AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1403820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1403820 MtrunA17_Chr4g0077111 95.904 293 7 2 1 293 1 288 0.0 576
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1403820 AT2G43945.1 85.714 196 26 1 98 293 96 289 1.75e-122 352
Msa1403820 AT3G59870.1 79.070 215 40 2 84 293 74 288 4.92e-120 346

Find 112 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATATTACAGTGTCTTTA+TGG 0.129801 tig0022980:-39341 Msa1403820:intron
GAGAGGGATGGTTTGGGTTT+GGG 0.184276 tig0022980:+39481 None:intergenic
GAGGAGAAGGCATTGAAATT+AGG 0.197493 tig0022980:+39532 None:intergenic
GATGGTTTGGGTTTGGGTTT+GGG 0.199124 tig0022980:+39487 None:intergenic
GGATGGTTTGGGTTTGGGTT+TGG 0.214849 tig0022980:+39486 None:intergenic
AATATAACTGTAAGCAATTC+TGG 0.218417 tig0022980:+38001 None:intergenic
TGATTTGTTGCAGGAGTTAT+TGG 0.223382 tig0022980:-38319 Msa1403820:intron
CAATTTCAGGCTATGTAATA+TGG 0.235449 tig0022980:-31560 Msa1403820:intron
TGAGAGGGATGGTTTGGGTT+TGG 0.240709 tig0022980:+39480 None:intergenic
GAGGCTGTTTGCTTAAACTT+TGG 0.240953 tig0022980:+37975 None:intergenic
CTTTAACTCCAAACTTGTTT+GGG 0.246462 tig0022980:-39651 Msa1403820:CDS
AGGCTGTTTGCTTAAACTTT+GGG 0.252597 tig0022980:+37976 None:intergenic
ACTTTAACTCCAAACTTGTT+TGG 0.259552 tig0022980:-39652 Msa1403820:CDS
AGGAGAAGGCATTGAAATTA+GGG 0.276819 tig0022980:+39533 None:intergenic
CAAATAAGCCTGGACCATTC+TGG 0.279838 tig0022980:+39276 None:intergenic
TTATTATTCTTCTTTCAATA+AGG 0.280243 tig0022980:-39566 Msa1403820:CDS
TAGAGGTAGATGATCGTTAT+AGG 0.284823 tig0022980:+32402 None:intergenic
GGACCAATGCAGCTGTTATT+CGG 0.310151 tig0022980:-38045 Msa1403820:CDS
GACCAATGCAGCTGTTATTC+GGG 0.320394 tig0022980:-38044 Msa1403820:CDS
CCGTGTTGAGAGGGATGGTT+TGG 0.327532 tig0022980:+39474 None:intergenic
TTTATATATTCACACACATT+TGG 0.331883 tig0022980:-31105 Msa1403820:three_prime_UTR
AGGTAATTTAACCACATTCT+AGG 0.332108 tig0022980:-31274 Msa1403820:three_prime_UTR
CAAACTATGGTCGAAGGTTC+AGG 0.349293 tig0022980:-39206 Msa1403820:CDS
CTGTGCCTAATGTGGGGATT+GGG 0.355169 tig0022980:-31384 Msa1403820:three_prime_UTR
ATATACACATCTGGAGCATC+TGG 0.382091 tig0022980:-38067 Msa1403820:CDS
TAAGAATCTCAATTAGTTCC+TGG 0.386071 tig0022980:+38232 None:intergenic
GAGGCATTTAGTAGGAGTAT+AGG 0.386490 tig0022980:-39792 Msa1403820:five_prime_UTR
ACCATTCTGGAATTCGTAAT+CGG 0.393480 tig0022980:+39289 None:intergenic
CAACAAGGACCTAGAGCTAT+TGG 0.399054 tig0022980:-38288 Msa1403820:CDS
AGAGGTAGATGATCGTTATA+GGG 0.427240 tig0022980:+32403 None:intergenic
ACCATAGTTTGAACCTGGGT+TGG 0.428852 tig0022980:+39218 None:intergenic
TCCAACCCAGGTTCAAACTA+TGG 0.430883 tig0022980:-39219 Msa1403820:CDS
TCTTTGAAGTTTAGTTAGAA+AGG 0.440882 tig0022980:-31294 Msa1403820:three_prime_UTR
AAGGCATTGAAATTAGGGTT+TGG 0.442869 tig0022980:+39538 None:intergenic
AAGCAAAGCAGATGACTTGC+TGG 0.443673 tig0022980:+31521 None:intergenic
CAAACAGCCTCCAGAGAGTC+GGG 0.445251 tig0022980:-37963 Msa1403820:CDS
TCGAAGGTTCAGGTTCCATC+AGG 0.450277 tig0022980:-39196 Msa1403820:CDS
TCTGTGCCTAATGTGGGGAT+TGG 0.451536 tig0022980:-31385 Msa1403820:three_prime_UTR
CTTCGACCATAGTTTGAACC+TGG 0.455469 tig0022980:+39213 None:intergenic
CGTGTTGAGAGGGATGGTTT+GGG 0.459718 tig0022980:+39475 None:intergenic
GAAAGGTTGAGGCATTTAGT+AGG 0.468168 tig0022980:-39800 None:intergenic
AACCTGCTGGCTTCTAATAG+AGG 0.471307 tig0022980:+32385 None:intergenic
TCCTGATGTTGATTATCTAC+AGG 0.472012 tig0022980:-39153 Msa1403820:intron
TTAACCACATTCTAGGAGAA+TGG 0.472667 tig0022980:-31267 Msa1403820:three_prime_UTR
TGCCTAATGTGGGGATTGGG+AGG 0.479567 tig0022980:-31381 Msa1403820:three_prime_UTR
AGCAGACAAGGAGGAGGAGA+AGG 0.481680 tig0022980:+39519 None:intergenic
ACCTGTAGATAATCAACATC+AGG 0.485806 tig0022980:+39152 None:intergenic
CATTATTTCTGTGCCTAATG+TGG 0.485895 tig0022980:-31392 Msa1403820:three_prime_UTR
TACGAATTCCAGAATGGTCC+AGG 0.489866 tig0022980:-39284 Msa1403820:CDS
GCCTACTAGTTGTTCTTCAT+CGG 0.495921 tig0022980:+39250 None:intergenic
GAAGAATAATAATGTGGATG+TGG 0.498732 tig0022980:+39577 None:intergenic
GAGGGGAAAATCGAGGAAGA+AGG 0.499709 tig0022980:-39691 Msa1403820:five_prime_UTR
ATTATTTCTGTGCCTAATGT+GGG 0.500738 tig0022980:-31391 Msa1403820:three_prime_UTR
GCTTTGCTTTCCATGACAGT+AGG 0.502426 tig0022980:-31507 Msa1403820:CDS
ATACTGTTCAAAAGTGTGCT+TGG 0.503618 tig0022980:+31138 None:intergenic
AGATAATCAACATCAGGAGC+AGG 0.506296 tig0022980:+39158 None:intergenic
CCATTCTGGAATTCGTAATC+GGG 0.512432 tig0022980:+39290 None:intergenic
CCATGACAGTAGGTTGCTCA+TGG 0.514082 tig0022980:-31497 Msa1403820:CDS
ATATGAAGATGAAGCGATGA+TGG 0.520857 tig0022980:+39609 None:intergenic
TACCTCTATTAGAAGCCAGC+AGG 0.523502 tig0022980:-32387 Msa1403820:intron
TTTCTAACTAAACTTCAAAG+AGG 0.526054 tig0022980:+31296 None:intergenic
GGCTGTTTGCTTAAACTTTG+GGG 0.529115 tig0022980:+37977 None:intergenic
ACCCCGAATAACAGCTGCAT+TGG 0.530833 tig0022980:+38042 None:intergenic
GAGAGAAGCAGACAAGGAGG+AGG 0.533896 tig0022980:+39513 None:intergenic
TCATCGGAATCAAATAAGCC+TGG 0.538261 tig0022980:+39266 None:intergenic
AGATGAAGCGATGATGGTAT+TGG 0.547279 tig0022980:+39615 None:intergenic
ATTCTAGGAGAATGGTAGAA+TGG 0.550253 tig0022980:-31259 Msa1403820:three_prime_UTR
TACCGTTGTCCGTGTTGAGA+GGG 0.554542 tig0022980:+39465 None:intergenic
GTTGTCCGTGTTGAGAGGGA+TGG 0.554548 tig0022980:+39469 None:intergenic
ACCCTCCCAATCCCCACATT+AGG 0.555266 tig0022980:+31379 None:intergenic
TGAGATTCTTAGCTATGCCA+TGG 0.555470 tig0022980:-38220 Msa1403820:CDS
GGGCGAGAGAGAAGCAGACA+AGG 0.558012 tig0022980:+39507 None:intergenic
GAAGAAAGAAAGCAAAGCAG+AGG 0.558270 tig0022980:-39719 Msa1403820:five_prime_UTR
GTACCGTTGTCCGTGTTGAG+AGG 0.562477 tig0022980:+39464 None:intergenic
GCAAACAGCCTCCAGAGAGT+CGG 0.563421 tig0022980:-37964 Msa1403820:CDS
CCATGAGCAACCTACTGTCA+TGG 0.568451 tig0022980:+31497 None:intergenic
CCCGATTACGAATTCCAGAA+TGG 0.568870 tig0022980:-39290 Msa1403820:CDS
TTTAACTCCAAACTTGTTTG+GGG 0.571717 tig0022980:-39650 Msa1403820:CDS
TTCGACCATAGTTTGAACCT+GGG 0.575169 tig0022980:+39214 None:intergenic
AGCAAAGCAGAGGTGAGTGA+GGG 0.576158 tig0022980:-39709 Msa1403820:five_prime_UTR
TCCGATGAAGAACAACTAGT+AGG 0.577541 tig0022980:-39251 Msa1403820:CDS
AAGCAAAGCAGAGGTGAGTG+AGG 0.578434 tig0022980:-39710 Msa1403820:five_prime_UTR
TTGAAAGAAGAATAATAATG+TGG 0.585144 tig0022980:+39571 None:intergenic
GAGTCGGGAGCTGTTATCCA+AGG 0.589424 tig0022980:-37948 Msa1403820:intron
GTTGTAGTCGGATACCCTGA+TGG 0.590913 tig0022980:+39181 None:intergenic
TTAACTCCAAACTTGTTTGG+GGG 0.593798 tig0022980:-39649 Msa1403820:CDS
CACAGAAATAATGTGTACAC+GGG 0.595753 tig0022980:+31402 None:intergenic
TCTACCATTCTCCTAGAATG+TGG 0.602698 tig0022980:+31263 None:intergenic
ATCCCTCTCAACACGGACAA+CGG 0.603072 tig0022980:-39467 Msa1403820:intron
TTATTTCTGTGCCTAATGTG+GGG 0.604256 tig0022980:-31390 Msa1403820:three_prime_UTR
TGAAGCGATGATGGTATTGG+TGG 0.605081 tig0022980:+39618 None:intergenic
TATACACATCTGGAGCATCT+GGG 0.612826 tig0022980:-38066 Msa1403820:CDS
ATCAGGAGCAGGGTTGTAGT+CGG 0.614000 tig0022980:+39169 None:intergenic
GCCTAATGTGGGGATTGGGA+GGG 0.616534 tig0022980:-31380 Msa1403820:three_prime_UTR
GCAAAGCAGAGGTGAGTGAG+GGG 0.616762 tig0022980:-39708 Msa1403820:five_prime_UTR
CCAAACCATCCCTCTCAACA+CGG 0.623065 tig0022980:-39474 Msa1403820:CDS
GATAATCAACATCAGGAGCA+GGG 0.624264 tig0022980:+39159 None:intergenic
CGAAGGTTCAGGTTCCATCA+GGG 0.628724 tig0022980:-39195 Msa1403820:CDS
GTTTGGAGTTAAAGTAGCAG+TGG 0.628733 tig0022980:+39660 None:intergenic
AGGCACTCAAATTCCAACCC+AGG 0.632880 tig0022980:-39231 Msa1403820:CDS
CAGGTTCAAACTATGGTCGA+AGG 0.635069 tig0022980:-39212 Msa1403820:CDS
ATGCTCCAGATGTGTATATG+TGG 0.635785 tig0022980:+38071 None:intergenic
CGAGAGAGAAGCAGACAAGG+AGG 0.635916 tig0022980:+39510 None:intergenic
GCACAGAAATAATGTGTACA+CGG 0.638810 tig0022980:+31401 None:intergenic
AAACATGGGATTCATGCACC+AGG 0.638864 tig0022980:-38250 Msa1403820:CDS
AACAGCTCCCGACTCTCTGG+AGG 0.639143 tig0022980:+37956 None:intergenic
ATCTCTTACAGTTATAACCA+TGG 0.660140 tig0022980:+38203 None:intergenic
GGTGAGTGAGGGGAAAATCG+AGG 0.662615 tig0022980:-39698 Msa1403820:five_prime_UTR
ACCAATGCAGCTGTTATTCG+GGG 0.670991 tig0022980:-38043 Msa1403820:CDS
ACTCTCTTCTACCTTGACTG+AGG 0.712767 tig0022980:-31436 Msa1403820:exon
TTATTGGCTATTCAACAACA+AGG 0.719917 tig0022980:-38303 Msa1403820:CDS
ACAGAAATAATGTGTACACG+GGG 0.771545 tig0022980:+31403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTAATTTTAACTTTG+TGG - tig0022980:33051-33070 Msa1403820:intron 10.0%
!! TTTAATGTTATAAATTTGAT+AGG - tig0022980:33715-33734 Msa1403820:intron 10.0%
!! AATTAAGAGTAATTAATATA+GGG - tig0022980:34567-34586 Msa1403820:intron 10.0%
!!! TTAATATTTTCTATAATATC+CGG + tig0022980:36786-36805 None:intergenic 10.0%
!! TTATTATTCTTCTTTCAATA+AGG - tig0022980:31329-31348 Msa1403820:three_prime_UTR 15.0%
!! GTAATATAACAAACAATAAT+AGG + tig0022980:31544-31563 None:intergenic 15.0%
!!! ATCATATCTTTTTGTAATTT+GGG - tig0022980:32044-32063 Msa1403820:intron 15.0%
!! TTTAAACTAGTATTAACAAA+AGG + tig0022980:32218-32237 None:intergenic 15.0%
!!! TAGTTTAAAATAGTAGAAAA+TGG - tig0022980:32229-32248 Msa1403820:intron 15.0%
!!! AGTTTAAAATAGTAGAAAAT+GGG - tig0022980:32230-32249 Msa1403820:intron 15.0%
!! CAAATATTCATTATCTATAA+TGG - tig0022980:32493-32512 Msa1403820:intron 15.0%
!!! GTTTTTATACAATATCATTA+AGG - tig0022980:32988-33007 Msa1403820:intron 15.0%
!! TTAAATGTACATTTATAACA+AGG + tig0022980:33363-33382 None:intergenic 15.0%
!! TATATAAAAGTAATTACTCT+TGG - tig0022980:33532-33551 Msa1403820:intron 15.0%
!! AAACATGTTTATGAAATTAT+TGG - tig0022980:33650-33669 Msa1403820:intron 15.0%
!! ATAACATTAAATAATTGCAT+TGG + tig0022980:33706-33725 None:intergenic 15.0%
!!! CATTTTTGTTTCTTATAAAA+AGG + tig0022980:34347-34366 None:intergenic 15.0%
!!! AACAAAAATGTCAATATTTT+TGG - tig0022980:34357-34376 Msa1403820:intron 15.0%
!! GAATTAAGAGTAATTAATAT+AGG - tig0022980:34566-34585 Msa1403820:intron 15.0%
!! ATTAAGAGTAATTAATATAG+GGG - tig0022980:34568-34587 Msa1403820:intron 15.0%
!! TAAGGAAAATTAATAATCAA+AGG + tig0022980:34812-34831 None:intergenic 15.0%
!! AATAAGATATGAGAATTTAA+AGG - tig0022980:35366-35385 Msa1403820:intron 15.0%
!! ATAAGATATGAGAATTTAAA+GGG - tig0022980:35367-35386 Msa1403820:intron 15.0%
!! TAAGAATATCAACAAAAAAT+TGG - tig0022980:36319-36338 Msa1403820:intron 15.0%
!! ATAATACTCTTCTTAAAATT+TGG - tig0022980:36869-36888 Msa1403820:intron 15.0%
!! TAATACTCTTCTTAAAATTT+GGG - tig0022980:36870-36889 Msa1403820:intron 15.0%
!!! AAAGTTATTTAAGATTTGTT+GGG + tig0022980:37071-37090 None:intergenic 15.0%
!!! TTTTAAATCTTTTTTTAGTC+TGG - tig0022980:37562-37581 Msa1403820:intron 15.0%
!! TAAAAAAATCTATATCTACT+AGG + tig0022980:37597-37616 None:intergenic 15.0%
!! TAAATAAATAGACATGAAAT+GGG + tig0022980:37643-37662 None:intergenic 15.0%
!! ATTTATTAAATTACGAATTG+AGG + tig0022980:38927-38946 None:intergenic 15.0%
!!! TTATTTATTTGAGGTAAAAT+TGG - tig0022980:38953-38972 Msa1403820:intron 15.0%
!!! ATACAAATTTTTTCATACTT+GGG + tig0022980:39017-39036 None:intergenic 15.0%
!! ATATATAAGTAACTAACAAA+CGG + tig0022980:39145-39164 None:intergenic 15.0%
!! TTAGTTACTTATATATTGTT+TGG - tig0022980:39149-39168 Msa1403820:intron 15.0%
!! TTGAAAGAAGAATAATAATG+TGG + tig0022980:31327-31346 None:intergenic 20.0%
!! TAACAAACAATAATAGGATT+GGG + tig0022980:31538-31557 None:intergenic 20.0%
!! ATAACAAACAATAATAGGAT+TGG + tig0022980:31539-31558 None:intergenic 20.0%
!!! TACAAAAAGTATTTTTGCAT+CGG + tig0022980:31954-31973 None:intergenic 20.0%
!! AAAAAGATATGATGAATACA+AGG + tig0022980:32037-32056 None:intergenic 20.0%
!!! CATCATATCTTTTTGTAATT+TGG - tig0022980:32043-32062 Msa1403820:intron 20.0%
!! AAAAATCCGTCATAAAAATA+TGG + tig0022980:32394-32413 None:intergenic 20.0%
!!! ATATTTTTATGACGGATTTT+TGG - tig0022980:32393-32412 Msa1403820:CDS 20.0%
!!! TAATTAAATTGATTTGTTGC+AGG - tig0022980:32567-32586 Msa1403820:intron 20.0%
!!! TCTCGTAATATATTTTACAT+AGG - tig0022980:33028-33047 Msa1403820:intron 20.0%
!!! TTTAATTTTAACTTTGTGGT+AGG - tig0022980:33055-33074 Msa1403820:intron 20.0%
!! AAGAATAAAATATCACAAAC+AGG + tig0022980:33113-33132 None:intergenic 20.0%
!! TGGCTATATATATCATTATT+TGG + tig0022980:33333-33352 None:intergenic 20.0%
!!! ATTTATAACAAGGAGAATTT+TGG + tig0022980:33353-33372 None:intergenic 20.0%
!! AACTAAAAATACACTTTCTT+TGG + tig0022980:33820-33839 None:intergenic 20.0%
!! TTAAAGATAAGACAAAACTT+AGG + tig0022980:33876-33895 None:intergenic 20.0%
!!! TGTGACTTTTTCTTATATTT+GGG - tig0022980:34031-34050 Msa1403820:intron 20.0%
!!! TCCAATATTTTCCTTATATA+TGG - tig0022980:34066-34085 Msa1403820:intron 20.0%
!!! CCAATATTTTCCTTATATAT+GGG - tig0022980:34067-34086 Msa1403820:intron 20.0%
!!! GTATTTTATAATGGTGAATT+TGG - tig0022980:34100-34119 Msa1403820:intron 20.0%
!!! ATTTAGCTTCTTTTTTTTTG+TGG + tig0022980:34494-34513 None:intergenic 20.0%
!! TTCTCTCTCATAATAATTAA+GGG + tig0022980:34527-34546 None:intergenic 20.0%
!! ATTCTCTCTCATAATAATTA+AGG + tig0022980:34528-34547 None:intergenic 20.0%
!!! ATGTATTTTGCTTCTTATAT+TGG - tig0022980:34673-34692 Msa1403820:intron 20.0%
!!! TGTATTTTGCTTCTTATATT+GGG - tig0022980:34674-34693 Msa1403820:intron 20.0%
!! ATGTACAAATATATACGAAA+GGG + tig0022980:34847-34866 None:intergenic 20.0%
!! TACTTATGAAGTTAATACTT+GGG + tig0022980:35161-35180 None:intergenic 20.0%
!! TTACTTATGAAGTTAATACT+TGG + tig0022980:35162-35181 None:intergenic 20.0%
!! AGATTCTTATGAGAATTTAA+AGG - tig0022980:35335-35354 Msa1403820:intron 20.0%
!! GATTCTTATGAGAATTTAAA+GGG - tig0022980:35336-35355 Msa1403820:intron 20.0%
!! ATTCTTATGAGAATTTAAAG+GGG - tig0022980:35337-35356 Msa1403820:intron 20.0%
!! TAAGATATGAGAATTTAAAG+GGG - tig0022980:35368-35387 Msa1403820:intron 20.0%
!! TTATTGAGAAAGATTAATAG+CGG - tig0022980:35881-35900 Msa1403820:intron 20.0%
!!! TTATAAAAGGAACTCTAAAA+TGG - tig0022980:36073-36092 Msa1403820:intron 20.0%
!!! ATATTAGTTTTCATACAAAC+CGG - tig0022980:36615-36634 Msa1403820:intron 20.0%
!! TTTCTTTCAAAGTTTATTTC+CGG + tig0022980:36637-36656 None:intergenic 20.0%
!!! CAAAGTTATTTAAGATTTGT+TGG + tig0022980:37072-37091 None:intergenic 20.0%
!! TTTGATACGTCTTAAAATTT+GGG - tig0022980:37088-37107 Msa1403820:intron 20.0%
!! AAATAAATAGACATGAAATG+GGG + tig0022980:37642-37661 None:intergenic 20.0%
!! GTAAATAAATAGACATGAAA+TGG + tig0022980:37644-37663 None:intergenic 20.0%
!!! TATTTGTTTACCTTTTTATC+TGG - tig0022980:37686-37705 Msa1403820:intron 20.0%
!! AATGCATGCTATAAAAATTT+AGG - tig0022980:37736-37755 Msa1403820:intron 20.0%
!! CAATACAATATATACAAACT+AGG + tig0022980:37780-37799 None:intergenic 20.0%
!!! GTTATTTTTCTCCATATTTA+GGG + tig0022980:38336-38355 None:intergenic 20.0%
!! TTATAAATTCGACCATAATA+CGG + tig0022980:38412-38431 None:intergenic 20.0%
!! AAAGAAATTAAACTGAAAGA+AGG - tig0022980:38744-38763 Msa1403820:intron 20.0%
!! AAGAAATTAAACTGAAAGAA+GGG - tig0022980:38745-38764 Msa1403820:intron 20.0%
!!! AATGCATTGTTATTTATTTG+AGG - tig0022980:38944-38963 Msa1403820:intron 20.0%
!!! CATACAAATTTTTTCATACT+TGG + tig0022980:39018-39037 None:intergenic 20.0%
!! TTAAAACATCACATAAGAAA+TGG - tig0022980:39038-39057 Msa1403820:intron 20.0%
!! TAAAACATCACATAAGAAAT+GGG - tig0022980:39039-39058 Msa1403820:intron 20.0%
!! TTTATATATTCACACACATT+TGG - tig0022980:39790-39809 Msa1403820:five_prime_UTR 20.0%
! GTTATATTACAGTGTCTTTA+TGG - tig0022980:31554-31573 Msa1403820:CDS 25.0%
! TTTAAACCATATAAGTATGC+AGG + tig0022980:31905-31924 None:intergenic 25.0%
! TTGTAACCTAATTTATGCAT+TGG - tig0022980:31969-31988 Msa1403820:intron 25.0%
! TGTAACCTAATTTATGCATT+GGG - tig0022980:31970-31989 Msa1403820:intron 25.0%
! AAATTCCCAATGCATAAATT+AGG + tig0022980:31978-31997 None:intergenic 25.0%
! TGATAAAGAAAATGAGCAAA+AGG + tig0022980:32002-32021 None:intergenic 25.0%
!!! ACTTTTGTTTCATATTCGAT+CGG - tig0022980:32071-32090 Msa1403820:intron 25.0%
!!! GTTTTTAGTCAATACTAAGT+GGG - tig0022980:32252-32271 Msa1403820:intron 25.0%
! TAACTTACTCCTTAATGTTT+AGG - tig0022980:32285-32304 Msa1403820:intron 25.0%
!!! CATTGACCATATTTTTATGA+CGG - tig0022980:32385-32404 Msa1403820:intron 25.0%
!! TATTTGATGATTGTGTGAAA+AGG + tig0022980:32479-32498 None:intergenic 25.0%
! AATATAACTGTAAGCAATTC+TGG + tig0022980:32897-32916 None:intergenic 25.0%
! TTCAAATGTAAACTTTACCT+TGG + tig0022980:32967-32986 None:intergenic 25.0%
! TCTATATGTATTATAACGAC+TGG - tig0022980:33169-33188 Msa1403820:intron 25.0%
! CTATATGTATTATAACGACT+GGG - tig0022980:33170-33189 Msa1403820:intron 25.0%
!!! TGATAAAGTTTTATTCTACC+CGG - tig0022980:33247-33266 Msa1403820:intron 25.0%
! AATTTGATAGGTACCAAATA+TGG - tig0022980:33727-33746 Msa1403820:intron 25.0%
! AATGCACATCCTTAAATATA+GGG + tig0022980:33753-33772 None:intergenic 25.0%
! AAATGCACATCCTTAAATAT+AGG + tig0022980:33754-33773 None:intergenic 25.0%
! TCTTATCTTTAATGCTCTTA+GGG - tig0022980:33884-33903 Msa1403820:intron 25.0%
!!! GTGTGACTTTTTCTTATATT+TGG - tig0022980:34030-34049 Msa1403820:intron 25.0%
! CCCATATATAAGGAAAATAT+TGG + tig0022980:34070-34089 None:intergenic 25.0%
!! TGGAAATCATTTTCTTATCT+TGG - tig0022980:34120-34139 Msa1403820:intron 25.0%
!!! AACTTATCATTTGATGATGT+TGG - tig0022980:34231-34250 Msa1403820:intron 25.0%
!!! ACTTATCATTTGATGATGTT+GGG - tig0022980:34232-34251 Msa1403820:intron 25.0%
! TGTTTCTTATAAAAAGGACT+GGG + tig0022980:34341-34360 None:intergenic 25.0%
!! TTGTTTCTTATAAAAAGGAC+TGG + tig0022980:34342-34361 None:intergenic 25.0%
! CTTGTAATACAATTGAAAAC+TGG + tig0022980:34405-34424 None:intergenic 25.0%
! ACAATGCATAATATATGCAA+AGG - tig0022980:34446-34465 Msa1403820:intron 25.0%
! AGCAAAATACATAAATCATC+AGG + tig0022980:34665-34684 None:intergenic 25.0%
! TGTACAAATATATACGAAAG+GGG + tig0022980:34846-34865 None:intergenic 25.0%
! GATGTACAAATATATACGAA+AGG + tig0022980:34848-34867 None:intergenic 25.0%
! GGATCTTACAAATTGTATTA+CGG + tig0022980:34970-34989 None:intergenic 25.0%
! AGTAAATGAAATTACACAGA+AGG - tig0022980:35205-35224 Msa1403820:intron 25.0%
! GTAAATGAAATTACACAGAA+GGG - tig0022980:35206-35225 Msa1403820:intron 25.0%
! TAAATGAAATTACACAGAAG+GGG - tig0022980:35207-35226 Msa1403820:intron 25.0%
!! ACACATGTAAAAGATTGTTT+TGG - tig0022980:35274-35293 Msa1403820:intron 25.0%
!!! CAAGTTTTTTCCAATAACAA+TGG + tig0022980:35580-35599 None:intergenic 25.0%
!! TTGTTATTGGAAAAAACTTG+AGG - tig0022980:35580-35599 Msa1403820:intron 25.0%
! TATTGAGAAAGATTAATAGC+GGG - tig0022980:35882-35901 Msa1403820:intron 25.0%
! AAAACTATGCAATAACACTT+TGG + tig0022980:36108-36127 None:intergenic 25.0%
! AAAAAAACCTATTCAACCAT+TGG - tig0022980:36406-36425 Msa1403820:intron 25.0%
! TACGATCATGTGAAAAAAAT+TGG - tig0022980:36464-36483 Msa1403820:intron 25.0%
! ATCATGTGAAAAAAATTGGT+TGG - tig0022980:36468-36487 Msa1403820:intron 25.0%
! TCATGTGAAAAAAATTGGTT+GGG - tig0022980:36469-36488 Msa1403820:intron 25.0%
! GGTTTGTATGAAAACTAATA+TGG + tig0022980:36616-36635 None:intergenic 25.0%
!! ACTCCATTTTCATAAATCTA+GGG + tig0022980:36818-36837 None:intergenic 25.0%
! CCTAAAATTGTGTTTATAAG+TGG + tig0022980:36948-36967 None:intergenic 25.0%
!! CCACTTATAAACACAATTTT+AGG - tig0022980:36945-36964 Msa1403820:intron 25.0%
! CTTTGATACGTCTTAAAATT+TGG - tig0022980:37087-37106 Msa1403820:intron 25.0%
!! ACAAATTGGAGTATTATGTA+GGG + tig0022980:37430-37449 None:intergenic 25.0%
! CTGAGTTCTTATATCAAAAT+TGG + tig0022980:37520-37539 None:intergenic 25.0%
!!! GACTTTTTTTTTTTGACAAG+AGG + tig0022980:37666-37685 None:intergenic 25.0%
!! AAAAGAGATAAATCCAGTTT+TGG + tig0022980:37811-37830 None:intergenic 25.0%
! TAAAGAAAAGGGAACATTAA+GGG + tig0022980:38228-38247 None:intergenic 25.0%
! TTAAAGAAAAGGGAACATTA+AGG + tig0022980:38229-38248 None:intergenic 25.0%
! TAAGAACTTCAATCAGAATA+TGG + tig0022980:38309-38328 None:intergenic 25.0%
!!! GGTTATTTTTCTCCATATTT+AGG + tig0022980:38337-38356 None:intergenic 25.0%
! TATAAATTCGACCATAATAC+GGG + tig0022980:38411-38430 None:intergenic 25.0%
! AAATAAAAGACAGCAAGAAA+AGG + tig0022980:38547-38566 None:intergenic 25.0%
!!! TTTCTTGCTGTCTTTTATTT+TGG - tig0022980:38547-38566 Msa1403820:intron 25.0%
! ACTTAATTGTTTCATATCAG+TGG - tig0022980:38823-38842 Msa1403820:intron 25.0%
! AAAACATCACATAAGAAATG+GGG - tig0022980:39040-39059 Msa1403820:intron 25.0%
! ATACCAATTTAGAGAATCAA+TGG - tig0022980:39083-39102 Msa1403820:intron 25.0%
! TCGTTTAGTCTAATGTAAAT+TGG - tig0022980:39189-39208 Msa1403820:CDS 25.0%
! GTAAATTGGATAAATAAGCT+CGG - tig0022980:39203-39222 Msa1403820:CDS 25.0%
! CAAAAAACTAAAATACAAGC+TGG + tig0022980:39254-39273 None:intergenic 25.0%
! TTTCTAACTAAACTTCAAAG+AGG + tig0022980:39602-39621 None:intergenic 25.0%
!!! TCTTTGAAGTTTAGTTAGAA+AGG - tig0022980:39601-39620 Msa1403820:CDS 25.0%
!!! TAGACTTCATTTTAAAACGT+AGG - tig0022980:39662-39681 Msa1403820:CDS 25.0%
!! ACTACTGAAAACTCTATTTT+TGG - tig0022980:39704-39723 Msa1403820:five_prime_UTR 25.0%
! ACTTTAACTCCAAACTTGTT+TGG - tig0022980:31243-31262 Msa1403820:three_prime_UTR 30.0%
! CTTTAACTCCAAACTTGTTT+GGG - tig0022980:31244-31263 Msa1403820:three_prime_UTR 30.0%
! TTTAACTCCAAACTTGTTTG+GGG - tig0022980:31245-31264 Msa1403820:three_prime_UTR 30.0%
GAAGAATAATAATGTGGATG+TGG + tig0022980:31321-31340 None:intergenic 30.0%
TGTTCTTCACATATTCTGTT+TGG - tig0022980:31861-31880 Msa1403820:intron 30.0%
TTCACATATTCTGTTTGGTA+GGG - tig0022980:31866-31885 Msa1403820:intron 30.0%
TTTACACCTGCATACTTATA+TGG - tig0022980:31896-31915 Msa1403820:intron 30.0%
! TTTTGCATCGGAATATTTTG+CGG + tig0022980:31942-31961 None:intergenic 30.0%
AAGATATGATGAATACAAGG+AGG + tig0022980:32034-32053 None:intergenic 30.0%
!!! GGTTTTTAGTCAATACTAAG+TGG - tig0022980:32251-32270 Msa1403820:intron 30.0%
TTACTCCTTAATGTTTAGGT+AGG - tig0022980:32289-32308 Msa1403820:intron 30.0%
TTACTCCTACCTAAACATTA+AGG + tig0022980:32297-32316 None:intergenic 30.0%
TTTAGGTAGGAGTAAGTTAT+CGG - tig0022980:32302-32321 Msa1403820:intron 30.0%
CGTCATAAAAATATGGTCAA+TGG + tig0022980:32387-32406 None:intergenic 30.0%
! TTATTGGCTATTCAACAACA+AGG - tig0022980:32592-32611 Msa1403820:intron 30.0%
!!! TTTTTTGGAACACGAAACAT+GGG - tig0022980:32631-32650 Msa1403820:intron 30.0%
TAAGAATCTCAATTAGTTCC+TGG + tig0022980:32666-32685 None:intergenic 30.0%
ATCTCTTACAGTTATAACCA+TGG + tig0022980:32695-32714 None:intergenic 30.0%
AACAAAAATCAGAGCTTGTA+CGG + tig0022980:32746-32765 None:intergenic 30.0%
AGTTGTGAAACATAGTCATA+GGG + tig0022980:32775-32794 None:intergenic 30.0%
AAGTTGTGAAACATAGTCAT+AGG + tig0022980:32776-32795 None:intergenic 30.0%
ATGACTATGTTTCACAACTT+AGG - tig0022980:32776-32795 Msa1403820:intron 30.0%
AAAAACCACATATACACATC+TGG - tig0022980:32819-32838 Msa1403820:intron 30.0%
TATTATAACGACTGGGATAA+AGG - tig0022980:33177-33196 Msa1403820:intron 30.0%
CTTAAATATAGGGCCATATT+TGG + tig0022980:33743-33762 None:intergenic 30.0%
CAAATATGGCCCTATATTTA+AGG - tig0022980:33741-33760 Msa1403820:intron 30.0%
AAACTTAGGTACATTTCCTT+AGG + tig0022980:33862-33881 None:intergenic 30.0%
GTCTTATCTTTAATGCTCTT+AGG - tig0022980:33883-33902 Msa1403820:intron 30.0%
TTTAATGCTCTTAGGGAATA+GGG - tig0022980:33891-33910 Msa1403820:intron 30.0%
!!! TCTGAGGGAGTATTTTATAA+TGG - tig0022980:34091-34110 Msa1403820:intron 30.0%
! TCTAGTTAAATTTTGTTCCG+TGG + tig0022980:34166-34185 None:intergenic 30.0%
AACAATTAGGACTCATTTGA+TGG + tig0022980:34287-34306 None:intergenic 30.0%
CTTCATCTTGGAAAACAATT+AGG + tig0022980:34300-34319 None:intergenic 30.0%
AAGAATGACAATCTTCATCT+TGG + tig0022980:34312-34331 None:intergenic 30.0%
GTTTCTTATAAAAAGGACTG+GGG + tig0022980:34340-34359 None:intergenic 30.0%
GGTCAATGTTTCTTACAAAA+AGG + tig0022980:34384-34403 None:intergenic 30.0%
!!! TTCTTTTTTTTTGTGGTGGT+CGG + tig0022980:34487-34506 None:intergenic 30.0%
!!! TAGCTTCTTTTTTTTTGTGG+TGG + tig0022980:34491-34510 None:intergenic 30.0%
GAATACTAAAAGCAAGTTTG+TGG - tig0022980:34544-34563 Msa1403820:intron 30.0%
!!! CTATTTTTAACGTGTTTCCT+TGG - tig0022980:34638-34657 Msa1403820:intron 30.0%
AATTTGTAAGATCCTACCTA+AGG - tig0022980:34976-34995 Msa1403820:intron 30.0%
ATTTGTAAGATCCTACCTAA+GGG - tig0022980:34977-34996 Msa1403820:intron 30.0%
! ATAAGTGCAATTTTACCCTT+AGG + tig0022980:34995-35014 None:intergenic 30.0%
!! AGTTTGATGATGAGATTTAG+AGG + tig0022980:35092-35111 None:intergenic 30.0%
! GGACTGTGTTATATTTGTTA+TGG - tig0022980:35234-35253 Msa1403820:intron 30.0%
TTATGAGAATTTAAAGGGGA+AGG - tig0022980:35341-35360 Msa1403820:intron 30.0%
ATATGAGAATTTAAAGGGGA+AGG - tig0022980:35372-35391 Msa1403820:intron 30.0%
AACTCACAAACTCTCAAAAT+TGG + tig0022980:35514-35533 None:intergenic 30.0%
ATTGAGAAAGATTAATAGCG+GGG - tig0022980:35883-35902 Msa1403820:intron 30.0%
ATTCTTGTAGTAGACGTTTA+AGG - tig0022980:36021-36040 Msa1403820:intron 30.0%
AATCATCTCTGAGTTCTTAT+GGG - tig0022980:36178-36197 Msa1403820:intron 30.0%
!!! GCTATTTTGACTAGTGTAAT+TGG + tig0022980:36213-36232 None:intergenic 30.0%
!!! TTTTTGTTTTCACCACTATG+AGG + tig0022980:36350-36369 None:intergenic 30.0%
CATGTGAAAAAAATTGGTTG+GGG - tig0022980:36470-36489 Msa1403820:intron 30.0%
ATGTGAAAAAAATTGGTTGG+GGG - tig0022980:36471-36490 Msa1403820:intron 30.0%
! ACAGAAGTTGCAGAAATTTT+AGG - tig0022980:36505-36524 Msa1403820:intron 30.0%
TAGGTGTTTCTTAATTCAAG+AGG - tig0022980:36524-36543 Msa1403820:intron 30.0%
TTTCTTAATTCAAGAGGCAA+CGG - tig0022980:36530-36549 Msa1403820:intron 30.0%
TTACACATAATCAATCAACG+AGG - tig0022980:36686-36705 Msa1403820:intron 30.0%
TTACTATAGTTACAACCAAC+TGG - tig0022980:36736-36755 Msa1403820:intron 30.0%
AGAAGTTGTAAAGTAGTTTC+CGG - tig0022980:36764-36783 Msa1403820:intron 30.0%
AGACCCTAGATTTATGAAAA+TGG - tig0022980:36812-36831 Msa1403820:intron 30.0%
! CACTCCATTTTCATAAATCT+AGG + tig0022980:36819-36838 None:intergenic 30.0%
!!! TTAACTATCATTTTAGCTCC+AGG + tig0022980:36848-36867 None:intergenic 30.0%
ACTCTTCTTAAAATTTGGGT+TGG - tig0022980:36874-36893 Msa1403820:intron 30.0%
! CTCTTCTTAAAATTTGGGTT+GGG - tig0022980:36875-36894 Msa1403820:intron 30.0%
TACTCATATTTCATCCAATG+TGG - tig0022980:36971-36990 Msa1403820:intron 30.0%
ACTCATATTTCATCCAATGT+GGG - tig0022980:36972-36991 Msa1403820:intron 30.0%
ATACGTCTTAAAATTTGGGT+TGG - tig0022980:37092-37111 Msa1403820:intron 30.0%
! TACGTCTTAAAATTTGGGTT+GGG - tig0022980:37093-37112 Msa1403820:intron 30.0%
!!! TGTTTTAGCTCAAGAACAAT+GGG + tig0022980:37346-37365 None:intergenic 30.0%
!!! ATGTTTTAGCTCAAGAACAA+TGG + tig0022980:37347-37366 None:intergenic 30.0%
! GACAAATTGGAGTATTATGT+AGG + tig0022980:37431-37450 None:intergenic 30.0%
!!! AGATTTTTTTACAAACCACC+TGG - tig0022980:37606-37625 Msa1403820:intron 30.0%
! GGATTTATCTCTTTTTGCAT+TGG - tig0022980:37816-37835 Msa1403820:intron 30.0%
AGCATGTTTGTTTGTGATTA+TGG - tig0022980:38055-38074 Msa1403820:CDS 30.0%
GCATGTTTGTTTGTGATTAT+GGG - tig0022980:38056-38075 Msa1403820:CDS 30.0%
TTGCATGTAGAGTATATTCA+GGG + tig0022980:38200-38219 None:intergenic 30.0%
TTTGCATGTAGAGTATATTC+AGG + tig0022980:38201-38220 None:intergenic 30.0%
! ATGTTCCCTTTTCTTTAAGT+AGG - tig0022980:38231-38250 Msa1403820:CDS 30.0%
! TGTTCCCTTTTCTTTAAGTA+GGG - tig0022980:38232-38251 Msa1403820:CDS 30.0%
TGGATAAAGAACACTTCTTA+AGG - tig0022980:38364-38383 Msa1403820:intron 30.0%
GGATAAAGAACACTTCTTAA+GGG - tig0022980:38365-38384 Msa1403820:intron 30.0%
ATAAATTCGACCATAATACG+GGG + tig0022980:38410-38429 None:intergenic 30.0%
TGCACATTCAACAAAATCAT+TGG + tig0022980:38450-38469 None:intergenic 30.0%
! AATGATTTTGTTGAATGTGC+AGG - tig0022980:38449-38468 Msa1403820:intron 30.0%
TGGAGTGATTATAATTTCAC+AGG - tig0022980:38567-38586 Msa1403820:intron 30.0%
!! TGTGCATTTAGCTTTATTCA+TGG - tig0022980:38718-38737 Msa1403820:intron 30.0%
CATATGTAAGATCATATGTG+TGG - tig0022980:38789-38808 Msa1403820:intron 30.0%
!!! GCATTTAACACTTTTTCTCA+TGG - tig0022980:38845-38864 Msa1403820:intron 30.0%
! TTTCATACTTGGGAAGTTTT+AGG + tig0022980:39007-39026 None:intergenic 30.0%
AAACATCACATAAGAAATGG+GGG - tig0022980:39041-39060 Msa1403820:intron 30.0%
!! ATGCCATTGATTCTCTAAAT+TGG + tig0022980:39089-39108 None:intergenic 30.0%
ATAGCCTGAAATTGAAACAA+CGG + tig0022980:39329-39348 None:intergenic 30.0%
CAATTTCAGGCTATGTAATA+TGG - tig0022980:39335-39354 Msa1403820:intron 30.0%
GTCAAGAAGCAAAAAATTTG+CGG - tig0022980:39427-39446 Msa1403820:intron 30.0%
!! ATTATTTCTGTGCCTAATGT+GGG - tig0022980:39504-39523 Msa1403820:CDS 30.0%
AGGTAATTTAACCACATTCT+AGG - tig0022980:39621-39640 Msa1403820:CDS 30.0%
! AGAGTTTTCAGTAGTTATGT+AGG + tig0022980:39699-39718 None:intergenic 30.0%
! TTAACTCCAAACTTGTTTGG+GGG - tig0022980:31246-31265 Msa1403820:three_prime_UTR 35.0%
ATATGAAGATGAAGCGATGA+TGG + tig0022980:31289-31308 None:intergenic 35.0%
!! AAGGCATTGAAATTAGGGTT+TGG + tig0022980:31360-31379 None:intergenic 35.0%
!! AGGAGAAGGCATTGAAATTA+GGG + tig0022980:31365-31384 None:intergenic 35.0%
!! ACCATTCTGGAATTCGTAAT+CGG + tig0022980:31609-31628 None:intergenic 35.0%
! TCCTGATGTTGATTATCTAC+AGG - tig0022980:31742-31761 Msa1403820:intron 35.0%
ACCTGTAGATAATCAACATC+AGG + tig0022980:31746-31765 None:intergenic 35.0%
CTTCACATATTCTGTTTGGT+AGG - tig0022980:31865-31884 Msa1403820:intron 35.0%
TCACATATTCTGTTTGGTAG+GGG - tig0022980:31867-31886 Msa1403820:intron 35.0%
TGAATACAAGGAGGATACAA+GGG + tig0022980:32025-32044 None:intergenic 35.0%
ATGAATACAAGGAGGATACA+AGG + tig0022980:32026-32045 None:intergenic 35.0%
AGTCAATACTAAGTGGGTAT+AGG - tig0022980:32258-32277 Msa1403820:intron 35.0%
AACACACACACACACAATAT+AGG + tig0022980:32331-32350 None:intergenic 35.0%
!! TGTGTGTGTGTTTGTTATTG+TGG - tig0022980:32339-32358 Msa1403820:intron 35.0%
!! TGATTTGTTGCAGGAGTTAT+TGG - tig0022980:32576-32595 Msa1403820:intron 35.0%
!!! CTTTTTTGGAACACGAAACA+TGG - tig0022980:32630-32649 Msa1403820:intron 35.0%
AGGCTGTTTGCTTAAACTTT+GGG + tig0022980:32922-32941 None:intergenic 35.0%
TCACAAACAGGAAGAGAAAA+AGG + tig0022980:33101-33120 None:intergenic 35.0%
TTTCCTTAGTGCTTATCGTA+TGG - tig0022980:33771-33790 Msa1403820:intron 35.0%
!! AACCATACAAAAAGCACCTA+AGG - tig0022980:33843-33862 Msa1403820:intron 35.0%
!! TTCCTTAGGTGCTTTTTGTA+TGG + tig0022980:33848-33867 None:intergenic 35.0%
CTTTAATGCTCTTAGGGAAT+AGG - tig0022980:33890-33909 Msa1403820:intron 35.0%
TCACACATGTTAAGATGCAT+CGG + tig0022980:34016-34035 None:intergenic 35.0%
TTCCTTATATATGGGATCTG+AGG - tig0022980:34075-34094 Msa1403820:intron 35.0%
TCCTTATATATGGGATCTGA+GGG - tig0022980:34076-34095 Msa1403820:intron 35.0%
! AGTTAAATTTTGTTCCGTGG+TGG + tig0022980:34163-34182 None:intergenic 35.0%
ATAATATATGCAAAGGTCCG+AGG - tig0022980:34453-34472 Msa1403820:intron 35.0%
!!! TCTTTTTTTTTGTGGTGGTC+GGG + tig0022980:34486-34505 None:intergenic 35.0%
TACATAAATCATCAGGACCA+AGG + tig0022980:34658-34677 None:intergenic 35.0%
ATTTCTTAATTGTGCTCCGA+GGG + tig0022980:34719-34738 None:intergenic 35.0%
AAAGGGGATCTCTCAAAATA+AGG + tig0022980:34830-34849 None:intergenic 35.0%
GATCCTGATAAAGTATGATC+AGG - tig0022980:34919-34938 Msa1403820:intron 35.0%
CTGATAAAGTATGATCAGGA+GGG - tig0022980:34923-34942 Msa1403820:intron 35.0%
TGATAAAGTATGATCAGGAG+GGG - tig0022980:34924-34943 Msa1403820:intron 35.0%
GTTATGGATCATATTCAACG+TGG - tig0022980:35250-35269 Msa1403820:intron 35.0%
TGAGATTTCCATGACAAAAG+TGG - tig0022980:35299-35318 Msa1403820:intron 35.0%
AACCATAGTTTCACTGGTAA+TGG + tig0022980:35437-35456 None:intergenic 35.0%
TTACCAGTGAAACTATGGTT+TGG - tig0022980:35437-35456 Msa1403820:intron 35.0%
AAACCAAACCATAGTTTCAC+TGG + tig0022980:35443-35462 None:intergenic 35.0%
AGTTTGTGAGTTGCTGTAAT+TGG - tig0022980:35522-35541 Msa1403820:intron 35.0%
AAAAAACTTGAGGTTGCTGT+GGG - tig0022980:35590-35609 Msa1403820:intron 35.0%
CATTATAACTCTGCAATAGC+AGG + tig0022980:35746-35765 None:intergenic 35.0%
AGAATGGCCATAATTCGATA+AGG - tig0022980:35784-35803 Msa1403820:intron 35.0%
CCATAATTCGATAAGGAGTT+GGG - tig0022980:35791-35810 Msa1403820:intron 35.0%
! ATCTTTCGATGCAAGTTTTG+TGG - tig0022980:35926-35945 Msa1403820:intron 35.0%
!! TCTTTCGATGCAAGTTTTGT+GGG - tig0022980:35927-35946 Msa1403820:intron 35.0%
GTCAATTCATCCACATTGAT+AGG - tig0022980:35963-35982 Msa1403820:intron 35.0%
GATGATATCAAAACCAACGA+CGG - tig0022980:36043-36062 Msa1403820:intron 35.0%
CTATGCAATAACACTTTGGA+AGG + tig0022980:36104-36123 None:intergenic 35.0%
GAATCATCTCTGAGTTCTTA+TGG - tig0022980:36177-36196 Msa1403820:intron 35.0%
ATCATCTCTGAGTTCTTATG+GGG - tig0022980:36179-36198 Msa1403820:intron 35.0%
!! AGAAACTGGTCTTGTAAGAT+AGG - tig0022980:36261-36280 Msa1403820:intron 35.0%
GGAAACTACTTTACAACTTC+TGG + tig0022980:36765-36784 None:intergenic 35.0%
CTTACAAGCTGATATTGCAA+TGG + tig0022980:36911-36930 None:intergenic 35.0%
TTGCAATATCAGCTTGTAAG+CGG - tig0022980:36911-36930 Msa1403820:intron 35.0%
TAATTCAACTCACACAGAAC+TGG - tig0022980:37118-37137 Msa1403820:intron 35.0%
ATACCATACTTCATCCAATG+TGG - tig0022980:37183-37202 Msa1403820:intron 35.0%
TACCATACTTCATCCAATGT+GGG - tig0022980:37184-37203 Msa1403820:intron 35.0%
GACGAGTAAAACTGACAAAT+TGG + tig0022980:37444-37463 None:intergenic 35.0%
!! AAATGGGGTTTTTGATTACC+AGG + tig0022980:37627-37646 None:intergenic 35.0%
GTACAACAGTCCAGATAAAA+AGG + tig0022980:37699-37718 None:intergenic 35.0%
TATTGTTCTCGATCCAAAAC+TGG - tig0022980:37795-37814 Msa1403820:intron 35.0%
! CAAAACCACAAAAGAGCATA+GGG + tig0022980:37898-37917 None:intergenic 35.0%
AATCACAAACAAACATGCTC+TGG + tig0022980:38054-38073 None:intergenic 35.0%
TAGAGTATATTCAGGGAGAA+AGG + tig0022980:38193-38212 None:intergenic 35.0%
CGTACCCTACTTAAAGAAAA+GGG + tig0022980:38239-38258 None:intergenic 35.0%
! CCTTTTCTTTAAGTAGGGTA+CGG - tig0022980:38237-38256 Msa1403820:CDS 35.0%
CAATCTAGTCCAAGGTTATT+TGG + tig0022980:38267-38286 None:intergenic 35.0%
TTACACTACAATCTAGTCCA+AGG + tig0022980:38275-38294 None:intergenic 35.0%
GTTCTTAAGCTCCCTAAATA+TGG - tig0022980:38322-38341 Msa1403820:intron 35.0%
GAGAAAAATAACCTTGCACA+TGG - tig0022980:38344-38363 Msa1403820:intron 35.0%
AGAGGTAGATGATCGTTATA+GGG + tig0022980:38495-38514 None:intergenic 35.0%
TAGAGGTAGATGATCGTTAT+AGG + tig0022980:38496-38515 None:intergenic 35.0%
TATTCAGAAAAGGTTACAGC+AGG + tig0022980:38646-38665 None:intergenic 35.0%
! ACTCATGGACTATTCAGAAA+AGG + tig0022980:38656-38675 None:intergenic 35.0%
AAAGAAGGGATCTTCTAATC+AGG - tig0022980:38759-38778 Msa1403820:intron 35.0%
AACATCACATAAGAAATGGG+GGG - tig0022980:39042-39061 Msa1403820:intron 35.0%
TGGATAAATAAGCTCGGTAT+TGG - tig0022980:39209-39228 Msa1403820:CDS 35.0%
! TCTACCGTTGTTTCAATTTC+AGG - tig0022980:39322-39341 Msa1403820:CDS 35.0%
GATAAAAATTGCCTCAGTCA+AGG + tig0022980:39473-39492 None:intergenic 35.0%
ACAGAAATAATGTGTACACG+GGG + tig0022980:39495-39514 None:intergenic 35.0%
CACAGAAATAATGTGTACAC+GGG + tig0022980:39496-39515 None:intergenic 35.0%
GCACAGAAATAATGTGTACA+CGG + tig0022980:39497-39516 None:intergenic 35.0%
!! CATTATTTCTGTGCCTAATG+TGG - tig0022980:39503-39522 Msa1403820:CDS 35.0%
!! TTATTTCTGTGCCTAATGTG+GGG - tig0022980:39505-39524 Msa1403820:CDS 35.0%
!!! GGAGGGTAATGCTTATTTTT+TGG - tig0022980:39532-39551 Msa1403820:CDS 35.0%
! TTAACCACATTCTAGGAGAA+TGG - tig0022980:39628-39647 Msa1403820:CDS 35.0%
! ATTCTAGGAGAATGGTAGAA+TGG - tig0022980:39636-39655 Msa1403820:CDS 35.0%
! ATACTGTTCAAAAGTGTGCT+TGG + tig0022980:39760-39779 None:intergenic 35.0%
! GAGGCATTTAGTAGGAGTAT+AGG - tig0022980:31103-31122 Msa1403820:three_prime_UTR 40.0%
GAAGAAAGAAAGCAAAGCAG+AGG - tig0022980:31176-31195 Msa1403820:three_prime_UTR 40.0%
! GTTTGGAGTTAAAGTAGCAG+TGG + tig0022980:31238-31257 None:intergenic 40.0%
TAGTAACCCCCAAACAAGTT+TGG + tig0022980:31255-31274 None:intergenic 40.0%
! AGATGAAGCGATGATGGTAT+TGG + tig0022980:31283-31302 None:intergenic 40.0%
!! GAGGAGAAGGCATTGAAATT+AGG + tig0022980:31366-31385 None:intergenic 40.0%
! TAATAGGATTGGGAAGTGTG+TGG + tig0022980:31528-31547 None:intergenic 40.0%
!! CCATTCTGGAATTCGTAATC+GGG + tig0022980:31608-31627 None:intergenic 40.0%
TCATCGGAATCAAATAAGCC+TGG + tig0022980:31632-31651 None:intergenic 40.0%
TCCGATGAAGAACAACTAGT+AGG - tig0022980:31644-31663 Msa1403820:intron 40.0%
GCCTACTAGTTGTTCTTCAT+CGG + tig0022980:31648-31667 None:intergenic 40.0%
TTCGACCATAGTTTGAACCT+GGG + tig0022980:31684-31703 None:intergenic 40.0%
GATAATCAACATCAGGAGCA+GGG + tig0022980:31739-31758 None:intergenic 40.0%
AGATAATCAACATCAGGAGC+AGG + tig0022980:31740-31759 None:intergenic 40.0%
ATATCACAAGTGAACGCTGA+TGG + tig0022980:31808-31827 None:intergenic 40.0%
! TAGATCACGTCCTTGATAGT+GGG - tig0022980:32169-32188 Msa1403820:intron 40.0%
TAAACATAGCCCCACTATCA+AGG + tig0022980:32182-32201 None:intergenic 40.0%
ACACACACACACAATATAGG+AGG + tig0022980:32328-32347 None:intergenic 40.0%
AAATATGGTCAATGGCGATG+TGG + tig0022980:32379-32398 None:intergenic 40.0%
TAATGTCCAGCAGATAACTG+AGG + tig0022980:32537-32556 None:intergenic 40.0%
CCAAAAAAGCCAATAGCTCT+AGG + tig0022980:32619-32638 None:intergenic 40.0%
!!! CCTAGAGCTATTGGCTTTTT+TGG - tig0022980:32616-32635 Msa1403820:intron 40.0%
TGAGATTCTTAGCTATGCCA+TGG - tig0022980:32675-32694 Msa1403820:intron 40.0%
ATGCTCCAGATGTGTATATG+TGG + tig0022980:32827-32846 None:intergenic 40.0%
! ATATACACATCTGGAGCATC+TGG - tig0022980:32828-32847 Msa1403820:intron 40.0%
! TATACACATCTGGAGCATCT+GGG - tig0022980:32829-32848 Msa1403820:intron 40.0%
GGCTGTTTGCTTAAACTTTG+GGG + tig0022980:32921-32940 None:intergenic 40.0%
GAGGCTGTTTGCTTAAACTT+TGG + tig0022980:32923-32942 None:intergenic 40.0%
ACTGCATGTGCATTAAACAC+CGG + tig0022980:33269-33288 None:intergenic 40.0%
GAACCATACGATAAGCACTA+AGG + tig0022980:33777-33796 None:intergenic 40.0%
TCCCTCAGATCCCATATATA+AGG + tig0022980:34080-34099 None:intergenic 40.0%
! TAAATTTTGTTCCGTGGTGG+AGG + tig0022980:34160-34179 None:intergenic 40.0%
TTACAAGCTCTTAGCTCAGT+TGG - tig0022980:34418-34437 Msa1403820:intron 40.0%
!!! CTTTTTTTTTGTGGTGGTCG+GGG + tig0022980:34485-34504 None:intergenic 40.0%
TTTCTTAATTGTGCTCCGAG+GGG + tig0022980:34718-34737 None:intergenic 40.0%
GATTTCTTAATTGTGCTCCG+AGG + tig0022980:34720-34739 None:intergenic 40.0%
CCTCCTGATCATACTTTATC+AGG + tig0022980:34925-34944 None:intergenic 40.0%
CCTGATAAAGTATGATCAGG+AGG - tig0022980:34922-34941 Msa1403820:intron 40.0%
GATAAAGTATGATCAGGAGG+GGG - tig0022980:34925-34944 Msa1403820:intron 40.0%
! GTGCAATTTTACCCTTAGGT+AGG + tig0022980:34991-35010 None:intergenic 40.0%
GTTGTGAACTTAGGGAATGA+CGG + tig0022980:35137-35156 None:intergenic 40.0%
! ACTTGGGTGTTGTGAACTTA+GGG + tig0022980:35145-35164 None:intergenic 40.0%
! TACTTGGGTGTTGTGAACTT+AGG + tig0022980:35146-35165 None:intergenic 40.0%
AAATTACACAGAAGGGGCAA+AGG - tig0022980:35213-35232 Msa1403820:intron 40.0%
!! CTTCTGATCCACTTTTGTCA+TGG + tig0022980:35310-35329 None:intergenic 40.0%
CATGACAAAAGTGGATCAGA+AGG - tig0022980:35308-35327 Msa1403820:intron 40.0%
GACCATTACCAGTGAAACTA+TGG - tig0022980:35432-35451 Msa1403820:intron 40.0%
TATTCTGTGAAGCTCGAGTT+AGG - tig0022980:35485-35504 Msa1403820:intron 40.0%
ATTCTGTGAAGCTCGAGTTA+GGG - tig0022980:35486-35505 Msa1403820:intron 40.0%
TTGCACGAGACCATTGTTAT+TGG - tig0022980:35567-35586 Msa1403820:intron 40.0%
GAAAAAACTTGAGGTTGCTG+TGG - tig0022980:35589-35608 Msa1403820:intron 40.0%
AATTATGGCCATTCTAGTCG+TGG + tig0022980:35779-35798 None:intergenic 40.0%
GCCATAATTCGATAAGGAGT+TGG - tig0022980:35790-35809 Msa1403820:intron 40.0%
CCCAACTCCTTATCGAATTA+TGG + tig0022980:35794-35813 None:intergenic 40.0%
CGAGAATATGGAATCAACTC+TGG - tig0022980:35823-35842 Msa1403820:intron 40.0%
!! AAGTTTTGTGGGCCAACATT+AGG - tig0022980:35938-35957 Msa1403820:intron 40.0%
!! AGTTTTGTGGGCCAACATTA+GGG - tig0022980:35939-35958 Msa1403820:intron 40.0%
ATGAATTGACGCCCTAATGT+TGG + tig0022980:35953-35972 None:intergenic 40.0%
CAAGTTTGAGCCTATCAATG+TGG + tig0022980:35976-35995 None:intergenic 40.0%
!! GATAGGCTCAAACTTGCTAT+TGG - tig0022980:35980-35999 Msa1403820:intron 40.0%
TTATAAGTCAAAGCCGTCGT+TGG + tig0022980:36059-36078 None:intergenic 40.0%
! CGACGGCTTTGACTTATAAA+AGG - tig0022980:36060-36079 Msa1403820:intron 40.0%
TCATCTCTGAGTTCTTATGG+GGG - tig0022980:36180-36199 Msa1403820:intron 40.0%
TAAAGTGACAGCTGTAACCA+AGG - tig0022980:36237-36256 Msa1403820:intron 40.0%
AAATTGGAGTCACCTCATAG+TGG - tig0022980:36335-36354 Msa1403820:intron 40.0%
GTGATCATAACTTCCTTCCA+TGG + tig0022980:36433-36452 None:intergenic 40.0%
! TACAACTTCTGGTTACCAGT+TGG + tig0022980:36754-36773 None:intergenic 40.0%
AATATCAGCTTGTAAGCGGA+GGG - tig0022980:36915-36934 Msa1403820:intron 40.0%
!!! TCACACAGAACTGGCTTTTA+AGG - tig0022980:37127-37146 Msa1403820:intron 40.0%
ACCATACTTCATCCAATGTG+GGG - tig0022980:37185-37204 Msa1403820:intron 40.0%
ACTCTATTACACCCTTTGCA+AGG - tig0022980:37217-37236 Msa1403820:intron 40.0%
AAACTCGTTGACCTTGCAAA+GGG + tig0022980:37231-37250 None:intergenic 40.0%
TTTGCAAGGTCAACGAGTTT+GGG - tig0022980:37231-37250 Msa1403820:intron 40.0%
TCTTCCCTACCAGATTTCTT+GGG + tig0022980:37305-37324 None:intergenic 40.0%
AGCATGCATTAGAGTTCATC+TGG + tig0022980:37726-37745 None:intergenic 40.0%
! GGTATGCTGCGATTTTTCTT+CGG - tig0022980:37837-37856 Msa1403820:intron 40.0%
TCTTCAGGTCCTTTAGACAT+TGG - tig0022980:37867-37886 Msa1403820:intron 40.0%
AGGGCATAACCAATGTCTAA+AGG + tig0022980:37879-37898 None:intergenic 40.0%
! TTATGCCCTATGCTCTTTTG+TGG - tig0022980:37890-37909 Msa1403820:intron 40.0%
! CCAAAACCACAAAAGAGCAT+AGG + tig0022980:37899-37918 None:intergenic 40.0%
! CCTATGCTCTTTTGTGGTTT+TGG - tig0022980:37896-37915 Msa1403820:intron 40.0%
!!! CTTCATCTTTTGCTGTTCTC+TGG - tig0022980:37955-37974 Msa1403820:CDS 40.0%
CAGAACATGTGTTTCTCTGT+AGG + tig0022980:38097-38116 None:intergenic 40.0%
CCGTACCCTACTTAAAGAAA+AGG + tig0022980:38240-38259 None:intergenic 40.0%
TACGGTCTTCCAAATAACCT+TGG - tig0022980:38255-38274 Msa1403820:CDS 40.0%
GTGTTCTTTATCCATGTGCA+AGG + tig0022980:38358-38377 None:intergenic 40.0%
TCTCTCACTGTAGAGTATGT+AGG - tig0022980:38675-38694 Msa1403820:intron 40.0%
CTCTCACTGTAGAGTATGTA+GGG - tig0022980:38676-38695 Msa1403820:intron 40.0%
TCTCACTGTAGAGTATGTAG+GGG - tig0022980:38677-38696 Msa1403820:intron 40.0%
AAATGGGGGGCAGTATAATA+TGG - tig0022980:39055-39074 Msa1403820:intron 40.0%
AATGGGGGGCAGTATAATAT+GGG - tig0022980:39056-39075 Msa1403820:intron 40.0%
TCTACCATTCTCCTAGAATG+TGG + tig0022980:39635-39654 None:intergenic 40.0%
! TGAAGCGATGATGGTATTGG+TGG + tig0022980:31280-31299 None:intergenic 45.0%
! GATGGTTTGGGTTTGGGTTT+GGG + tig0022980:31411-31430 None:intergenic 45.0%
CCCGATTACGAATTCCAGAA+TGG - tig0022980:31605-31624 Msa1403820:intron 45.0%
TACGAATTCCAGAATGGTCC+AGG - tig0022980:31611-31630 Msa1403820:intron 45.0%
CAAATAAGCCTGGACCATTC+TGG + tig0022980:31622-31641 None:intergenic 45.0%
TCCAACCCAGGTTCAAACTA+TGG - tig0022980:31676-31695 Msa1403820:intron 45.0%
ACCATAGTTTGAACCTGGGT+TGG + tig0022980:31680-31699 None:intergenic 45.0%
CTTCGACCATAGTTTGAACC+TGG + tig0022980:31685-31704 None:intergenic 45.0%
CAGGTTCAAACTATGGTCGA+AGG - tig0022980:31683-31702 Msa1403820:intron 45.0%
CAAACTATGGTCGAAGGTTC+AGG - tig0022980:31689-31708 Msa1403820:intron 45.0%
!! GGACGTGATCTACTGATTCT+CGG + tig0022980:32161-32180 None:intergenic 45.0%
GTAGATCACGTCCTTGATAG+TGG - tig0022980:32168-32187 Msa1403820:intron 45.0%
!! AGATCACGTCCTTGATAGTG+GGG - tig0022980:32170-32189 Msa1403820:intron 45.0%
CAAGTGCAGTGTTATGTCGA+TGG + tig0022980:32439-32458 None:intergenic 45.0%
AAGCAACCTCAGTTATCTGC+TGG - tig0022980:32528-32547 Msa1403820:intron 45.0%
CAACAAGGACCTAGAGCTAT+TGG - tig0022980:32607-32626 Msa1403820:intron 45.0%
AAACATGGGATTCATGCACC+AGG - tig0022980:32645-32664 Msa1403820:intron 45.0%
GGACCAATGCAGCTGTTATT+CGG - tig0022980:32850-32869 Msa1403820:intron 45.0%
GACCAATGCAGCTGTTATTC+GGG - tig0022980:32851-32870 Msa1403820:intron 45.0%
ACCAATGCAGCTGTTATTCG+GGG - tig0022980:32852-32871 Msa1403820:intron 45.0%
CTGCATGTGCATTAAACACC+GGG + tig0022980:33268-33287 None:intergenic 45.0%
! AGCTCTTAGCTCAGTTGGTA+AGG - tig0022980:34423-34442 Msa1403820:intron 45.0%
AGTTGCTGTAATTGGCAACC+AGG - tig0022980:35530-35549 Msa1403820:intron 45.0%
GTTGCTGTAATTGGCAACCA+GGG - tig0022980:35531-35550 Msa1403820:intron 45.0%
TAACAATGGTCTCGTGCAAC+AGG + tig0022980:35566-35585 None:intergenic 45.0%
GTCCATAGGACTATAGTGAC+AGG - tig0022980:35633-35652 Msa1403820:intron 45.0%
CACCTGTCACTATAGTCCTA+TGG + tig0022980:35638-35657 None:intergenic 45.0%
CATAGGACTATAGTGACAGG+TGG - tig0022980:35636-35655 Msa1403820:intron 45.0%
GATAGCTAACTCCAGCTATG+TGG - tig0022980:35704-35723 Msa1403820:intron 45.0%
! TTCAAGTTCAGCCACATAGC+TGG + tig0022980:35718-35737 None:intergenic 45.0%
!! GGGCTGATTTGACGAGAATA+TGG - tig0022980:35811-35830 Msa1403820:intron 45.0%
TGAGCAATACTTGCTTGTGG+TGG - tig0022980:35847-35866 Msa1403820:intron 45.0%
TACAAGACCAGTTTCTGCCT+TGG + tig0022980:36257-36276 None:intergenic 45.0%
CCATGGACCAATGGTTGAAT+AGG + tig0022980:36416-36435 None:intergenic 45.0%
CCTATTCAACCATTGGTCCA+TGG - tig0022980:36413-36432 Msa1403820:intron 45.0%
TTCAACCATTGGTCCATGGA+AGG - tig0022980:36417-36436 Msa1403820:intron 45.0%
AACTTCCTTCCATGGACCAA+TGG + tig0022980:36425-36444 None:intergenic 45.0%
TTCACATGTTCTACCTTCGC+TGG + tig0022980:36567-36586 None:intergenic 45.0%
GGTAGAACATGTGAAGCCAT+CGG - tig0022980:36572-36591 Msa1403820:intron 45.0%
GAAAATGGAGTGACGAAACC+TGG - tig0022980:36827-36846 Msa1403820:intron 45.0%
CAATATCAGCTTGTAAGCGG+AGG - tig0022980:36914-36933 Msa1403820:intron 45.0%
TGTCTAGTCCTAGGCATGAA+GGG + tig0022980:37012-37031 None:intergenic 45.0%
ATGTCTAGTCCTAGGCATGA+AGG + tig0022980:37013-37032 None:intergenic 45.0%
TCCCCACATTGGATGAAGTA+TGG + tig0022980:37189-37208 None:intergenic 45.0%
ACTTCATCCAATGTGGGGAT+CGG - tig0022980:37190-37209 Msa1403820:intron 45.0%
CAAACTCGTTGACCTTGCAA+AGG + tig0022980:37232-37251 None:intergenic 45.0%
CTTTGCAAGGTCAACGAGTT+TGG - tig0022980:37230-37249 Msa1403820:intron 45.0%
ACAGCCCAAGAAATCTGGTA+GGG - tig0022980:37298-37317 Msa1403820:intron 45.0%
CTCTTCCCTACCAGATTTCT+TGG + tig0022980:37306-37325 None:intergenic 45.0%
CAAGAAATCTGGTAGGGAAG+AGG - tig0022980:37304-37323 Msa1403820:intron 45.0%
!! TGGGGTTTTTGATTACCAGG+TGG + tig0022980:37624-37643 None:intergenic 45.0%
TTCTTCGGCATGAACTCTTC+AGG - tig0022980:37852-37871 Msa1403820:intron 45.0%
GCACTCGTGAATAGTAGCTA+TGG - tig0022980:37918-37937 Msa1403820:intron 45.0%
CATATGCCTATTTCCAGCCA+CGG + tig0022980:37993-38012 None:intergenic 45.0%
CTGGAAATAGGCATATGGCT+GGG - tig0022980:37996-38015 Msa1403820:CDS 45.0%
!! TCTTTTGTTGCCTTGCTGTG+AGG - tig0022980:38140-38159 Msa1403820:intron 45.0%
AACAAGACATCCTCACAGCA+AGG + tig0022980:38153-38172 None:intergenic 45.0%
GCACAAGATTCCCCGTATTA+TGG - tig0022980:38397-38416 Msa1403820:intron 45.0%
TACCTCTATTAGAAGCCAGC+AGG - tig0022980:38508-38527 Msa1403820:intron 45.0%
!! AACCTGCTGGCTTCTAATAG+AGG + tig0022980:38513-38532 None:intergenic 45.0%
GGCTAGTAGTATAAACCTGC+TGG + tig0022980:38526-38545 None:intergenic 45.0%
ACTCTACAGTGAGAGACTCA+TGG + tig0022980:38671-38690 None:intergenic 45.0%
! AAGCAAAGCAGATGACTTGC+TGG + tig0022980:39377-39396 None:intergenic 45.0%
GCTTTGCTTTCCATGACAGT+AGG - tig0022980:39388-39407 Msa1403820:intron 45.0%
ACTCTCTTCTACCTTGACTG+AGG - tig0022980:39459-39478 Msa1403820:intron 45.0%
!!! TATTTTGAATTTTAATTTAA+TGG - tig0022980:31488-31507 Msa1403820:CDS 5.0%
!!! ATTTTTTTAAAGATAAAATA+AGG - tig0022980:33969-33988 Msa1403820:intron 5.0%
!!! TTTTTTTAAAGATAAAATAA+GGG - tig0022980:33970-33989 Msa1403820:intron 5.0%
!! TGAAATAAATTTAAATTTAT+AGG - tig0022980:34597-34616 Msa1403820:intron 5.0%
AAGCAAAGCAGAGGTGAGTG+AGG - tig0022980:31185-31204 Msa1403820:three_prime_UTR 50.0%
AGCAAAGCAGAGGTGAGTGA+GGG - tig0022980:31186-31205 Msa1403820:three_prime_UTR 50.0%
GAGGGGAAAATCGAGGAAGA+AGG - tig0022980:31204-31223 Msa1403820:three_prime_UTR 50.0%
! GGATGGTTTGGGTTTGGGTT+TGG + tig0022980:31412-31431 None:intergenic 50.0%
! GAGAGGGATGGTTTGGGTTT+GGG + tig0022980:31417-31436 None:intergenic 50.0%
! TGAGAGGGATGGTTTGGGTT+TGG + tig0022980:31418-31437 None:intergenic 50.0%
CGTGTTGAGAGGGATGGTTT+GGG + tig0022980:31423-31442 None:intergenic 50.0%
CCAAACCATCCCTCTCAACA+CGG - tig0022980:31421-31440 Msa1403820:exon 50.0%
ATCCCTCTCAACACGGACAA+CGG - tig0022980:31428-31447 Msa1403820:exon 50.0%
TACCGTTGTCCGTGTTGAGA+GGG + tig0022980:31433-31452 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + tig0022980:31456-31475 None:intergenic 50.0%
TGAGAGAGAGAGAGAGAGAG+AGG + tig0022980:31457-31476 None:intergenic 50.0%
AGGCACTCAAATTCCAACCC+AGG - tig0022980:31664-31683 Msa1403820:intron 50.0%
! TCGAAGGTTCAGGTTCCATC+AGG - tig0022980:31699-31718 Msa1403820:intron 50.0%
! CGAAGGTTCAGGTTCCATCA+GGG - tig0022980:31700-31719 Msa1403820:intron 50.0%
GTTGTAGTCGGATACCCTGA+TGG + tig0022980:31717-31736 None:intergenic 50.0%
ATCAGGAGCAGGGTTGTAGT+CGG + tig0022980:31729-31748 None:intergenic 50.0%
TCACAAGTGAACGCTGATGG+AGG + tig0022980:31805-31824 None:intergenic 50.0%
CAGTGTTATGTCGATGGCTG+CGG + tig0022980:32433-32452 None:intergenic 50.0%
ACCCCGAATAACAGCTGCAT+TGG + tig0022980:32856-32875 None:intergenic 50.0%
TTCTAGTCTAGCCTCCACCA+CGG - tig0022980:34146-34165 Msa1403820:intron 50.0%
GCAACAGGAACATCAAACCC+TGG + tig0022980:35551-35570 None:intergenic 50.0%
GTTGCTGTGGGCAAAATTGC+TGG - tig0022980:35602-35621 Msa1403820:intron 50.0%
TCAACCCTCCCATACCTCAA+GGG + tig0022980:35666-35685 None:intergenic 50.0%
TTCAACCCTCCCATACCTCA+AGG + tig0022980:35667-35686 None:intergenic 50.0%
GGCTGAGCAATACTTGCTTG+TGG - tig0022980:35844-35863 Msa1403820:intron 50.0%
!! TACTTGCTTGTGGTGGACGA+TGG - tig0022980:35854-35873 Msa1403820:intron 50.0%
GCTGTAACCAAGGCAGAAAC+TGG - tig0022980:36247-36266 Msa1403820:intron 50.0%
ACATGTTCTACCTTCGCTGG+AGG + tig0022980:36564-36583 None:intergenic 50.0%
GTGTGTTGAGACTCCCACAT+TGG + tig0022980:36988-37007 None:intergenic 50.0%
AACACACACCCTTCATGCCT+AGG - tig0022980:37001-37020 Msa1403820:intron 50.0%
CATGCCTAGGACTAGACATC+TGG - tig0022980:37014-37033 Msa1403820:intron 50.0%
CACTCCAGATGTCTAGTCCT+AGG + tig0022980:37021-37040 None:intergenic 50.0%
TGACATGAGTAGCCCAGTAG+TGG - tig0022980:37041-37060 Msa1403820:intron 50.0%
GACATGAGTAGCCCAGTAGT+GGG - tig0022980:37042-37061 Msa1403820:intron 50.0%
!!! CTGGCTTTTAAGGCGAGAGA+TGG - tig0022980:37137-37156 Msa1403820:intron 50.0%
AGTTGTTCCGATCCCCACAT+TGG + tig0022980:37200-37219 None:intergenic 50.0%
ACGCACAGACACACTAAGCT+TGG - tig0022980:37272-37291 Msa1403820:intron 50.0%
CACAGCCCAAGAAATCTGGT+AGG - tig0022980:37297-37316 Msa1403820:intron 50.0%
AATCTGGTAGGGAAGAGGTG+TGG - tig0022980:37309-37328 Msa1403820:intron 50.0%
CGTGGCTGGAAATAGGCATA+TGG - tig0022980:37991-38010 Msa1403820:CDS 50.0%
GCTGGAAATAGGCATATGGC+TGG - tig0022980:37995-38014 Msa1403820:CDS 50.0%
! TTGCACGAGAGTCTAAGACG+GGG + tig0022980:38608-38627 None:intergenic 50.0%
! CTTGCACGAGAGTCTAAGAC+GGG + tig0022980:38609-38628 None:intergenic 50.0%
CCTTGCACGAGAGTCTAAGA+CGG + tig0022980:38610-38629 None:intergenic 50.0%
CGTCTTAGACTCTCGTGCAA+GGG - tig0022980:38608-38627 Msa1403820:intron 50.0%
CCATGAGCAACCTACTGTCA+TGG + tig0022980:39401-39420 None:intergenic 50.0%
CCATGACAGTAGGTTGCTCA+TGG - tig0022980:39398-39417 Msa1403820:intron 50.0%
TCTGTGCCTAATGTGGGGAT+TGG - tig0022980:39510-39529 Msa1403820:CDS 50.0%
CTGTGCCTAATGTGGGGATT+GGG - tig0022980:39511-39530 Msa1403820:CDS 50.0%
GCAAAGCAGAGGTGAGTGAG+GGG - tig0022980:31187-31206 Msa1403820:three_prime_UTR 55.0%
GGTGAGTGAGGGGAAAATCG+AGG - tig0022980:31197-31216 Msa1403820:three_prime_UTR 55.0%
AGCAGACAAGGAGGAGGAGA+AGG + tig0022980:31379-31398 None:intergenic 55.0%
GAGAGAAGCAGACAAGGAGG+AGG + tig0022980:31385-31404 None:intergenic 55.0%
CGAGAGAGAAGCAGACAAGG+AGG + tig0022980:31388-31407 None:intergenic 55.0%
CCGTGTTGAGAGGGATGGTT+TGG + tig0022980:31424-31443 None:intergenic 55.0%
GTTGTCCGTGTTGAGAGGGA+TGG + tig0022980:31429-31448 None:intergenic 55.0%
GTACCGTTGTCCGTGTTGAG+AGG + tig0022980:31434-31453 None:intergenic 55.0%
GTGAACGCTGATGGAGGAGT+TGG + tig0022980:31799-31818 None:intergenic 55.0%
TGGTCAATGGCGATGTGGCA+GGG + tig0022980:32374-32393 None:intergenic 55.0%
ATGGTCAATGGCGATGTGGC+AGG + tig0022980:32375-32394 None:intergenic 55.0%
TCGATGGCTGCGGTTCATAG+GGG + tig0022980:32423-32442 None:intergenic 55.0%
GTCGATGGCTGCGGTTCATA+GGG + tig0022980:32424-32443 None:intergenic 55.0%
TGTCGATGGCTGCGGTTCAT+AGG + tig0022980:32425-32444 None:intergenic 55.0%
GCAAACAGCCTCCAGAGAGT+CGG - tig0022980:32931-32950 Msa1403820:intron 55.0%
CAAACAGCCTCCAGAGAGTC+GGG - tig0022980:32932-32951 Msa1403820:intron 55.0%
GATAACAGCTCCCGACTCTC+TGG + tig0022980:32945-32964 None:intergenic 55.0%
GAGTCGGGAGCTGTTATCCA+AGG - tig0022980:32947-32966 Msa1403820:intron 55.0%
TTTAACGTGTCCTCGCCCCT+CGG - tig0022980:34700-34719 Msa1403820:intron 55.0%
GCTGTGGGCAAAATTGCTGG+AGG - tig0022980:35605-35624 Msa1403820:intron 55.0%
GTGGGCAAAATTGCTGGAGG+AGG - tig0022980:35608-35627 Msa1403820:intron 55.0%
TGCTGGAGGAGGTTGTCCAT+AGG - tig0022980:35619-35638 Msa1403820:intron 55.0%
GTGGCTCTCCCTTGAGGTAT+GGG - tig0022980:35655-35674 Msa1403820:intron 55.0%
CTCTCCCTTGAGGTATGGGA+GGG - tig0022980:35659-35678 Msa1403820:intron 55.0%
CATTCTAGTCGTGGCTGTGC+AGG + tig0022980:35770-35789 None:intergenic 55.0%
CTGCACAGCCACGACTAGAA+TGG - tig0022980:35768-35787 Msa1403820:intron 55.0%
TCTACCTTCGCTGGAGGTTG+TGG + tig0022980:36558-36577 None:intergenic 55.0%
! ATGAGTAGCCCAGTAGTGGG+TGG - tig0022980:37045-37064 Msa1403820:intron 55.0%
TTGTTGGGCCACCCACTACT+GGG + tig0022980:37056-37075 None:intergenic 55.0%
TTTGTTGGGCCACCCACTAC+TGG + tig0022980:37057-37076 None:intergenic 55.0%
CGAGTTTGGGAGACTGCAGA+AGG - tig0022980:37244-37263 Msa1403820:intron 55.0%
GGAGCACAGCCCAAGAAATC+TGG - tig0022980:37293-37312 Msa1403820:intron 55.0%
TCTGGTGTTTACGACAGCCG+TGG - tig0022980:37973-37992 Msa1403820:CDS 55.0%
CCGTCTTAGACTCTCGTGCA+AGG - tig0022980:38607-38626 Msa1403820:intron 55.0%
TGCCTAATGTGGGGATTGGG+AGG - tig0022980:39514-39533 Msa1403820:CDS 55.0%
GCCTAATGTGGGGATTGGGA+GGG - tig0022980:39515-39534 Msa1403820:CDS 55.0%
ACCCTCCCAATCCCCACATT+AGG + tig0022980:39519-39538 None:intergenic 55.0%
GGGCGAGAGAGAAGCAGACA+AGG + tig0022980:31391-31410 None:intergenic 60.0%
GTCAATGGCGATGTGGCAGG+GGG + tig0022980:32372-32391 None:intergenic 60.0%
GGTCAATGGCGATGTGGCAG+GGG + tig0022980:32373-32392 None:intergenic 60.0%
AACAGCTCCCGACTCTCTGG+AGG + tig0022980:32942-32961 None:intergenic 60.0%
GGTGGTCGGGGTTTGAACCT+CGG + tig0022980:34473-34492 None:intergenic 60.0%
TAATTGTGCTCCGAGGGGCG+AGG + tig0022980:34713-34732 None:intergenic 60.0%
TGACAGGTGGCTCTCCCTTG+AGG - tig0022980:35649-35668 Msa1403820:intron 60.0%
GGTGGCTCTCCCTTGAGGTA+TGG - tig0022980:35654-35673 Msa1403820:intron 60.0%
GCTCTCCCTTGAGGTATGGG+AGG - tig0022980:35658-35677 Msa1403820:intron 60.0%
GTGTTTACGACAGCCGTGGC+TGG - tig0022980:37977-37996 Msa1403820:CDS 60.0%
CGACAGCCGTGGCTGGAAAT+AGG - tig0022980:37984-38003 Msa1403820:CDS 60.0%
! GGTGCCACAACCTCCAGCGA+AGG - tig0022980:36551-36570 Msa1403820:intron 65.0%
Chromosome Type Strat End Strand Name
tig0022980 gene 31103 39814 31103 ID=Msa1403820;Name=Msa1403820
tig0022980 mRNA 31103 39814 31103 ID=Msa1403820-mRNA-1;Parent=Msa1403820;Name=Msa1403820-mRNA-1;_AED=0.04;_eAED=0.04;_QI=125|1|1|1|0.8|1|6|335|293
tig0022980 exon 31103 31573 31103 ID=Msa1403820-mRNA-1:exon:19490;Parent=Msa1403820-mRNA-1
tig0022980 exon 32388 32446 32388 ID=Msa1403820-mRNA-1:exon:19489;Parent=Msa1403820-mRNA-1
tig0022980 exon 37949 38098 37949 ID=Msa1403820-mRNA-1:exon:19488;Parent=Msa1403820-mRNA-1
tig0022980 exon 38212 38328 38212 ID=Msa1403820-mRNA-1:exon:19487;Parent=Msa1403820-mRNA-1
tig0022980 exon 39154 39351 39154 ID=Msa1403820-mRNA-1:exon:19486;Parent=Msa1403820-mRNA-1
tig0022980 exon 39468 39814 39468 ID=Msa1403820-mRNA-1:exon:19485;Parent=Msa1403820-mRNA-1
tig0022980 five_prime_UTR 39690 39814 39690 ID=Msa1403820-mRNA-1:five_prime_utr;Parent=Msa1403820-mRNA-1
tig0022980 CDS 39468 39689 39468 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 CDS 39154 39351 39154 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 CDS 38212 38328 38212 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 CDS 37949 38098 37949 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 CDS 32388 32446 32388 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 CDS 31438 31573 31438 ID=Msa1403820-mRNA-1:cds;Parent=Msa1403820-mRNA-1
tig0022980 three_prime_UTR 31103 31437 31103 ID=Msa1403820-mRNA-1:three_prime_utr;Parent=Msa1403820-mRNA-1
Gene Sequence

>Msa1403820

ATGAGTGCCACTGCTACTTTAACTCCAAACTTGTTTGGGGGTTACTACACCACCAATACCATCATCGCTTCATCTTCATATCTATTCTATCCACATCCACATTATTATTCTTCTTTCAATAAGGACAAGCCAAACCCTAATTTCAATGCCTTCTCCTCCTCCTTGTCTGCTTCTCTCTCGCCCAAACCCAAACCCAAACCATCCCTCTCAACACGGACAACGTGTCTTTATGGACATAATAACATGAATAGAGATCAAGATCCCGATTACGAATTCCAGAATGGTCCAGGCTTATTTGATTCCGATGAAGAACAACTAGTAGGCACTCAAATTCCAACCCAGGTTCAAACTATGGTCGAAGGTTCAGGTTCCATCAGGGTATCCGACTACAACCCTGCTCCTGATGTTGATTATCTACAGGAGTTATTGGCTATTCAACAACAAGGACCTAGAGCTATTGGCTTTTTTGGAACACGAAACATGGGATTCATGCACCAGGAACTAATTGAGATTCTTAGCTATGCCATGGTTATAACTAAAAACCACATATACACATCTGGAGCATCTGGGACCAATGCAGCTGTTATTCGGGGTGCTTTAAGAGCAGAGAAACCAGAATTGCTTACAGTTATATTACCCCAAAGTTTAAGCAAACAGCCTCCAGAGAGTCGGGAGCTGTTATCCAAGGTGAAAAATGTGATAGAGAAGCCCTATAACGATCATCTACCTCTATTAGAAGCCAGCAGGCTATGTAATATGGATATCATTTCACACGTCCAGCAAGTCATCTGCTTTGCTTTCCATGACAGTAGGTTGCTCATGGAAACTTGTCAAGAAGCAAAAAATTTGCGGAAAATTGTGACTCTCTTCTACCTTGACTGA

Protein sequence

>Msa1403820

MSATATLTPNLFGGYYTTNTIIASSSYLFYPHPHYYSSFNKDKPNPNFNAFSSSLSASLSPKPKPKPSLSTRTTCLYGHNNMNRDQDPDYEFQNGPGLFDSDEEQLVGTQIPTQVQTMVEGSGSIRVSDYNPAPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLSKQPPESRELLSKVKNVIEKPYNDHLPLLEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD*