Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452550 | A0A396JKY1 | 90.577 | 849 | 60 | 4 | 1 | 838 | 1 | 840 | 0.0 | 1491 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012390 | Msa1452550 | 0.859392 | 4.270626e-63 | -8.615850e-47 |
| Msa1375980 | Msa1452550 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
| Msa1400830 | Msa1452550 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa1403820 | Msa1452550 | 0.811325 | 7.409525e-51 | -8.615850e-47 |
| Msa1413360 | Msa1452550 | 0.816018 | 6.864085e-52 | -8.615850e-47 |
| Msa1418780 | Msa1452550 | 0.804923 | 1.711241e-49 | -8.615850e-47 |
| Msa0693050 | Msa1452550 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0175220 | Msa1452550 | 0.843648 | 1.231241e-58 | -8.615850e-47 |
| Msa1342110 | Msa1452550 | 0.806491 | 8.017834e-50 | -8.615850e-47 |
| Msa0392120 | Msa1452550 | 0.805039 | 1.618390e-49 | -8.615850e-47 |
| Msa0470080 | Msa1452550 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
| Msa1038530 | Msa1452550 | 0.816175 | 6.333067e-52 | -8.615850e-47 |
| Msa0872890 | Msa1452550 | 0.801935 | 7.118803e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452550 | MtrunA17_Chr1g0160911 | 90.577 | 849 | 60 | 4 | 1 | 838 | 1 | 840 | 0.0 | 1491 |
| Msa1452550 | MtrunA17_Chr3g0106931 | 32.620 | 187 | 118 | 4 | 118 | 302 | 580 | 760 | 9.52e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452550 | AT1G23180.1 | 54.203 | 797 | 327 | 8 | 46 | 836 | 68 | 832 | 0.0 | 805 |
| Msa1452550 | AT1G23180.2 | 53.596 | 584 | 239 | 6 | 46 | 624 | 68 | 624 | 0.0 | 581 |
Find 188 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAATGTCTCACCAATTT+TGG | 0.103166 | tig0034029:-6721 | None:intergenic |
| CTTTAACTGCATCTCTTTAT+TGG | 0.150051 | tig0034029:-9479 | None:intergenic |
| TATAACAAACCTTCTAAATT+TGG | 0.153821 | tig0034029:+8100 | Msa1452550:CDS |
| CTTTGCTGCGGAGGGGAATA+TGG | 0.171865 | tig0034029:-10479 | None:intergenic |
| CCTTGGTCCTTATTTGTAAA+AGG | 0.188169 | tig0034029:+11011 | Msa1452550:three_prime_UTR |
| TGAACTCGAGATTCTATAAT+TGG | 0.192304 | tig0034029:+11122 | Msa1452550:three_prime_UTR |
| CAAAATCTCTTGAAAATTTC+GGG | 0.195077 | tig0034029:+10032 | Msa1452550:CDS |
| GCAAAATCTCTTGAAAATTT+CGG | 0.195502 | tig0034029:+10031 | Msa1452550:CDS |
| CAATAAAGAGATGCAGTTAA+AGG | 0.219023 | tig0034029:+9480 | Msa1452550:CDS |
| GGAAGCTGCAGCGGGTATTT+TGG | 0.228128 | tig0034029:+6642 | Msa1452550:CDS |
| GCAAAAGTCAATGCAATTAT+TGG | 0.230500 | tig0034029:+8178 | Msa1452550:CDS |
| TTGGTTATGTATCTTAGTTT+TGG | 0.237956 | tig0034029:+11058 | Msa1452550:three_prime_UTR |
| TTGCCTTTGGACATGGTCTA+AGG | 0.249061 | tig0034029:+5045 | Msa1452550:five_prime_UTR |
| ACGTGGGTTGTATGACTTAT+AGG | 0.253698 | tig0034029:-8029 | None:intergenic |
| GGCGCATCAGAAGTACTTAT+TGG | 0.256084 | tig0034029:+8121 | Msa1452550:CDS |
| AGCAGGTGTTATTCCAAAAT+TGG | 0.260256 | tig0034029:+6708 | Msa1452550:CDS |
| TGATTCTATTAGTGGATTCT+TGG | 0.268837 | tig0034029:+11039 | Msa1452550:three_prime_UTR |
| GCCTTCTTAGATTCATTAAC+TGG | 0.272768 | tig0034029:-9594 | None:intergenic |
| TTTAACTGCATCTCTTTATT+GGG | 0.284738 | tig0034029:-9478 | None:intergenic |
| CGCATCTGTTCTTGAGTTTG+TGG | 0.296059 | tig0034029:+9938 | Msa1452550:CDS |
| TTAGTTCCTGTGCCATTAAT+AGG | 0.303101 | tig0034029:+7998 | Msa1452550:CDS |
| ATTTCTGTGGATATTGAAAA+TGG | 0.303359 | tig0034029:+9990 | Msa1452550:CDS |
| CCTGGCAAAGAGAGGGAGTT+TGG | 0.307481 | tig0034029:-5278 | None:intergenic |
| GGAAGGGGCTGTGTATTCTT+TGG | 0.309325 | tig0034029:+10719 | Msa1452550:CDS |
| GGTTGGAGGAAGAGGGTGTT+AGG | 0.316836 | tig0034029:-5180 | None:intergenic |
| CTTTCGATTTCTGTGCCATC+TGG | 0.319788 | tig0034029:-8073 | None:intergenic |
| ACTTCATTTGCTCAGGAGTT+TGG | 0.324562 | tig0034029:+10905 | Msa1452550:CDS |
| AACAAGCTATAATTACTCTT+TGG | 0.337922 | tig0034029:+6174 | Msa1452550:CDS |
| TAGGCTGCAGCACCTATTAA+TGG | 0.337954 | tig0034029:-8010 | None:intergenic |
| GTTAAACTAAGTTCTCTATC+TGG | 0.338525 | tig0034029:+10522 | Msa1452550:CDS |
| TATCTTCAATCGACCAATAT+AGG | 0.346902 | tig0034029:+6330 | Msa1452550:CDS |
| GCTGGCAGCGACGCAAGCTT+TGG | 0.349598 | tig0034029:+8489 | Msa1452550:CDS |
| GACAATATAATGCAATTTCC+TGG | 0.354985 | tig0034029:+6227 | Msa1452550:CDS |
| CCAAACTCCCTCTCTTTGCC+AGG | 0.357982 | tig0034029:+5278 | Msa1452550:CDS |
| TGACAGAACAATTCTTCTTA+AGG | 0.360300 | tig0034029:-10859 | None:intergenic |
| AGGAAGAGGGTGTTAGGATT+GGG | 0.360457 | tig0034029:-5174 | None:intergenic |
| TCTGATGCGCCAAATTTAGA+AGG | 0.361169 | tig0034029:-8109 | None:intergenic |
| AGTGTTAAGGTTGGAGGAAG+AGG | 0.366186 | tig0034029:-5188 | None:intergenic |
| CAGGAAATAGATGAAGTAGA+AGG | 0.367189 | tig0034029:+6068 | Msa1452550:intron |
| TGCGGAGCGTGCCAATGAAA+TGG | 0.370554 | tig0034029:-10443 | None:intergenic |
| TTCCCCTCCGCAGCAAAGAT+TGG | 0.377007 | tig0034029:+10484 | Msa1452550:CDS |
| AATGAATCTAAGAAGGCATT+TGG | 0.382340 | tig0034029:+9600 | Msa1452550:CDS |
| TCAATATCCACAGAAATAAT+CGG | 0.385085 | tig0034029:-9984 | None:intergenic |
| AATACTGTATAATCTTAGTA+TGG | 0.386852 | tig0034029:+10791 | Msa1452550:CDS |
| CCGAACTAGATTCTGCTCTA+AGG | 0.388734 | tig0034029:-6274 | None:intergenic |
| CTGCTACAGAATTCCTATAT+TGG | 0.391475 | tig0034029:-6343 | None:intergenic |
| GAGGAAGAGGGTGTTAGGAT+TGG | 0.392316 | tig0034029:-5175 | None:intergenic |
| TCCGACGAAGGGTCTGGAAC+TGG | 0.394882 | tig0034029:+5087 | Msa1452550:five_prime_UTR |
| AAGCTTGCGTCGCTGCCAGC+TGG | 0.396449 | tig0034029:-8486 | None:intergenic |
| TCTAATGACTTTAGATGCTT+CGG | 0.398255 | tig0034029:-7903 | None:intergenic |
| TTCCACAGGAGCTATTATTT+CGG | 0.403093 | tig0034029:+10698 | Msa1452550:CDS |
| ATAAATCCCTCCCATTTCAT+TGG | 0.410195 | tig0034029:+10432 | Msa1452550:CDS |
| AGCTGGAGCTATTGCGGAAA+AGG | 0.415818 | tig0034029:+9321 | Msa1452550:CDS |
| TTGATCTGTTCTACAAGTCT+TGG | 0.426493 | tig0034029:-10600 | None:intergenic |
| TTCATTCTCTTTAGAAGCAC+AGG | 0.426809 | tig0034029:+10626 | Msa1452550:CDS |
| AGTTGAGGGCAAAGTCTACT+TGG | 0.434761 | tig0034029:+11084 | Msa1452550:three_prime_UTR |
| CATTCAGCACTTCTAGCTGC+TGG | 0.435416 | tig0034029:+10825 | Msa1452550:CDS |
| GCCTTGTTTGTTCGTATGCT+AGG | 0.436011 | tig0034029:+6125 | Msa1452550:CDS |
| CTCTTTAGAAGCACAGGAAA+AGG | 0.436036 | tig0034029:+10632 | Msa1452550:CDS |
| TATCAAGTGGATCATGATCT+AGG | 0.436132 | tig0034029:-6148 | None:intergenic |
| TTACAGAATTCTTGTTATTG+AGG | 0.445107 | tig0034029:+7970 | Msa1452550:CDS |
| AGGAAATAGATGAAGTAGAA+GGG | 0.446774 | tig0034029:+6069 | Msa1452550:intron |
| CGCGTCTGACACTCTTGCAT+TGG | 0.447307 | tig0034029:+8287 | Msa1452550:CDS |
| TGCCTTTGGACATGGTCTAA+GGG | 0.449765 | tig0034029:+5046 | Msa1452550:five_prime_UTR |
| TTAGATGCTTCGGAGTCATA+TGG | 0.450507 | tig0034029:-7893 | None:intergenic |
| GGGGAATCATCTTCTGACTT+TGG | 0.451107 | tig0034029:+6089 | Msa1452550:CDS |
| AGAACAATTCTTCTTAAGGC+TGG | 0.453913 | tig0034029:-10855 | None:intergenic |
| TCGGCTTGTGAGGCAGCTGC+AGG | 0.460226 | tig0034029:+6293 | Msa1452550:CDS |
| GCGGAGCGTGCCAATGAAAT+GGG | 0.461882 | tig0034029:-10442 | None:intergenic |
| TTAAATCGCTCAGACGTAGC+TGG | 0.461923 | tig0034029:+9304 | Msa1452550:CDS |
| TTCTTGTAAACTGGGTAAAG+AGG | 0.462516 | tig0034029:-9910 | None:intergenic |
| AGGAATTCTGTAGCAGATAG+TGG | 0.465149 | tig0034029:+6350 | Msa1452550:CDS |
| ATTGCTGACACAATCTTCCT+TGG | 0.465619 | tig0034029:+6394 | Msa1452550:CDS |
| CTTTGGCAATATTCACTTGG+TGG | 0.469366 | tig0034029:+6191 | Msa1452550:CDS |
| CCTTCGTCGGAAAACAAGAT+AGG | 0.472598 | tig0034029:-5075 | None:intergenic |
| ACATATGCGTATTGCATTCA+AGG | 0.476617 | tig0034029:+8408 | Msa1452550:CDS |
| AAAGGGCACTTCATTTGCTC+AGG | 0.479741 | tig0034029:+10898 | Msa1452550:CDS |
| TCAAGGAGGCTGGTGCAGTT+AGG | 0.484639 | tig0034029:+8425 | Msa1452550:CDS |
| TCGTGTTGGTGCTATTGAAA+TGG | 0.486108 | tig0034029:+8225 | Msa1452550:CDS |
| GTGTTAAGGTTGGAGGAAGA+GGG | 0.486174 | tig0034029:-5187 | None:intergenic |
| CAATGATAATGCAGTCCAGC+TGG | 0.486189 | tig0034029:+8471 | Msa1452550:CDS |
| TCCCCTCCGCAGCAAAGATT+GGG | 0.486285 | tig0034029:+10485 | Msa1452550:CDS |
| CCTTAGAGCAGAATCTAGTT+CGG | 0.486396 | tig0034029:+6274 | Msa1452550:CDS |
| AGAATTCTTGTTATTGAGGA+AGG | 0.486981 | tig0034029:+7974 | Msa1452550:CDS |
| TGCTGCAGATATTGCAAGAC+CGG | 0.487218 | tig0034029:-10361 | None:intergenic |
| TATGTTTAGAAGAACATCCT+TGG | 0.490738 | tig0034029:+10994 | Msa1452550:three_prime_UTR |
| GCGCGAAATGAGAAGTGTTA+AGG | 0.491645 | tig0034029:-5201 | None:intergenic |
| GCATTTGGTGGAGCCGATGA+TGG | 0.492074 | tig0034029:+9615 | Msa1452550:CDS |
| TTTGCTGCGGAGGGGAATAT+GGG | 0.494178 | tig0034029:-10478 | None:intergenic |
| ATTGAAGAAGGTAGTGAAAG+AGG | 0.498186 | tig0034029:+10750 | Msa1452550:CDS |
| TACCCAATCTTTGCTGCGGA+GGG | 0.498761 | tig0034029:-10487 | None:intergenic |
| TACCGGTGTGAGTCGATGAC+TGG | 0.501329 | tig0034029:+11245 | Msa1452550:three_prime_UTR |
| TTGGAAACATGACGAGTCCA+TGG | 0.503224 | tig0034029:+10924 | Msa1452550:exon |
| CGTATTGCATTCAAGGAGGC+TGG | 0.506096 | tig0034029:+8415 | Msa1452550:CDS |
| CGAGGAAGAGAGAGTGACTC+TGG | 0.507018 | tig0034029:-5248 | None:intergenic |
| AGCATCTAAAGTCATTAGAA+AGG | 0.509035 | tig0034029:+7907 | Msa1452550:CDS |
| TAATTCCTTTGATCCATCAT+CGG | 0.513509 | tig0034029:-9628 | None:intergenic |
| ACTCGTAGTTGCAGCAATAA+CGG | 0.516523 | tig0034029:+5304 | Msa1452550:CDS |
| CAACAATTCCTTGTTCGTGT+TGG | 0.517289 | tig0034029:+8211 | Msa1452550:CDS |
| ATGAGAAGTGTTAAGGTTGG+AGG | 0.518276 | tig0034029:-5194 | None:intergenic |
| ACAATCTTCCTTGGCTTCTG+AGG | 0.520554 | tig0034029:+6403 | Msa1452550:CDS |
| CTTTCATATCCTCATCATCA+AGG | 0.521881 | tig0034029:-6615 | None:intergenic |
| CTACCCAATCTTTGCTGCGG+AGG | 0.523971 | tig0034029:-10488 | None:intergenic |
| TGTTTAAAGATTCCTTCCCA+TGG | 0.524675 | tig0034029:-10941 | None:intergenic |
| AGTGTAACTTCTGCGTTGAT+CGG | 0.525464 | tig0034029:-10564 | None:intergenic |
| CCATGATGTCATGGTTAACA+TGG | 0.527085 | tig0034029:-6681 | None:intergenic |
| GCTGCAACTACGAGTGAACC+TGG | 0.528924 | tig0034029:-5296 | None:intergenic |
| GAAATAATCGGACTCAGTGT+TGG | 0.530686 | tig0034029:-9972 | None:intergenic |
| ACTCTTTGGCAATATTCACT+TGG | 0.531474 | tig0034029:+6188 | Msa1452550:CDS |
| CATGACATCATGGTTGAAGC+AGG | 0.531883 | tig0034029:+6691 | Msa1452550:CDS |
| ATTCAGCACTTCTAGCTGCT+GGG | 0.532272 | tig0034029:+10826 | Msa1452550:CDS |
| GAACAATTCTTCTTAAGGCT+GGG | 0.533123 | tig0034029:-10854 | None:intergenic |
| TTGGTGAAGCTGATTGAAGA+AGG | 0.533346 | tig0034029:+10738 | Msa1452550:CDS |
| ATAGCTTGTTCTCTATCAAG+TGG | 0.535682 | tig0034029:-6161 | None:intergenic |
| CACCCTCGGTTTCAATCACT+CGG | 0.536142 | tig0034029:-9258 | None:intergenic |
| ACACTCTTGCATTGGATCGA+CGG | 0.536563 | tig0034029:+8295 | Msa1452550:CDS |
| ACAGGAGCTATTATTTCGGA+AGG | 0.538014 | tig0034029:+10702 | Msa1452550:CDS |
| CTTTGGAAAAGCTGTCTGCT+AGG | 0.538845 | tig0034029:+8506 | Msa1452550:CDS |
| AGGAGCTATTATTTCGGAAG+GGG | 0.539631 | tig0034029:+10704 | Msa1452550:CDS |
| ACCAGTTAATGAATCTAAGA+AGG | 0.539869 | tig0034029:+9593 | Msa1452550:CDS |
| GTGCAGTTAGGCATTTAGTA+CGG | 0.544923 | tig0034029:+8437 | Msa1452550:CDS |
| AGCAAGTTATATCTTTGTAC+CGG | 0.545376 | tig0034029:+11228 | Msa1452550:three_prime_UTR |
| GAATCTAAGAAGGCATTTGG+TGG | 0.547826 | tig0034029:+9603 | Msa1452550:CDS |
| TCTGTGCCATCTGGAAATGC+AGG | 0.548785 | tig0034029:-8064 | None:intergenic |
| CTTAGTAGAATAGTATCTGA+AGG | 0.555239 | tig0034029:+10666 | Msa1452550:CDS |
| GGAAATAGATGAAGTAGAAG+GGG | 0.555447 | tig0034029:+6070 | Msa1452550:intron |
| TTCCTATACCTCAGAAGCCA+AGG | 0.555612 | tig0034029:-6411 | None:intergenic |
| AGGGAGTTTGGAAGAGTACG+AGG | 0.555664 | tig0034029:-5266 | None:intergenic |
| GAAGGGGTGGTAGATTCCAC+AGG | 0.559231 | tig0034029:+10684 | Msa1452550:CDS |
| AGAATCTAGTTCGGCTTGTG+AGG | 0.559361 | tig0034029:+6283 | Msa1452550:CDS |
| ATAGAGAACTTAGTTTAACT+AGG | 0.573283 | tig0034029:-10518 | None:intergenic |
| TAGAATAGTATCTGAAGGGG+TGG | 0.574461 | tig0034029:+10671 | Msa1452550:CDS |
| GCCTTTGGACATGGTCTAAG+GGG | 0.574935 | tig0034029:+5047 | Msa1452550:five_prime_UTR |
| CGATTTAAAATACTAACTAA+AGG | 0.575009 | tig0034029:-9289 | None:intergenic |
| ACTGAGTCCGATTATTTCTG+TGG | 0.577062 | tig0034029:+9977 | Msa1452550:CDS |
| ATATGCTATTGAACTTGAAG+AGG | 0.580089 | tig0034029:+10338 | Msa1452550:CDS |
| AGACGTAGCTGGAGCTATTG+CGG | 0.580587 | tig0034029:+9315 | Msa1452550:CDS |
| CAGGAGCTATTATTTCGGAA+GGG | 0.582745 | tig0034029:+10703 | Msa1452550:CDS |
| CCATGTTAACCATGACATCA+TGG | 0.583441 | tig0034029:+6681 | Msa1452550:CDS |
| GGTCATTCTGATCACTCCGC+TGG | 0.584009 | tig0034029:+5325 | Msa1452550:CDS |
| CAGCAGCTAGAAGTGCTGAA+TGG | 0.585525 | tig0034029:-10824 | None:intergenic |
| GCTATTGAACTTGAAGAGGC+CGG | 0.585806 | tig0034029:+10342 | Msa1452550:CDS |
| TTAGTAGAATAGTATCTGAA+GGG | 0.587830 | tig0034029:+10667 | Msa1452550:CDS |
| CTGCTTCAACCATGATGTCA+TGG | 0.590843 | tig0034029:-6690 | None:intergenic |
| CAATAGCACCAACACGAACA+AGG | 0.593972 | tig0034029:-8219 | None:intergenic |
| GCAGCACCTATTAATGGCAC+AGG | 0.594699 | tig0034029:-8004 | None:intergenic |
| AAAGTGAAGGAAGCTGCAGC+GGG | 0.596369 | tig0034029:+6634 | Msa1452550:CDS |
| TATGAAGTACCTTGATGATG+AGG | 0.596634 | tig0034029:+6606 | Msa1452550:CDS |
| GAAAGTGAAGGAAGCTGCAG+CGG | 0.599166 | tig0034029:+6633 | Msa1452550:CDS |
| TAAAGGAGCTAAACCACCCT+CGG | 0.600173 | tig0034029:-9272 | None:intergenic |
| TGCATTGCTAGAACTTGTGA+AGG | 0.603172 | tig0034029:+7940 | Msa1452550:CDS |
| TTCCGAAATAATAGCTCCTG+TGG | 0.603640 | tig0034029:-10700 | None:intergenic |
| CGAGTGAACCTGGCAAAGAG+AGG | 0.604709 | tig0034029:-5286 | None:intergenic |
| TGGAGCCGATGATGGATCAA+AGG | 0.607714 | tig0034029:+9623 | Msa1452550:CDS |
| TTCAGCACTTCTAGCTGCTG+GGG | 0.609035 | tig0034029:+10827 | Msa1452550:CDS |
| AACTAGATTCTGCTCTAAGG+AGG | 0.611088 | tig0034029:-6271 | None:intergenic |
| CCTTTGGACATGGTCTAAGG+GGG | 0.613106 | tig0034029:+5048 | Msa1452550:five_prime_UTR |
| TGGAAACATGACGAGTCCAT+GGG | 0.614382 | tig0034029:+10925 | Msa1452550:exon |
| GAGCGTGCCAATGAAATGGG+AGG | 0.615707 | tig0034029:-10439 | None:intergenic |
| ACCCAATCTTTGCTGCGGAG+GGG | 0.616154 | tig0034029:-10486 | None:intergenic |
| CGAGTGATTGAAACCGAGGG+TGG | 0.618745 | tig0034029:+9259 | Msa1452550:CDS |
| TGAAGTGCCCTTTGCCACTG+TGG | 0.620491 | tig0034029:-10888 | None:intergenic |
| TCCAGTTCCAGACCCTTCGT+CGG | 0.620804 | tig0034029:-5088 | None:intergenic |
| GTTGAGGGCAAAGTCTACTT+GGG | 0.620842 | tig0034029:+11085 | Msa1452550:three_prime_UTR |
| GAAATGAGAAGTGTTAAGGT+TGG | 0.621861 | tig0034029:-5197 | None:intergenic |
| AAGTCATTAGAAAGGAAGCA+AGG | 0.621933 | tig0034029:+7915 | Msa1452550:CDS |
| GCCTAGCATACGAACAAACA+AGG | 0.626275 | tig0034029:-6126 | None:intergenic |
| AACCAGTCATCGACTCACAC+CGG | 0.627061 | tig0034029:-11247 | None:intergenic |
| TTGAAGATAGTGATTGCAGA+AGG | 0.627279 | tig0034029:-6316 | None:intergenic |
| GAGTGAACCTGGCAAAGAGA+GGG | 0.627352 | tig0034029:-5285 | None:intergenic |
| TGCCGAGTGATTGAAACCGA+GGG | 0.634638 | tig0034029:+9256 | Msa1452550:CDS |
| GAGGCGCCTGCATTTCCAGA+TGG | 0.635163 | tig0034029:+8058 | Msa1452550:CDS |
| AGCGTGCCAATGAAATGGGA+GGG | 0.637506 | tig0034029:-10438 | None:intergenic |
| CAGATGGCACAGAAATCGAA+AGG | 0.639899 | tig0034029:+8074 | Msa1452550:CDS |
| CAGCTACCCAATCTTTGCTG+CGG | 0.649246 | tig0034029:-10491 | None:intergenic |
| CACAAACTCAAGAACAGATG+CGG | 0.650980 | tig0034029:-9937 | None:intergenic |
| TAGTAGAATAGTATCTGAAG+GGG | 0.655599 | tig0034029:+10668 | Msa1452550:CDS |
| AACATGACGAGTCCATGGGA+AGG | 0.664260 | tig0034029:+10929 | Msa1452550:exon |
| TTGCCGAGTGATTGAAACCG+AGG | 0.671670 | tig0034029:+9255 | Msa1452550:CDS |
| TGATGAGGATATGAAAGTGA+AGG | 0.675412 | tig0034029:+6621 | Msa1452550:CDS |
| ACAACAAGATTAATACAACC+AGG | 0.686889 | tig0034029:-6245 | None:intergenic |
| CAGGCGCCTCGTATAAACGT+GGG | 0.689019 | tig0034029:-8045 | None:intergenic |
| TGACTTTGGTGATAGCTACG+TGG | 0.692051 | tig0034029:+6103 | Msa1452550:CDS |
| GCAGGCGCCTCGTATAAACG+TGG | 0.692382 | tig0034029:-8046 | None:intergenic |
| AGGACTTCAAAATCTCCACA+AGG | 0.708917 | tig0034029:-9890 | None:intergenic |
| ATACAACCCACGTTTATACG+AGG | 0.715558 | tig0034029:+8039 | Msa1452550:CDS |
| AGCAGAGACAGAATCTGACG+TGG | 0.737628 | tig0034029:+10296 | Msa1452550:intron |
| TATGCGTATTGCATTCAAGG+AGG | 0.753564 | tig0034029:+8411 | Msa1452550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATTTCATATAAATAA+AGG | + | tig0034029:7556-7575 | Msa1452550:intron | 10.0% |
| !!! | GTTCAAAATATATTTTTTTA+GGG | - | tig0034029:7608-7627 | None:intergenic | 10.0% |
| !!! | AGTTCAAAATATATTTTTTT+AGG | - | tig0034029:7609-7628 | None:intergenic | 10.0% |
| !! | AAAAAAATGAAATTCTAAAT+AGG | - | tig0034029:9526-9545 | None:intergenic | 10.0% |
| !! | TGTTTATAAATATATGAAAA+TGG | + | tig0034029:10107-10126 | Msa1452550:intron | 10.0% |
| !!! | TTGTCTAAAATATTATAATG+TGG | + | tig0034029:5910-5929 | Msa1452550:intron | 15.0% |
| !! | TAATTAGTATACAAAAACTT+TGG | + | tig0034029:6435-6454 | Msa1452550:intron | 15.0% |
| !! | TATATCAAGAATTATAAAAC+TGG | - | tig0034029:6779-6798 | None:intergenic | 15.0% |
| !!! | AAATTATATGGTTCTAATTA+GGG | + | tig0034029:7182-7201 | Msa1452550:intron | 15.0% |
| !! | AATTTATATTACAACAATAG+AGG | + | tig0034029:8572-8591 | Msa1452550:intron | 15.0% |
| !!! | ACTTAACAAGATTTTAATTT+TGG | + | tig0034029:9407-9426 | Msa1452550:intron | 15.0% |
| !!! | TATTGAATAATTTTTGCCTT+TGG | + | tig0034029:5032-5051 | Msa1452550:five_prime_UTR | 20.0% |
| !! | TGTGAAATTAAGAAAATGAA+GGG | - | tig0034029:5381-5400 | None:intergenic | 20.0% |
| !! | CATATTATGATTTACAATAG+TGG | - | tig0034029:5537-5556 | None:intergenic | 20.0% |
| !! | GTAAATCATAATATGTTCAT+TGG | + | tig0034029:5542-5561 | Msa1452550:intron | 20.0% |
| !!! | GAAATTATATGGTTCTAATT+AGG | + | tig0034029:7181-7200 | Msa1452550:intron | 20.0% |
| !!! | TAAATTATGTATGCTTTGAA+TGG | + | tig0034029:7416-7435 | Msa1452550:intron | 20.0% |
| !! | AAGAGACAAATATAAACTTA+GGG | - | tig0034029:7531-7550 | None:intergenic | 20.0% |
| !! | AAAGAGACAAATATAAACTT+AGG | - | tig0034029:7532-7551 | None:intergenic | 20.0% |
| !! | TATAACAAACCTTCTAAATT+TGG | + | tig0034029:8100-8119 | Msa1452550:CDS | 20.0% |
| !!! | ATGAAAGAAAGTACTTTATA+AGG | - | tig0034029:8626-8645 | None:intergenic | 20.0% |
| !! | CATTGTAAACAGAAAAATTA+AGG | + | tig0034029:8643-8662 | Msa1452550:intron | 20.0% |
| !! | AGAAACAATTGTACATATAA+CGG | + | tig0034029:8914-8933 | Msa1452550:intron | 20.0% |
| !! | AAGGGATATTATACAAATTA+AGG | + | tig0034029:8940-8959 | Msa1452550:intron | 20.0% |
| !!! | AGTTTGTATTTTCTGTTATA+TGG | + | tig0034029:9022-9041 | Msa1452550:intron | 20.0% |
| !! | AATAAATGAAAAGAAGATAG+AGG | + | tig0034029:9054-9073 | Msa1452550:intron | 20.0% |
| !! | ATAAATGAAAAGAAGATAGA+GGG | + | tig0034029:9055-9074 | Msa1452550:intron | 20.0% |
| !!! | CGATTTAAAATACTAACTAA+AGG | - | tig0034029:9292-9311 | None:intergenic | 20.0% |
| !! | TCTTATATGTTAACTAATTC+TGG | + | tig0034029:9359-9378 | Msa1452550:intron | 20.0% |
| !! | TAAACATTGTAAAACGAAAA+TGG | - | tig0034029:10093-10112 | None:intergenic | 20.0% |
| !! | AATACTGTATAATCTTAGTA+TGG | + | tig0034029:10791-10810 | Msa1452550:CDS | 20.0% |
| !!! | CAAAATACCTTTTACAAATA+AGG | - | tig0034029:11021-11040 | None:intergenic | 20.0% |
| ! | GTGTGAAATTAAGAAAATGA+AGG | - | tig0034029:5382-5401 | None:intergenic | 25.0% |
| ! | AGTGTTATGTTATGTTTAAC+TGG | + | tig0034029:5607-5626 | Msa1452550:intron | 25.0% |
| ! | GAGAGAAGAACTTAAATAAA+CGG | + | tig0034029:5725-5744 | Msa1452550:intron | 25.0% |
| ! | AACAAGCTATAATTACTCTT+TGG | + | tig0034029:6174-6193 | Msa1452550:CDS | 25.0% |
| ! | GTGTAGAAAATGAGAATATT+TGG | + | tig0034029:6476-6495 | Msa1452550:intron | 25.0% |
| ! | TTAAACTACTATACATAAGC+AGG | - | tig0034029:6998-7017 | None:intergenic | 25.0% |
| ! | GGAACGTATCAAAATAAATT+TGG | - | tig0034029:7056-7075 | None:intergenic | 25.0% |
| !!! | CAGATTATTTTAAAGTATCG+TGG | - | tig0034029:7322-7341 | None:intergenic | 25.0% |
| ! | AACATTTCTGTTGAGATTTA+GGG | - | tig0034029:7670-7689 | None:intergenic | 25.0% |
| ! | TAACATTTCTGTTGAGATTT+AGG | - | tig0034029:7671-7690 | None:intergenic | 25.0% |
| !!! | CAGAATGTCATTATTTCTAA+TGG | - | tig0034029:7732-7751 | None:intergenic | 25.0% |
| !! | GTTTACTGATATTTTTCCTT+TGG | + | tig0034029:7754-7773 | Msa1452550:intron | 25.0% |
| ! | TCAGTAAAATTCAATACCAA+AGG | - | tig0034029:7773-7792 | None:intergenic | 25.0% |
| ! | ATTCTCATATTTCTTACCAA+AGG | + | tig0034029:7800-7819 | Msa1452550:intron | 25.0% |
| !! | CTGAGTTTTTATCTTAATTC+AGG | + | tig0034029:7859-7878 | Msa1452550:intron | 25.0% |
| !!! | TTACAGAATTCTTGTTATTG+AGG | + | tig0034029:7970-7989 | Msa1452550:CDS | 25.0% |
| !! | TACAACAATAGAGGATATTT+TGG | + | tig0034029:8581-8600 | Msa1452550:intron | 25.0% |
| ! | ATAAGAAATTATCAGTTGAC+AGG | + | tig0034029:8717-8736 | Msa1452550:intron | 25.0% |
| ! | TAAGAAATTATCAGTTGACA+GGG | + | tig0034029:8718-8737 | Msa1452550:intron | 25.0% |
| !!! | TTTCCTTATTTTGTGGTTTT+AGG | - | tig0034029:8871-8890 | None:intergenic | 25.0% |
| !! | ATTGTACATATAACGGAAAA+AGG | + | tig0034029:8921-8940 | Msa1452550:intron | 25.0% |
| !! | TTGTACATATAACGGAAAAA+GGG | + | tig0034029:8922-8941 | Msa1452550:intron | 25.0% |
| ! | ATGTTGTGGAAAATGAAATA+AGG | + | tig0034029:9104-9123 | Msa1452550:intron | 25.0% |
| ! | GCAAAAGCTAAAATATAAAC+TGG | + | tig0034029:9381-9400 | Msa1452550:intron | 25.0% |
| ! | TTTAACTGCATCTCTTTATT+GGG | - | tig0034029:9481-9500 | None:intergenic | 25.0% |
| !!! | GATTCTTTTCAGTTTTATGA+TGG | + | tig0034029:9570-9589 | Msa1452550:intron | 25.0% |
| ! | TTCATCTATATACAGTTACA+AGG | + | tig0034029:9741-9760 | Msa1452550:intron | 25.0% |
| ! | CTGAAAAGTTTAGTTAACAT+TGG | + | tig0034029:9807-9826 | Msa1452550:intron | 25.0% |
| ! | TTTCTCTTCAATAAAACATC+AGG | + | tig0034029:9835-9854 | Msa1452550:intron | 25.0% |
| ! | TCAATATCCACAGAAATAAT+CGG | - | tig0034029:9987-10006 | None:intergenic | 25.0% |
| ! | ATTTCTGTGGATATTGAAAA+TGG | + | tig0034029:9990-10009 | Msa1452550:CDS | 25.0% |
| ! | GCAAAATCTCTTGAAAATTT+CGG | + | tig0034029:10031-10050 | Msa1452550:CDS | 25.0% |
| ! | CAAAATCTCTTGAAAATTTC+GGG | + | tig0034029:10032-10051 | Msa1452550:CDS | 25.0% |
| ! | AAATCACACTCAAATTGAAA+GGG | - | tig0034029:10157-10176 | None:intergenic | 25.0% |
| ! | AAAATCACACTCAAATTGAA+AGG | - | tig0034029:10158-10177 | None:intergenic | 25.0% |
| ! | ATAGAGAACTTAGTTTAACT+AGG | - | tig0034029:10521-10540 | None:intergenic | 25.0% |
| ! | TTAGTAGAATAGTATCTGAA+GGG | + | tig0034029:10667-10686 | Msa1452550:CDS | 25.0% |
| !!! | AGGTATTTTGATTCTATTAG+TGG | + | tig0034029:11031-11050 | Msa1452550:three_prime_UTR | 25.0% |
| !! | TTGGTTATGTATCTTAGTTT+TGG | + | tig0034029:11058-11077 | Msa1452550:three_prime_UTR | 25.0% |
| !!! | TGGTTATGTATCTTAGTTTT+GGG | + | tig0034029:11059-11078 | Msa1452550:three_prime_UTR | 25.0% |
| ! | ATAATTTTTGCCTTTGGACA+TGG | + | tig0034029:5038-5057 | Msa1452550:five_prime_UTR | 30.0% |
| ! | ATTGTTGTTGTTGTTGTTGA+GGG | - | tig0034029:5226-5245 | None:intergenic | 30.0% |
| ! | TATTGTTGTTGTTGTTGTTG+AGG | - | tig0034029:5227-5246 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | tig0034029:5797-5816 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTTAGCCTCTTTG+TGG | + | tig0034029:5983-6002 | Msa1452550:intron | 30.0% |
| ! | AATGCTTGAATTTTGCTTTC+AGG | + | tig0034029:6049-6068 | Msa1452550:intron | 30.0% |
| AGGAAATAGATGAAGTAGAA+GGG | + | tig0034029:6069-6088 | Msa1452550:intron | 30.0% | |
| GACAATATAATGCAATTTCC+TGG | + | tig0034029:6227-6246 | Msa1452550:CDS | 30.0% | |
| ACAACAAGATTAATACAACC+AGG | - | tig0034029:6248-6267 | None:intergenic | 30.0% | |
| TATCTTCAATCGACCAATAT+AGG | + | tig0034029:6330-6349 | Msa1452550:CDS | 30.0% | |
| !!! | TATTTGGAACTCTTTTTTGC+AGG | + | tig0034029:6492-6511 | Msa1452550:intron | 30.0% |
| ! | TTTCAATGTCTCACCAATTT+TGG | - | tig0034029:6724-6743 | None:intergenic | 30.0% |
| AGGTGCAAACACATAAATTA+TGG | - | tig0034029:6847-6866 | None:intergenic | 30.0% | |
| TTTGATGTTGTATAAAAGCC+TGG | + | tig0034029:6899-6918 | Msa1452550:intron | 30.0% | |
| GAGGCAATGTTGAAATTATA+TGG | + | tig0034029:7170-7189 | Msa1452550:intron | 30.0% | |
| !! | TATATGGTTCTAATTAGGGA+AGG | + | tig0034029:7186-7205 | Msa1452550:intron | 30.0% |
| AGGAGGAAAAAAGATAGTTA+AGG | + | tig0034029:7206-7225 | Msa1452550:intron | 30.0% | |
| ! | GTTAAGGCTAATTTTGTGTA+AGG | + | tig0034029:7222-7241 | Msa1452550:intron | 30.0% |
| !! | ATTTTTAAGCTTGTGCAGTT+GGG | - | tig0034029:7268-7287 | None:intergenic | 30.0% |
| ! | AGTATCGTGGATAATCTTTT+AGG | - | tig0034029:7309-7328 | None:intergenic | 30.0% |
| ATCGATACTCTAATGAAGTT+TGG | + | tig0034029:7358-7377 | Msa1452550:intron | 30.0% | |
| ! | ATTATGTATGCTTTGAATGG+AGG | + | tig0034029:7419-7438 | Msa1452550:intron | 30.0% |
| ! | TTATGTATGCTTTGAATGGA+GGG | + | tig0034029:7420-7439 | Msa1452550:intron | 30.0% |
| TTTCCATTCAACTTATCAGA+AGG | - | tig0034029:7703-7722 | None:intergenic | 30.0% | |
| ! | TCTGATAAGTTGAATGGAAA+AGG | + | tig0034029:7703-7722 | Msa1452550:intron | 30.0% |
| TCTAATGACTTTAGATGCTT+CGG | - | tig0034029:7906-7925 | None:intergenic | 30.0% | |
| ! | AGCATCTAAAGTCATTAGAA+AGG | + | tig0034029:7907-7926 | Msa1452550:CDS | 30.0% |
| !! | AGAATTCTTGTTATTGAGGA+AGG | + | tig0034029:7974-7993 | Msa1452550:CDS | 30.0% |
| GCAAAAGTCAATGCAATTAT+TGG | + | tig0034029:8178-8197 | Msa1452550:CDS | 30.0% | |
| TGTCCTAAAACCACAAAATA+AGG | + | tig0034029:8865-8884 | Msa1452550:intron | 30.0% | |
| !!! | GGATTCATTTCCTTATTTTG+TGG | - | tig0034029:8878-8897 | None:intergenic | 30.0% |
| TGAATCCTATTCCAGAATTA+AGG | + | tig0034029:8891-8910 | Msa1452550:intron | 30.0% | |
| !! | TTTCTCCTTAATTCTGGAAT+AGG | - | tig0034029:8899-8918 | None:intergenic | 30.0% |
| ! | CAATTGTTTCTCCTTAATTC+TGG | - | tig0034029:8905-8924 | None:intergenic | 30.0% |
| AGTATCATTTAGATGGTGAA+AGG | + | tig0034029:8985-9004 | Msa1452550:intron | 30.0% | |
| TGTGGAAAATGAAATAAGGA+TGG | + | tig0034029:9108-9127 | Msa1452550:intron | 30.0% | |
| CTTTAACTGCATCTCTTTAT+TGG | - | tig0034029:9482-9501 | None:intergenic | 30.0% | |
| CAATAAAGAGATGCAGTTAA+AGG | + | tig0034029:9480-9499 | Msa1452550:CDS | 30.0% | |
| ACCAGTTAATGAATCTAAGA+AGG | + | tig0034029:9593-9612 | Msa1452550:CDS | 30.0% | |
| !! | AATGAATCTAAGAAGGCATT+TGG | + | tig0034029:9600-9619 | Msa1452550:CDS | 30.0% |
| TAATTCCTTTGATCCATCAT+CGG | - | tig0034029:9631-9650 | None:intergenic | 30.0% | |
| !! | ATATCCTTTTAGCTAACCTT+GGG | - | tig0034029:9686-9705 | None:intergenic | 30.0% |
| TAAAAGGATATGAACCACAA+GGG | + | tig0034029:9695-9714 | Msa1452550:intron | 30.0% | |
| AATTTCTGCTCTTTAATGTG+TGG | + | tig0034029:10060-10079 | Msa1452550:intron | 30.0% | |
| ! | TGATTTTTGCTAGTGGAAAA+AGG | + | tig0034029:10171-10190 | Msa1452550:intron | 30.0% |
| ATATGCTATTGAACTTGAAG+AGG | + | tig0034029:10338-10357 | Msa1452550:CDS | 30.0% | |
| GTTAAACTAAGTTCTCTATC+TGG | + | tig0034029:10522-10541 | Msa1452550:CDS | 30.0% | |
| CTTAGTAGAATAGTATCTGA+AGG | + | tig0034029:10666-10685 | Msa1452550:CDS | 30.0% | |
| TAGTAGAATAGTATCTGAAG+GGG | + | tig0034029:10668-10687 | Msa1452550:CDS | 30.0% | |
| TGACAGAACAATTCTTCTTA+AGG | - | tig0034029:10862-10881 | None:intergenic | 30.0% | |
| TATGTTTAGAAGAACATCCT+TGG | + | tig0034029:10994-11013 | Msa1452550:three_prime_UTR | 30.0% | |
| !! | TGATTCTATTAGTGGATTCT+TGG | + | tig0034029:11039-11058 | Msa1452550:three_prime_UTR | 30.0% |
| TGAACTCGAGATTCTATAAT+TGG | + | tig0034029:11122-11141 | Msa1452550:three_prime_UTR | 30.0% | |
| AGCAAGTTATATCTTTGTAC+CGG | + | tig0034029:11228-11247 | Msa1452550:three_prime_UTR | 30.0% | |
| !! | GAAATGAGAAGTGTTAAGGT+TGG | - | tig0034029:5200-5219 | None:intergenic | 35.0% |
| AGGGTTGAGATTAAAACTCA+CGG | - | tig0034029:5362-5381 | None:intergenic | 35.0% | |
| AGAAGTGATTCAGTTATGGA+AGG | - | tig0034029:5446-5465 | None:intergenic | 35.0% | |
| CAAGAGAAGTGATTCAGTTA+TGG | - | tig0034029:5450-5469 | None:intergenic | 35.0% | |
| ! | CTGGATTCAGTTCTAATGTA+TGG | + | tig0034029:5626-5645 | Msa1452550:intron | 35.0% |
| GTTCAAATAAGTCAATCCAG+AGG | - | tig0034029:5671-5690 | None:intergenic | 35.0% | |
| CAGGAAATAGATGAAGTAGA+AGG | + | tig0034029:6068-6087 | Msa1452550:intron | 35.0% | |
| GGAAATAGATGAAGTAGAAG+GGG | + | tig0034029:6070-6089 | Msa1452550:intron | 35.0% | |
| TATCAAGTGGATCATGATCT+AGG | - | tig0034029:6151-6170 | None:intergenic | 35.0% | |
| !! | ATAGCTTGTTCTCTATCAAG+TGG | - | tig0034029:6164-6183 | None:intergenic | 35.0% |
| ACTCTTTGGCAATATTCACT+TGG | + | tig0034029:6188-6207 | Msa1452550:CDS | 35.0% | |
| TTGAAGATAGTGATTGCAGA+AGG | - | tig0034029:6319-6338 | None:intergenic | 35.0% | |
| CTGCTACAGAATTCCTATAT+TGG | - | tig0034029:6346-6365 | None:intergenic | 35.0% | |
| !!! | GAACTCTTTTTTGCAGGTAA+AGG | + | tig0034029:6498-6517 | Msa1452550:intron | 35.0% |
| ! | CGCTCTTTGCAATTTTTACT+CGG | - | tig0034029:6570-6589 | None:intergenic | 35.0% |
| !! | TATGAAGTACCTTGATGATG+AGG | + | tig0034029:6606-6625 | Msa1452550:CDS | 35.0% |
| CTTTCATATCCTCATCATCA+AGG | - | tig0034029:6618-6637 | None:intergenic | 35.0% | |
| TGATGAGGATATGAAAGTGA+AGG | + | tig0034029:6621-6640 | Msa1452550:CDS | 35.0% | |
| !! | AGCAGGTGTTATTCCAAAAT+TGG | + | tig0034029:6708-6727 | Msa1452550:CDS | 35.0% |
| ATTGGTGAGACATTGAAAGA+TGG | + | tig0034029:6726-6745 | Msa1452550:intron | 35.0% | |
| CACCTAAAACATTATGCTCT+CGG | + | tig0034029:6862-6881 | Msa1452550:intron | 35.0% | |
| ACCTAAAACATTATGCTCTC+GGG | + | tig0034029:6863-6882 | Msa1452550:intron | 35.0% | |
| !!! | AGGAACTTGGCAGTTTTTTT+TGG | + | tig0034029:6939-6958 | Msa1452550:intron | 35.0% |
| !!! | TTGGCAGTTTTTTTTGGAGA+GGG | + | tig0034029:6945-6964 | Msa1452550:intron | 35.0% |
| ACATAAGCTACCTTCTATAG+TGG | + | tig0034029:6972-6991 | Msa1452550:intron | 35.0% | |
| ACGTTCCTATAGAAAATACG+AGG | + | tig0034029:7069-7088 | Msa1452550:intron | 35.0% | |
| ! | TGGATCCTCGTATTTTCTAT+AGG | - | tig0034029:7077-7096 | None:intergenic | 35.0% |
| TATAGAAAATACGAGGATCC+AGG | + | tig0034029:7076-7095 | Msa1452550:intron | 35.0% | |
| ACTCATGATTCTATGCAAGT+TGG | + | tig0034029:7106-7125 | Msa1452550:intron | 35.0% | |
| GAGTCTATTTGGTCTATTCA+TGG | + | tig0034029:7132-7151 | Msa1452550:intron | 35.0% | |
| !! | GATTTTTAAGCTTGTGCAGT+TGG | - | tig0034029:7269-7288 | None:intergenic | 35.0% |
| ! | TATGTATGCTTTGAATGGAG+GGG | + | tig0034029:7421-7440 | Msa1452550:intron | 35.0% |
| TTCTGTTGAGATTTAGGGAT+CGG | - | tig0034029:7665-7684 | None:intergenic | 35.0% | |
| ! | TGTTCTAAGCATCAAGAGAA+AGG | - | tig0034029:7827-7846 | None:intergenic | 35.0% |
| AAGTCATTAGAAAGGAAGCA+AGG | + | tig0034029:7915-7934 | Msa1452550:CDS | 35.0% | |
| ! | TTAGTTCCTGTGCCATTAAT+AGG | + | tig0034029:7998-8017 | Msa1452550:CDS | 35.0% |
| ACATATGCGTATTGCATTCA+AGG | + | tig0034029:8408-8427 | Msa1452550:CDS | 35.0% | |
| ! | ATCCGATTGATAACCATTCT+AGG | + | tig0034029:8824-8843 | Msa1452550:intron | 35.0% |
| ! | TCCGATTGATAACCATTCTA+GGG | + | tig0034029:8825-8844 | Msa1452550:intron | 35.0% |
| ACCCTAGAATGGTTATCAAT+CGG | - | tig0034029:8829-8848 | None:intergenic | 35.0% | |
| !! | TGATAACCATTCTAGGGTTA+AGG | + | tig0034029:8831-8850 | Msa1452550:intron | 35.0% |
| !! | GATAACCATTCTAGGGTTAA+GGG | + | tig0034029:8832-8851 | Msa1452550:intron | 35.0% |
| TATTTCCCTTAACCCTAGAA+TGG | - | tig0034029:8840-8859 | None:intergenic | 35.0% | |
| GTACAGCAGTATCATTTAGA+TGG | + | tig0034029:8978-8997 | Msa1452550:intron | 35.0% | |
| AAGCCAACCATTGCATAATA+CGG | + | tig0034029:9078-9097 | Msa1452550:intron | 35.0% | |
| ACATCATCCGTATTATGCAA+TGG | - | tig0034029:9088-9107 | None:intergenic | 35.0% | |
| GCCTTCTTAGATTCATTAAC+TGG | - | tig0034029:9597-9616 | None:intergenic | 35.0% | |
| !!! | CCTTGGGTTTGTTTTTGATA+CGG | - | tig0034029:9670-9689 | None:intergenic | 35.0% |
| !! | CATATCCTTTTAGCTAACCT+TGG | - | tig0034029:9687-9706 | None:intergenic | 35.0% |
| CTAAAAGGATATGAACCACA+AGG | + | tig0034029:9694-9713 | Msa1452550:intron | 35.0% | |
| CAAAAAAACCTATACCCTTG+TGG | - | tig0034029:9712-9731 | None:intergenic | 35.0% | |
| TTCTTGTAAACTGGGTAAAG+AGG | - | tig0034029:9913-9932 | None:intergenic | 35.0% | |
| ! | TTGAGTGTGATTTTTGCTAG+TGG | + | tig0034029:10164-10183 | Msa1452550:intron | 35.0% |
| ATTCTTTAGCACCACTTACA+TGG | + | tig0034029:10212-10231 | Msa1452550:intron | 35.0% | |
| ATAAATCCCTCCCATTTCAT+TGG | + | tig0034029:10432-10451 | Msa1452550:CDS | 35.0% | |
| ! | TATGGGACTTGAGAATTTTG+CGG | - | tig0034029:10464-10483 | None:intergenic | 35.0% |
| TTGATCTGTTCTACAAGTCT+TGG | - | tig0034029:10603-10622 | None:intergenic | 35.0% | |
| ! | TTCATTCTCTTTAGAAGCAC+AGG | + | tig0034029:10626-10645 | Msa1452550:CDS | 35.0% |
| TTCCACAGGAGCTATTATTT+CGG | + | tig0034029:10698-10717 | Msa1452550:CDS | 35.0% | |
| ATTGAAGAAGGTAGTGAAAG+AGG | + | tig0034029:10750-10769 | Msa1452550:CDS | 35.0% | |
| GAACAATTCTTCTTAAGGCT+GGG | - | tig0034029:10857-10876 | None:intergenic | 35.0% | |
| AGAACAATTCTTCTTAAGGC+TGG | - | tig0034029:10858-10877 | None:intergenic | 35.0% | |
| TGTTTAAAGATTCCTTCCCA+TGG | - | tig0034029:10944-10963 | None:intergenic | 35.0% | |
| ! | CCTTTTACAAATAAGGACCA+AGG | - | tig0034029:11014-11033 | None:intergenic | 35.0% |
| ! | CCTTGGTCCTTATTTGTAAA+AGG | + | tig0034029:11011-11030 | Msa1452550:three_prime_UTR | 35.0% |
| !!! | CTATCTTGTTTTCCGACGAA+GGG | + | tig0034029:5076-5095 | Msa1452550:five_prime_UTR | 40.0% |
| !! | ATGAGAAGTGTTAAGGTTGG+AGG | - | tig0034029:5197-5216 | None:intergenic | 40.0% |
| ACTCGTAGTTGCAGCAATAA+CGG | + | tig0034029:5304-5323 | Msa1452550:CDS | 40.0% | |
| GTTGAGATTAAAACTCACGG+GGG | - | tig0034029:5359-5378 | None:intergenic | 40.0% | |
| GGTTGAGATTAAAACTCACG+GGG | - | tig0034029:5360-5379 | None:intergenic | 40.0% | |
| GGGTTGAGATTAAAACTCAC+GGG | - | tig0034029:5361-5380 | None:intergenic | 40.0% | |
| AACTGAACTGAAGCAAAAGG+TGG | - | tig0034029:5418-5437 | None:intergenic | 40.0% | |
| CTGAACTGAACTGAAGCAAA+AGG | - | tig0034029:5421-5440 | None:intergenic | 40.0% | |
| !! | TATGGTATGCTCGCTGTTTT+AGG | + | tig0034029:5644-5663 | Msa1452550:intron | 40.0% |
| !! | ATGGTATGCTCGCTGTTTTA+GGG | + | tig0034029:5645-5664 | Msa1452550:intron | 40.0% |
| GGTATTGTGAACAAACAGCA+CGG | + | tig0034029:5931-5950 | Msa1452550:intron | 40.0% | |
| GACTTGAGTTTAGGCAACTA+TGG | + | tig0034029:5953-5972 | Msa1452550:intron | 40.0% | |
| GTTTAGGCAACTATGGAGAT+AGG | + | tig0034029:5960-5979 | Msa1452550:intron | 40.0% | |
| AACACAGACAAACCACAAAG+AGG | - | tig0034029:5998-6017 | None:intergenic | 40.0% | |
| CTTTGGCAATATTCACTTGG+TGG | + | tig0034029:6191-6210 | Msa1452550:CDS | 40.0% | |
| !! | AACTAGATTCTGCTCTAAGG+AGG | - | tig0034029:6274-6293 | None:intergenic | 40.0% |
| CCTTAGAGCAGAATCTAGTT+CGG | + | tig0034029:6274-6293 | Msa1452550:CDS | 40.0% | |
| AGGAATTCTGTAGCAGATAG+TGG | + | tig0034029:6350-6369 | Msa1452550:CDS | 40.0% | |
| ATTGCTGACACAATCTTCCT+TGG | + | tig0034029:6394-6413 | Msa1452550:CDS | 40.0% | |
| CCATGATGTCATGGTTAACA+TGG | - | tig0034029:6684-6703 | None:intergenic | 40.0% | |
| CCATGTTAACCATGACATCA+TGG | + | tig0034029:6681-6700 | Msa1452550:CDS | 40.0% | |
| !! | TCCCGAGAGCATAATGTTTT+AGG | - | tig0034029:6867-6886 | None:intergenic | 40.0% |
| !!! | CTTGGCAGTTTTTTTTGGAG+AGG | + | tig0034029:6944-6963 | Msa1452550:intron | 40.0% |
| GAATCATGAGTCAATCTTCC+TGG | - | tig0034029:7097-7116 | None:intergenic | 40.0% | |
| ! | CAAGTTGGAACGAGTCTATT+TGG | + | tig0034029:7121-7140 | Msa1452550:intron | 40.0% |
| ! | ATGGTAGTGCTTTGACTTTG+AGG | + | tig0034029:7151-7170 | Msa1452550:intron | 40.0% |
| !! | ATGGTTCTAATTAGGGAAGG+AGG | + | tig0034029:7189-7208 | Msa1452550:intron | 40.0% |
| ! | GCTAATTTTGTGTAAGGACG+TGG | + | tig0034029:7228-7247 | Msa1452550:intron | 40.0% |
| GATTAATACTGAAGCCTTCC+TGG | + | tig0034029:7479-7498 | Msa1452550:intron | 40.0% | |
| AACTAGAACCTTTGTTGACC+AGG | - | tig0034029:7500-7519 | None:intergenic | 40.0% | |
| ! | GTGCCTTCTGATAAGTTGAA+TGG | + | tig0034029:7697-7716 | Msa1452550:intron | 40.0% |
| TTAGATGCTTCGGAGTCATA+TGG | - | tig0034029:7896-7915 | None:intergenic | 40.0% | |
| TGCATTGCTAGAACTTGTGA+AGG | + | tig0034029:7940-7959 | Msa1452550:CDS | 40.0% | |
| ! | ACGTGGGTTGTATGACTTAT+AGG | - | tig0034029:8032-8051 | None:intergenic | 40.0% |
| ATACAACCCACGTTTATACG+AGG | + | tig0034029:8039-8058 | Msa1452550:CDS | 40.0% | |
| TCTGATGCGCCAAATTTAGA+AGG | - | tig0034029:8112-8131 | None:intergenic | 40.0% | |
| CAACAATTCCTTGTTCGTGT+TGG | + | tig0034029:8211-8230 | Msa1452550:CDS | 40.0% | |
| !! | TCGTGTTGGTGCTATTGAAA+TGG | + | tig0034029:8225-8244 | Msa1452550:CDS | 40.0% |
| TATGCGTATTGCATTCAAGG+AGG | + | tig0034029:8411-8430 | Msa1452550:CDS | 40.0% | |
| GTGCAGTTAGGCATTTAGTA+CGG | + | tig0034029:8437-8456 | Msa1452550:CDS | 40.0% | |
| CATCCGTATTATGCAATGGT+TGG | - | tig0034029:9084-9103 | None:intergenic | 40.0% | |
| GCATAATACGGATGATGTTG+TGG | + | tig0034029:9090-9109 | Msa1452550:intron | 40.0% | |
| !! | AATAAGGATGGCTTTGACAG+TGG | + | tig0034029:9120-9139 | Msa1452550:intron | 40.0% |
| !! | ATAAGGATGGCTTTGACAGT+GGG | + | tig0034029:9121-9140 | Msa1452550:intron | 40.0% |
| !! | GAATCTAAGAAGGCATTTGG+TGG | + | tig0034029:9603-9622 | Msa1452550:CDS | 40.0% |
| !! | TGTTTTTGATACGGCTTGCT+CGG | - | tig0034029:9661-9680 | None:intergenic | 40.0% |
| CCGTATCAAAAACAAACCCA+AGG | + | tig0034029:9667-9686 | Msa1452550:CDS | 40.0% | |
| ! | CAAACCCAAGGTTAGCTAAA+AGG | + | tig0034029:9679-9698 | Msa1452550:intron | 40.0% |
| ! | GATATGAACCACAAGGGTAT+AGG | + | tig0034029:9701-9720 | Msa1452550:intron | 40.0% |
| AGGACTTCAAAATCTCCACA+AGG | - | tig0034029:9893-9912 | None:intergenic | 40.0% | |
| !! | GCGGCTTTTTCTTGTAAACT+GGG | - | tig0034029:9921-9940 | None:intergenic | 40.0% |
| !! | TGCGGCTTTTTCTTGTAAAC+TGG | - | tig0034029:9922-9941 | None:intergenic | 40.0% |
| CACAAACTCAAGAACAGATG+CGG | - | tig0034029:9940-9959 | None:intergenic | 40.0% | |
| GAAATAATCGGACTCAGTGT+TGG | - | tig0034029:9975-9994 | None:intergenic | 40.0% | |
| !! | ACTGAGTCCGATTATTTCTG+TGG | + | tig0034029:9977-9996 | Msa1452550:CDS | 40.0% |
| GAAGATTAGTGCCATGTAAG+TGG | - | tig0034029:10226-10245 | None:intergenic | 40.0% | |
| ! | AGTGTAACTTCTGCGTTGAT+CGG | - | tig0034029:10567-10586 | None:intergenic | 40.0% |
| ! | CTCTTTAGAAGCACAGGAAA+AGG | + | tig0034029:10632-10651 | Msa1452550:CDS | 40.0% |
| TAGAATAGTATCTGAAGGGG+TGG | + | tig0034029:10671-10690 | Msa1452550:CDS | 40.0% | |
| TTCCGAAATAATAGCTCCTG+TGG | - | tig0034029:10703-10722 | None:intergenic | 40.0% | |
| ACAGGAGCTATTATTTCGGA+AGG | + | tig0034029:10702-10721 | Msa1452550:CDS | 40.0% | |
| CAGGAGCTATTATTTCGGAA+GGG | + | tig0034029:10703-10722 | Msa1452550:CDS | 40.0% | |
| AGGAGCTATTATTTCGGAAG+GGG | + | tig0034029:10704-10723 | Msa1452550:CDS | 40.0% | |
| TTGGTGAAGCTGATTGAAGA+AGG | + | tig0034029:10738-10757 | Msa1452550:CDS | 40.0% | |
| TTCTGTCAGAAAAACCACAG+TGG | + | tig0034029:10874-10893 | Msa1452550:CDS | 40.0% | |
| AGAAAAACCACAGTGGCAAA+GGG | + | tig0034029:10881-10900 | Msa1452550:CDS | 40.0% | |
| ACTTCATTTGCTCAGGAGTT+TGG | + | tig0034029:10905-10924 | Msa1452550:CDS | 40.0% | |
| !!! | TCTTAGTTTTGGGTCAGTTG+AGG | + | tig0034029:11069-11088 | Msa1452550:three_prime_UTR | 40.0% |
| !!! | CTTAGTTTTGGGTCAGTTGA+GGG | + | tig0034029:11070-11089 | Msa1452550:three_prime_UTR | 40.0% |
| TTGCCTTTGGACATGGTCTA+AGG | + | tig0034029:5045-5064 | Msa1452550:five_prime_UTR | 45.0% | |
| TGCCTTTGGACATGGTCTAA+GGG | + | tig0034029:5046-5065 | Msa1452550:five_prime_UTR | 45.0% | |
| CCTTCGTCGGAAAACAAGAT+AGG | - | tig0034029:5078-5097 | None:intergenic | 45.0% | |
| !!! | CCTATCTTGTTTTCCGACGA+AGG | + | tig0034029:5075-5094 | Msa1452550:five_prime_UTR | 45.0% |
| !! | AGGAAGAGGGTGTTAGGATT+GGG | - | tig0034029:5177-5196 | None:intergenic | 45.0% |
| GTGTTAAGGTTGGAGGAAGA+GGG | - | tig0034029:5190-5209 | None:intergenic | 45.0% | |
| AGTGTTAAGGTTGGAGGAAG+AGG | - | tig0034029:5191-5210 | None:intergenic | 45.0% | |
| !! | GCGCGAAATGAGAAGTGTTA+AGG | - | tig0034029:5204-5223 | None:intergenic | 45.0% |
| AACAGCACGGACTTGAGTTT+AGG | + | tig0034029:5944-5963 | Msa1452550:intron | 45.0% | |
| GGGGAATCATCTTCTGACTT+TGG | + | tig0034029:6089-6108 | Msa1452550:CDS | 45.0% | |
| ! | TGACTTTGGTGATAGCTACG+TGG | + | tig0034029:6103-6122 | Msa1452550:CDS | 45.0% |
| !! | GCCTTGTTTGTTCGTATGCT+AGG | + | tig0034029:6125-6144 | Msa1452550:CDS | 45.0% |
| GCCTAGCATACGAACAAACA+AGG | - | tig0034029:6129-6148 | None:intergenic | 45.0% | |
| CCGAACTAGATTCTGCTCTA+AGG | - | tig0034029:6277-6296 | None:intergenic | 45.0% | |
| ! | AGAATCTAGTTCGGCTTGTG+AGG | + | tig0034029:6283-6302 | Msa1452550:CDS | 45.0% |
| ACAATCTTCCTTGGCTTCTG+AGG | + | tig0034029:6403-6422 | Msa1452550:CDS | 45.0% | |
| !! | TTCCTTGGCTTCTGAGGTAT+AGG | + | tig0034029:6409-6428 | Msa1452550:intron | 45.0% |
| TTCCTATACCTCAGAAGCCA+AGG | - | tig0034029:6414-6433 | None:intergenic | 45.0% | |
| CTGCTTCAACCATGATGTCA+TGG | - | tig0034029:6693-6712 | None:intergenic | 45.0% | |
| CATGACATCATGGTTGAAGC+AGG | + | tig0034029:6691-6710 | Msa1452550:CDS | 45.0% | |
| CATAAGCAGGCCACTATAGA+AGG | - | tig0034029:6985-7004 | None:intergenic | 45.0% | |
| TTCCTGCTCAAGAGTTGTGT+TGG | + | tig0034029:7020-7039 | Msa1452550:intron | 45.0% | |
| AACCAACACAACTCTTGAGC+AGG | - | tig0034029:7025-7044 | None:intergenic | 45.0% | |
| AGAACCTTTGTTGACCAGGA+AGG | - | tig0034029:7496-7515 | None:intergenic | 45.0% | |
| GTTGAGATTTAGGGATCGGA+TGG | - | tig0034029:7661-7680 | None:intergenic | 45.0% | |
| GCATCAAGAGAAAGGACCTT+TGG | - | tig0034029:7819-7838 | None:intergenic | 45.0% | |
| TAGGCTGCAGCACCTATTAA+TGG | - | tig0034029:8013-8032 | None:intergenic | 45.0% | |
| CTTTCGATTTCTGTGCCATC+TGG | - | tig0034029:8076-8095 | None:intergenic | 45.0% | |
| CAGATGGCACAGAAATCGAA+AGG | + | tig0034029:8074-8093 | Msa1452550:CDS | 45.0% | |
| !! | GGCGCATCAGAAGTACTTAT+TGG | + | tig0034029:8121-8140 | Msa1452550:CDS | 45.0% |
| CAATAGCACCAACACGAACA+AGG | - | tig0034029:8222-8241 | None:intergenic | 45.0% | |
| ACACTCTTGCATTGGATCGA+CGG | + | tig0034029:8295-8314 | Msa1452550:CDS | 45.0% | |
| ! | CAATGATAATGCAGTCCAGC+TGG | + | tig0034029:8471-8490 | Msa1452550:CDS | 45.0% |
| ! | CTTTGGAAAAGCTGTCTGCT+AGG | + | tig0034029:8506-8525 | Msa1452550:CDS | 45.0% |
| CAGTTGACAGGGAGAAAAGA+TGG | + | tig0034029:8729-8748 | Msa1452550:intron | 45.0% | |
| TAAAGGAGCTAAACCACCCT+CGG | - | tig0034029:9275-9294 | None:intergenic | 45.0% | |
| TTAAATCGCTCAGACGTAGC+TGG | + | tig0034029:9304-9323 | Msa1452550:CDS | 45.0% | |
| CGCATCTGTTCTTGAGTTTG+TGG | + | tig0034029:9938-9957 | Msa1452550:CDS | 45.0% | |
| GCTATTGAACTTGAAGAGGC+CGG | + | tig0034029:10342-10361 | Msa1452550:CDS | 45.0% | |
| TGCTGCAGATATTGCAAGAC+CGG | - | tig0034029:10364-10383 | None:intergenic | 45.0% | |
| ! | ATTCAGCACTTCTAGCTGCT+GGG | + | tig0034029:10826-10845 | Msa1452550:CDS | 45.0% |
| CAGAAAAACCACAGTGGCAA+AGG | + | tig0034029:10880-10899 | Msa1452550:CDS | 45.0% | |
| !! | AAAGGGCACTTCATTTGCTC+AGG | + | tig0034029:10898-10917 | Msa1452550:CDS | 45.0% |
| TTGGAAACATGACGAGTCCA+TGG | + | tig0034029:10924-10943 | Msa1452550:exon | 45.0% | |
| TGGAAACATGACGAGTCCAT+GGG | + | tig0034029:10925-10944 | Msa1452550:exon | 45.0% | |
| AGTTGAGGGCAAAGTCTACT+TGG | + | tig0034029:11084-11103 | Msa1452550:three_prime_UTR | 45.0% | |
| GTTGAGGGCAAAGTCTACTT+GGG | + | tig0034029:11085-11104 | Msa1452550:three_prime_UTR | 45.0% | |
| GCCTTTGGACATGGTCTAAG+GGG | + | tig0034029:5047-5066 | Msa1452550:five_prime_UTR | 50.0% | |
| CCTTTGGACATGGTCTAAGG+GGG | + | tig0034029:5048-5067 | Msa1452550:five_prime_UTR | 50.0% | |
| ! | TTGTTTTCCGACGAAGGGTC+TGG | + | tig0034029:5081-5100 | Msa1452550:five_prime_UTR | 50.0% |
| !! | GAGGAAGAGGGTGTTAGGAT+TGG | - | tig0034029:5178-5197 | None:intergenic | 50.0% |
| ! | AGGGAGTTTGGAAGAGTACG+AGG | - | tig0034029:5269-5288 | None:intergenic | 50.0% |
| GAGTGAACCTGGCAAAGAGA+GGG | - | tig0034029:5288-5307 | None:intergenic | 50.0% | |
| ATTAAAACTCACGGGGGAGG+CGG | - | tig0034029:5353-5372 | None:intergenic | 50.0% | |
| GAGATTAAAACTCACGGGGG+AGG | - | tig0034029:5356-5375 | None:intergenic | 50.0% | |
| ATCTTCACTCGCTTCGTGAG+TGG | + | tig0034029:5883-5902 | Msa1452550:intron | 50.0% | |
| GAAAGTGAAGGAAGCTGCAG+CGG | + | tig0034029:6633-6652 | Msa1452550:CDS | 50.0% | |
| AAAGTGAAGGAAGCTGCAGC+GGG | + | tig0034029:6634-6653 | Msa1452550:CDS | 50.0% | |
| AAGTTCCTACAGAGCAGGAG+AGG | - | tig0034029:6927-6946 | None:intergenic | 50.0% | |
| TCTCCTGCTCTGTAGGAACT+TGG | + | tig0034029:6926-6945 | Msa1452550:intron | 50.0% | |
| GAAGCCTTCCTGGTCAACAA+AGG | + | tig0034029:7489-7508 | Msa1452550:intron | 50.0% | |
| GCAGCACCTATTAATGGCAC+AGG | - | tig0034029:8007-8026 | None:intergenic | 50.0% | |
| TCTGTGCCATCTGGAAATGC+AGG | - | tig0034029:8067-8086 | None:intergenic | 50.0% | |
| CGTATTGCATTCAAGGAGGC+TGG | + | tig0034029:8415-8434 | Msa1452550:CDS | 50.0% | |
| TTGCCGAGTGATTGAAACCG+AGG | + | tig0034029:9255-9274 | Msa1452550:CDS | 50.0% | |
| TGCCGAGTGATTGAAACCGA+GGG | + | tig0034029:9256-9275 | Msa1452550:CDS | 50.0% | |
| CACCCTCGGTTTCAATCACT+CGG | - | tig0034029:9261-9280 | None:intergenic | 50.0% | |
| AGACGTAGCTGGAGCTATTG+CGG | + | tig0034029:9315-9334 | Msa1452550:CDS | 50.0% | |
| AGCTGGAGCTATTGCGGAAA+AGG | + | tig0034029:9321-9340 | Msa1452550:CDS | 50.0% | |
| !! | TGGAGCCGATGATGGATCAA+AGG | + | tig0034029:9623-9642 | Msa1452550:CDS | 50.0% |
| ! | AGTTTTCACTGCACGCCTTG+TGG | + | tig0034029:9875-9894 | Msa1452550:CDS | 50.0% |
| AGCAGAGACAGAATCTGACG+TGG | + | tig0034029:10296-10315 | Msa1452550:intron | 50.0% | |
| AGCGTGCCAATGAAATGGGA+GGG | - | tig0034029:10441-10460 | None:intergenic | 50.0% | |
| TTTGCTGCGGAGGGGAATAT+GGG | - | tig0034029:10481-10500 | None:intergenic | 50.0% | |
| TACCCAATCTTTGCTGCGGA+GGG | - | tig0034029:10490-10509 | None:intergenic | 50.0% | |
| CAGCTACCCAATCTTTGCTG+CGG | - | tig0034029:10494-10513 | None:intergenic | 50.0% | |
| GGAAGGGGCTGTGTATTCTT+TGG | + | tig0034029:10719-10738 | Msa1452550:CDS | 50.0% | |
| !! | CAGCAGCTAGAAGTGCTGAA+TGG | - | tig0034029:10827-10846 | None:intergenic | 50.0% |
| ! | CATTCAGCACTTCTAGCTGC+TGG | + | tig0034029:10825-10844 | Msa1452550:CDS | 50.0% |
| ! | TTCAGCACTTCTAGCTGCTG+GGG | + | tig0034029:10827-10846 | Msa1452550:CDS | 50.0% |
| AACATGACGAGTCCATGGGA+AGG | + | tig0034029:10929-10948 | Msa1452550:exon | 50.0% | |
| !! | AACCAGTCATCGACTCACAC+CGG | - | tig0034029:11250-11269 | None:intergenic | 50.0% |
| CCCCCTTAGACCATGTCCAA+AGG | - | tig0034029:5051-5070 | None:intergenic | 55.0% | |
| TCCAGTTCCAGACCCTTCGT+CGG | - | tig0034029:5091-5110 | None:intergenic | 55.0% | |
| !! | GGTTGGAGGAAGAGGGTGTT+AGG | - | tig0034029:5183-5202 | None:intergenic | 55.0% |
| CGAGGAAGAGAGAGTGACTC+TGG | - | tig0034029:5251-5270 | None:intergenic | 55.0% | |
| CCTGGCAAAGAGAGGGAGTT+TGG | - | tig0034029:5281-5300 | None:intergenic | 55.0% | |
| CCAAACTCCCTCTCTTTGCC+AGG | + | tig0034029:5278-5297 | Msa1452550:CDS | 55.0% | |
| CGAGTGAACCTGGCAAAGAG+AGG | - | tig0034029:5289-5308 | None:intergenic | 55.0% | |
| GCTGCAACTACGAGTGAACC+TGG | - | tig0034029:5299-5318 | None:intergenic | 55.0% | |
| GGTCATTCTGATCACTCCGC+TGG | + | tig0034029:5325-5344 | Msa1452550:CDS | 55.0% | |
| TTAAAACTCACGGGGGAGGC+GGG | - | tig0034029:5352-5371 | None:intergenic | 55.0% | |
| ! | GGAAGCTGCAGCGGGTATTT+TGG | + | tig0034029:6642-6661 | Msa1452550:CDS | 55.0% |
| TACAGAGCAGGAGAGGATCC+AGG | - | tig0034029:6920-6939 | None:intergenic | 55.0% | |
| TGGATCCTCTCCTGCTCTGT+AGG | + | tig0034029:6919-6938 | Msa1452550:intron | 55.0% | |
| CTGCCAAGTTCCTACAGAGC+AGG | - | tig0034029:6932-6951 | None:intergenic | 55.0% | |
| CAGGCGCCTCGTATAAACGT+GGG | - | tig0034029:8048-8067 | None:intergenic | 55.0% | |
| CGCGTCTGACACTCTTGCAT+TGG | + | tig0034029:8287-8306 | Msa1452550:CDS | 55.0% | |
| TCAAGGAGGCTGGTGCAGTT+AGG | + | tig0034029:8425-8444 | Msa1452550:CDS | 55.0% | |
| CGAGTGATTGAAACCGAGGG+TGG | + | tig0034029:9259-9278 | Msa1452550:CDS | 55.0% | |
| ! | GCATTTGGTGGAGCCGATGA+TGG | + | tig0034029:9615-9634 | Msa1452550:CDS | 55.0% |
| GAGCGTGCCAATGAAATGGG+AGG | - | tig0034029:10442-10461 | None:intergenic | 55.0% | |
| GCGGAGCGTGCCAATGAAAT+GGG | - | tig0034029:10445-10464 | None:intergenic | 55.0% | |
| TGCGGAGCGTGCCAATGAAA+TGG | - | tig0034029:10446-10465 | None:intergenic | 55.0% | |
| CTTTGCTGCGGAGGGGAATA+TGG | - | tig0034029:10482-10501 | None:intergenic | 55.0% | |
| TTCCCCTCCGCAGCAAAGAT+TGG | + | tig0034029:10484-10503 | Msa1452550:CDS | 55.0% | |
| TCCCCTCCGCAGCAAAGATT+GGG | + | tig0034029:10485-10504 | Msa1452550:CDS | 55.0% | |
| ACCCAATCTTTGCTGCGGAG+GGG | - | tig0034029:10489-10508 | None:intergenic | 55.0% | |
| CTACCCAATCTTTGCTGCGG+AGG | - | tig0034029:10491-10510 | None:intergenic | 55.0% | |
| GAAGGGGTGGTAGATTCCAC+AGG | + | tig0034029:10684-10703 | Msa1452550:CDS | 55.0% | |
| ! | TGAAGTGCCCTTTGCCACTG+TGG | - | tig0034029:10891-10910 | None:intergenic | 55.0% |
| TACCGGTGTGAGTCGATGAC+TGG | + | tig0034029:11245-11264 | Msa1452550:three_prime_UTR | 55.0% | |
| ! | TCCGACGAAGGGTCTGGAAC+TGG | + | tig0034029:5087-5106 | Msa1452550:five_prime_UTR | 60.0% |
| !!! | GCTCGCTGTTTTAGGGCCTC+TGG | + | tig0034029:5652-5671 | Msa1452550:intron | 60.0% |
| GCAGGCGCCTCGTATAAACG+TGG | - | tig0034029:8049-8068 | None:intergenic | 60.0% | |
| ! | GAGGCGCCTGCATTTCCAGA+TGG | + | tig0034029:8058-8077 | Msa1452550:CDS | 60.0% |
| ! | TCGGCTTGTGAGGCAGCTGC+AGG | + | tig0034029:6293-6312 | Msa1452550:CDS | 65.0% |
| AAGCTTGCGTCGCTGCCAGC+TGG | - | tig0034029:8489-8508 | None:intergenic | 65.0% | |
| GCTGGCAGCGACGCAAGCTT+TGG | + | tig0034029:8489-8508 | Msa1452550:CDS | 65.0% | |
| ! | CACGGGGGAGGCGGGACCAG+CGG | - | tig0034029:5344-5363 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034029 | gene | 5017 | 11274 | 5017 | ID=Msa1452550;Name=Msa1452550 |
| tig0034029 | mRNA | 5017 | 11274 | 5017 | ID=Msa1452550-mRNA-1;Parent=Msa1452550;Name=Msa1452550-mRNA-1;_AED=0.06;_eAED=0.06;_QI=137|1|1|1|1|1|9|339|838 |
| tig0034029 | exon | 5017 | 5360 | 5017 | ID=Msa1452550-mRNA-1:exon:18667;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 6071 | 6424 | 6071 | ID=Msa1452550-mRNA-1:exon:18668;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 6514 | 6729 | 6514 | ID=Msa1452550-mRNA-1:exon:18669;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 7881 | 8527 | 7881 | ID=Msa1452550-mRNA-1:exon:18670;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 9246 | 9342 | 9246 | ID=Msa1452550-mRNA-1:exon:18671;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 9448 | 9501 | 9448 | ID=Msa1452550-mRNA-1:exon:18672;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 9582 | 9688 | 9582 | ID=Msa1452550-mRNA-1:exon:18673;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 9857 | 10053 | 9857 | ID=Msa1452550-mRNA-1:exon:18674;Parent=Msa1452550-mRNA-1 |
| tig0034029 | exon | 10298 | 11274 | 10298 | ID=Msa1452550-mRNA-1:exon:18675;Parent=Msa1452550-mRNA-1 |
| tig0034029 | five_prime_UTR | 5017 | 5153 | 5017 | ID=Msa1452550-mRNA-1:five_prime_utr;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 5154 | 5360 | 5154 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 6071 | 6424 | 6071 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 6514 | 6729 | 6514 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 7881 | 8527 | 7881 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 9246 | 9342 | 9246 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 9448 | 9501 | 9448 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 9582 | 9688 | 9582 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 9857 | 10053 | 9857 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | CDS | 10298 | 10935 | 10298 | ID=Msa1452550-mRNA-1:cds;Parent=Msa1452550-mRNA-1 |
| tig0034029 | three_prime_UTR | 10936 | 11274 | 10936 | ID=Msa1452550-mRNA-1:three_prime_utr;Parent=Msa1452550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
