0412790:intron 30.0%
TGTTTCTCACGCAAATTTAT+TGG + chr3_2:56569137-56569156 Msa0412790:intron 30.0%
TGAATTCGGTTAATTCAATG+TGG + chr3_2:56569232-56569251 Msa0412790:intron 30.0%
TCACCTGAAATATTACATCA+TGG - chr3_2:56569258-56569277 None:intergenic 30.0%
GCCAAAGAGAGATTTATATT+TGG + chr3_2:56569338-56569357 Msa0412790:CDS 30.0%
CCCAAATATAAATCTCTCTT+TGG - chr3_2:56569342-56569361 None:intergenic 30.0%
AGAGAGATTTATATTTGGGT+TGG + chr3_2:56569343-56569362 Msa0412790:CDS 30.0%
ATGCAAGTTTCATTGTAGTA+TGG + chr3_2:56569548-56569567 Msa0412790:intron 30.0%
CTGCTTATAACAATTTCCAT+GGG - chr3_2:56569609-56569628 None:intergenic 30.0%
TCTGCTTATAACAATTTCCA+TGG - chr3_2:56569610-56569629 None:intergenic 30.0%
AGTCCCTATTTATGTTGTAA+TGG + chr3_2:56569673-56569692 Msa0412790:CDS 30.0%
CCTTCCATTACAACATAAAT+AGG - chr3_2:56569680-56569699 None:intergenic 30.0%
! CCTATTTATGTTGTAATGGA+AGG + chr3_2:56569677-56569696 Msa0412790:CDS 30.0%
GAAAAGAAACGAGTGAAAAA+TGG - chr3_2:56569713-56569732 None:intergenic 30.0%
CTTCTTAAAGTCAAGAATCA+TGG - chr3_2:56569807-56569826 None:intergenic 30.0%
ACCCAACATACTTAATAAGA+TGG - chr3_2:56569849-56569868 None:intergenic 30.0%
GAAATAAGCTAAGCTTATGA+TGG - chr3_2:56570260-56570279 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+CGG - chr3_2:56570293-56570312 None:intergenic 30.0%
! TTTTATCTAAACAAGGACTC+TGG + chr3_2:56570409-56570428 Msa0412790:intron 30.0%
CATCAATTTAACCAAAAGAG+AGG + chr3_2:56570660-56570679 Msa0412790:CDS 30.0%
! TGCTAGATTTCTTTTAGTCA+AGG - chr3_2:56570691-56570710 None:intergenic 30.0%
! AATTTTTCATGGAACTCTTC+AGG - chr3_2:56570795-56570814 None:intergenic 30.0%
GAAGAGTTCCATGAAAAATT+TGG + chr3_2:56570795-56570814 Msa0412790:CDS 30.0%
! TTGGCATTCCAAATTTTTCA+TGG - chr3_2:56570806-56570825 None:intergenic 30.0%
! AGTTTGTAGAAAGCAGATTT+TGG - chr3_2:56570825-56570844 None:intergenic 30.0%
!! TGTCACTTGATCTATTTTAG+AGG + chr3_2:56570874-56570893 Msa0412790:CDS 30.0%
!! ACTTGATCTATTTTAGAGGA+TGG + chr3_2:56570878-56570897 Msa0412790:exon 30.0%
! ACATATTTGCATGTGTTTTC+TGG + chr3_2:56570911-56570930 Msa0412790:three_prime_UTR 30.0%
! CTATTGTGATCATATGGTTT+TGG + chr3_2:56571039-56571058 Msa0412790:three_prime_UTR 30.0%
!! ATTGTGATCATATGGTTTTG+GGG + chr3_2:56571041-56571060 Msa0412790:three_prime_UTR 30.0%
AGTAGGCTTCGATATCAAAA+GGG - chr3_2:56561202-56561221 None:intergenic 35.0%
AAGTAGGCTTCGATATCAAA+AGG - chr3_2:56561203-56561222 None:intergenic 35.0%
!! AACATCACGTTTTTGGAAGT+AGG - chr3_2:56561219-56561238 None:intergenic 35.0%
! TGTCTTCAACATCACGTTTT+TGG - chr3_2:56561226-56561245 None:intergenic 35.0%
! TCAGCGTCGAAAAAAATTAG+AGG + chr3_2:56561268-56561287 Msa0412790:CDS 35.0%
CGTCGAAAAAAATTAGAGGA+AGG + chr3_2:56561272-56561291 Msa0412790:CDS 35.0%
TTTCAATAGAGATCATGCAG+TGG + chr3_2:56561319-56561338 Msa0412790:CDS 35.0%
GTTGATGCAGCCAATAAAAA+AGG + chr3_2:56561484-56561503 Msa0412790:CDS 35.0%
! GTTGTGGTACATTTTGCTAA+CGG - chr3_2:56561517-56561536 None:intergenic 35.0%
ACAATGCGAATGTTAGCATA+TGG + chr3_2:56561535-56561554 Msa0412790:intron 35.0%
AAATGCTAACAAATGCCCTA+AGG + chr3_2:56561748-56561767 Msa0412790:intron 35.0%
TGCCCTTAAGGCAATATTTA+AGG - chr3_2:56561893-56561912 None:intergenic 35.0%
! AAATATTGCCTTAAGGGCAT+TGG + chr3_2:56561894-56561913 Msa0412790:intron 35.0%
ATTTATCAAAGTCAAGGCCA+TGG - chr3_2:56561957-56561976 None:intergenic 35.0%
! TTTTGTTGGTCATTCGTTAG+TGG - chr3_2:56562279-56562298 None:intergenic 35.0%
TGATGAAAGTAACAAGAGAG+GGG - chr3_2:56562969-56562988 None:intergenic 35.0%
GTGATGAAAGTAACAAGAGA+GGG - chr3_2:56562970-56562989 None:intergenic 35.0%
!!! TTTTTCTAGGATACGTCTCT+AGG + chr3_2:56563108-56563127 Msa0412790:intron 35.0%
TCTCTAATCTATGAGTGTCT+TGG + chr3_2:56563367-56563386 Msa0412790:intron 35.0%
TATGGTCAATTGGTCATAGA+TGG - chr3_2:56563408-56563427 None:intergenic 35.0%
ACCATTCTTGCTTTACTATG+TGG + chr3_2:56563708-56563727 Msa0412790:intron 35.0%
CAGATAATCAGATCATACCT+TGG - chr3_2:56563845-56563864 None:intergenic 35.0%
CAAGGTATGATCTGATTATC+TGG + chr3_2:56563843-56563862 Msa0412790:intron 35.0%
TGAGTCAACACTAACAGTTT+AGG + chr3_2:56564059-56564078 Msa0412790:intron 35.0%
! TAACAGTTTAGGTTTCTTGC+TGG + chr3_2:56564070-56564089 Msa0412790:intron 35.0%
GGAAAGTTATCAAGCTGAAT+AGG + chr3_2:56564187-56564206 Msa0412790:intron 35.0%
GATAAAACACTGTCGTCAAT+TGG + chr3_2:56564341-56564360 Msa0412790:intron 35.0%
GTAATCATATGTGTCAGTGT+CGG - chr3_2:56564650-56564669 None:intergenic 35.0%
ATCATCTCAAACAGGTAAGA+TGG - chr3_2:56564780-56564799 None:intergenic 35.0%
AATCCAGGATTAAGATATGC+AGG - chr3_2:56564869-56564888 None:intergenic 35.0%
ACTTGATTATTCTGCAATCC+AGG - chr3_2:56564884-56564903 None:intergenic 35.0%
!! AATCAAGTGTTGCTTCAAGT+TGG + chr3_2:56564896-56564915 Msa0412790:CDS 35.0%
!! GATAATAGGCATTGGCTTTA+TGG - chr3_2:56564936-56564955 None:intergenic 35.0%
TTAGGCTGACAGAAATTGTA+AGG - chr3_2:56565033-56565052 None:intergenic 35.0%
AGCCTAATTCAACTTGCATT+AGG + chr3_2:56565046-56565065 Msa0412790:intron 35.0%
! GACCTAATGCAAGTTGAATT+AGG - chr3_2:56565051-56565070 None:intergenic 35.0%
!!! CCCTTAGTTTTGCAAATTTC+TGG + chr3_2:56565144-56565163 Msa0412790:intron 35.0%
GACCTTCGAAAATTCTATAC+CGG + chr3_2:56565311-56565330 Msa0412790:CDS 35.0%
! TTCCGGTATAGAATTTTCGA+AGG - chr3_2:56565316-56565335 None:intergenic 35.0%
ATAGGTTTAAGAGGATCAAC+AGG - chr3_2:56565383-56565402 None:intergenic 35.0%
! TTTTACATGTTCTCGGAAAC+AGG + chr3_2:56565425-56565444 Msa0412790:intron 35.0%
TTGGTTTACTATCTTGCTTG+CGG + chr3_2:56565530-56565549 Msa0412790:intron 35.0%
! TCTCCGCATGAAAAGTTTTT+AGG + chr3_2:56565577-56565596 Msa0412790:intron 35.0%
CCTTCAATGGGTATTAAACA+AGG - chr3_2:56565790-56565809 None:intergenic 35.0%
! CCTTGTTTAATACCCATTGA+AGG + chr3_2:56565787-56565806 Msa0412790:CDS 35.0%
GAAGTAAACACTCCTTCAAT+GGG - chr3_2:56565802-56565821 None:intergenic 35.0%
TGAAGTAAACACTCCTTCAA+TGG - chr3_2:56565803-56565822 None:intergenic 35.0%
GAGTGTTTACTTCAAAGCAA+GGG + chr3_2:56565809-56565828 Msa0412790:CDS 35.0%
TCAAAGCAAGGGAATTTGAA+CGG + chr3_2:56565820-56565839 Msa0412790:CDS 35.0%
! TTTGTTAGGTTCCTTTTCTG+AGG + chr3_2:56566021-56566040 Msa0412790:intron 35.0%
TTCAATGATGACCTCAGAAA+AGG - chr3_2:56566035-56566054 None:intergenic 35.0%
GGAGGTTGTTCAATATATCA+AGG + chr3_2:56566145-56566164 Msa0412790:CDS 35.0%
ACAAGCACTAAAAAAGGAAG+GGG - chr3_2:56566233-56566252 None:intergenic 35.0%
! TGCTTGTATCTGTTTTCTGA+GGG + chr3_2:56566246-56566265 Msa0412790:intron 35.0%
GTAGAGGATGGAAAATTTGT+TGG + chr3_2:56566305-56566324 Msa0412790:intron 35.0%
!! TTTGTTGGTGATTCTGATGT+CGG + chr3_2:56566320-56566339 Msa0412790:CDS 35.0%
AAGAGAAATAAAGTGGAGCA+AGG - chr3_2:56566499-56566518 None:intergenic 35.0%
! ACTTTTGTTCCTCGATACTA+AGG + chr3_2:56566531-56566550 Msa0412790:intron 35.0%
CTTGACAGGATAAATCTACA+GGG + chr3_2:56566572-56566591 Msa0412790:intron 35.0%
CTGAATGTATTGCTTCCAAT+TGG - chr3_2:56566608-56566627 None:intergenic 35.0%
TACATTCAGCAAAGAAATGC+TGG + chr3_2:56566619-56566638 Msa0412790:CDS 35.0%
! AAATTTTTGTGTGGATGGGA+AGG + chr3_2:56566678-56566697 Msa0412790:CDS 35.0%
TGTTCTTCTTTCGGTCAATA+AGG - chr3_2:56566708-56566727 None:intergenic 35.0%
TTTGATCGCTGTTCTTCTTT+CGG - chr3_2:56566717-56566736 None:intergenic 35.0%
! AAATGTCGTATGAGTCTTGT+CGG - chr3_2:56567007-56567026 None:intergenic 35.0%
!! GATTGGAAAGTACCAACTTT+AGG + chr3_2:56567037-56567056 Msa0412790:CDS 35.0%
TTAGGTCGCACTTTACTAAT+TGG + chr3_2:56567055-56567074 Msa0412790:CDS 35.0%
TCAGCCATATTCAAACATCA+GGG + chr3_2:56567217-56567236 Msa0412790:intron 35.0%
TATGGTCATAGGACAAGAAA+CGG - chr3_2:56567337-56567356 None:intergenic 35.0%
! GACTATTTCAACTTCAGGTT+TGG + chr3_2:56567386-56567405 Msa0412790:intron 35.0%
GTAGTACAGTATACATTTCC+AGG + chr3_2:56567481-56567500 Msa0412790:CDS 35.0%
CAGTATACATTTCCAGGAAA+TGG + chr3_2:56567487-56567506 Msa0412790:CDS 35.0%
ATACATTTCCAGGAAATGGA+AGG + chr3_2:56567491-56567510 Msa0412790:CDS 35.0%
TACATTTCCAGGAAATGGAA+GGG + chr3_2:56567492-56567511 Msa0412790:CDS 35.0%
! ATGAGACACTGTTTTATGCT+TGG + chr3_2:56567515-56567534 Msa0412790:CDS 35.0%
! AAAGTTTTCTGTCTTCCACT+CGG + chr3_2:56567572-56567591 Msa0412790:intron 35.0%
TTCATCAAAGCTAAGTAGCA+TGG - chr3_2:56567723-56567742 None:intergenic 35.0%
!! AATGAGAGTGTTAGACAGTT+TGG - chr3_2:56567812-56567831 None:intergenic 35.0%
! ACAAGGTTCCTCATTTTCTA+TGG + chr3_2:56567938-56567957 Msa0412790:intron 35.0%
!!! TTTCTATGGTTTTGTCTCAC+AGG + chr3_2:56567952-56567971 Msa0412790:intron 35.0%
!! CATAGTATTGATGTGGGAAA+TGG - chr3_2:56567993-56568012 None:intergenic 35.0%
CATTTCCCACATCAATACTA+TGG + chr3_2:56567991-56568010 Msa0412790:CDS 35.0%
ATCTAGAAGTAGTCCAGTTA+TGG + chr3_2:56568021-56568040 Msa0412790:CDS 35.0%
GAACAGAAACTAACCATAAC+TGG - chr3_2:56568037-56568056 None:intergenic 35.0%
TCATCTTGTCAACAATTGCT+AGG + chr3_2:56568149-56568168 Msa0412790:intron 35.0%
! TTTGCATTACACGTGTTTTC+AGG + chr3_2:56568258-56568277 Msa0412790:intron 35.0%
!! TTTTCAGGCTCAAATTCATG+AGG + chr3_2:56568273-56568292 Msa0412790:intron 35.0%
TTTCAGGCTCAAATTCATGA+GGG + chr3_2:56568274-56568293 Msa0412790:intron 35.0%
! AGTATTGAGAAAAACTGAGC+TGG - chr3_2:56568307-56568326 None:intergenic 35.0%
!! CCTTGAATATGATTAGCCTT+TGG - chr3_2:56568330-56568349 None:intergenic 35.0%
CCAAAGGCTAATCATATTCA+AGG + chr3_2:56568327-56568346 Msa0412790:CDS 35.0%
GTGTATAGAAGAAAACGGTA+CGG + chr3_2:56568464-56568483 Msa0412790:CDS 35.0%
TGAAACTCACAATGAAAACC+TGG + chr3_2:56568491-56568510 Msa0412790:CDS 35.0%
TACAAGTCCAGATAATATGC+AGG + chr3_2:56568536-56568555 Msa0412790:CDS 35.0%
CCATTCTATCAAGAAGAGTA+TGG - chr3_2:56568761-56568780 None:intergenic 35.0%
CCATACTCTTCTTGATAGAA+TGG + chr3_2:56568758-56568777 Msa0412790:CDS 35.0%
TACTCTTCTTGATAGAATGG+TGG + chr3_2:56568761-56568780 Msa0412790:CDS 35.0%
! GGAATGAACCTGATATTTTC+TGG + chr3_2:56568930-56568949 Msa0412790:CDS 35.0%
AGAACATCCCAGAAAATATC+AGG - chr3_2:56568941-56568960 None:intergenic 35.0%
!!! GATATTTTCTGGGATGTTCT+TGG + chr3_2:56568941-56568960 Msa0412790:CDS 35.0%
! CCTTGAATCTCCTTTTCTTT+TGG - chr3_2:56568983-56569002 None:intergenic 35.0%
CCAAAAGAAAAGGAGATTCA+AGG + chr3_2:56568980-56568999 Msa0412790:CDS 35.0%
CTTAAATTCAGGAGACTTCA+AGG + chr3_2:56569162-56569181 Msa0412790:intron 35.0%
TGGCCATGATGTAATATTTC+AGG + chr3_2:56569252-56569271 Msa0412790:intron 35.0%
! CTACAATGTTTTTCTTCCCA+TGG + chr3_2:56569590-56569609 Msa0412790:intron 35.0%
AAGAAACGAGTGAAAAATGG+CGG - chr3_2:56569710-56569729 None:intergenic 35.0%
! TTTTCACTCGTTTCTTTTCG+TGG + chr3_2:56569714-56569733 Msa0412790:CDS 35.0%
! TTTCACTCGTTTCTTTTCGT+GGG + chr3_2:56569715-56569734 Msa0412790:CDS 35.0%
AGAAAGCTTGCAATTCTGAA+AGG + chr3_2:56569908-56569927 Msa0412790:CDS 35.0%
! AATTCTGAAAGGAAACTCCA+GGG + chr3_2:56569919-56569938 Msa0412790:CDS 35.0%
ATAAGCACTTACATGATACG+TGG + chr3_2:56570375-56570394 Msa0412790:intron 35.0%
TGTTTGTTCTGCGGAAAAAA+TGG - chr3_2:56570491-56570510 None:intergenic 35.0%
TAAACTTGCAGTCTCATTTG+AGG - chr3_2:56570551-56570570 None:intergenic 35.0%
TATGCCTAATTTCATCGCAA+TGG - chr3_2:56570765-56570784 None:intergenic 35.0%
!!! GCTTGTTTTGTTTCCATCTA+GGG - chr3_2:56570848-56570867 None:intergenic 35.0%
!!! AGCTTGTTTTGTTTCCATCT+AGG - chr3_2:56570849-56570868 None:intergenic 35.0%
!!! TTGTGATCATATGGTTTTGG+GGG + chr3_2:56571042-56571061 Msa0412790:three_prime_UTR 35.0%
TGCTAACATTCGCATTGTTG+TGG - chr3_2:56561533-56561552 None:intergenic 40.0%
ATGGGTACAGAATAGAGCAA+AGG - chr3_2:56561669-56561688 None:intergenic 40.0%
TTTGCTAACCAATGCCCTTA+AGG - chr3_2:56561905-56561924 None:intergenic 40.0%
TAGGTTTCTGACATGGTAGA+TGG - chr3_2:56562602-56562621 None:intergenic 40.0%
GGTGATGAAAGTAACAAGAG+AGG - chr3_2:56562971-56562990 None:intergenic 40.0%
TCAATAATTCCGATACTCCG+TGG + chr3_2:56563208-56563227 Msa0412790:intron 40.0%
! GAGAGAAAGGTATGGTCAAT+TGG - chr3_2:56563418-56563437 None:intergenic 40.0%
TGAGAACTGAGAGAAAGGTA+TGG - chr3_2:56563426-56563445 None:intergenic 40.0%
AAGTGACAACAGTCACACAA+GGG + chr3_2:56563451-56563470 Msa0412790:intron 40.0%
GCCACATAGTAAAGCAAGAA+TGG - chr3_2:56563712-56563731 None:intergenic 40.0%
GGTTCAACAGAAAACTGAGA+AGG - chr3_2:56563824-56563843 None:intergenic 40.0%
! CTCAGTTTTCTGTTGAACCA+AGG + chr3_2:56563825-56563844 Msa0412790:intron 40.0%
TCTACATCTACTGGGAAAGT+GGG - chr3_2:56564112-56564131 None:intergenic 40.0%
ATCTACATCTACTGGGAAAG+TGG - chr3_2:56564113-56564132 None:intergenic 40.0%
GCTGCTCAAGTAATTAGGAT+AGG - chr3_2:56564279-56564298 None:intergenic 40.0%
! CGTCAATTGGCTTATTTGCA+TGG + chr3_2:56564354-56564373 Msa0412790:intron 40.0%
GGCTTATTTGCATGGAACTA+TGG + chr3_2:56564362-56564381 Msa0412790:intron 40.0%
ATGAGTAGTTTACAGTCGAG+TGG + chr3_2:56564385-56564404 Msa0412790:intron 40.0%
TGTCAGTGTCATGTTAGTGT+CGG + chr3_2:56564515-56564534 Msa0412790:intron 40.0%
CATTGACACATGTTGGACAA+CGG + chr3_2:56564539-56564558 Msa0412790:intron 40.0%
CTTCTGATTGAAGTTGTGTC+CGG + chr3_2:56564604-56564623 Msa0412790:intron 40.0%
TGTCTATGAGAAATGGACAC+CGG - chr3_2:56564725-56564744 None:intergenic 40.0%
TAGCCTGCATATCTTAATCC+TGG + chr3_2:56564863-56564882 Msa0412790:intron 40.0%
!! TTCTCAGTGGATTGGAAGTT+TGG + chr3_2:56565249-56565268 Msa0412790:intron 40.0%
CAGAACTATGTATGCACTTC+CGG - chr3_2:56565333-56565352 None:intergenic 40.0%
!!! TAATGAGGAGGGCCATTTTT+GGG - chr3_2:56565459-56565478 None:intergenic 40.0%
!! ATAATGAGGAGGGCCATTTT+TGG - chr3_2:56565460-56565479 None:intergenic 40.0%
CATGATCTCTAATGGCTGTA+GGG - chr3_2:56565612-56565631 None:intergenic 40.0%
TCATGATCTCTAATGGCTGT+AGG - chr3_2:56565613-56565632 None:intergenic 40.0%
GTGCAGATCATGATCTCTAA+TGG - chr3_2:56565620-56565639 None:intergenic 40.0%
! TCATGATCTGCACTTTTCAC+CGG + chr3_2:56565627-56565646 Msa0412790:intron 40.0%
ACCTGCAAATACATAACTCC+CGG - chr3_2:56565649-56565668 None:intergenic 40.0%
ATCCTGCAGCGTTCAATATA+GGG + chr3_2:56565720-56565739 Msa0412790:CDS 40.0%
! GGAGTGTTTACTTCAAAGCA+AGG + chr3_2:56565808-56565827 Msa0412790:CDS 40.0%
ATTCAGATAACGTGCAGAGA+CGG - chr3_2:56565965-56565984 None:intergenic 40.0%
ACCATTCAAGAAAGAGCCAA+AGG + chr3_2:56566119-56566138 Msa0412790:CDS 40.0%
!! ACCTTTGGCTCTTTCTTGAA+TGG - chr3_2:56566123-56566142 None:intergenic 40.0%
TCAAGAAAGAGCCAAAGGTT+TGG + chr3_2:56566124-56566143 Msa0412790:CDS 40.0%
TTGAACAACCTCCAAACCTT+TGG - chr3_2:56566138-56566157 None:intergenic 40.0%
ATCAAGGAGAATAAGCATGG+TGG + chr3_2:56566161-56566180 Msa0412790:CDS 40.0%
! TAAGCATGGTGGAAAATGTG+AGG + chr3_2:56566172-56566191 Msa0412790:CDS 40.0%
! GTGCTTGTATCTGTTTTCTG+AGG + chr3_2:56566245-56566264 Msa0412790:intron 40.0%
!! GGAGAGTTCTGGAGTTTATT+TGG + chr3_2:56566341-56566360 Msa0412790:CDS 40.0%
!! GAGTTCTGGAGTTTATTTGG+TGG + chr3_2:56566344-56566363 Msa0412790:CDS 40.0%
! TAGCTTTACAATTGGAGCCA+CGG - chr3_2:56566411-56566430 None:intergenic 40.0%
CCTGTAGATTTATCCTGTCA+AGG - chr3_2:56566574-56566593 None:intergenic 40.0%
CCTTGACAGGATAAATCTAC+AGG + chr3_2:56566571-56566590 Msa0412790:intron 40.0%
CAGGGAAAACTTTGTCCAAT+TGG + chr3_2:56566590-56566609 Msa0412790:CDS 40.0%
! TTTCTTGTTTCTCGGTCTGA+AGG + chr3_2:56566753-56566772 Msa0412790:intron 40.0%
! TTCTTGTTTCTCGGTCTGAA+GGG + chr3_2:56566754-56566773 Msa0412790:intron 40.0%
AAATCCCTGAATGCAATGCT+TGG - chr3_2:56566928-56566947 None:intergenic 40.0%
! TGCTACCTTCTCCATTTTCT+AGG + chr3_2:56566957-56566976 Msa0412790:intron 40.0%
AGTAAAGTGCGACCTAAAGT+TGG - chr3_2:56567052-56567071 None:intergenic 40.0%
! AGCCTAGTCTCAACTGTTTT+AGG - chr3_2:56567081-56567100 None:intergenic 40.0%
GTTTGAATATGGCTGAGACA+GGG - chr3_2:56567213-56567232 None:intergenic 40.0%
TGTTTGAATATGGCTGAGAC+AGG - chr3_2:56567214-56567233 None:intergenic 40.0%
CTCAGCCATATTCAAACATC+AGG + chr3_2:56567216-56567235 Msa0412790:intron 40.0%
GAAAGAACTTCCTGATGAAG+TGG + chr3_2:56567249-56567268 Msa0412790:CDS 40.0%
GCATGGGAAAATATGGTCAT+AGG - chr3_2:56567348-56567367 None:intergenic 40.0%
TTAACAGTTGGAACAGGCAT+GGG - chr3_2:56567364-56567383 None:intergenic 40.0%
AGTCAGTTAACAGTTGGAAC+AGG - chr3_2:56567370-56567389 None:intergenic 40.0%
! ACACTGTTTTATGCTTGGCT+TGG + chr3_2:56567520-56567539 Msa0412790:CDS 40.0%
TAGCTGAGATTGAGGTTATC+AGG - chr3_2:56567875-56567894 None:intergenic 40.0%
TAACCTCAATCTCAGCTAGT+TGG + chr3_2:56567877-56567896 Msa0412790:intron 40.0%
AATCCAACTAGCTGAGATTG+AGG - chr3_2:56567883-56567902 None:intergenic 40.0%
CAATCTCAGCTAGTTGGATT+AGG + chr3_2:56567883-56567902 Msa0412790:intron 40.0%
!! AGTATTGATGTGGGAAATGG+CGG - chr3_2:56567990-56568009 None:intergenic 40.0%
TATAGAAGAAAACGGTACGG+TGG + chr3_2:56568467-56568486 Msa0412790:CDS 40.0%
TGAACCATACTTGATCGACT+TGG - chr3_2:56568566-56568585 None:intergenic 40.0%
CTGAAGCAGCTATGTATACA+TGG + chr3_2:56568709-56568728 Msa0412790:CDS 40.0%
GCAGCTATGTATACATGGAT+TGG + chr3_2:56568714-56568733 Msa0412790:CDS 40.0%
! AAGAAGAGTATGGTCTCTTG+CGG - chr3_2:56568751-56568770 None:intergenic 40.0%
!!! ATTTTCTGGGATGTTCTTGG+TGG + chr3_2:56568944-56568963 Msa0412790:CDS 40.0%
GGCGGAATATCCAAAAGAAA+AGG + chr3_2:56568970-56568989 Msa0412790:CDS 40.0%
ATTATCGTCGGTGAAATGAC+AGG + chr3_2:56569099-56569118 Msa0412790:intron 40.0%
TTATCGTCGGTGAAATGACA+GGG + chr3_2:56569100-56569119 Msa0412790:intron 40.0%
GAAATGACAGGGAAAACTGA+TGG + chr3_2:56569111-56569130 Msa0412790:intron 40.0%
AAACAAGAAGCTCTCAACCT+CGG + chr3_2:56569388-56569407 Msa0412790:CDS 40.0%
GAACTAGCAAACTTGATCGA+CGG - chr3_2:56569444-56569463 None:intergenic 40.0%
GAAATGGATGTCCTTGTTGA+AGG + chr3_2:56569638-56569657 Msa0412790:CDS 40.0%
ATGGTACTGTTGCAGATTCT+TGG + chr3_2:56569872-56569891 Msa0412790:intron 40.0%
! CAATTCTGAAAGGAAACTCC+AGG + chr3_2:56569918-56569937 Msa0412790:CDS 40.0%
AGCGGTTCTATCATTTCCAA+TGG + chr3_2:56569965-56569984 Msa0412790:CDS 40.0%
AGATCCTTCAAAGAGCTTCT+TGG - chr3_2:56570083-56570102 None:intergenic 40.0%
TTACCAGCACTGTTATTAGC+AGG - chr3_2:56570106-56570125 None:intergenic 40.0%
TAAGCACTTGTGAGACTGTT+TGG + chr3_2:56570204-56570223 Msa0412790:intron 40.0%
CAGTGGAATTGTTTGTTCTG+CGG - chr3_2:56570500-56570519 None:intergenic 40.0%
CAGTTCTGTTGCTGAAGAAT+CGG - chr3_2:56570524-56570543 None:intergenic 40.0%
GTTAAATTGATGCCTGTCAC+TGG - chr3_2:56570652-56570671 None:intergenic 40.0%
!!! TCAAGGAAGTACCTCTCTTT+TGG - chr3_2:56570674-56570693 None:intergenic 40.0%
CTTTCTACAAACTCCCTAGA+TGG + chr3_2:56570832-56570851 Msa0412790:CDS 40.0%
AACATTGCATCGTCGTACGT+AGG - chr3_2:56561383-56561402 None:intergenic 45.0%
ACGATGCAATGTTTCGTCGT+CGG + chr3_2:56561390-56561409 Msa0412790:CDS 45.0%
GCATCGTCGTACGATTTATC+CGG - chr3_2:56561418-56561437 None:intergenic 45.0%
ATTGGCTGCATCAACTCGTT+GGG - chr3_2:56561479-56561498 None:intergenic 45.0%
! TATTGGCTGCATCAACTCGT+TGG - chr3_2:56561480-56561499 None:intergenic 45.0%
GCGAATGTTAGCATATGGTG+TGG + chr3_2:56561540-56561559 Msa0412790:intron 45.0%
GGCTTCATAGGTTTCTGACA+TGG - chr3_2:56562609-56562628 None:intergenic 45.0%
TGTCAGAAACCTATGAAGCC+CGG + chr3_2:56562609-56562628 Msa0412790:intron 45.0%
GATACGGGTACGATACGATA+CGG + chr3_2:56562643-56562662 Msa0412790:intron 45.0%
ATACGGGTACGATACGATAC+GGG + chr3_2:56562644-56562663 Msa0412790:intron 45.0%
ATTCCGATACTCCGTGGATA+CGG + chr3_2:56563214-56563233 Msa0412790:intron 45.0%
ATACCGTATCCACGGAGTAT+CGG - chr3_2:56563220-56563239 None:intergenic 45.0%
TACTCAGGATACCGTATCCA+CGG - chr3_2:56563228-56563247 None:intergenic 45.0%
TATCCGATACGTATCCGACA+CGG + chr3_2:56563263-56563282 Msa0412790:intron 45.0%
!! CTGTTTCTGACTATGAAGCC+CGG - chr3_2:56563311-56563330 None:intergenic 45.0%
GTCAGTGAGAACTGAGAGAA+AGG - chr3_2:56563431-56563450 None:intergenic 45.0%
CAAGTGACAACAGTCACACA+AGG + chr3_2:56563450-56563469 Msa0412790:intron 45.0%
TTGTGGACCCCATTACAACT+TGG + chr3_2:56563555-56563574 Msa0412790:intron 45.0%
TTCTGCGAATTCTTAGGCCT+AGG + chr3_2:56564218-56564237 Msa0412790:intron 45.0%
ACTTGAGCAGCATAATGCCA+TGG + chr3_2:56564288-56564307 Msa0412790:intron 45.0%
! ACTGATTCCAATCCGTAGCA+CGG + chr3_2:56564423-56564442 Msa0412790:intron 45.0%
TGTCGGACATTGACACATGT+TGG + chr3_2:56564532-56564551 Msa0412790:intron 45.0%
!! AAATGTCGGTGCTACAGAGA+CGG + chr3_2:56564578-56564597 Msa0412790:intron 45.0%
!! CAAGTGTTGCTTCAAGTTGG+TGG + chr3_2:56564899-56564918 Msa0412790:CDS 45.0%
GATCCTGCATTTCAAACTGC+AGG + chr3_2:56564968-56564987 Msa0412790:CDS 45.0%
TACATGTTCTCGGAAACAGG+CGG + chr3_2:56565428-56565447 Msa0412790:intron 45.0%
! CAGGCGGTTTTTCCCAAAAA+TGG + chr3_2:56565444-56565463 Msa0412790:intron 45.0%
GCTGGGAAATGACACAAAGA+AGG + chr3_2:56565494-56565513 Msa0412790:CDS 45.0%
! CATGATCTGCACTTTTCACC+GGG + chr3_2:56565628-56565647 Msa0412790:intron 45.0%
ACCGGGAGTTATGTATTTGC+AGG + chr3_2:56565645-56565664 Msa0412790:intron 45.0%
GGGAGTTATGTATTTGCAGG+TGG + chr3_2:56565648-56565667 Msa0412790:intron 45.0%
! TTTGCAGGTGGATTCAACCT+TGG + chr3_2:56565660-56565679 Msa0412790:intron 45.0%
TTCAACCTTGGCATCAGACA+AGG + chr3_2:56565672-56565691 Msa0412790:CDS 45.0%
! ATCAGACAAGGCACTTGAGT+TGG + chr3_2:56565684-56565703 Msa0412790:CDS 45.0%
GATCCTGCAGCGTTCAATAT+AGG + chr3_2:56565719-56565738 Msa0412790:CDS 45.0%
TTCCCTATATTGAACGCTGC+AGG - chr3_2:56565725-56565744 None:intergenic 45.0%
AGTCAGCCTGTACACTTGTA+AGG + chr3_2:56565852-56565871 Msa0412790:CDS 45.0%
GTCAGCCTGTACACTTGTAA+GGG + chr3_2:56565853-56565872 Msa0412790:CDS 45.0%
AGTCTCCCTTACAAGTGTAC+AGG - chr3_2:56565861-56565880 None:intergenic 45.0%
CTATGTTGTCCACGTGAAAG+AGG + chr3_2:56565879-56565898 Msa0412790:CDS 45.0%
TTCAGATAACGTGCAGAGAC+GGG - chr3_2:56565964-56565983 None:intergenic 45.0%
TAGAGTTGCATCCACTGAAG+AGG - chr3_2:56566100-56566119 None:intergenic 45.0%
AGAAAGAGCCAAAGGTTTGG+AGG + chr3_2:56566127-56566146 Msa0412790:CDS 45.0%
AAATGTGAGGTGGCCACAAT+AGG + chr3_2:56566185-56566204 Msa0412790:CDS 45.0%
ATTCTGATGTCGGAGAGTTC+TGG + chr3_2:56566330-56566349 Msa0412790:CDS 45.0%
TGTTCCTCGATACTAAGGAG+CGG + chr3_2:56566536-56566555 Msa0412790:intron 45.0%
! GTTGTTGTCACTTCCTTGAC+AGG + chr3_2:56566558-56566577 Msa0412790:intron 45.0%
GGCCTAAAACAGTTGAGACT+AGG + chr3_2:56567076-56567095 Msa0412790:CDS 45.0%
GAGACTAGGCTTTACGAAGA+AGG + chr3_2:56567090-56567109 Msa0412790:CDS 45.0%
CGAAGAAGGACGAGAAAAAG+TGG + chr3_2:56567104-56567123 Msa0412790:CDS 45.0%
TCATAGGACAAGAAACGGCT+AGG - chr3_2:56567332-56567351 None:intergenic 45.0%
GGAACAGGCATGGGAAAATA+TGG - chr3_2:56567355-56567374 None:intergenic 45.0%
GTTAACAGTTGGAACAGGCA+TGG - chr3_2:56567365-56567384 None:intergenic 45.0%
GTGGTCGGTAACTGAAAGAA+GGG - chr3_2:56567434-56567453 None:intergenic 45.0%
TGTGGTCGGTAACTGAAAGA+AGG - chr3_2:56567435-56567454 None:intergenic 45.0%
ACTGTAAAGTCTCGTGTGGT+CGG - chr3_2:56567449-56567468 None:intergenic 45.0%
GCTTGGCAGTAGATGTGTAA+TGG + chr3_2:56567537-56567556 Msa0412790:CDS 45.0%
CAGGTAAAACATCTACCGAG+TGG - chr3_2:56567590-56567609 None:intergenic 45.0%
!!! CTATGGTTTTGTCTCACAGG+AGG + chr3_2:56567955-56567974 Msa0412790:intron 45.0%
TTTAAGGGGGGAAACAGTTC+AGG + chr3_2:56568432-56568451 Msa0412790:intron 45.0%
!! GTAGCACTGTTTCGAGTTCA+AGG + chr3_2:56568513-56568532 Msa0412790:CDS 45.0%
TGGATGGCCTGCATATTATC+TGG - chr3_2:56568546-56568565 None:intergenic 45.0%
!! CCATACTTGATCGACTTGGA+TGG - chr3_2:56568562-56568581 None:intergenic 45.0%
CCATCCAAGTCGATCAAGTA+TGG + chr3_2:56568559-56568578 Msa0412790:intron 45.0%
TATGGTCTCTTGCGGAAGAA+AGG - chr3_2:56568743-56568762 None:intergenic 45.0%
ACAGATACAGGTAGCTGTGT+CGG - chr3_2:56568902-56568921 None:intergenic 45.0%
ACAGCTACCTGTATCTGTGA+GGG + chr3_2:56568904-56568923 Msa0412790:CDS 45.0%
TACCTGTATCTGTGAGGGAA+GGG + chr3_2:56568909-56568928 Msa0412790:CDS 45.0%
CTAGCGATAAGCCTTCAACA+AGG - chr3_2:56569652-56569671 None:intergenic 45.0%
!! AACCGCTTTTGTGACCGTTA+GGG - chr3_2:56569952-56569971 None:intergenic 45.0%
GAGGTGAACTACTTCTTCGA+CGG - chr3_2:56569991-56570010 None:intergenic 45.0%
GAAGTAGTTCACCTCTACCT+AGG + chr3_2:56569996-56570015 Msa0412790:CDS 45.0%
GCTCAGACTATAGGCAATCA+GGG + chr3_2:56570026-56570045 Msa0412790:CDS 45.0%
!! TTTTTCTAGCCCTACTCCAG+CGG + chr3_2:56570057-56570076 Msa0412790:CDS 45.0%
TCTCCTGCTAATAACAGTGC+TGG + chr3_2:56570100-56570119 Msa0412790:CDS 45.0%
! ACTCTGGAGAGTTCGCTAAT+TGG + chr3_2:56570425-56570444 Msa0412790:intron 45.0%
TTGATGCCTGTCACTGGATT+CGG - chr3_2:56570646-56570665 None:intergenic 45.0%
GGCTCCATTGCGATGAAATT+AGG + chr3_2:56570758-56570777 Msa0412790:intron 45.0%
GCATGCATAATACACTCACG+AGG - chr3_2:56570965-56570984 None:intergenic 45.0%
!!! TAAATAAACATATATTTTAT+TGG - chr3_2:56561623-56561642 None:intergenic 5.0%
!!! TCTTTTTATTTTATTTTTAT+GGG - chr3_2:56561687-56561706 None:intergenic 5.0%
!!! ATCTTTTTATTTTATTTTTA+TGG - chr3_2:56561688-56561707 None:intergenic 5.0%
!! TTAAAAATAAAAATAGTTTA+GGG - chr3_2:56562077-56562096 None:intergenic 5.0%
!! TTTAAAAATAAAAATAGTTT+AGG - chr3_2:56562078-56562097 None:intergenic 5.0%
!! AAATTTACTATTTATATATA+TGG - chr3_2:56562102-56562121 None:intergenic 5.0%
!!! ATATATAAATAGTAAATTTT+AGG + chr3_2:56562103-56562122 Msa0412790:intron 5.0%
!!! ATTTAAAACATATATTTTAT+CGG - chr3_2:56563183-56563202 None:intergenic 5.0%
!! TATATATCATATTATAAAAT+AGG - chr3_2:56568071-56568090 None:intergenic 5.0%
!!! TTAAAAAATATCTTTTTTTA+AGG + chr3_2:56568416-56568435 Msa0412790:intron 5.0%
!!! TAAAAAATATCTTTTTTTAA+GGG + chr3_2:56568417-56568436 Msa0412790:intron 5.0%
ATCGTCGTACGTAGGCTCAT+TGG - chr3_2:56561375-56561394 None:intergenic 50.0%
CAATGTTTCGTCGTCGGTAC+CGG + chr3_2:56561396-56561415 Msa0412790:CDS 50.0%
TCGTACGACGATGCAATCGT+TGG + chr3_2:56561424-56561443 Msa0412790:CDS 50.0%
ATATGGTGTGGCAGCAGATG+CGG + chr3_2:56561552-56561571 Msa0412790:intron 50.0%
AAGGCATGATGCATGGTCCA+TGG + chr3_2:56561937-56561956 Msa0412790:intron 50.0%
ACTACGTATCCGGGCTTCAT+AGG - chr3_2:56562621-56562640 None:intergenic 50.0%
ATGAAGCCCGGATACGTAGT+AGG + chr3_2:56562621-56562640 Msa0412790:intron 50.0%
CCGTATCCTACTACGTATCC+GGG - chr3_2:56562630-56562649 None:intergenic 50.0%
CCCGGATACGTAGTAGGATA+CGG + chr3_2:56562627-56562646 Msa0412790:intron 50.0%
CCCGTATCCTACTACGTATC+CGG - chr3_2:56562631-56562650 None:intergenic 50.0%
CCGGATACGTAGTAGGATAC+GGG + chr3_2:56562628-56562647 Msa0412790:intron 50.0%
TACGATACGATACGGGTACG+CGG + chr3_2:56562651-56562670 Msa0412790:intron 50.0%
TACGGTATCCTGAGTATCCG+CGG + chr3_2:56563232-56563251 Msa0412790:intron 50.0%
TATCGGATACCGATACTCCG+CGG - chr3_2:56563252-56563271 None:intergenic 50.0%
ATCCGATACGTATCCGACAC+GGG + chr3_2:56563264-56563283 Msa0412790:intron 50.0%
TACCCGTGTCGGATACGTAT+CGG - chr3_2:56563269-56563288 None:intergenic 50.0%
ATACGTATCCGACACGGGTA+CGG + chr3_2:56563269-56563288 Msa0412790:intron 50.0%
!!! CGGCACCATTTTGGAGTATC+CGG + chr3_2:56563289-56563308 Msa0412790:intron 50.0%
!!! GGCACCATTTTGGAGTATCC+GGG + chr3_2:56563290-56563309 Msa0412790:intron 50.0%
GAAGCCCGGATACTCCAAAA+TGG - chr3_2:56563297-56563316 None:intergenic 50.0%
GTAGTTTACAGTCGAGTGGC+TGG + chr3_2:56564389-56564408 Msa0412790:intron 50.0%
TGTGTGTGTCAGTGCTTCAC+AGG - chr3_2:56564452-56564471 None:intergenic 50.0%
CACCAACGTGTGTTGTACAC+CGG - chr3_2:56564626-56564645 None:intergenic 50.0%
! GCTCCTGCAGTTTGAAATGC+AGG - chr3_2:56564974-56564993 None:intergenic 50.0%
CTGACACTGGCACCAATTGT+TGG - chr3_2:56565286-56565305 None:intergenic 50.0%
AAGTGCCTTGTCTGATGCCA+AGG - chr3_2:56565680-56565699 None:intergenic 50.0%
!! CTTGAGTTGGATGCAGCCTT+AGG + chr3_2:56565697-56565716 Msa0412790:CDS 50.0%
TTGAACGCTGCAGGATCCTA+AGG - chr3_2:56565716-56565735 None:intergenic 50.0%
CACAACACACCTCTTTCACG+TGG - chr3_2:56565891-56565910 None:intergenic 50.0%
! GCATGGTGGAAAATGTGAGG+TGG + chr3_2:56566175-56566194 Msa0412790:CDS 50.0%
ACGGATTCCTGACTAGAAGG+CGG - chr3_2:56566392-56566411 None:intergenic 50.0%
ACAACCGCTCCTTAGTATCG+AGG - chr3_2:56566543-56566562 None:intergenic 50.0%
TAAGACCTAAGTGCGCTTCG+CGG - chr3_2:56566852-56566871 None:intergenic 50.0%
! TGTCGCCAAGCATTGCATTC+AGG + chr3_2:56566920-56566939 Msa0412790:intron 50.0%
! GTCGCCAAGCATTGCATTCA+GGG + chr3_2:56566921-56566940 Msa0412790:intron 50.0%
GAAGGACGAGAAAAAGTGGC+AGG + chr3_2:56567108-56567127 Msa0412790:CDS 50.0%
GGCTCATCATCCACTTCATC+AGG - chr3_2:56567262-56567281 None:intergenic 50.0%
GAGCCATCTATAGATCGCAG+CGG + chr3_2:56567277-56567296 Msa0412790:CDS 50.0%
! CTTCAGGTTTGGCGAGTTGA+TGG + chr3_2:56567397-56567416 Msa0412790:intron 50.0%
GACCACACGAGACTTTACAG+TGG + chr3_2:56567448-56567467 Msa0412790:CDS 50.0%
CTCCACTGTAAAGTCTCGTG+TGG - chr3_2:56567453-56567472 None:intergenic 50.0%
GTCTCATCCCTTCCATTTCC+TGG - chr3_2:56567502-56567521 None:intergenic 50.0%
GGCTCAAATTCATGAGGGCA+AGG + chr3_2:56568279-56568298 Msa0412790:intron 50.0%
GAACTCGAAACAGTGCTACC+AGG - chr3_2:56568512-56568531 None:intergenic 50.0%
CACAGCTACCTGTATCTGTG+AGG + chr3_2:56568903-56568922 Msa0412790:CDS 50.0%
CTACCTGTATCTGTGAGGGA+AGG + chr3_2:56568908-56568927 Msa0412790:CDS 50.0%
TTCCCTTCCCTCACAGATAC+AGG - chr3_2:56568914-56568933 None:intergenic 50.0%
CTGGGATGTTCTTGGTGGAA+AGG + chr3_2:56568949-56568968 Msa0412790:CDS 50.0%
GGATGTTCTTGGTGGAAAGG+CGG + chr3_2:56568952-56568971 Msa0412790:CDS 50.0%
CTAGCAAACTTGATCGACGG+AGG - chr3_2:56569441-56569460 None:intergenic 50.0%
ACCCCTAACGGTCACAAAAG+CGG + chr3_2:56569947-56569966 Msa0412790:CDS 50.0%
!! ACCGCTTTTGTGACCGTTAG+GGG - chr3_2:56569951-56569970 None:intergenic 50.0%
!! GAACCGCTTTTGTGACCGTT+AGG - chr3_2:56569953-56569972 None:intergenic 50.0%
ACTACTTCTTCGACGGCCAT+TGG - chr3_2:56569984-56570003 None:intergenic 50.0%
GGCTCAGACTATAGGCAATC+AGG + chr3_2:56570025-56570044 Msa0412790:CDS 50.0%
AAGCTATCTCGGAGAGCTAG+TGG - chr3_2:56570282-56570301 None:intergenic 50.0%
GTTGCTGAAGAATCGGACAG+TGG - chr3_2:56570517-56570536 None:intergenic 50.0%
CCACTCGAAGTTGCTCGTAA+GGG - chr3_2:56570618-56570637 None:intergenic 50.0%
ACCACTCGAAGTTGCTCGTA+AGG - chr3_2:56570619-56570638 None:intergenic 50.0%
GTTTCTCCGAATCCAGTGAC+AGG + chr3_2:56570637-56570656 Msa0412790:CDS 50.0%
CCTGAGTATCCGCGGAGTAT+CGG + chr3_2:56563240-56563259 Msa0412790:intron 55.0%
!! AAATGGTGCCGTACCCGTGT+CGG - chr3_2:56563280-56563299 None:intergenic 55.0%
! ACACGGGTACGGCACCATTT+TGG + chr3_2:56563280-56563299 Msa0412790:intron 55.0%
CTTCACAGGTGTCCGTGCTA+CGG - chr3_2:56564438-56564457 None:intergenic 55.0%
GTCCGGTGTACAACACACGT+TGG + chr3_2:56564621-56564640 Msa0412790:intron 55.0%
CACGACAAACACACCGACAC+CGG - chr3_2:56564701-56564720 None:intergenic 55.0%
GTCGGTGTGTTTGTCGTGTC+CGG + chr3_2:56564703-56564722 Msa0412790:intron 55.0%
CGAAGGTCTGACTCTGACAC+TGG - chr3_2:56565299-56565318 None:intergenic 55.0%
GTGAGGTGGCCACAATAGGT+TGG + chr3_2:56566189-56566208 Msa0412790:intron 55.0%
CGGATTCCTGACTAGAAGGC+GGG - chr3_2:56566391-56566410 None:intergenic 55.0%
GCCTTCTAGTCAGGAATCCG+TGG + chr3_2:56566391-56566410 Msa0412790:CDS 55.0%
GCCACGGATTCCTGACTAGA+AGG - chr3_2:56566395-56566414 None:intergenic 55.0%
AACAACCGCGAAGCGCACTT+AGG + chr3_2:56566844-56566863 Msa0412790:intron 55.0%
! GTGCCGCTGCGATCTATAGA+TGG - chr3_2:56567283-56567302 None:intergenic 55.0%
AGAAGCTCTCAACCTCGGCT+TGG + chr3_2:56569393-56569412 Msa0412790:CDS 55.0%
GCAGACAACTTACCAAGCCG+AGG - chr3_2:56569408-56569427 None:intergenic 55.0%
GCAAACTTGATCGACGGAGG+TGG - chr3_2:56569438-56569457 None:intergenic 55.0%
TCCAGGGACTCTACCCCTAA+CGG + chr3_2:56569935-56569954 Msa0412790:CDS 55.0%
! TCACCTCTACCTAGGAGTGC+AGG + chr3_2:56570004-56570023 Msa0412790:CDS 55.0%
TAGTCTGAGCCTGCACTCCT+AGG - chr3_2:56570016-56570035 None:intergenic 55.0%
GGAGTGCAGGCTCAGACTAT+AGG + chr3_2:56570017-56570036 Msa0412790:CDS 55.0%
TCAAAGAGCTTCTTGGCCGC+TGG - chr3_2:56570076-56570095 None:intergenic 55.0%
GCGGCCAAGAAGCTCTTTGA+AGG + chr3_2:56570076-56570095 Msa0412790:CDS 55.0%
CCCTTACGAGCAACTTCGAG+TGG + chr3_2:56570615-56570634 Msa0412790:CDS 55.0%
CCGATACTCCGCGGATACTC+AGG - chr3_2:56563243-56563262 None:intergenic 60.0%
CAGGTGTCCGTGCTACGGAT+TGG - chr3_2:56564433-56564452 None:intergenic 60.0%
GAAGGCGGGTCTCGAGGAAT+TGG - chr3_2:56566377-56566396 None:intergenic 60.0%
TGACTAGAAGGCGGGTCTCG+AGG - chr3_2:56566383-56566402 None:intergenic 60.0%
TCGAGACCCGCCTTCTAGTC+AGG + chr3_2:56566382-56566401 Msa0412790:CDS 60.0%
ACCGTTAGGGGTAGAGTCCC+TGG - chr3_2:56569939-56569958 None:intergenic 60.0%
GAGCCTGCACTCCTAGGTAG+AGG - chr3_2:56570010-56570029 None:intergenic 60.0%
GCTTCTTGGCCGCTGGAGTA+GGG - chr3_2:56570069-56570088 None:intergenic 60.0%
AGCTTCTTGGCCGCTGGAGT+AGG - chr3_2:56570070-56570089 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 56561194 56571222 56561194 ID=Msa0412790;Name=Msa0412790
chr3_2 mRNA 56561194 56571222 56561194 ID=Msa0412790-mRNA-1;Parent=Msa0412790;Name=Msa0412790-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.95|0.95|0.95|1|1|22|329|1015
chr3_2 exon 56561194 56561505 56561194 ID=Msa0412790-mRNA-1:exon:11515;Parent=Msa0412790-mRNA-1
chr3_2 exon 56564893 56564999 56564893 ID=Msa0412790-mRNA-1:exon:11516;Parent=Msa0412790-mRNA-1
chr3_2 exon 56565256 56565355 56565256 ID=Msa0412790-mRNA-1:exon:11517;Parent=Msa0412790-mRNA-1
chr3_2 exon 56565447 56565515 56565447 ID=Msa0412790-mRNA-1:exon:11518;Parent=Msa0412790-mRNA-1
chr3_2 exon 56565667 56565900 56565667 ID=Msa0412790-mRNA-1:exon:11519;Parent=Msa0412790-mRNA-1
chr3_2 exon 56566029 56566206 56566029 ID=Msa0412790-mRNA-1:exon:11520;Parent=Msa0412790-mRNA-1
chr3_2 exon 56566309 56566435 56566309 ID=Msa0412790-mRNA-1:exon:11521;Parent=Msa0412790-mRNA-1
chr3_2 exon 56566580 56566745 56566580 ID=Msa0412790-mRNA-1:exon:11522;Parent=Msa0412790-mRNA-1
chr3_2 exon 56566979 56567129 56566979 ID=Msa0412790-mRNA-1:exon:11523;Parent=Msa0412790-mRNA-1
chr3_2 exon 56567221 56567309 56567221 ID=Msa0412790-mRNA-1:exon:11524;Parent=Msa0412790-mRNA-1
chr3_2 exon 56567403 56567558 56567403 ID=Msa0412790-mRNA-1:exon:11525;Parent=Msa0412790-mRNA-1
chr3_2 exon 56567974 56568042 56567974 ID=Msa0412790-mRNA-1:exon:11526;Parent=Msa0412790-mRNA-1
chr3_2 exon 56568280 56568348 56568280 ID=Msa0412790-mRNA-1:exon:11527;Parent=Msa0412790-mRNA-1
chr3_2 exon 56568438 56568575 56568438 ID=Msa0412790-mRNA-1:exon:11528;Parent=Msa0412790-mRNA-1
chr3_2 exon 56568666 56568794 56568666 ID=Msa0412790-mRNA-1:exon:11529;Parent=Msa0412790-mRNA-1
chr3_2 exon 56568899 56569046 56568899 ID=Msa0412790-mRNA-1:exon:11530;Parent=Msa0412790-mRNA-1
chr3_2 exon 56569173 56569183 56569173 ID=Msa0412790-mRNA-1:exon:11531;Parent=Msa0412790-mRNA-1
chr3_2 exon 56569274 56569414 56569274 ID=Msa0412790-mRNA-1:exon:11532;Parent=Msa0412790-mRNA-1
chr3_2 exon 56569629 56569754 56569629 ID=Msa0412790-mRNA-1:exon:11533;Parent=Msa0412790-mRNA-1
chr3_2 exon 56569887 56570121 56569887 ID=Msa0412790-mRNA-1:exon:11534;Parent=Msa0412790-mRNA-1
chr3_2 exon 56570503 56570681 56570503 ID=Msa0412790-mRNA-1:exon:11535;Parent=Msa0412790-mRNA-1
chr3_2 exon 56570780 56571222 56570780 ID=Msa0412790-mRNA-1:exon:11536;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56561194 56561505 56561194 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56564893 56564999 56564893 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56565256 56565355 56565256 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56565447 56565515 56565447 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56565667 56565900 56565667 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56566029 56566206 56566029 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56566309 56566435 56566309 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56566580 56566745 56566580 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56566979 56567129 56566979 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56567221 56567309 56567221 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56567403 56567558 56567403 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56567974 56568042 56567974 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56568280 56568348 56568280 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56568438 56568575 56568438 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56568666 56568794 56568666 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56568899 56569046 56568899 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56569173 56569183 56569173 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56569274 56569414 56569274 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56569629 56569754 56569629 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56569887 56570121 56569887 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56570503 56570681 56570503 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 CDS 56570780 56570893 56570780 ID=Msa0412790-mRNA-1:cds;Parent=Msa0412790-mRNA-1
chr3_2 three_prime_UTR 56570894 56571222 56570894 ID=Msa0412790-mRNA-1:three_prime_utr;Parent=Msa0412790-mRNA-1
Gene Sequence

>Msa0412790

ATGGACCCTTTTGATATCGAAGCCTACTTCCAAAAACGTGATGTTGAAGACACTTATATCGTCAACCGATTTATTCAGCGTCGAAAAAAATTAGAGGAAGGTAGTGCATCTCGTACTAGAAAATATTTCAATAGAGATCATGCAGTGGCAAACCAAAGAATAATTGACGACTACTTTGCCAATGAGCCTACGTACGACGATGCAATGTTTCGTCGTCGGTACCGGATAAATCGTACGACGATGCAATCGTTGGAGACCTTTCAAGTAGTGATAACTACTTCACCCAACGAGTTGATGCAGCCAATAAAAAAGAATAATCAAGTGTTGCTTCAAGTTGGTGGAGTATTCAGAGCCATAAAGCCAATGCCTATTATCAATAAAGACTTGGATCCTGCATTTCAAACTGCAGGAGCAAATCCTGGATTGGAAGTTTGGTGTATTGAAAACCAACAATTGGTGCCAGTGTCAGAGTCAGACCTTCGAAAATTCTATACCGGAAGTGCATACATAGTTCTGAATGCGGTTTTTCCCAAAAATGGCCCTCCTCATTATGACATTCATTATTGGCTGGGAAATGACACAAAGAAGGTGGATTCAACCTTGGCATCAGACAAGGCACTTGAGTTGGATGCAGCCTTAGGATCCTGCAGCGTTCAATATAGGGAAATTCAAGGTCAAGAATCACAGAAGTTTCTATCATACTTCAAGCCTTGTTTAATACCCATTGAAGGAGTGTTTACTTCAAAGCAAGGGAATTTGAACGGCGAATATCAAGTCAGCCTGTACACTTGTAAGGGAGACTATGTTGTCCACGTGAAAGAGGTTCCTTTTCTGAGGTCATCATTGAATCACGAAGATGTATTCATACTTGACACTGCATTAAAAATCTTCCTCTTCAGTGGATGCAACTCTACCATTCAAGAAAGAGCCAAAGGTTTGGAGGTTGTTCAATATATCAAGGAGAATAAGCATGGTGGAAAATGTGAGGTGGCCACAATAGAGGATGGAAAATTTGTTGGTGATTCTGATGTCGGAGAGTTCTGGAGTTTATTTGGTGGTTATGCTCCAATTCCTCGAGACCCGCCTTCTAGTCAGGAATCCGTGGCTCCAATTGTAAAGCTATTTTGGATAAATCTACAGGGAAAACTTTGTCCAATTGGAAGCAATACATTCAGCAAAGAAATGCTGGAGTCAGACAAGTGTTATATGTTAGACTGTGATAATGAAATTTTTGTGTGGATGGGAAGGCAGACCTTATTGACCGAAAGAAGAACAGCGATCAAAGCTACAGAAGATTTTGTCAGAAATGAAGGAAGATCCGACAAGACTCATACGACATTTTTATCAGAAGGATTGGAAAGTACCAACTTTAGGTCGCACTTTACTAATTGGCCTAAAACAGTTGAGACTAGGCTTTACGAAGAAGGACGAGAAAAAGTGGCAGCCATATTCAAACATCAGGGTTATGATGTGAAAGAACTTCCTGATGAAGTGGATGATGAGCCATCTATAGATCGCAGCGGCACAATAAAAGTTTGGCGAGTTGATGGCGATGAATTGTCCCTTCTTTCAGTTACCGACCACACGAGACTTTACAGTGGAGATTGCTATGTAGTACAGTATACATTTCCAGGAAATGGAAGGGATGAGACACTGTTTTATGCTTGGCTTGGCAGTAGATGTGTAATGGAGGATAAAACAGCCGCCATTTCCCACATCAATACTATGGTTGATTCATCTAGAAGTAGTCCAGTTATGGCTCAAATTCATGAGGGCAAGGAGCCAGCTCAGTTTTTCTCAATACTCCAAAGGCTAATCATATTCAAGGGGGGAAACAGTTCAGGATATAAGAAGTGTATAGAAGAAAACGGTACGGTGGATGAAACTCACAATGAAAACCTGGTAGCACTGTTTCGAGTTCAAGGTACAAGTCCAGATAATATGCAGGCCATCCAAGTCGATCAAGTTTCGAGCTCTCTGAATTCATCCTATTGCTATATTCTGCAAACTGAAGCAGCTATGTATACATGGATTGGAAGCCTTTCTTCCGCAAGAGACCATACTCTTCTTGATAGAATGGTGGAACTGCTTAACCCGACACAGCTACCTGTATCTGTGAGGGAAGGGAATGAACCTGATATTTTCTGGGATGTTCTTGGTGGAAAGGCGGAATATCCAAAAGAAAAGGAGATTCAAGGATTCATAGATGATCCACATTTGTTTGCATTGAAAATAACCAAAGGAGACTTCAAGGTGAAAGAGATATACAATTATACACAGGATGACTTAATTACTGAAGATGTTTTATTGCTTGATTGCCAAAGAGAGATTTATATTTGGGTTGGATTGCATTCGATTGTCAAATCGAAACAAGAAGCTCTCAACCTCGGCTTGAAATTTTTGGAAATGGATGTCCTTGTTGAAGGCTTATCGCTAGAAGTCCCTATTTATGTTGTAATGGAAGGATACGAGCCGCCATTTTTCACTCGTTTCTTTTCGTGGGATCATTCAAAAGCAAATATTCTTGGTAATTCATTTGAGAGAAAGCTTGCAATTCTGAAAGGAAACTCCAGGGACTCTACCCCTAACGGTCACAAAAGCGGTTCTATCATTTCCAATGGCCGTCGAAGAAGTAGTTCACCTCTACCTAGGAGTGCAGGCTCAGACTATAGGCAATCAGGGAATCGACTTTTTTCTAGCCCTACTCCAGCGGCCAAGAAGCTCTTTGAAGGATCTCCTGCTAATAACAGTGCTGAACAAACAATTCCACTGTCCGATTCTTCAGCAACAGAACTGAGCTCCTCAAATGAGACTGCAAGTTTAACTGAGAAAGACAAAAATGTCGATGATGAGAGTTTGTCAATATACCCTTACGAGCAACTTCGAGTGGTTTCTCCGAATCCAGTGACAGGCATCAATTTAACCAAAAGAGAGGCATATTTATCTCCTGAAGAGTTCCATGAAAAATTTGGAATGCCAAAATCTGCTTTCTACAAACTCCCTAGATGGAAACAAAACAAGCTGAAGATGTCACTTGATCTATTTTAG
Protein sequence

>Msa0412790

MDPFDIEAYFQKRDVEDTYIVNRFIQRRKKLEEGSASRTRKYFNRDHAVANQRIIDDYFANEPTYDDAMFRRRYRINRTTMQSLETFQVVITTSPNELMQPIKKNNQVLLQVGGVFRAIKPMPIINKDLDPAFQTAGANPGLEVWCIENQQLVPVSESDLRKFYTGSAYIVLNAVFPKNGPPHYDIHYWLGNDTKKVDSTLASDKALELDAALGSCSVQYREIQGQESQKFLSYFKPCLIPIEGVFTSKQGNLNGEYQVSLYTCKGDYVVHVKEVPFLRSSLNHEDVFILDTALKIFLFSGCNSTIQERAKGLEVVQYIKENKHGGKCEVATIEDGKFVGDSDVGEFWSLFGGYAPIPRDPPSSQESVAPIVKLFWINLQGKLCPIGSNTFSKEMLESDKCYMLDCDNEIFVWMGRQTLLTERRTAIKATEDFVRNEGRSDKTHTTFLSEGLESTNFRSHFTNWPKTVETRLYEEGREKVAAIFKHQGYDVKELPDEVDDEPSIDRSGTIKVWRVDGDELSLLSVTDHTRLYSGDCYVVQYTFPGNGRDETLFYAWLGSRCVMEDKTAAISHINTMVDSSRSSPVMAQIHEGKEPAQFFSILQRLIIFKGGNSSGYKKCIEENGTVDETHNENLVALFRVQGTSPDNMQAIQVDQVSSSLNSSYCYILQTEAAMYTWIGSLSSARDHTLLDRMVELLNPTQLPVSVREGNEPDIFWDVLGGKAEYPKEKEIQGFIDDPHLFALKITKGDFKVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSIVKSKQEALNLGLKFLEMDVLVEGLSLEVPIYVVMEGYEPPFFTRFFSWDHSKANILGNSFERKLAILKGNSRDSTPNGHKSGSIISNGRRRSSSPLPRSAGSDYRQSGNRLFSSPTPAAKKLFEGSPANNSAEQTIPLSDSSATELSSSNETASLTEKDKNVDDESLSIYPYEQLRVVSPNPVTGINLTKREAYLSPEEFHEKFGMPKSAFYKLPRWKQNKLKMSLDLF*