Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382300 | XP_013465951.1 | 98.126 | 427 | 7 | 1 | 1 | 427 | 1 | 426 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382300 | sp|Q6NKN9|BH074_ARATH | 42.664 | 443 | 161 | 21 | 1 | 427 | 1 | 366 | 1.10e-74 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382300 | A0A072VPD3 | 98.126 | 427 | 7 | 1 | 1 | 427 | 1 | 426 | 0.0 | 855 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1382300 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1382300 | 0.841049 | 6.014611e-58 | -8.615850e-47 |
| Msa0001940 | Msa1382300 | 0.821856 | 3.232632e-53 | -8.615850e-47 |
| Msa0001960 | Msa1382300 | 0.914911 | 1.099074e-84 | -8.615850e-47 |
| Msa0002580 | Msa1382300 | 0.837632 | 4.635078e-57 | -8.615850e-47 |
| Msa0017670 | Msa1382300 | 0.856121 | 3.986084e-62 | -8.615850e-47 |
| Msa0017930 | Msa1382300 | 0.970063 | 4.746892e-131 | -8.615850e-47 |
| Msa0017950 | Msa1382300 | 0.833724 | 4.524962e-56 | -8.615850e-47 |
| Msa0040790 | Msa1382300 | 0.800970 | 1.122400e-48 | -8.615850e-47 |
| Msa0042640 | Msa1382300 | 0.843125 | 1.698662e-58 | -8.615850e-47 |
| Msa0048510 | Msa1382300 | 0.814198 | 1.740903e-51 | -8.615850e-47 |
| Msa0050660 | Msa1382300 | 0.802666 | 5.034400e-49 | -8.615850e-47 |
| Msa0050700 | Msa1382300 | 0.804804 | 1.812099e-49 | -8.615850e-47 |
| Msa0050790 | Msa1382300 | 0.815574 | 8.623037e-52 | -8.615850e-47 |
| Msa0074600 | Msa1382300 | 0.809325 | 2.000770e-50 | -8.615850e-47 |
| Msa0077340 | Msa1382300 | 0.852821 | 3.589746e-61 | -8.615850e-47 |
| Msa0077560 | Msa1382300 | 0.811389 | 7.174581e-51 | -8.615850e-47 |
| Msa0081020 | Msa1382300 | 0.811871 | 5.635654e-51 | -8.615850e-47 |
| Msa0094780 | Msa1382300 | 0.827582 | 1.444987e-54 | -8.615850e-47 |
| Msa0094790 | Msa1382300 | 0.818181 | 2.240694e-52 | -8.615850e-47 |
| Msa0098040 | Msa1382300 | 0.859075 | 5.316282e-63 | -8.615850e-47 |
| Msa0098070 | Msa1382300 | 0.827933 | 1.189531e-54 | -8.615850e-47 |
| Msa0102240 | Msa1382300 | 0.814889 | 1.223841e-51 | -8.615850e-47 |
| Msa0108410 | Msa1382300 | 0.814103 | 1.826860e-51 | -8.615850e-47 |
| Msa1346560 | Msa1382300 | 0.815129 | 1.082910e-51 | -8.615850e-47 |
| Msa1348090 | Msa1382300 | 0.835262 | 1.858893e-56 | -8.615850e-47 |
| Msa1355450 | Msa1382300 | 0.818683 | 1.724393e-52 | -8.615850e-47 |
| Msa1356600 | Msa1382300 | -0.812942 | 3.289143e-51 | -8.615850e-47 |
| Msa1372040 | Msa1382300 | 0.817261 | 3.614725e-52 | -8.615850e-47 |
| Msa1382300 | Msa1389900 | 0.818923 | 1.520948e-52 | -8.615850e-47 |
| Msa1382300 | Msa1392580 | 0.809357 | 1.969118e-50 | -8.615850e-47 |
| Msa1382300 | Msa1393780 | 0.826866 | 2.143832e-54 | -8.615850e-47 |
| Msa1382300 | Msa1403710 | 0.809718 | 1.647845e-50 | -8.615850e-47 |
| Msa1382300 | Msa1405460 | 0.853291 | 2.633613e-61 | -8.615850e-47 |
| Msa1382300 | Msa1412000 | 0.836739 | 7.841543e-57 | -8.615850e-47 |
| Msa1382300 | Msa1413620 | 0.810976 | 8.818933e-51 | -8.615850e-47 |
| Msa1382300 | Msa1415540 | 0.824700 | 7.002229e-54 | -8.615850e-47 |
| Msa1382300 | Msa1425880 | 0.806913 | 6.530381e-50 | -8.615850e-47 |
| Msa1382300 | Msa1427100 | 0.884099 | 2.559942e-71 | -8.615850e-47 |
| Msa1382300 | Msa1427110 | 0.816846 | 4.479819e-52 | -8.615850e-47 |
| Msa1382300 | Msa1431480 | 0.801025 | 1.093978e-48 | -8.615850e-47 |
| Msa1382300 | Msa1440630 | 0.813182 | 2.913080e-51 | -8.615850e-47 |
| Msa1382300 | Msa1440960 | 0.816019 | 6.862414e-52 | -8.615850e-47 |
| Msa1382300 | Msa1441570 | 0.805241 | 1.467703e-49 | -8.615850e-47 |
| Msa1382300 | Msa1448680 | 0.815346 | 9.690174e-52 | -8.615850e-47 |
| Msa1382300 | Msa1461370 | 0.819359 | 1.210738e-52 | -8.615850e-47 |
| Msa1382300 | Msa1464090 | 0.813424 | 2.577265e-51 | -8.615850e-47 |
| Msa0610320 | Msa1382300 | 0.805563 | 1.256828e-49 | -8.615850e-47 |
| Msa0611210 | Msa1382300 | 0.876242 | 1.631441e-68 | -8.615850e-47 |
| Msa0619780 | Msa1382300 | 0.834365 | 3.125934e-56 | -8.615850e-47 |
| Msa0624420 | Msa1382300 | 0.807818 | 4.198142e-50 | -8.615850e-47 |
| Msa0624900 | Msa1382300 | 0.818950 | 1.500273e-52 | -8.615850e-47 |
| Msa0626450 | Msa1382300 | 0.818640 | 1.764330e-52 | -8.615850e-47 |
| Msa0626490 | Msa1382300 | 0.814734 | 1.324906e-51 | -8.615850e-47 |
| Msa0640110 | Msa1382300 | 0.806571 | 7.711988e-50 | -8.615850e-47 |
| Msa0644410 | Msa1382300 | 0.819288 | 1.256753e-52 | -8.615850e-47 |
| Msa0651550 | Msa1382300 | 0.861235 | 1.182754e-63 | -8.615850e-47 |
| Msa0652770 | Msa1382300 | 0.834943 | 2.236754e-56 | -8.615850e-47 |
| Msa0658580 | Msa1382300 | 0.810374 | 1.189761e-50 | -8.615850e-47 |
| Msa0664600 | Msa1382300 | 0.816854 | 4.462361e-52 | -8.615850e-47 |
| Msa0674480 | Msa1382300 | 0.847457 | 1.142308e-59 | -8.615850e-47 |
| Msa0675330 | Msa1382300 | 0.806423 | 8.286895e-50 | -8.615850e-47 |
| Msa0678380 | Msa1382300 | 0.800557 | 1.362956e-48 | -8.615850e-47 |
| Msa0693340 | Msa1382300 | -0.809273 | 2.052904e-50 | -8.615850e-47 |
| Msa0698910 | Msa1382300 | 0.805188 | 1.505615e-49 | -8.615850e-47 |
| Msa0702720 | Msa1382300 | 0.820580 | 6.361723e-53 | -8.615850e-47 |
| Msa0703540 | Msa1382300 | 0.811197 | 7.898685e-51 | -8.615850e-47 |
| Msa0703950 | Msa1382300 | 0.807518 | 4.860255e-50 | -8.615850e-47 |
| Msa0706230 | Msa1382300 | 0.839554 | 1.478076e-57 | -8.615850e-47 |
| Msa0709270 | Msa1382300 | 0.800763 | 1.237050e-48 | -8.615850e-47 |
| Msa0720410 | Msa1382300 | 0.820116 | 8.131010e-53 | -8.615850e-47 |
| Msa0729270 | Msa1382300 | 0.808576 | 2.893335e-50 | -8.615850e-47 |
| Msa0734250 | Msa1382300 | 0.827756 | 1.312537e-54 | -8.615850e-47 |
| Msa0735780 | Msa1382300 | 0.804572 | 2.025596e-49 | -8.615850e-47 |
| Msa0741220 | Msa1382300 | 0.800398 | 1.468490e-48 | -8.615850e-47 |
| Msa0752450 | Msa1382300 | 0.843076 | 1.750321e-58 | -8.615850e-47 |
| Msa0760970 | Msa1382300 | 0.840295 | 9.476772e-58 | -8.615850e-47 |
| Msa0769690 | Msa1382300 | 0.852794 | 3.654308e-61 | -8.615850e-47 |
| Msa0780570 | Msa1382300 | 0.814876 | 1.232578e-51 | -8.615850e-47 |
| Msa0792370 | Msa1382300 | 0.860822 | 1.579294e-63 | -8.615850e-47 |
| Msa0795750 | Msa1382300 | 0.832775 | 7.799810e-56 | -8.615850e-47 |
| Msa0795870 | Msa1382300 | 0.808024 | 3.794132e-50 | -8.615850e-47 |
| Msa0799970 | Msa1382300 | 0.817352 | 3.447218e-52 | -8.615850e-47 |
| Msa0803250 | Msa1382300 | 0.841135 | 5.707585e-58 | -8.615850e-47 |
| Msa0822730 | Msa1382300 | 0.843674 | 1.211507e-58 | -8.615850e-47 |
| Msa0826950 | Msa1382300 | 0.816559 | 5.196380e-52 | -8.615850e-47 |
| Msa0829300 | Msa1382300 | 0.802390 | 5.739408e-49 | -8.615850e-47 |
| Msa0829330 | Msa1382300 | 0.811939 | 5.446679e-51 | -8.615850e-47 |
| Msa0832120 | Msa1382300 | 0.806510 | 7.943544e-50 | -8.615850e-47 |
| Msa0833530 | Msa1382300 | 0.843044 | 1.784446e-58 | -8.615850e-47 |
| Msa0833650 | Msa1382300 | 0.807059 | 6.081284e-50 | -8.615850e-47 |
| Msa0835490 | Msa1382300 | 0.808671 | 2.761442e-50 | -8.615850e-47 |
| Msa0841590 | Msa1382300 | 0.828846 | 7.164972e-55 | -8.615850e-47 |
| Msa0125360 | Msa1382300 | 0.814350 | 1.611383e-51 | -8.615850e-47 |
| Msa0126040 | Msa1382300 | 0.801752 | 7.762638e-49 | -8.615850e-47 |
| Msa0140130 | Msa1382300 | 0.823145 | 1.621772e-53 | -8.615850e-47 |
| Msa0140280 | Msa1382300 | 0.807504 | 4.894567e-50 | -8.615850e-47 |
| Msa0174450 | Msa1382300 | 0.822427 | 2.383051e-53 | -8.615850e-47 |
| Msa0184500 | Msa1382300 | 0.815109 | 1.093790e-51 | -8.615850e-47 |
| Msa0205110 | Msa1382300 | 0.802141 | 6.459293e-49 | -8.615850e-47 |
| Msa0219270 | Msa1382300 | 0.805188 | 1.506152e-49 | -8.615850e-47 |
| Msa0221000 | Msa1382300 | 0.807567 | 4.745123e-50 | -8.615850e-47 |
| Msa0225100 | Msa1382300 | 0.809247 | 2.079458e-50 | -8.615850e-47 |
| Msa0230840 | Msa1382300 | 0.804002 | 2.662307e-49 | -8.615850e-47 |
| Msa0231200 | Msa1382300 | 0.803913 | 2.778582e-49 | -8.615850e-47 |
| Msa0235290 | Msa1382300 | 0.824108 | 9.651657e-54 | -8.615850e-47 |
| Msa1225860 | Msa1382300 | -0.827773 | 1.299814e-54 | -8.615850e-47 |
| Msa1265650 | Msa1382300 | 0.836943 | 6.957620e-57 | -8.615850e-47 |
| Msa1297230 | Msa1382300 | 0.820800 | 5.664742e-53 | -8.615850e-47 |
| Msa1303560 | Msa1382300 | 0.848294 | 6.719648e-60 | -8.615850e-47 |
| Msa1303650 | Msa1382300 | 0.845227 | 4.630619e-59 | -8.615850e-47 |
| Msa1340200 | Msa1382300 | 0.809000 | 2.348915e-50 | -8.615850e-47 |
| Msa1341840 | Msa1382300 | 0.839469 | 1.555794e-57 | -8.615850e-47 |
| Msa1343430 | Msa1382300 | 0.811485 | 6.838985e-51 | -8.615850e-47 |
| Msa0365210 | Msa1382300 | 0.808472 | 3.045748e-50 | -8.615850e-47 |
| Msa0367690 | Msa1382300 | 0.848816 | 4.814598e-60 | -8.615850e-47 |
| Msa0369790 | Msa1382300 | 0.803047 | 4.200099e-49 | -8.615850e-47 |
| Msa0380670 | Msa1382300 | 0.805716 | 1.166951e-49 | -8.615850e-47 |
| Msa0412790 | Msa1382300 | 0.826100 | 3.265667e-54 | -8.615850e-47 |
| Msa0415450 | Msa1382300 | 0.825114 | 5.590605e-54 | -8.615850e-47 |
| Msa0426530 | Msa1382300 | 0.828132 | 1.065396e-54 | -8.615850e-47 |
| Msa0427700 | Msa1382300 | 0.808947 | 2.411191e-50 | -8.615850e-47 |
| Msa0428370 | Msa1382300 | 0.832026 | 1.195066e-55 | -8.615850e-47 |
| Msa0428920 | Msa1382300 | 0.800144 | 1.653863e-48 | -8.615850e-47 |
| Msa0430300 | Msa1382300 | 0.814679 | 1.362497e-51 | -8.615850e-47 |
| Msa0436910 | Msa1382300 | 0.835156 | 1.977100e-56 | -8.615850e-47 |
| Msa0457560 | Msa1382300 | 0.805797 | 1.122023e-49 | -8.615850e-47 |
| Msa0460070 | Msa1382300 | 0.808759 | 2.644729e-50 | -8.615850e-47 |
| Msa0464000 | Msa1382300 | 0.800848 | 1.188796e-48 | -8.615850e-47 |
| Msa0465530 | Msa1382300 | 0.803056 | 4.182422e-49 | -8.615850e-47 |
| Msa0474730 | Msa1382300 | 0.805493 | 1.299861e-49 | -8.615850e-47 |
| Msa1021590 | Msa1382300 | 0.853595 | 2.154168e-61 | -8.615850e-47 |
| Msa1023570 | Msa1382300 | 0.800145 | 1.653483e-48 | -8.615850e-47 |
| Msa1044250 | Msa1382300 | 0.817495 | 3.200796e-52 | -8.615850e-47 |
| Msa1044680 | Msa1382300 | 0.852842 | 3.539528e-61 | -8.615850e-47 |
| Msa1051900 | Msa1382300 | 0.810937 | 8.991327e-51 | -8.615850e-47 |
| Msa1072940 | Msa1382300 | 0.805277 | 1.442943e-49 | -8.615850e-47 |
| Msa1085330 | Msa1382300 | 0.826563 | 2.533370e-54 | -8.615850e-47 |
| Msa1096960 | Msa1382300 | 0.838616 | 2.587093e-57 | -8.615850e-47 |
| Msa1099710 | Msa1382300 | 0.814441 | 1.538125e-51 | -8.615850e-47 |
| Msa1101880 | Msa1382300 | 0.823121 | 1.642243e-53 | -8.615850e-47 |
| Msa1105640 | Msa1382300 | 0.840796 | 7.005892e-58 | -8.615850e-47 |
| Msa1106590 | Msa1382300 | 0.823674 | 1.219589e-53 | -8.615850e-47 |
| Msa0240900 | Msa1382300 | 0.818381 | 2.018893e-52 | -8.615850e-47 |
| Msa0241610 | Msa1382300 | 0.819499 | 1.124617e-52 | -8.615850e-47 |
| Msa0244640 | Msa1382300 | 0.844753 | 6.219216e-59 | -8.615850e-47 |
| Msa0244900 | Msa1382300 | 0.800776 | 1.229640e-48 | -8.615850e-47 |
| Msa0251710 | Msa1382300 | 0.832620 | 8.521840e-56 | -8.615850e-47 |
| Msa0263230 | Msa1382300 | 0.813976 | 1.948548e-51 | -8.615850e-47 |
| Msa0266180 | Msa1382300 | 0.819722 | 1.000132e-52 | -8.615850e-47 |
| Msa0279690 | Msa1382300 | 0.801009 | 1.102281e-48 | -8.615850e-47 |
| Msa0281470 | Msa1382300 | 0.809629 | 1.721331e-50 | -8.615850e-47 |
| Msa0283330 | Msa1382300 | 0.824276 | 8.813604e-54 | -8.615850e-47 |
| Msa0290720 | Msa1382300 | 0.831445 | 1.663063e-55 | -8.615850e-47 |
| Msa0298980 | Msa1382300 | 0.804393 | 2.207837e-49 | -8.615850e-47 |
| Msa0307270 | Msa1382300 | 0.809914 | 1.495018e-50 | -8.615850e-47 |
| Msa0307670 | Msa1382300 | 0.862503 | 4.840801e-64 | -8.615850e-47 |
| Msa0313900 | Msa1382300 | 0.829501 | 4.967979e-55 | -8.615850e-47 |
| Msa0321620 | Msa1382300 | 0.857681 | 1.383252e-62 | -8.615850e-47 |
| Msa0323270 | Msa1382300 | 0.809655 | 1.700011e-50 | -8.615850e-47 |
| Msa0330520 | Msa1382300 | 0.854232 | 1.411642e-61 | -8.615850e-47 |
| Msa0336110 | Msa1382300 | 0.807312 | 5.374979e-50 | -8.615850e-47 |
| Msa0337700 | Msa1382300 | 0.816578 | 5.145330e-52 | -8.615850e-47 |
| Msa1111380 | Msa1382300 | 0.821818 | 3.297438e-53 | -8.615850e-47 |
| Msa1115740 | Msa1382300 | 0.807255 | 5.526177e-50 | -8.615850e-47 |
| Msa1123210 | Msa1382300 | 0.828247 | 9.997496e-55 | -8.615850e-47 |
| Msa1132840 | Msa1382300 | 0.808662 | 2.773927e-50 | -8.615850e-47 |
| Msa1140220 | Msa1382300 | 0.822641 | 2.125018e-53 | -8.615850e-47 |
| Msa1145300 | Msa1382300 | 0.830859 | 2.316589e-55 | -8.615850e-47 |
| Msa1145810 | Msa1382300 | 0.815399 | 9.431210e-52 | -8.615850e-47 |
| Msa1148960 | Msa1382300 | 0.840385 | 8.979142e-58 | -8.615850e-47 |
| Msa1155170 | Msa1382300 | -0.813686 | 2.257314e-51 | -8.615850e-47 |
| Msa1162770 | Msa1382300 | 0.818012 | 2.446875e-52 | -8.615850e-47 |
| Msa1163100 | Msa1382300 | 0.816263 | 6.051781e-52 | -8.615850e-47 |
| Msa1184890 | Msa1382300 | 0.840741 | 7.245085e-58 | -8.615850e-47 |
| Msa1186020 | Msa1382300 | 0.808433 | 3.104211e-50 | -8.615850e-47 |
| Msa1190180 | Msa1382300 | 0.805271 | 1.447166e-49 | -8.615850e-47 |
| Msa1192560 | Msa1382300 | 0.817371 | 3.413418e-52 | -8.615850e-47 |
| Msa1192590 | Msa1382300 | 0.815131 | 1.081564e-51 | -8.615850e-47 |
| Msa1205280 | Msa1382300 | 0.818099 | 2.338901e-52 | -8.615850e-47 |
| Msa1208950 | Msa1382300 | 0.819058 | 1.417276e-52 | -8.615850e-47 |
| Msa0483100 | Msa1382300 | 0.800546 | 1.370136e-48 | -8.615850e-47 |
| Msa0509550 | Msa1382300 | 0.800886 | 1.167995e-48 | -8.615850e-47 |
| Msa0517250 | Msa1382300 | 0.843897 | 1.056236e-58 | -8.615850e-47 |
| Msa0519750 | Msa1382300 | 0.876952 | 9.269979e-69 | -8.615850e-47 |
| Msa0519760 | Msa1382300 | 0.817334 | 3.481137e-52 | -8.615850e-47 |
| Msa0519810 | Msa1382300 | 0.806454 | 8.161164e-50 | -8.615850e-47 |
| Msa0519820 | Msa1382300 | 0.885950 | 5.225543e-72 | -8.615850e-47 |
| Msa0519830 | Msa1382300 | 0.878545 | 2.575154e-69 | -8.615850e-47 |
| Msa0519840 | Msa1382300 | 0.817312 | 3.519976e-52 | -8.615850e-47 |
| Msa0528570 | Msa1382300 | 0.828257 | 9.941734e-55 | -8.615850e-47 |
| Msa0529030 | Msa1382300 | 0.849645 | 2.830546e-60 | -8.615850e-47 |
| Msa0543560 | Msa1382300 | 0.832721 | 8.042270e-56 | -8.615850e-47 |
| Msa0548470 | Msa1382300 | 0.827562 | 1.460992e-54 | -8.615850e-47 |
| Msa0550050 | Msa1382300 | 0.806722 | 7.165113e-50 | -8.615850e-47 |
| Msa0555860 | Msa1382300 | -0.817915 | 2.573497e-52 | -8.615850e-47 |
| Msa0571290 | Msa1382300 | 0.828083 | 1.094711e-54 | -8.615850e-47 |
| Msa0576790 | Msa1382300 | 0.847795 | 9.224194e-60 | -8.615850e-47 |
| Msa0580370 | Msa1382300 | 0.805742 | 1.152364e-49 | -8.615850e-47 |
| Msa0581470 | Msa1382300 | 0.830586 | 2.701224e-55 | -8.615850e-47 |
| Msa0583360 | Msa1382300 | -0.826442 | 2.706882e-54 | -8.615850e-47 |
| Msa0585020 | Msa1382300 | 0.802267 | 6.085323e-49 | -8.615850e-47 |
| Msa0597270 | Msa1382300 | 0.827281 | 1.706277e-54 | -8.615850e-47 |
| Msa0599420 | Msa1382300 | 0.827831 | 1.258974e-54 | -8.615850e-47 |
| Msa0855870 | Msa1382300 | 0.804032 | 2.623920e-49 | -8.615850e-47 |
| Msa0862120 | Msa1382300 | 0.813956 | 1.968551e-51 | -8.615850e-47 |
| Msa0869280 | Msa1382300 | 0.805842 | 1.097988e-49 | -8.615850e-47 |
| Msa0945190 | Msa1382300 | 0.833253 | 5.929908e-56 | -8.615850e-47 |
| Msa0945490 | Msa1382300 | 0.805595 | 1.237205e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382300 | MtrunA17_Chr1g0152131 | 98.126 | 427 | 7 | 1 | 1 | 427 | 1 | 426 | 0.0 | 855 |
| Msa1382300 | MtrunA17_Chr8g0365941 | 42.405 | 316 | 127 | 10 | 105 | 391 | 126 | 415 | 4.72e-56 | 192 |
| Msa1382300 | MtrunA17_Chr5g0421111 | 54.412 | 204 | 64 | 6 | 192 | 391 | 297 | 475 | 7.36e-56 | 193 |
| Msa1382300 | MtrunA17_Chr7g0234761 | 39.752 | 322 | 152 | 8 | 75 | 355 | 91 | 411 | 7.77e-51 | 179 |
| Msa1382300 | MtrunA17_Chr3g0144641 | 46.890 | 209 | 79 | 4 | 233 | 409 | 163 | 371 | 1.62e-50 | 175 |
| Msa1382300 | MtrunA17_Chr8g0339091 | 38.810 | 353 | 161 | 15 | 88 | 391 | 81 | 427 | 1.63e-48 | 172 |
| Msa1382300 | MtrunA17_Chr4g0035101 | 70.093 | 107 | 30 | 1 | 244 | 348 | 124 | 230 | 3.43e-44 | 157 |
| Msa1382300 | MtrunA17_Chr8g0363921 | 46.970 | 198 | 97 | 4 | 171 | 360 | 53 | 250 | 2.74e-42 | 150 |
| Msa1382300 | MtrunA17_Chr3g0131771 | 66.981 | 106 | 32 | 1 | 243 | 345 | 129 | 234 | 1.84e-40 | 147 |
| Msa1382300 | MtrunA17_Chr8g0385911 | 73.626 | 91 | 21 | 1 | 258 | 345 | 142 | 232 | 6.73e-40 | 145 |
| Msa1382300 | MtrunA17_Chr7g0258161 | 68.041 | 97 | 31 | 0 | 250 | 346 | 162 | 258 | 1.23e-39 | 145 |
| Msa1382300 | MtrunA17_Chr5g0415291 | 60.484 | 124 | 44 | 2 | 209 | 332 | 65 | 183 | 1.55e-38 | 139 |
| Msa1382300 | MtrunA17_Chr1g0174161 | 63.918 | 97 | 35 | 0 | 250 | 346 | 149 | 245 | 3.63e-37 | 138 |
| Msa1382300 | MtrunA17_Chr6g0484271 | 60.000 | 100 | 39 | 1 | 241 | 340 | 136 | 234 | 3.68e-32 | 123 |
| Msa1382300 | MtrunA17_Chr4g0074161 | 60.241 | 83 | 32 | 1 | 244 | 326 | 189 | 270 | 2.62e-22 | 98.2 |
| Msa1382300 | MtrunA17_Chr1g0190731 | 67.164 | 67 | 21 | 1 | 260 | 326 | 192 | 257 | 6.46e-21 | 93.6 |
| Msa1382300 | MtrunA17_Chr4g0014771 | 58.462 | 65 | 27 | 0 | 261 | 325 | 118 | 182 | 1.43e-16 | 77.8 |
| Msa1382300 | MtrunA17_Chr2g0329041 | 43.158 | 95 | 46 | 1 | 247 | 333 | 310 | 404 | 4.03e-16 | 79.7 |
| Msa1382300 | MtrunA17_Chr1g0174271 | 52.055 | 73 | 35 | 0 | 259 | 331 | 296 | 368 | 4.37e-16 | 79.3 |
| Msa1382300 | MtrunA17_Chr7g0258181 | 52.113 | 71 | 34 | 0 | 261 | 331 | 243 | 313 | 5.70e-16 | 78.6 |
| Msa1382300 | MtrunA17_Chr4g0032951 | 56.716 | 67 | 29 | 0 | 259 | 325 | 353 | 419 | 5.93e-16 | 79.3 |
| Msa1382300 | MtrunA17_Chr1g0193321 | 47.945 | 73 | 37 | 1 | 263 | 335 | 464 | 535 | 1.17e-15 | 79.3 |
| Msa1382300 | MtrunA17_Chr1g0184841 | 51.579 | 95 | 45 | 1 | 232 | 326 | 91 | 184 | 3.34e-15 | 75.5 |
| Msa1382300 | MtrunA17_Chr1g0182791 | 52.174 | 69 | 32 | 1 | 263 | 331 | 319 | 386 | 4.91e-15 | 77.0 |
| Msa1382300 | MtrunA17_Chr3g0095391 | 44.000 | 100 | 51 | 3 | 231 | 326 | 275 | 373 | 3.10e-13 | 71.2 |
| Msa1382300 | MtrunA17_Chr3g0087771 | 47.761 | 67 | 35 | 0 | 259 | 325 | 320 | 386 | 5.58e-13 | 70.1 |
| Msa1382300 | MtrunA17_Chr7g0262691 | 40.000 | 100 | 56 | 2 | 230 | 326 | 218 | 316 | 7.55e-13 | 70.1 |
| Msa1382300 | MtrunA17_Chr7g0270871 | 48.387 | 62 | 31 | 1 | 272 | 333 | 213 | 273 | 2.55e-12 | 68.2 |
| Msa1382300 | MtrunA17_Chr1g0152651 | 50.769 | 65 | 31 | 1 | 261 | 325 | 274 | 337 | 2.87e-12 | 67.8 |
| Msa1382300 | MtrunA17_Chr1g0153241 | 46.154 | 65 | 34 | 1 | 263 | 327 | 87 | 150 | 5.30e-12 | 65.9 |
| Msa1382300 | MtrunA17_Chr8g0351881 | 39.506 | 81 | 41 | 1 | 253 | 325 | 300 | 380 | 5.85e-12 | 67.0 |
| Msa1382300 | MtrunA17_Chr7g0271251 | 53.125 | 64 | 29 | 1 | 263 | 326 | 434 | 496 | 1.31e-11 | 66.6 |
| Msa1382300 | MtrunA17_Chr3g0134741 | 51.562 | 64 | 30 | 1 | 262 | 325 | 230 | 292 | 2.16e-11 | 64.7 |
| Msa1382300 | MtrunA17_Chr7g0231461 | 48.438 | 64 | 32 | 1 | 261 | 324 | 297 | 359 | 6.37e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382300 | AT1G10120.2 | 42.664 | 443 | 161 | 21 | 1 | 427 | 1 | 366 | 1.11e-75 | 240 |
| Msa1382300 | AT1G10120.1 | 42.664 | 443 | 161 | 21 | 1 | 427 | 1 | 366 | 1.11e-75 | 240 |
| Msa1382300 | AT1G68920.3 | 63.871 | 155 | 30 | 3 | 238 | 392 | 285 | 413 | 5.52e-55 | 190 |
| Msa1382300 | AT1G68920.1 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.69e-55 | 190 |
| Msa1382300 | AT1G68920.4 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.69e-55 | 190 |
| Msa1382300 | AT1G68920.2 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.69e-55 | 190 |
| Msa1382300 | AT1G26260.3 | 69.231 | 130 | 34 | 2 | 226 | 350 | 133 | 261 | 3.33e-51 | 176 |
| Msa1382300 | AT1G26260.5 | 64.583 | 144 | 45 | 2 | 212 | 350 | 148 | 290 | 6.15e-51 | 176 |
| Msa1382300 | AT1G26260.4 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.50e-51 | 176 |
| Msa1382300 | AT1G26260.1 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.50e-51 | 176 |
| Msa1382300 | AT1G26260.6 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.50e-51 | 176 |
| Msa1382300 | AT1G26260.2 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.50e-51 | 176 |
| Msa1382300 | AT3G07340.2 | 68.595 | 121 | 37 | 1 | 230 | 350 | 228 | 347 | 3.74e-48 | 170 |
| Msa1382300 | AT3G07340.1 | 68.595 | 121 | 37 | 1 | 230 | 350 | 228 | 347 | 6.61e-48 | 170 |
| Msa1382300 | AT3G23690.1 | 54.598 | 174 | 65 | 5 | 245 | 408 | 176 | 345 | 2.67e-46 | 164 |
| Msa1382300 | AT4G34530.1 | 70.408 | 98 | 29 | 0 | 250 | 347 | 161 | 258 | 3.67e-43 | 154 |
| Msa1382300 | AT5G48560.2 | 77.419 | 93 | 20 | 1 | 257 | 348 | 297 | 389 | 6.89e-43 | 157 |
| Msa1382300 | AT5G48560.1 | 77.419 | 93 | 20 | 1 | 257 | 348 | 297 | 389 | 1.20e-42 | 157 |
| Msa1382300 | AT5G50915.3 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 3.99e-42 | 150 |
| Msa1382300 | AT5G50915.4 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 3.99e-42 | 150 |
| Msa1382300 | AT5G50915.1 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 5.11e-42 | 150 |
| Msa1382300 | AT5G50915.2 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 5.11e-42 | 150 |
| Msa1382300 | AT3G57800.2 | 37.838 | 259 | 122 | 5 | 126 | 346 | 32 | 289 | 2.31e-40 | 148 |
| Msa1382300 | AT1G59640.1 | 53.623 | 138 | 57 | 2 | 212 | 349 | 94 | 224 | 3.71e-40 | 144 |
| Msa1382300 | AT4G36540.1 | 55.474 | 137 | 55 | 3 | 210 | 345 | 94 | 225 | 4.22e-40 | 145 |
| Msa1382300 | AT4G36540.2 | 55.474 | 137 | 55 | 3 | 210 | 345 | 94 | 225 | 4.41e-40 | 145 |
| Msa1382300 | AT1G59640.2 | 53.285 | 137 | 57 | 2 | 212 | 348 | 94 | 223 | 7.08e-40 | 146 |
| Msa1382300 | AT2G18300.1 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 1.35e-39 | 145 |
| Msa1382300 | AT2G18300.2 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 1.40e-39 | 145 |
| Msa1382300 | AT2G18300.3 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 2.84e-39 | 145 |
| Msa1382300 | AT2G42300.4 | 62.500 | 96 | 36 | 0 | 252 | 347 | 176 | 271 | 1.52e-37 | 138 |
| Msa1382300 | AT2G42300.1 | 63.158 | 95 | 35 | 0 | 252 | 346 | 176 | 270 | 1.32e-36 | 137 |
| Msa1382300 | AT5G62610.2 | 49.686 | 159 | 67 | 4 | 186 | 332 | 67 | 224 | 1.13e-35 | 133 |
| Msa1382300 | AT5G62610.1 | 49.686 | 159 | 67 | 4 | 186 | 332 | 67 | 224 | 1.13e-35 | 133 |
| Msa1382300 | AT1G18400.2 | 70.732 | 82 | 24 | 0 | 259 | 340 | 143 | 224 | 6.69e-33 | 124 |
| Msa1382300 | AT1G18400.1 | 70.732 | 82 | 24 | 0 | 259 | 340 | 143 | 224 | 1.03e-32 | 124 |
| Msa1382300 | AT1G73830.2 | 69.136 | 81 | 25 | 0 | 260 | 340 | 146 | 226 | 8.98e-32 | 122 |
| Msa1382300 | AT1G73830.1 | 69.136 | 81 | 25 | 0 | 260 | 340 | 146 | 226 | 9.19e-32 | 122 |
| Msa1382300 | AT3G57800.1 | 32.026 | 306 | 122 | 6 | 126 | 346 | 32 | 336 | 1.17e-31 | 125 |
| Msa1382300 | AT1G25330.1 | 50.806 | 124 | 50 | 1 | 257 | 369 | 100 | 223 | 2.29e-31 | 120 |
| Msa1382300 | AT2G24260.2 | 69.697 | 66 | 19 | 1 | 261 | 326 | 35 | 99 | 3.14e-22 | 95.5 |
| Msa1382300 | AT5G58010.1 | 62.963 | 81 | 25 | 2 | 260 | 336 | 98 | 177 | 3.36e-22 | 96.7 |
| Msa1382300 | AT4G30980.1 | 71.212 | 66 | 18 | 1 | 261 | 326 | 130 | 194 | 6.85e-22 | 95.9 |
| Msa1382300 | AT4G30980.2 | 71.212 | 66 | 18 | 1 | 261 | 326 | 178 | 242 | 1.18e-21 | 96.3 |
| Msa1382300 | AT2G24260.1 | 69.697 | 66 | 19 | 1 | 261 | 326 | 138 | 202 | 1.40e-21 | 95.9 |
| Msa1382300 | AT2G42300.5 | 68.000 | 50 | 16 | 0 | 252 | 301 | 176 | 225 | 3.92e-17 | 80.5 |
| Msa1382300 | AT2G42300.3 | 68.000 | 50 | 16 | 0 | 252 | 301 | 176 | 225 | 3.92e-17 | 80.5 |
| Msa1382300 | AT2G42300.2 | 69.388 | 49 | 15 | 0 | 252 | 300 | 176 | 224 | 4.45e-17 | 80.5 |
| Msa1382300 | AT4G09180.1 | 42.056 | 107 | 49 | 3 | 241 | 334 | 153 | 259 | 1.41e-15 | 77.0 |
| Msa1382300 | AT1G35460.1 | 53.731 | 67 | 31 | 0 | 259 | 325 | 179 | 245 | 1.81e-15 | 76.6 |
| Msa1382300 | AT2G20180.7 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.90e-15 | 78.2 |
| Msa1382300 | AT2G20180.1 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.90e-15 | 78.2 |
| Msa1382300 | AT2G20180.5 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.90e-15 | 78.2 |
| Msa1382300 | AT2G20180.4 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.53e-15 | 78.2 |
| Msa1382300 | AT2G20180.6 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.53e-15 | 78.2 |
| Msa1382300 | AT2G20180.2 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.53e-15 | 78.2 |
| Msa1382300 | AT2G20180.3 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.53e-15 | 78.2 |
| Msa1382300 | AT2G42280.1 | 54.688 | 64 | 29 | 0 | 261 | 324 | 279 | 342 | 3.44e-15 | 77.0 |
| Msa1382300 | AT1G09530.3 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT1G09530.2 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT1G09530.5 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT1G09530.1 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT1G09530.4 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT1G09530.6 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.51e-15 | 77.4 |
| Msa1382300 | AT2G42280.3 | 56.061 | 66 | 27 | 1 | 261 | 324 | 279 | 344 | 6.08e-15 | 76.3 |
| Msa1382300 | AT1G51140.1 | 56.250 | 64 | 28 | 0 | 261 | 324 | 304 | 367 | 7.63e-15 | 76.3 |
| Msa1382300 | AT4G28790.1 | 35.156 | 128 | 64 | 3 | 211 | 333 | 229 | 342 | 3.76e-14 | 74.3 |
| Msa1382300 | AT2G20180.8 | 37.838 | 111 | 55 | 3 | 213 | 323 | 243 | 339 | 4.44e-14 | 73.6 |
| Msa1382300 | AT4G02590.3 | 64.179 | 67 | 23 | 1 | 260 | 326 | 82 | 147 | 7.58e-14 | 71.6 |
| Msa1382300 | AT4G02590.2 | 64.179 | 67 | 23 | 1 | 260 | 326 | 145 | 210 | 9.93e-14 | 72.0 |
| Msa1382300 | AT4G02590.1 | 64.179 | 67 | 23 | 1 | 260 | 326 | 145 | 210 | 9.93e-14 | 72.0 |
| Msa1382300 | AT4G28815.2 | 55.172 | 58 | 25 | 1 | 264 | 321 | 71 | 127 | 1.08e-13 | 70.9 |
| Msa1382300 | AT4G28800.1 | 35.338 | 133 | 68 | 6 | 264 | 389 | 252 | 373 | 1.08e-13 | 73.2 |
| Msa1382300 | AT1G03040.2 | 65.152 | 66 | 22 | 1 | 261 | 326 | 139 | 203 | 1.45e-13 | 71.6 |
| Msa1382300 | AT1G03040.1 | 65.152 | 66 | 22 | 1 | 261 | 326 | 144 | 208 | 1.68e-13 | 71.2 |
| Msa1382300 | AT1G03040.3 | 64.179 | 67 | 23 | 1 | 260 | 326 | 143 | 208 | 2.90e-13 | 70.9 |
| Msa1382300 | AT4G28815.1 | 55.172 | 58 | 25 | 1 | 264 | 321 | 147 | 203 | 3.79e-13 | 70.5 |
| Msa1382300 | AT4G28790.2 | 35.897 | 117 | 56 | 3 | 211 | 322 | 229 | 331 | 9.76e-13 | 69.3 |
| Msa1382300 | AT4G28800.2 | 52.542 | 59 | 27 | 1 | 264 | 322 | 264 | 321 | 3.45e-12 | 68.6 |
| Msa1382300 | AT4G00050.2 | 49.231 | 65 | 32 | 1 | 261 | 325 | 105 | 168 | 7.83e-12 | 66.2 |
| Msa1382300 | AT2G46970.1 | 41.250 | 80 | 41 | 2 | 259 | 333 | 216 | 294 | 1.20e-11 | 66.6 |
| Msa1382300 | AT2G46970.3 | 41.250 | 80 | 41 | 2 | 259 | 333 | 194 | 272 | 1.40e-11 | 66.2 |
| Msa1382300 | AT2G46970.2 | 41.250 | 80 | 41 | 2 | 259 | 333 | 185 | 263 | 1.41e-11 | 66.2 |
| Msa1382300 | AT4G00050.1 | 49.231 | 65 | 32 | 1 | 261 | 325 | 207 | 270 | 1.51e-11 | 66.2 |
| Msa1382300 | AT4G00050.3 | 49.231 | 65 | 32 | 1 | 261 | 325 | 207 | 270 | 1.68e-11 | 65.9 |
| Msa1382300 | AT4G33880.1 | 49.231 | 65 | 32 | 1 | 261 | 325 | 266 | 329 | 1.76e-11 | 65.9 |
| Msa1382300 | AT2G43140.2 | 48.485 | 66 | 34 | 0 | 259 | 324 | 229 | 294 | 1.84e-11 | 65.1 |
| Msa1382300 | AT2G43140.1 | 48.485 | 66 | 34 | 0 | 259 | 324 | 132 | 197 | 3.84e-11 | 62.8 |
| Msa1382300 | AT4G36930.1 | 49.180 | 61 | 30 | 1 | 267 | 327 | 197 | 256 | 9.69e-11 | 63.5 |
Find 160 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACTACCTTTGTTGTTTA+TGG | 0.090730 | tig0020493:-103659 | Msa1382300:five_prime_UTR |
| CAATACAGCACTTGACAATT+TGG | 0.175917 | tig0020493:-100239 | Msa1382300:CDS |
| TACTACCCAATTGGTGAAAT+TGG | 0.178979 | tig0020493:-103635 | Msa1382300:five_prime_UTR |
| TTTCCTGATTGTTCAACTTT+TGG | 0.201081 | tig0020493:+101700 | None:intergenic |
| ATCTTATAACCCTCTTGTTT+TGG | 0.236824 | tig0020493:-102533 | Msa1382300:CDS |
| GTACTTGTATTTGATTCTTT+TGG | 0.244214 | tig0020493:-103527 | Msa1382300:five_prime_UTR |
| TTGAGTCAAGCTCATACTTT+TGG | 0.246530 | tig0020493:-102601 | Msa1382300:CDS |
| ATCCCATTCCATAAAAGTTT+TGG | 0.257326 | tig0020493:+100269 | None:intergenic |
| TATTAGTTCTGTGTCAAATA+TGG | 0.262900 | tig0020493:-102713 | Msa1382300:CDS |
| AAGATCTTCACTTACATCTT+TGG | 0.264618 | tig0020493:+100827 | None:intergenic |
| TTCTTCTCTTATTAGATAAC+TGG | 0.273700 | tig0020493:-101247 | Msa1382300:intron |
| TCAGAAATGGTTGGTTCCTT+TGG | 0.277793 | tig0020493:-102415 | Msa1382300:CDS |
| GCTTAGAAACAAACCTTGTT+TGG | 0.285521 | tig0020493:+102172 | None:intergenic |
| ATCCAAAGGGGTCAAATTAA+TGG | 0.316200 | tig0020493:-102304 | Msa1382300:CDS |
| TTTAATTAATACCTAACTAT+TGG | 0.316951 | tig0020493:-99689 | Msa1382300:three_prime_UTR |
| TTGCTTCAAGAACTTGTTCC+AGG | 0.318899 | tig0020493:-101433 | Msa1382300:CDS |
| CAAGTTTCCTCAGTCATTGC+AGG | 0.330648 | tig0020493:-103557 | Msa1382300:five_prime_UTR |
| GAAATTATGTATAGAGTTGC+AGG | 0.336424 | tig0020493:-99473 | Msa1382300:three_prime_UTR |
| TTGTGTTCAAAATTTGTGTT+TGG | 0.337717 | tig0020493:-99440 | Msa1382300:three_prime_UTR |
| CAAATTGTCAAGTGCTGTAT+TGG | 0.339868 | tig0020493:+100240 | None:intergenic |
| CTTGTTCAATACTCAAATCT+TGG | 0.340230 | tig0020493:-102481 | Msa1382300:CDS |
| GCAGCAGCAGCATCATTTCA+TGG | 0.345728 | tig0020493:-102656 | Msa1382300:CDS |
| AAATGCATATAAATGATTAA+AGG | 0.347202 | tig0020493:+102925 | None:intergenic |
| CACCATTAATTTGACCCCTT+TGG | 0.347434 | tig0020493:+102302 | None:intergenic |
| CAAAATTTGTGTTTGGGGTT+AGG | 0.347483 | tig0020493:-99433 | Msa1382300:three_prime_UTR |
| ATTCCCAAACGCAAGTTTCC+AGG | 0.357553 | tig0020493:-100453 | Msa1382300:CDS |
| AGAGACATAGACATAGAAAA+AGG | 0.359398 | tig0020493:-102842 | Msa1382300:five_prime_UTR |
| AGAGTTATATTAAGATTAAG+AGG | 0.362493 | tig0020493:+103460 | None:intergenic |
| CTCCAGTCACGCTTAGGACT+TGG | 0.365208 | tig0020493:-100515 | Msa1382300:CDS |
| CTTGAGCCAATTGCTGAGTC+AGG | 0.372677 | tig0020493:-102902 | Msa1382300:five_prime_UTR |
| AATTCGAAGCGCCAATAGTT+AGG | 0.373908 | tig0020493:+99678 | None:intergenic |
| TGCAAGACTGTGGCTGTTTG+TGG | 0.374048 | tig0020493:+101600 | None:intergenic |
| AATGCATATAAATGATTAAA+GGG | 0.377617 | tig0020493:+102926 | None:intergenic |
| TCCTTTGGCCAACATGGGTC+AGG | 0.379373 | tig0020493:-102400 | Msa1382300:CDS |
| AGTTAAATTGTGCAGTCAAC+AGG | 0.381342 | tig0020493:+99771 | None:intergenic |
| TGGGCTCTAAACCTTTGAAT+TGG | 0.383247 | tig0020493:-99246 | Msa1382300:three_prime_UTR |
| ATTTCATGGCTTCTTCAGCT+TGG | 0.391101 | tig0020493:-102642 | Msa1382300:CDS |
| TTCTTGTCCATCTTCAGAAA+TGG | 0.392622 | tig0020493:-102737 | Msa1382300:CDS |
| TTTCATGGCTTCTTCAGCTT+GGG | 0.397346 | tig0020493:-102641 | Msa1382300:CDS |
| TGTGTTCAAAATTTGTGTTT+GGG | 0.398180 | tig0020493:-99439 | Msa1382300:three_prime_UTR |
| TACCCTGGAAACTTGCGTTT+GGG | 0.399150 | tig0020493:+100450 | None:intergenic |
| GGAATCGGTGGATTTGTTCC+TGG | 0.401252 | tig0020493:-100494 | Msa1382300:CDS |
| AAGTGGAAGTTTCTCAGAAA+TGG | 0.401403 | tig0020493:-102428 | Msa1382300:CDS |
| AATACAGCACTTGACAATTT+GGG | 0.404050 | tig0020493:-100238 | Msa1382300:CDS |
| CTGCAATGACTGAGGAAACT+TGG | 0.404304 | tig0020493:+103558 | None:intergenic |
| TCTACATCAAAGTTCAGTTC+CGG | 0.405761 | tig0020493:+100861 | None:intergenic |
| CTACATCAAAGTTCAGTTCC+GGG | 0.407748 | tig0020493:+100862 | None:intergenic |
| TATGTACATGCAGAATGCTT+TGG | 0.415983 | tig0020493:-100302 | Msa1382300:intron |
| TATCAATAGTTATAAGAAGA+AGG | 0.423090 | tig0020493:+103416 | None:intergenic |
| TTGTTAGATTCAATATCAAT+TGG | 0.426359 | tig0020493:-99638 | Msa1382300:three_prime_UTR |
| AAATTGTCAAGTGCTGTATT+GGG | 0.430882 | tig0020493:+100241 | None:intergenic |
| TTACCCTGGAAACTTGCGTT+TGG | 0.431578 | tig0020493:+100449 | None:intergenic |
| TTTGGCCAACATGGGTCAGG+TGG | 0.434581 | tig0020493:-102397 | Msa1382300:CDS |
| TGGCTCAAGAGATATCTTGC+AGG | 0.441362 | tig0020493:+102970 | None:intergenic |
| AAGGGTATTTATTGATATGA+AGG | 0.443214 | tig0020493:-99554 | Msa1382300:three_prime_UTR |
| GACTGTGGACAAAGGAGAAA+AGG | 0.443873 | tig0020493:-103326 | Msa1382300:five_prime_UTR |
| AACAATCCTGACTCAGCAAT+TGG | 0.444131 | tig0020493:+102896 | None:intergenic |
| TTCCAAGTCCTAAGCGTGAC+TGG | 0.444135 | tig0020493:+100513 | None:intergenic |
| ATGTATAGAGTTGCAGGACT+TGG | 0.446164 | tig0020493:-99467 | Msa1382300:three_prime_UTR |
| ATCGCTACCTTGTTGCATCC+TGG | 0.450261 | tig0020493:+101415 | None:intergenic |
| GTTGGTTCCTTTGGCCAACA+TGG | 0.452089 | tig0020493:-102406 | Msa1382300:CDS |
| CAGCCACAGTCTTGCAGAAA+GGG | 0.452630 | tig0020493:-101593 | Msa1382300:intron |
| GAACATGTAGCTAACACATC+AGG | 0.456379 | tig0020493:-102373 | Msa1382300:CDS |
| ACAGGATCTGCACCTGGTAG+TGG | 0.456742 | tig0020493:-102238 | Msa1382300:CDS |
| CTAATATCCATTTCTGAAGA+TGG | 0.462754 | tig0020493:+102730 | None:intergenic |
| AAACCAAAAGTTGAACAATC+AGG | 0.463056 | tig0020493:-101703 | Msa1382300:CDS |
| ATCCACAAGATTCCTTCCTA+TGG | 0.466206 | tig0020493:-102451 | Msa1382300:CDS |
| GTTTCTACAACAGAAGACTT+TGG | 0.470200 | tig0020493:-99800 | Msa1382300:three_prime_UTR |
| TGTGCAATCACTGCAGCAAC+AGG | 0.471611 | tig0020493:-101191 | Msa1382300:CDS |
| TATTCAACACACTATAACTC+TGG | 0.473092 | tig0020493:+99832 | None:intergenic |
| AAAGTTCAGTTCCGGGTTCA+CGG | 0.473106 | tig0020493:+100869 | None:intergenic |
| TAGATTCTCCAGTCACGCTT+AGG | 0.473536 | tig0020493:-100521 | Msa1382300:CDS |
| TTCTTTCTTGAATTAAGAGA+TGG | 0.473587 | tig0020493:-102812 | Msa1382300:exon |
| ATTCACGAGGATGGAGGTAC+AGG | 0.478235 | tig0020493:-102256 | Msa1382300:CDS |
| TGGAAACTTGCGTTTGGGAA+TGG | 0.479393 | tig0020493:+100455 | None:intergenic |
| GTTTATGGTTACTACCCAAT+TGG | 0.482901 | tig0020493:-103644 | Msa1382300:five_prime_UTR |
| TTATAATGCTGTGACGGAAT+TGG | 0.483604 | tig0020493:+102346 | None:intergenic |
| CGCTTAGGACTTGGAATCGG+TGG | 0.488486 | tig0020493:-100506 | Msa1382300:CDS |
| ACAGTTCCCTCCTTTGCCTC+AGG | 0.492804 | tig0020493:-100399 | Msa1382300:intron |
| ATCACTGCAGCAACAGGTTG+AGG | 0.493756 | tig0020493:-101185 | Msa1382300:intron |
| CGCAAGTTTCCAGGGTAACA+TGG | 0.498356 | tig0020493:-100444 | Msa1382300:CDS |
| TATAATCACATCAAGGATGC+TGG | 0.503047 | tig0020493:-102328 | Msa1382300:CDS |
| AAAAGATTAGCGAGCGAATG+AGG | 0.508531 | tig0020493:-101456 | Msa1382300:CDS |
| GAAACTTGCCACCGTGAACC+CGG | 0.509079 | tig0020493:-100880 | Msa1382300:CDS |
| CAAGGATGCTGGAATCCAAA+GGG | 0.509335 | tig0020493:-102317 | Msa1382300:CDS |
| GTTCAATACTCAAATCTTGG+AGG | 0.510892 | tig0020493:-102478 | Msa1382300:CDS |
| AAGATTCCTTCCTATGGAAG+TGG | 0.511892 | tig0020493:-102445 | Msa1382300:CDS |
| TGAGAAACTTCCACTTCCAT+AGG | 0.519524 | tig0020493:+102435 | None:intergenic |
| CGTCTGAGTGAATTATCGAT+TGG | 0.519936 | tig0020493:-99209 | None:intergenic |
| TTTCTTCTACTTCCACTACC+AGG | 0.520640 | tig0020493:+102226 | None:intergenic |
| ATTTATTGATATGAAGGGCA+TGG | 0.524106 | tig0020493:-99548 | Msa1382300:three_prime_UTR |
| ACAGCCACAGTCTTGCAGAA+AGG | 0.526933 | tig0020493:-101594 | Msa1382300:CDS |
| AACTTGGAAGTGAAAGGGAC+AGG | 0.526946 | tig0020493:+103574 | None:intergenic |
| GGATGAGAGGAGCTTATACC+AGG | 0.529199 | tig0020493:+100476 | None:intergenic |
| ATCATTAAGAACAAGTTGCA+AGG | 0.531774 | tig0020493:-99573 | Msa1382300:three_prime_UTR |
| GGAAGTTTCTCAGAAATGGT+TGG | 0.538496 | tig0020493:-102424 | Msa1382300:CDS |
| TTGGTTCCTTTGGCCAACAT+GGG | 0.538891 | tig0020493:-102405 | Msa1382300:CDS |
| GATTAGAATGCTGAGGGTGA+TGG | 0.542326 | tig0020493:-101778 | Msa1382300:intron |
| TCTTTAGAAGCATCTCCACT+TGG | 0.543899 | tig0020493:+101658 | None:intergenic |
| ATGCTCTTAACAAGACTGAA+AGG | 0.547541 | tig0020493:-103209 | Msa1382300:five_prime_UTR |
| AGTTTCCAGGGTAACATGGC+TGG | 0.548496 | tig0020493:-100440 | Msa1382300:CDS |
| TGAGGAAACTTGGAAGTGAA+AGG | 0.550184 | tig0020493:+103568 | None:intergenic |
| TCTTTCTTGAATTAAGAGAT+GGG | 0.551193 | tig0020493:-102811 | Msa1382300:exon |
| TTGGCCAACATGGGTCAGGT+GGG | 0.552278 | tig0020493:-102396 | Msa1382300:CDS |
| TTCTTCTTTCAGTCCAAACA+AGG | 0.563605 | tig0020493:-102185 | Msa1382300:intron |
| AGGGTATTTATTGATATGAA+GGG | 0.566466 | tig0020493:-99553 | Msa1382300:three_prime_UTR |
| ACCTGACCCATGTTGGCCAA+AGG | 0.569057 | tig0020493:+102399 | None:intergenic |
| TTCCCAAACGCAAGTTTCCA+GGG | 0.570083 | tig0020493:-100452 | Msa1382300:CDS |
| TCTCCGAGGAAGATTTCTGA+TGG | 0.571010 | tig0020493:-101745 | Msa1382300:CDS |
| TTTCTTGCTTGTATCAGAGA+GGG | 0.571979 | tig0020493:-103178 | Msa1382300:five_prime_UTR |
| GAGGAAACTTGGAAGTGAAA+GGG | 0.572419 | tig0020493:+103569 | None:intergenic |
| GTGTTCAAAATTTGTGTTTG+GGG | 0.576966 | tig0020493:-99438 | Msa1382300:three_prime_UTR |
| TGGTGAACAATCTCAGATTG+AGG | 0.578059 | tig0020493:-102284 | Msa1382300:CDS |
| GGGAACTGTGTTGATGAACT+AGG | 0.579147 | tig0020493:+100413 | None:intergenic |
| TCACGCTTAGGACTTGGAAT+CGG | 0.580584 | tig0020493:-100509 | Msa1382300:CDS |
| GCATGCCAGCCATGTTACCC+TGG | 0.580745 | tig0020493:+100435 | None:intergenic |
| ACTGTGGACAAAGGAGAAAA+GGG | 0.582202 | tig0020493:-103325 | Msa1382300:five_prime_UTR |
| TAAACAAGGAACAAATAACT+TGG | 0.582620 | tig0020493:+102995 | None:intergenic |
| TCTATACATAATTTCACAGA+AGG | 0.586134 | tig0020493:+99481 | None:intergenic |
| TCAAGGATGCTGGAATCCAA+AGG | 0.589904 | tig0020493:-102318 | Msa1382300:CDS |
| AATGTTGAAAGTGAAAGTGT+TGG | 0.590146 | tig0020493:+103484 | None:intergenic |
| CCTTGATTCTCCAAAACAAG+AGG | 0.592951 | tig0020493:+102523 | None:intergenic |
| AAACTTCCACTTCCATAGGA+AGG | 0.598638 | tig0020493:+102439 | None:intergenic |
| GAACCATCAGAAATCTTCCT+CGG | 0.600200 | tig0020493:+101742 | None:intergenic |
| GCTTGACTCAATGAAACAAG+TGG | 0.600555 | tig0020493:+102613 | None:intergenic |
| TTCCATAGGAAGGAATCTTG+TGG | 0.606199 | tig0020493:+102449 | None:intergenic |
| GGGTGGTGAGGAAAATGCAA+TGG | 0.606665 | tig0020493:-102791 | Msa1382300:CDS |
| CTTGACAATTTGGGACCCAA+TGG | 0.608459 | tig0020493:-100229 | Msa1382300:intron |
| TGGCCAACATGGGTCAGGTG+GGG | 0.608930 | tig0020493:-102395 | Msa1382300:CDS |
| GAGGACTCTATTCACGAGGA+TGG | 0.609630 | tig0020493:-102265 | Msa1382300:CDS |
| TGCGTTTGGGAATGGATGAG+AGG | 0.610999 | tig0020493:+100463 | None:intergenic |
| CTTGATTCTCCAAAACAAGA+GGG | 0.612056 | tig0020493:+102524 | None:intergenic |
| AGTCTTCTGTTGTAGAAACA+AGG | 0.612748 | tig0020493:+99804 | None:intergenic |
| ACAGCATTATAATCACATCA+AGG | 0.612775 | tig0020493:-102335 | Msa1382300:CDS |
| TCATTAAGAACAAGTTGCAA+GGG | 0.618041 | tig0020493:-99572 | Msa1382300:three_prime_UTR |
| GAGGTTGGATTAGAATGCTG+AGG | 0.619937 | tig0020493:-101785 | Msa1382300:intron |
| AACTGAACTTTGATGTAGAG+CGG | 0.623663 | tig0020493:-100857 | Msa1382300:CDS |
| GTTCCCCACCTGACCCATGT+TGG | 0.625912 | tig0020493:+102392 | None:intergenic |
| TAAGTTTGTTGTGTGGACTG+TGG | 0.626396 | tig0020493:-103341 | Msa1382300:five_prime_UTR |
| GAATTAAGAGATGGGTGGTG+AGG | 0.626693 | tig0020493:-102803 | Msa1382300:exon |
| ATATCTTGCAGGACTAAACA+AGG | 0.628784 | tig0020493:+102981 | None:intergenic |
| AACATGTAGCTAACACATCA+GGG | 0.630115 | tig0020493:-102372 | Msa1382300:CDS |
| GGAGGTACAGGATCTGCACC+TGG | 0.632655 | tig0020493:-102244 | Msa1382300:CDS |
| GCTAAAGACAACTCTCCAAG+TGG | 0.635670 | tig0020493:-101673 | Msa1382300:CDS |
| GTACCCTTTCTGCAAGACTG+TGG | 0.636291 | tig0020493:+101590 | None:intergenic |
| TCAAAATCCTGCAATGACTG+AGG | 0.636610 | tig0020493:+103550 | None:intergenic |
| AATGCAATGGAGTTTCAACA+TGG | 0.644756 | tig0020493:-102778 | Msa1382300:CDS |
| GACTCTATTCACGAGGATGG+AGG | 0.650722 | tig0020493:-102262 | Msa1382300:CDS |
| AGGTTGGATTAGAATGCTGA+GGG | 0.650823 | tig0020493:-101784 | Msa1382300:intron |
| GAAGGGCATGGAATTACATG+AGG | 0.652992 | tig0020493:-99536 | Msa1382300:three_prime_UTR |
| ATTCATGTGAGAGCTAGAAG+AGG | 0.658128 | tig0020493:-101628 | Msa1382300:CDS |
| TTCTTGAATTAAGAGATGGG+TGG | 0.661303 | tig0020493:-102808 | Msa1382300:exon |
| ATGTGATTATAATGCTGTGA+CGG | 0.663370 | tig0020493:+102340 | None:intergenic |
| GTTGTGTGGACTGTGGACAA+AGG | 0.667680 | tig0020493:-103334 | Msa1382300:five_prime_UTR |
| GTAGTAACCATAAACAACAA+AGG | 0.668529 | tig0020493:+103652 | None:intergenic |
| ACTTGTTCCAGGATGCAACA+AGG | 0.687844 | tig0020493:-101422 | Msa1382300:intron |
| GATTGAGGACTCTATTCACG+AGG | 0.712793 | tig0020493:-102269 | Msa1382300:CDS |
| AAGGATGCTGGAATCCAAAG+GGG | 0.724973 | tig0020493:-102316 | Msa1382300:CDS |
| ATGGAGTGAAAGATTCTCCG+AGG | 0.725092 | tig0020493:-101759 | Msa1382300:CDS |
| GTTCAGTTCCGGGTTCACGG+TGG | 0.752023 | tig0020493:+100872 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGCATATAAATGATTAAA+GGG | + | tig0020493:100044-100063 | None:intergenic | 15.0% |
| !! | AAATGCATATAAATGATTAA+AGG | + | tig0020493:100045-100064 | None:intergenic | 15.0% |
| !! | TTTAATTAATACCTAACTAT+TGG | - | tig0020493:103278-103297 | Msa1382300:five_prime_UTR | 15.0% |
| !! | AGAGTTATATTAAGATTAAG+AGG | + | tig0020493:99510-99529 | None:intergenic | 20.0% |
| !! | TATCAATAGTTATAAGAAGA+AGG | + | tig0020493:99554-99573 | None:intergenic | 20.0% |
| !!! | TATTCTATTTTATGAGAAGA+AGG | - | tig0020493:99894-99913 | Msa1382300:intron | 20.0% |
| !!! | ATTCTATTTTATGAGAAGAA+GGG | - | tig0020493:99895-99914 | Msa1382300:intron | 20.0% |
| !!! | TTAGTTGTTAATTTGTTAGA+GGG | - | tig0020493:100878-100897 | Msa1382300:CDS | 20.0% |
| !! | ATATAAGACATTTCATTCAT+TGG | + | tig0020493:101020-101039 | None:intergenic | 20.0% |
| !! | TATATCAATGAATCTCATAT+AGG | - | tig0020493:101090-101109 | Msa1382300:intron | 20.0% |
| !!! | ATTTAATTGTCTTGTTTATG+AGG | - | tig0020493:101122-101141 | Msa1382300:intron | 20.0% |
| !!! | ATTTGGACATATTTAAGATT+TGG | + | tig0020493:102276-102295 | None:intergenic | 20.0% |
| !! | AATCATAATTGTGTATTAAC+TGG | + | tig0020493:102403-102422 | None:intergenic | 20.0% |
| !! | ACTAACAAAAAATACATTCA+AGG | - | tig0020493:102931-102950 | Msa1382300:five_prime_UTR | 20.0% |
| !! | AACAATGAAAAAAGAGTAAA+TGG | + | tig0020493:103057-103076 | None:intergenic | 20.0% |
| !! | ACTGAAGTTAAAAAAAATAG+AGG | - | tig0020493:103216-103235 | Msa1382300:five_prime_UTR | 20.0% |
| !! | CTGAAGTTAAAAAAAATAGA+GGG | - | tig0020493:103217-103236 | Msa1382300:five_prime_UTR | 20.0% |
| !!! | AAAGGTTTTATTAGTTGTAT+AGG | - | tig0020493:103254-103273 | Msa1382300:five_prime_UTR | 20.0% |
| !! | TTGTTAGATTCAATATCAAT+TGG | - | tig0020493:103329-103348 | Msa1382300:five_prime_UTR | 20.0% |
| !!! | TGATAATTTTACCAATTCAA+AGG | + | tig0020493:103735-103754 | None:intergenic | 20.0% |
| !!! | TATACTACCTTTGTTGTTTA+TGG | - | tig0020493:99308-99327 | Msa1382300:three_prime_UTR | 25.0% |
| ! | AAAAACCAATTTCACCAATT+GGG | + | tig0020493:99340-99359 | None:intergenic | 25.0% |
| ! | TAAAAACCAATTTCACCAAT+TGG | + | tig0020493:99341-99360 | None:intergenic | 25.0% |
| !! | GTACTTGTATTTGATTCTTT+TGG | - | tig0020493:99440-99459 | Msa1382300:three_prime_UTR | 25.0% |
| !!! | AGATTTTTAAGTTTGTTGTG+TGG | - | tig0020493:99619-99638 | Msa1382300:three_prime_UTR | 25.0% |
| !!! | TTAGATTTTGATTTGATCCT+AGG | - | tig0020493:99829-99848 | Msa1382300:exon | 25.0% |
| !!! | TAGATTTTGATTTGATCCTA+GGG | - | tig0020493:99830-99849 | Msa1382300:exon | 25.0% |
| ! | TAAACAAGGAACAAATAACT+TGG | + | tig0020493:99975-99994 | None:intergenic | 25.0% |
| !!! | AAGTGAATTTTGACTAAGTT+TGG | + | tig0020493:100020-100039 | None:intergenic | 25.0% |
| ! | TTCTTTCTTGAATTAAGAGA+TGG | - | tig0020493:100155-100174 | Msa1382300:intron | 25.0% |
| ! | TCTTTCTTGAATTAAGAGAT+GGG | - | tig0020493:100156-100175 | Msa1382300:intron | 25.0% |
| !!! | TATTAGTTCTGTGTCAAATA+TGG | - | tig0020493:100254-100273 | Msa1382300:CDS | 25.0% |
| ! | TATATCAATGAATCTTATGC+AGG | - | tig0020493:100833-100852 | Msa1382300:intron | 25.0% |
| !!! | GTTAGTTGTTAATTTGTTAG+AGG | - | tig0020493:100877-100896 | Msa1382300:CDS | 25.0% |
| ! | AAATGTCTTATATATGAGCT+TGG | - | tig0020493:101027-101046 | Msa1382300:intron | 25.0% |
| ! | AAAGAAATGCCTTATATATG+AGG | - | tig0020493:101163-101182 | Msa1382300:intron | 25.0% |
| !! | AACAGCTTTATAGTATAAGA+TGG | + | tig0020493:101419-101438 | None:intergenic | 25.0% |
| ! | GTTAAGATGATTGTGTTAAA+TGG | - | tig0020493:101578-101597 | Msa1382300:intron | 25.0% |
| ! | GTCGTAACTTATAACTTATT+TGG | - | tig0020493:101614-101633 | Msa1382300:CDS | 25.0% |
| ! | TTCTTCTCTTATTAGATAAC+TGG | - | tig0020493:101720-101739 | Msa1382300:CDS | 25.0% |
| !! | TTGATACTTTAAAGATTGCA+AGG | + | tig0020493:101821-101840 | None:intergenic | 25.0% |
| !! | GCTTCAATTCCATTATATTT+TGG | - | tig0020493:102014-102033 | Msa1382300:intron | 25.0% |
| !! | TTCCAAAACTTTTATGGAAT+GGG | - | tig0020493:102696-102715 | Msa1382300:CDS | 25.0% |
| !! | ATCTTTTGCTAGTTATTAAG+CGG | - | tig0020493:102877-102896 | Msa1382300:five_prime_UTR | 25.0% |
| !! | ATTTTTATCCTTGAATGTGT+CGG | + | tig0020493:103032-103051 | None:intergenic | 25.0% |
| ! | AATTTATTTCCATGTTGAAC+AGG | - | tig0020493:103102-103121 | Msa1382300:five_prime_UTR | 25.0% |
| ! | ATTTATTTCCATGTTGAACA+GGG | - | tig0020493:103103-103122 | Msa1382300:five_prime_UTR | 25.0% |
| ! | AAAAAAATAGAGGGAGAAAA+AGG | - | tig0020493:103226-103245 | Msa1382300:five_prime_UTR | 25.0% |
| !!! | AAGGGTATTTATTGATATGA+AGG | - | tig0020493:103413-103432 | Msa1382300:five_prime_UTR | 25.0% |
| !! | AGGGTATTTATTGATATGAA+GGG | - | tig0020493:103414-103433 | Msa1382300:five_prime_UTR | 25.0% |
| ! | TCTATACATAATTTCACAGA+AGG | + | tig0020493:103489-103508 | None:intergenic | 25.0% |
| ! | TTGTGTTCAAAATTTGTGTT+TGG | - | tig0020493:103527-103546 | Msa1382300:five_prime_UTR | 25.0% |
| ! | TGTGTTCAAAATTTGTGTTT+GGG | - | tig0020493:103528-103547 | Msa1382300:five_prime_UTR | 25.0% |
| !!! | TGATGTGTGCATTTTTTTTA+AGG | - | tig0020493:103557-103576 | Msa1382300:five_prime_UTR | 25.0% |
| !!! | GATGTGTGCATTTTTTTTAA+GGG | - | tig0020493:103558-103577 | Msa1382300:five_prime_UTR | 25.0% |
| GTAGTAACCATAAACAACAA+AGG | + | tig0020493:99318-99337 | None:intergenic | 30.0% | |
| !! | TTTTGGTCTTTGTTTCTTCT+TGG | - | tig0020493:99457-99476 | Msa1382300:three_prime_UTR | 30.0% |
| ! | AATGTTGAAAGTGAAAGTGT+TGG | + | tig0020493:99486-99505 | None:intergenic | 30.0% |
| AGAGACATAGACATAGAAAA+AGG | - | tig0020493:100125-100144 | Msa1382300:intron | 30.0% | |
| ! | CTAATATCCATTTCTGAAGA+TGG | + | tig0020493:100240-100259 | None:intergenic | 30.0% |
| !! | ATCTTATAACCCTCTTGTTT+TGG | - | tig0020493:100434-100453 | Msa1382300:CDS | 30.0% |
| CTTGTTCAATACTCAAATCT+TGG | - | tig0020493:100486-100505 | Msa1382300:CDS | 30.0% | |
| ATGTGATTATAATGCTGTGA+CGG | + | tig0020493:100630-100649 | None:intergenic | 30.0% | |
| ACAGCATTATAATCACATCA+AGG | - | tig0020493:100632-100651 | Msa1382300:intron | 30.0% | |
| !! | GTTTGTTTCTAAGCTAAGTT+TGG | - | tig0020493:100804-100823 | Msa1382300:intron | 30.0% |
| TTGTATAGGACTTGTATTGT+TGG | - | tig0020493:100964-100983 | Msa1382300:intron | 30.0% | |
| !!! | GTTGGTTTGTTTTGTTTATG+AGG | - | tig0020493:100982-101001 | Msa1382300:intron | 30.0% |
| ! | TTGGATTAGATCAAACTTTG+TGG | - | tig0020493:101046-101065 | Msa1382300:intron | 30.0% |
| AAATGCCTTATATATGAGGT+TGG | - | tig0020493:101167-101186 | Msa1382300:intron | 30.0% | |
| CTAATCCAACCTCATATATA+AGG | + | tig0020493:101175-101194 | None:intergenic | 30.0% | |
| AAACCAAAAGTTGAACAATC+AGG | - | tig0020493:101264-101283 | Msa1382300:intron | 30.0% | |
| ! | TTTCCTGATTGTTCAACTTT+TGG | + | tig0020493:101270-101289 | None:intergenic | 30.0% |
| ! | TTTATAGTATAAGATGGTGG+TGG | + | tig0020493:101413-101432 | None:intergenic | 30.0% |
| ! | AGCTTTATAGTATAAGATGG+TGG | + | tig0020493:101416-101435 | None:intergenic | 30.0% |
| !!! | TTCCTTTTTTTGATTTCCCT+TGG | + | tig0020493:101904-101923 | None:intergenic | 30.0% |
| CCAGGAAAACCAAAATATAA+TGG | + | tig0020493:102026-102045 | None:intergenic | 30.0% | |
| !!! | CCATTATATTTTGGTTTTCC+TGG | - | tig0020493:102023-102042 | Msa1382300:intron | 30.0% |
| TCTTTATACGATAAATAGCC+AGG | + | tig0020493:102044-102063 | None:intergenic | 30.0% | |
| AAGATCTTCACTTACATCTT+TGG | + | tig0020493:102143-102162 | None:intergenic | 30.0% | |
| ATATGTCCAAATATCAGTCA+TGG | - | tig0020493:102284-102303 | Msa1382300:CDS | 30.0% | |
| ! | ATCTTTACTCTTTTTACCTG+AGG | + | tig0020493:102587-102606 | None:intergenic | 30.0% |
| !!! | CATAAAAGTTTTGGAAGTCA+TGG | + | tig0020493:102692-102711 | None:intergenic | 30.0% |
| ! | CATGACTTCCAAAACTTTTA+TGG | - | tig0020493:102690-102709 | Msa1382300:CDS | 30.0% |
| ! | CTTCCAAAACTTTTATGGAA+TGG | - | tig0020493:102695-102714 | Msa1382300:CDS | 30.0% |
| ! | ATCCCATTCCATAAAAGTTT+TGG | + | tig0020493:102701-102720 | None:intergenic | 30.0% |
| ! | AAATTGTCAAGTGCTGTATT+GGG | + | tig0020493:102729-102748 | None:intergenic | 30.0% |
| AATACAGCACTTGACAATTT+GGG | - | tig0020493:102729-102748 | Msa1382300:CDS | 30.0% | |
| AGACAATGTTACTACAGTAT+CGG | - | tig0020493:102821-102840 | Msa1382300:five_prime_UTR | 30.0% | |
| ACTAGCAAAAGATACACTTA+AGG | + | tig0020493:102870-102889 | None:intergenic | 30.0% | |
| TATTCAACACACTATAACTC+TGG | + | tig0020493:103138-103157 | None:intergenic | 30.0% | |
| AGGGAGAAAAAGGAAAATAA+AGG | - | tig0020493:103236-103255 | Msa1382300:five_prime_UTR | 30.0% | |
| ATCATTAAGAACAAGTTGCA+AGG | - | tig0020493:103394-103413 | Msa1382300:five_prime_UTR | 30.0% | |
| TCATTAAGAACAAGTTGCAA+GGG | - | tig0020493:103395-103414 | Msa1382300:five_prime_UTR | 30.0% | |
| ATTTATTGATATGAAGGGCA+TGG | - | tig0020493:103419-103438 | Msa1382300:five_prime_UTR | 30.0% | |
| GAAATTATGTATAGAGTTGC+AGG | - | tig0020493:103494-103513 | Msa1382300:five_prime_UTR | 30.0% | |
| GTGTTCAAAATTTGTGTTTG+GGG | - | tig0020493:103529-103548 | Msa1382300:five_prime_UTR | 30.0% | |
| !!! | GCATTTTTTTTAAGGGTTTC+TGG | - | tig0020493:103565-103584 | Msa1382300:five_prime_UTR | 30.0% |
| !!! | AAGTGCTGCTTAGAATTTTT+GGG | - | tig0020493:103702-103721 | Msa1382300:five_prime_UTR | 30.0% |
| GTTTATGGTTACTACCCAAT+TGG | - | tig0020493:99323-99342 | Msa1382300:three_prime_UTR | 35.0% | |
| TACTACCCAATTGGTGAAAT+TGG | - | tig0020493:99332-99351 | Msa1382300:three_prime_UTR | 35.0% | |
| ATGCTCTTAACAAGACTGAA+AGG | - | tig0020493:99758-99777 | Msa1382300:three_prime_UTR | 35.0% | |
| ! | TTTTCTTGCTTGTATCAGAG+AGG | - | tig0020493:99788-99807 | Msa1382300:three_prime_UTR | 35.0% |
| TTTCTTGCTTGTATCAGAGA+GGG | - | tig0020493:99789-99808 | Msa1382300:three_prime_UTR | 35.0% | |
| ! | TTTGATCCTAGGGTTTTTGA+AGG | - | tig0020493:99840-99859 | Msa1382300:exon | 35.0% |
| ATATCTTGCAGGACTAAACA+AGG | + | tig0020493:99989-100008 | None:intergenic | 35.0% | |
| TTCTTGAATTAAGAGATGGG+TGG | - | tig0020493:100159-100178 | Msa1382300:intron | 35.0% | |
| AATGCAATGGAGTTTCAACA+TGG | - | tig0020493:100189-100208 | Msa1382300:intron | 35.0% | |
| TTCTTGTCCATCTTCAGAAA+TGG | - | tig0020493:100230-100249 | Msa1382300:CDS | 35.0% | |
| ! | TTGAGTCAAGCTCATACTTT+TGG | - | tig0020493:100366-100385 | Msa1382300:intron | 35.0% |
| !! | TACTTTTGGAGGTTCTTCAA+TGG | - | tig0020493:100380-100399 | Msa1382300:intron | 35.0% |
| CTTGATTCTCCAAAACAAGA+GGG | + | tig0020493:100446-100465 | None:intergenic | 35.0% | |
| !!! | CTCTTGTTTTGGAGAATCAA+GGG | - | tig0020493:100445-100464 | Msa1382300:CDS | 35.0% |
| GTTCAATACTCAAATCTTGG+AGG | - | tig0020493:100489-100508 | Msa1382300:CDS | 35.0% | |
| AAGTGGAAGTTTCTCAGAAA+TGG | - | tig0020493:100539-100558 | Msa1382300:intron | 35.0% | |
| AACATGTAGCTAACACATCA+GGG | - | tig0020493:100595-100614 | Msa1382300:intron | 35.0% | |
| ! | TTATAATGCTGTGACGGAAT+TGG | + | tig0020493:100624-100643 | None:intergenic | 35.0% |
| TATAATCACATCAAGGATGC+TGG | - | tig0020493:100639-100658 | Msa1382300:intron | 35.0% | |
| ATCCAAAGGGGTCAAATTAA+TGG | - | tig0020493:100663-100682 | Msa1382300:intron | 35.0% | |
| AGTGGAAGTAGAAGAAAAAG+AGG | - | tig0020493:100747-100766 | Msa1382300:intron | 35.0% | |
| TTCTTCTTTCAGTCCAAACA+AGG | - | tig0020493:100782-100801 | Msa1382300:intron | 35.0% | |
| GCTTAGAAACAAACCTTGTT+TGG | + | tig0020493:100798-100817 | None:intergenic | 35.0% | |
| CCTGATTTATCGAACTTCAT+CGG | - | tig0020493:100937-100956 | Msa1382300:intron | 35.0% | |
| !!! | ACTTCTGTTTTTGCTTTTGC+AGG | - | tig0020493:101479-101498 | Msa1382300:intron | 35.0% |
| CACCAAGGGAAATCAAAAAA+AGG | - | tig0020493:101899-101918 | Msa1382300:intron | 35.0% | |
| TCTACATCAAAGTTCAGTTC+CGG | + | tig0020493:102109-102128 | None:intergenic | 35.0% | |
| AACTGAACTTTGATGTAGAG+CGG | - | tig0020493:102110-102129 | Msa1382300:intron | 35.0% | |
| ATCATACAGATTTGACTCCT+TGG | - | tig0020493:102164-102183 | Msa1382300:intron | 35.0% | |
| AAGTGAATAGTTCACTTCCA+AGG | + | tig0020493:102184-102203 | None:intergenic | 35.0% | |
| TGGAAGTGAACTATTCACTT+TGG | - | tig0020493:102184-102203 | Msa1382300:intron | 35.0% | |
| AAGTGAACTATTCACTTTGG+AGG | - | tig0020493:102187-102206 | Msa1382300:CDS | 35.0% | |
| AGTGAACTATTCACTTTGGA+GGG | - | tig0020493:102188-102207 | Msa1382300:CDS | 35.0% | |
| TAAGCATATCGTTACATCGA+TGG | + | tig0020493:102251-102270 | None:intergenic | 35.0% | |
| ATGAGACCATGACTGATATT+TGG | + | tig0020493:102293-102312 | None:intergenic | 35.0% | |
| AAATATCAGTCATGGTCTCA+TGG | - | tig0020493:102292-102311 | Msa1382300:CDS | 35.0% | |
| TATGTACATGCAGAATGCTT+TGG | - | tig0020493:102665-102684 | Msa1382300:CDS | 35.0% | |
| ! | CAAATTGTCAAGTGCTGTAT+TGG | + | tig0020493:102730-102749 | None:intergenic | 35.0% |
| CAATACAGCACTTGACAATT+TGG | - | tig0020493:102728-102747 | Msa1382300:CDS | 35.0% | |
| GATTCTGCCTATTTACCATT+GGG | + | tig0020493:102756-102775 | None:intergenic | 35.0% | |
| AGATTCTGCCTATTTACCAT+TGG | + | tig0020493:102757-102776 | None:intergenic | 35.0% | |
| AGTTATTAAGCGGCTAATAG+AGG | - | tig0020493:102887-102906 | Msa1382300:five_prime_UTR | 35.0% | |
| CAAATGTGTCTCTCATTAGT+CGG | + | tig0020493:102963-102982 | None:intergenic | 35.0% | |
| ACTAATGAGAGACACATTTG+AGG | - | tig0020493:102963-102982 | Msa1382300:five_prime_UTR | 35.0% | |
| AGTCTTCTGTTGTAGAAACA+AGG | + | tig0020493:103166-103185 | None:intergenic | 35.0% | |
| GTTTCTACAACAGAAGACTT+TGG | - | tig0020493:103167-103186 | Msa1382300:five_prime_UTR | 35.0% | |
| AGTTAAATTGTGCAGTCAAC+AGG | + | tig0020493:103199-103218 | None:intergenic | 35.0% | |
| ! | CAAAATTTGTGTTTGGGGTT+AGG | - | tig0020493:103534-103553 | Msa1382300:five_prime_UTR | 35.0% |
| !!! | CAAGTGCTGCTTAGAATTTT+TGG | - | tig0020493:103701-103720 | Msa1382300:five_prime_UTR | 35.0% |
| GAGGAAACTTGGAAGTGAAA+GGG | + | tig0020493:99401-99420 | None:intergenic | 40.0% | |
| TGAGGAAACTTGGAAGTGAA+AGG | + | tig0020493:99402-99421 | None:intergenic | 40.0% | |
| TCAAAATCCTGCAATGACTG+AGG | + | tig0020493:99420-99439 | None:intergenic | 40.0% | |
| !! | TAAGTTTGTTGTGTGGACTG+TGG | - | tig0020493:99626-99645 | Msa1382300:three_prime_UTR | 40.0% |
| ACTGTGGACAAAGGAGAAAA+GGG | - | tig0020493:99642-99661 | Msa1382300:three_prime_UTR | 40.0% | |
| TCTTCACCTTCAAAAACCCT+AGG | + | tig0020493:99849-99868 | None:intergenic | 40.0% | |
| !! | AGGGTTTTTGAAGGTGAAGA+AGG | - | tig0020493:99849-99868 | Msa1382300:intron | 40.0% |
| !! | GTTTTTGAAGGTGAAGAAGG+TGG | - | tig0020493:99852-99871 | Msa1382300:intron | 40.0% |
| AACAATCCTGACTCAGCAAT+TGG | + | tig0020493:100074-100093 | None:intergenic | 40.0% | |
| ATTTCATGGCTTCTTCAGCT+TGG | - | tig0020493:100325-100344 | Msa1382300:intron | 40.0% | |
| TTTCATGGCTTCTTCAGCTT+GGG | - | tig0020493:100326-100345 | Msa1382300:intron | 40.0% | |
| GCTTGACTCAATGAAACAAG+TGG | + | tig0020493:100357-100376 | None:intergenic | 40.0% | |
| ! | AGTCAAGCTCATACTTTTGG+AGG | - | tig0020493:100369-100388 | Msa1382300:intron | 40.0% |
| CCTTGATTCTCCAAAACAAG+AGG | + | tig0020493:100447-100466 | None:intergenic | 40.0% | |
| !!! | CCTCTTGTTTTGGAGAATCA+AGG | - | tig0020493:100444-100463 | Msa1382300:CDS | 40.0% |
| ATCCACAAGATTCCTTCCTA+TGG | - | tig0020493:100516-100535 | Msa1382300:CDS | 40.0% | |
| TTCCATAGGAAGGAATCTTG+TGG | + | tig0020493:100521-100540 | None:intergenic | 40.0% | |
| AAGATTCCTTCCTATGGAAG+TGG | - | tig0020493:100522-100541 | Msa1382300:intron | 40.0% | |
| AAACTTCCACTTCCATAGGA+AGG | + | tig0020493:100531-100550 | None:intergenic | 40.0% | |
| TGAGAAACTTCCACTTCCAT+AGG | + | tig0020493:100535-100554 | None:intergenic | 40.0% | |
| GGAAGTTTCTCAGAAATGGT+TGG | - | tig0020493:100543-100562 | Msa1382300:intron | 40.0% | |
| ! | TCAGAAATGGTTGGTTCCTT+TGG | - | tig0020493:100552-100571 | Msa1382300:intron | 40.0% |
| GAACATGTAGCTAACACATC+AGG | - | tig0020493:100594-100613 | Msa1382300:intron | 40.0% | |
| ! | CACCATTAATTTGACCCCTT+TGG | + | tig0020493:100668-100687 | None:intergenic | 40.0% |
| TGGTGAACAATCTCAGATTG+AGG | - | tig0020493:100683-100702 | Msa1382300:intron | 40.0% | |
| TTTCTTCTACTTCCACTACC+AGG | + | tig0020493:100744-100763 | None:intergenic | 40.0% | |
| CCGATGAAGTTCGATAAATC+AGG | + | tig0020493:100940-100959 | None:intergenic | 40.0% | |
| ! | ACTTCATCGGTGTCTTGTAT+AGG | - | tig0020493:100950-100969 | Msa1382300:intron | 40.0% |
| ! | AGGTTGGATTAGAATGCTGA+GGG | - | tig0020493:101183-101202 | Msa1382300:intron | 40.0% |
| GAACCATCAGAAATCTTCCT+CGG | + | tig0020493:101228-101247 | None:intergenic | 40.0% | |
| !! | TCTTTAGAAGCATCTCCACT+TGG | + | tig0020493:101312-101331 | None:intergenic | 40.0% |
| ATTCATGTGAGAGCTAGAAG+AGG | - | tig0020493:101339-101358 | Msa1382300:intron | 40.0% | |
| AAAAGATTAGCGAGCGAATG+AGG | - | tig0020493:101511-101530 | Msa1382300:intron | 40.0% | |
| ! | TTGCTTCAAGAACTTGTTCC+AGG | - | tig0020493:101534-101553 | Msa1382300:intron | 40.0% |
| CTACATCAAAGTTCAGTTCC+GGG | + | tig0020493:102108-102127 | None:intergenic | 40.0% | |
| ! | TTTTTACCTGAGGCAAAGGA+GGG | + | tig0020493:102577-102596 | None:intergenic | 40.0% |
| ! | ACTCTTTTTACCTGAGGCAA+AGG | + | tig0020493:102581-102600 | None:intergenic | 40.0% |
| ! | TTTGGGACCCAATGGTAAAT+AGG | - | tig0020493:102746-102765 | Msa1382300:CDS | 40.0% |
| TTTATCCTTGAATGTGTCGG+TGG | + | tig0020493:103029-103048 | None:intergenic | 40.0% | |
| TATTTCCATGTTGAACAGGG+AGG | - | tig0020493:103106-103125 | Msa1382300:five_prime_UTR | 40.0% | |
| ! | AATTCGAAGCGCCAATAGTT+AGG | + | tig0020493:103292-103311 | None:intergenic | 40.0% |
| ATGTATAGAGTTGCAGGACT+TGG | - | tig0020493:103500-103519 | Msa1382300:five_prime_UTR | 40.0% | |
| !! | TGGGCTCTAAACCTTTGAAT+TGG | - | tig0020493:103721-103740 | Msa1382300:five_prime_UTR | 40.0% |
| AACTTGGAAGTGAAAGGGAC+AGG | + | tig0020493:99396-99415 | None:intergenic | 45.0% | |
| CTGCAATGACTGAGGAAACT+TGG | + | tig0020493:99412-99431 | None:intergenic | 45.0% | |
| CAAGTTTCCTCAGTCATTGC+AGG | - | tig0020493:99410-99429 | Msa1382300:three_prime_UTR | 45.0% | |
| GACTGTGGACAAAGGAGAAA+AGG | - | tig0020493:99641-99660 | Msa1382300:three_prime_UTR | 45.0% | |
| TGGCTCAAGAGATATCTTGC+AGG | + | tig0020493:100000-100019 | None:intergenic | 45.0% | |
| GAATTAAGAGATGGGTGGTG+AGG | - | tig0020493:100164-100183 | Msa1382300:intron | 45.0% | |
| TTGGTTCCTTTGGCCAACAT+GGG | - | tig0020493:100562-100581 | Msa1382300:intron | 45.0% | |
| TCAAGGATGCTGGAATCCAA+AGG | - | tig0020493:100649-100668 | Msa1382300:intron | 45.0% | |
| CAAGGATGCTGGAATCCAAA+GGG | - | tig0020493:100650-100669 | Msa1382300:intron | 45.0% | |
| AAGGATGCTGGAATCCAAAG+GGG | - | tig0020493:100651-100670 | Msa1382300:intron | 45.0% | |
| GATTGAGGACTCTATTCACG+AGG | - | tig0020493:100698-100717 | Msa1382300:intron | 45.0% | |
| ! | GAGGTTGGATTAGAATGCTG+AGG | - | tig0020493:101182-101201 | Msa1382300:intron | 45.0% |
| GATTAGAATGCTGAGGGTGA+TGG | - | tig0020493:101189-101208 | Msa1382300:CDS | 45.0% | |
| ATGGAGTGAAAGATTCTCCG+AGG | - | tig0020493:101208-101227 | Msa1382300:CDS | 45.0% | |
| TCTCCGAGGAAGATTTCTGA+TGG | - | tig0020493:101222-101241 | Msa1382300:CDS | 45.0% | |
| GCTAAAGACAACTCTCCAAG+TGG | - | tig0020493:101294-101313 | Msa1382300:intron | 45.0% | |
| ACTTGTTCCAGGATGCAACA+AGG | - | tig0020493:101545-101564 | Msa1382300:intron | 45.0% | |
| GATGCAACAAGGTAGCGATT+TGG | - | tig0020493:101556-101575 | Msa1382300:intron | 45.0% | |
| TGTGCACATGCTTAACACCA+AGG | - | tig0020493:101884-101903 | Msa1382300:intron | 45.0% | |
| GTGCACATGCTTAACACCAA+GGG | - | tig0020493:101885-101904 | Msa1382300:intron | 45.0% | |
| AAAGTTCAGTTCCGGGTTCA+CGG | + | tig0020493:102101-102120 | None:intergenic | 45.0% | |
| TAGATTCTCCAGTCACGCTT+AGG | - | tig0020493:102446-102465 | Msa1382300:CDS | 45.0% | |
| TCACGCTTAGGACTTGGAAT+CGG | - | tig0020493:102458-102477 | Msa1382300:CDS | 45.0% | |
| TGGAAACTTGCGTTTGGGAA+TGG | + | tig0020493:102515-102534 | None:intergenic | 45.0% | |
| ATTCCCAAACGCAAGTTTCC+AGG | - | tig0020493:102514-102533 | Msa1382300:CDS | 45.0% | |
| TTCCCAAACGCAAGTTTCCA+GGG | - | tig0020493:102515-102534 | Msa1382300:CDS | 45.0% | |
| TACCCTGGAAACTTGCGTTT+GGG | + | tig0020493:102520-102539 | None:intergenic | 45.0% | |
| TTACCCTGGAAACTTGCGTT+TGG | + | tig0020493:102521-102540 | None:intergenic | 45.0% | |
| ! | GGGAACTGTGTTGATGAACT+AGG | + | tig0020493:102557-102576 | None:intergenic | 45.0% |
| ! | CTTTTTACCTGAGGCAAAGG+AGG | + | tig0020493:102578-102597 | None:intergenic | 45.0% |
| ! | CTTGACAATTTGGGACCCAA+TGG | - | tig0020493:102738-102757 | Msa1382300:CDS | 45.0% |
| TTCAACCTCCCTGTTCAACA+TGG | + | tig0020493:103114-103133 | None:intergenic | 45.0% | |
| ! | GAAGGGCATGGAATTACATG+AGG | - | tig0020493:103431-103450 | Msa1382300:intron | 45.0% |
| ! | GTTGTGTGGACTGTGGACAA+AGG | - | tig0020493:99633-99652 | Msa1382300:three_prime_UTR | 50.0% |
| CTTGAGCCAATTGCTGAGTC+AGG | - | tig0020493:100065-100084 | Msa1382300:intron | 50.0% | |
| GGGTGGTGAGGAAAATGCAA+TGG | - | tig0020493:100176-100195 | Msa1382300:intron | 50.0% | |
| GCAGCAGCAGCATCATTTCA+TGG | - | tig0020493:100311-100330 | Msa1382300:intron | 50.0% | |
| ! | GTTGGTTCCTTTGGCCAACA+TGG | - | tig0020493:100561-100580 | Msa1382300:intron | 50.0% |
| GAGGACTCTATTCACGAGGA+TGG | - | tig0020493:100702-100721 | Msa1382300:intron | 50.0% | |
| GACTCTATTCACGAGGATGG+AGG | - | tig0020493:100705-100724 | Msa1382300:intron | 50.0% | |
| ! | ATTCACGAGGATGGAGGTAC+AGG | - | tig0020493:100711-100730 | Msa1382300:intron | 50.0% |
| TGCAAGACTGTGGCTGTTTG+TGG | + | tig0020493:101370-101389 | None:intergenic | 50.0% | |
| ACAGCCACAGTCTTGCAGAA+AGG | - | tig0020493:101373-101392 | Msa1382300:intron | 50.0% | |
| CAGCCACAGTCTTGCAGAAA+GGG | - | tig0020493:101374-101393 | Msa1382300:intron | 50.0% | |
| GTACCCTTTCTGCAAGACTG+TGG | + | tig0020493:101380-101399 | None:intergenic | 50.0% | |
| ATCGCTACCTTGTTGCATCC+TGG | + | tig0020493:101555-101574 | None:intergenic | 50.0% | |
| TGTGCAATCACTGCAGCAAC+AGG | - | tig0020493:101776-101795 | Msa1382300:intron | 50.0% | |
| ATCACTGCAGCAACAGGTTG+AGG | - | tig0020493:101782-101801 | Msa1382300:intron | 50.0% | |
| TTCCAAGTCCTAAGCGTGAC+TGG | + | tig0020493:102457-102476 | None:intergenic | 50.0% | |
| ! | GGAATCGGTGGATTTGTTCC+TGG | - | tig0020493:102473-102492 | Msa1382300:CDS | 50.0% |
| GGATGAGAGGAGCTTATACC+AGG | + | tig0020493:102494-102513 | None:intergenic | 50.0% | |
| TGCGTTTGGGAATGGATGAG+AGG | + | tig0020493:102507-102526 | None:intergenic | 50.0% | |
| CGCAAGTTTCCAGGGTAACA+TGG | - | tig0020493:102523-102542 | Msa1382300:CDS | 50.0% | |
| AGTTTCCAGGGTAACATGGC+TGG | - | tig0020493:102527-102546 | Msa1382300:CDS | 50.0% | |
| CGATACCACCGACACATTCA+AGG | - | tig0020493:103021-103040 | Msa1382300:five_prime_UTR | 50.0% | |
| TCCTTTGGCCAACATGGGTC+AGG | - | tig0020493:100567-100586 | Msa1382300:intron | 55.0% | |
| ACCTGACCCATGTTGGCCAA+AGG | + | tig0020493:100571-100590 | None:intergenic | 55.0% | |
| TTTGGCCAACATGGGTCAGG+TGG | - | tig0020493:100570-100589 | Msa1382300:intron | 55.0% | |
| TTGGCCAACATGGGTCAGGT+GGG | - | tig0020493:100571-100590 | Msa1382300:intron | 55.0% | |
| ACAGGATCTGCACCTGGTAG+TGG | - | tig0020493:100729-100748 | Msa1382300:intron | 55.0% | |
| GAAACTTGCCACCGTGAACC+CGG | - | tig0020493:102087-102106 | Msa1382300:intron | 55.0% | |
| CTCCAGTCACGCTTAGGACT+TGG | - | tig0020493:102452-102471 | Msa1382300:CDS | 55.0% | |
| CGCTTAGGACTTGGAATCGG+TGG | - | tig0020493:102461-102480 | Msa1382300:CDS | 55.0% | |
| ACAGTTCCCTCCTTTGCCTC+AGG | - | tig0020493:102568-102587 | Msa1382300:CDS | 55.0% | |
| TGGCCAACATGGGTCAGGTG+GGG | - | tig0020493:100572-100591 | Msa1382300:intron | 60.0% | |
| GTTCCCCACCTGACCCATGT+TGG | + | tig0020493:100578-100597 | None:intergenic | 60.0% | |
| ! | GGAGGTACAGGATCTGCACC+TGG | - | tig0020493:100723-100742 | Msa1382300:intron | 60.0% |
| GTTCAGTTCCGGGTTCACGG+TGG | + | tig0020493:102098-102117 | None:intergenic | 60.0% | |
| GCATGCCAGCCATGTTACCC+TGG | + | tig0020493:102535-102554 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020493 | gene | 99210 | 103779 | 99210 | ID=Msa1382300;Name=Msa1382300 |
| tig0020493 | mRNA | 99210 | 103779 | 99210 | ID=Msa1382300-mRNA-1;Parent=Msa1382300;Name=Msa1382300-mRNA-1;_AED=0.03;_eAED=0.03;_QI=936|1|1|1|0.87|0.77|9|633|427 |
| tig0020493 | exon | 99210 | 99865 | 99210 | ID=Msa1382300-mRNA-1:exon:8015;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 100230 | 100311 | 100230 | ID=Msa1382300-mRNA-1:exon:8014;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 100400 | 100540 | 100400 | ID=Msa1382300-mRNA-1:exon:8013;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 100842 | 100913 | 100842 | ID=Msa1382300-mRNA-1:exon:8012;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 101186 | 101254 | 101186 | ID=Msa1382300-mRNA-1:exon:8011;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 101423 | 101488 | 101423 | ID=Msa1382300-mRNA-1:exon:8010;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 101594 | 101794 | 101594 | ID=Msa1382300-mRNA-1:exon:8009;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 102186 | 103445 | 102186 | ID=Msa1382300-mRNA-1:exon:8008;Parent=Msa1382300-mRNA-1 |
| tig0020493 | exon | 103474 | 103779 | 103474 | ID=Msa1382300-mRNA-1:exon:8007;Parent=Msa1382300-mRNA-1 |
| tig0020493 | five_prime_UTR | 103474 | 103779 | 103474 | ID=Msa1382300-mRNA-1:five_prime_utr;Parent=Msa1382300-mRNA-1 |
| tig0020493 | five_prime_UTR | 102816 | 103445 | 102816 | ID=Msa1382300-mRNA-1:five_prime_utr;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 102186 | 102815 | 102186 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 101594 | 101794 | 101594 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 101423 | 101488 | 101423 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 101186 | 101254 | 101186 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 100842 | 100913 | 100842 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 100400 | 100540 | 100400 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 100230 | 100311 | 100230 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | CDS | 99843 | 99865 | 99843 | ID=Msa1382300-mRNA-1:cds;Parent=Msa1382300-mRNA-1 |
| tig0020493 | three_prime_UTR | 99210 | 99842 | 99210 | ID=Msa1382300-mRNA-1:three_prime_utr;Parent=Msa1382300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
