AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1342110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342110 MtrunA17_Chr2g0322661 95.759 448 17 2 1 447 1 447 0.0 885
Msa1342110 MtrunA17_Chr2g0310021 98.176 329 6 0 119 447 1 329 0.0 677
Msa1342110 MtrunA17_Chr6g0476711 45.845 373 190 4 80 446 52 418 1.04e-110 332
Msa1342110 MtrunA17_Chr5g0431221 44.809 366 178 5 95 437 53 417 4.75e-104 316
Msa1342110 MtrunA17_Chr1g0176431 38.525 366 213 8 88 446 36 396 6.47e-81 255
Msa1342110 MtrunA17_Chr2g0322841 36.149 296 162 2 137 432 55 323 1.07e-63 209
Msa1342110 MtrunA17_Chr2g0305661 55.128 78 26 4 1 73 1 74 8.85e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342110 AT5G57930.2 72.283 368 101 1 80 447 77 443 0.0 553
Msa1342110 AT5G57930.1 72.283 368 101 1 80 447 74 440 0.0 553
Msa1342110 AT1G64810.1 43.158 380 206 5 73 446 60 435 1.02e-108 328
Msa1342110 AT1G64810.2 43.158 380 206 5 73 446 84 459 1.47e-108 329
Msa1342110 AT5G61930.1 43.681 364 198 4 77 437 34 393 1.89e-101 308
Msa1342110 AT5G61930.2 43.681 364 198 4 77 437 34 393 1.89e-101 308
Msa1342110 AT3G21740.1 32.857 350 187 7 85 431 16 320 9.77e-60 199

Find 151 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGGTTATATTGTCTTTC+TGG 0.107665 tig0005174:+4775 Msa1342110:CDS
CACGAATAGGGAAAGAGTTT+TGG 0.227943 tig0005174:-4579 Msa1342110:intergenic
CTGGGGCCAACATGAATTTC+AGG 0.229614 tig0005174:-8649 Msa1342110:intergenic
TCCTCATTTGTTCCCATGCT+TGG 0.255654 tig0005174:-8573 Msa1342110:intergenic
ATGGCTTTAATCTCATTTCT+AGG 0.266614 tig0005174:+9356 Msa1342110:three_prime_UTR
TTCGAGAGTTTCCCACAAAA+AGG 0.289551 tig0005174:+8374 Msa1342110:CDS
TTCACTAGCAATCCATTCTT+TGG 0.294053 tig0005174:-7725 Msa1342110:intergenic
TTCTTCCCAATACGGATTAT+TGG 0.295755 tig0005174:-8406 Msa1342110:intergenic
CATCATATGCTTCTGGTATA+AGG 0.312803 tig0005174:-7751 Msa1342110:intergenic
ACCAAACACAACCACAATAT+TGG 0.323045 tig0005174:+4673 Msa1342110:CDS
ACCAATATTGTGGTTGTGTT+TGG 0.344619 tig0005174:-4674 Msa1342110:intergenic
GCATATGGAACTACACGAAT+AGG 0.346029 tig0005174:-4592 Msa1342110:intergenic
ATTATGTGGTTAGTTCTTGT+TGG 0.347037 tig0005174:+9034 Msa1342110:three_prime_UTR
GTAAATCCTGTGACATTCTC+TGG 0.354488 tig0005174:+9384 Msa1342110:three_prime_UTR
GACTTGAATGGATGTCCAAC+AGG 0.354842 tig0005174:-8157 Msa1342110:intergenic
CCATTCTTTGGCGCCGGCAT+TGG 0.357399 tig0005174:-7713 Msa1342110:intergenic
TTATGTGGTTAGTTCTTGTT+GGG 0.365019 tig0005174:+9035 Msa1342110:three_prime_UTR
CATGCTGCCCATTGCGTTGT+TGG 0.366370 tig0005174:-8708 Msa1342110:intergenic
ATTGTTGATTTATATTGTTC+TGG 0.374651 tig0005174:-8886 Msa1342110:intergenic
TTATACACATCATATGCTTC+TGG 0.384833 tig0005174:-7758 Msa1342110:intergenic
TTGTAGAAGATCTACAAAAT+TGG 0.386606 tig0005174:+9118 Msa1342110:three_prime_UTR
AACTCTTAAAGAAGCTGAAA+TGG 0.397356 tig0005174:+8933 Msa1342110:CDS
ACAAACACCAACAACGCAAT+GGG 0.400408 tig0005174:+8701 Msa1342110:CDS
TTAATCTCATTTCTAGGTAA+AGG 0.401120 tig0005174:+9362 Msa1342110:three_prime_UTR
CAAATTCCTTCTTCCCAATA+CGG 0.402113 tig0005174:-8414 Msa1342110:intergenic
AGGCTAGGAGGGTACCTGTT+TGG 0.408305 tig0005174:+9212 Msa1342110:three_prime_UTR
ATTGGCTTCCCACACGCATA+TGG 0.413894 tig0005174:-4607 Msa1342110:intergenic
GAAAGCCAATAATCCGTATT+GGG 0.415745 tig0005174:+8401 Msa1342110:CDS
CACAAACACCAACAACGCAA+TGG 0.418316 tig0005174:+8700 Msa1342110:CDS
ATTATTTCCTCCTTGTTCAC+TGG 0.419157 tig0005174:-8529 Msa1342110:intergenic
TTCATAATTGAGGTTAATCA+TGG 0.419896 tig0005174:-9276 Msa1342110:intergenic
CAACAATGCGCCTTGATGTC+GGG 0.421177 tig0005174:+8902 Msa1342110:CDS
CCAATGCCGGCGCCAAAGAA+TGG 0.421451 tig0005174:+7713 Msa1342110:CDS
CAAAATTGGTGTCAGGTTGA+TGG 0.424072 tig0005174:+9132 Msa1342110:three_prime_UTR
CAAGTAAAATATTTCCAAAC+AGG 0.432813 tig0005174:-9226 Msa1342110:intergenic
GTACATCCTCATTAGTCTCT+TGG 0.434855 tig0005174:-8602 Msa1342110:intergenic
TTGTCTTTCTGGAGGGAGAA+TGG 0.435712 tig0005174:+4786 Msa1342110:CDS
GTACCTTTACATGACTTGAA+TGG 0.436859 tig0005174:-8169 Msa1342110:intergenic
AGAAAGCCAATAATCCGTAT+TGG 0.437497 tig0005174:+8400 Msa1342110:CDS
ATGCAGAGCTCAACCACTGC+TGG 0.441347 tig0005174:-8334 Msa1342110:intergenic
TCAGCTTCTTTAAGAGTTGA+AGG 0.442885 tig0005174:-8928 Msa1342110:intergenic
GACATGATTGCAAGGAAGCT+TGG 0.444488 tig0005174:-9172 Msa1342110:intergenic
TCCTCGGCATTATTCGAGAA+AGG 0.445340 tig0005174:+7601 Msa1342110:CDS
CGTAGTTCAACAATGGGAAC+TGG 0.447244 tig0005174:-7638 Msa1342110:intergenic
CATATGGAACTACACGAATA+GGG 0.450707 tig0005174:-4591 Msa1342110:intergenic
GTCTCTCTCTCAAACACAAT+CGG 0.454144 tig0005174:+4640 Msa1342110:CDS
GAATTTCTACGGACAGGCTC+CGG 0.455934 tig0005174:+8825 Msa1342110:CDS
TCAACAATGGGAACTGGAAA+AGG 0.470165 tig0005174:-7632 Msa1342110:intergenic
TGTGGTGGAAATGTGCATTC+AGG 0.470274 tig0005174:+8849 Msa1342110:CDS
AGAGAGACCGTTGATGCCAT+TGG 0.471070 tig0005174:-4625 Msa1342110:intergenic
GGCACAAAGCTCAAAATTGT+GGG 0.472497 tig0005174:+8674 Msa1342110:CDS
AAAGTCAAAATTAATGCAGT+TGG 0.480517 tig0005174:+8995 Msa1342110:three_prime_UTR
AGTGGTGGTCCGTTTACATC+AGG 0.485410 tig0005174:-8787 Msa1342110:intergenic
AAATTCATGTTGGCCCCAGC+GGG 0.486646 tig0005174:+8653 Msa1342110:CDS
GATGTCCAACAGGGCCTACA+TGG 0.490856 tig0005174:-8147 Msa1342110:intergenic
AGATCTACAAAATTGGTGTC+AGG 0.494832 tig0005174:+9125 Msa1342110:three_prime_UTR
TATTGGGAAGAAGGAATTTG+TGG 0.495922 tig0005174:+8417 Msa1342110:CDS
AGCAATCCATTCTTTGGCGC+CGG 0.496028 tig0005174:-7719 Msa1342110:intergenic
GATTAACCTCAATTATGAAA+AGG 0.496352 tig0005174:+9280 Msa1342110:three_prime_UTR
GGGCACAAAGCTCAAAATTG+TGG 0.496832 tig0005174:+8673 Msa1342110:CDS
GTTGTGTGGGGAGGAATGGA+TGG 0.497177 tig0005174:-4535 Msa1342110:intergenic
GAAATCCATGTAGGCCCTGT+TGG 0.497522 tig0005174:+8142 Msa1342110:CDS
GGAGCAACTATATCTGAATC+CGG 0.501034 tig0005174:-8508 Msa1342110:intergenic
AATAATCCGTATTGGGAAGA+AGG 0.501252 tig0005174:+8408 Msa1342110:CDS
CGGACAGGCTCCGGCTGTGG+TGG 0.501720 tig0005174:+8834 Msa1342110:CDS
CTGAGGAAACACTCCAAGCA+TGG 0.502752 tig0005174:+8560 Msa1342110:CDS
TCCGCAAGGGCATTCATGAA+TGG 0.506124 tig0005174:+8203 Msa1342110:CDS
CAGCTATCAACGGTTGTGTA+GGG 0.507508 tig0005174:-8480 Msa1342110:intergenic
TTTCACCTCTATGATCGTCT+TGG 0.508754 tig0005174:+8268 Msa1342110:CDS
TAGTACCCGTGCATGCTTGT+GGG 0.512728 tig0005174:+7825 Msa1342110:CDS
TGGGGCCAACATGAATTTCA+GGG 0.515791 tig0005174:-8648 Msa1342110:intergenic
TAAATCCTGTGACATTCTCT+GGG 0.516055 tig0005174:+9385 Msa1342110:three_prime_UTR
AATACTAGAATAACATTATG+TGG 0.516949 tig0005174:+9020 Msa1342110:three_prime_UTR
CGGTTATATTGTCTTTCTGG+AGG 0.517532 tig0005174:+4778 Msa1342110:CDS
TTGAACTACGACGGGCAGCT+AGG 0.518556 tig0005174:+7651 Msa1342110:CDS
TGATTATGATGCAGCTTCCA+AGG 0.521646 tig0005174:+4825 Msa1342110:CDS
TCAGCTATCAACGGTTGTGT+AGG 0.522492 tig0005174:-8481 Msa1342110:intergenic
TCCCATTGTTGAACTACGAC+GGG 0.525008 tig0005174:+7643 Msa1342110:CDS
CGAGAGCTTAAGAATTTCTA+CGG 0.525937 tig0005174:+8814 Msa1342110:CDS
GGAACATGCCACACAAATCT+CGG 0.526596 tig0005174:-8766 Msa1342110:intergenic
TCAACAATGCGCCTTGATGT+CGG 0.526989 tig0005174:+8901 Msa1342110:CDS
ACCGTTGATAGCTGAAATAC+CGG 0.529110 tig0005174:+8489 Msa1342110:CDS
CATCCATTCAAGTCATGTAA+AGG 0.535813 tig0005174:+8166 Msa1342110:CDS
TAGAGGTGAAATGCGTCAAT+CGG 0.537159 tig0005174:-8256 Msa1342110:intergenic
AACGCAATGGGCAGCATGGT+TGG 0.540595 tig0005174:+8713 Msa1342110:CDS
AACAGAGATTCTCCATCCCT+CGG 0.542922 tig0005174:+8308 Msa1342110:CDS
CACTGCTGGAATCCGAGGGA+TGG 0.542954 tig0005174:-8320 Msa1342110:intergenic
ATGTACCACGTGAGGGTCTG+TGG 0.544175 tig0005174:+8619 Msa1342110:CDS
TGGCATGTTCCTGATGTAAA+CGG 0.545448 tig0005174:+8778 Msa1342110:CDS
GGTTATATTGTCTTTCTGGA+GGG 0.545916 tig0005174:+4779 Msa1342110:CDS
GCCAAGGAGAAAACCAATGC+CGG 0.547481 tig0005174:+7700 Msa1342110:CDS
TTCTTAAGCTCTCGTTCTAG+TGG 0.551263 tig0005174:-8805 Msa1342110:intergenic
CAGCTTCTTTAAGAGTTGAA+GGG 0.551992 tig0005174:-8927 Msa1342110:intergenic
GTTGAGCTCTGCATTCAAGC+TGG 0.552474 tig0005174:+8343 Msa1342110:CDS
CTTGGAGTGTTTCCTCAGCA+AGG 0.553502 tig0005174:-8555 Msa1342110:intergenic
TTGAAGGGATCCCGACATCA+AGG 0.558127 tig0005174:-8912 Msa1342110:intergenic
CATATGATGTGTATAATGCT+AGG 0.560221 tig0005174:+7765 Msa1342110:CDS
TGAACTACGACGGGCAGCTA+GGG 0.562440 tig0005174:+7652 Msa1342110:CDS
ATGCACATTTCCACCACAGC+CGG 0.563071 tig0005174:-8844 Msa1342110:intergenic
AGTTAAGTTTACCAATATTG+TGG 0.566622 tig0005174:-4684 Msa1342110:intergenic
TAATTACCCACAAGCATGCA+CGG 0.568910 tig0005174:-7831 Msa1342110:intergenic
CATCCCTCGGATTCCAGCAG+TGG 0.569277 tig0005174:+8321 Msa1342110:CDS
TATAGTTGCTCCAGTGAACA+AGG 0.574997 tig0005174:+8519 Msa1342110:CDS
TCAACCACTGCTGGAATCCG+AGG 0.576038 tig0005174:-8325 Msa1342110:intergenic
GTGGAAATGTGCATTCAGGC+TGG 0.577493 tig0005174:+8853 Msa1342110:CDS
TGGGAAGCCAATGGCATCAA+CGG 0.577594 tig0005174:+4618 Msa1342110:exon
TGCCCGTCGTAGTTCAACAA+TGG 0.579940 tig0005174:-7645 Msa1342110:intergenic
TTAAGCTCTCGTTCTAGTGG+TGG 0.579997 tig0005174:-8802 Msa1342110:intergenic
TCCATTCATGAATGCCCTTG+CGG 0.584521 tig0005174:-8204 Msa1342110:intergenic
TCCAAGCATGGGAACAAATG+AGG 0.587102 tig0005174:+8572 Msa1342110:CDS
TCCGGTATTTCAGCTATCAA+CGG 0.591524 tig0005174:-8490 Msa1342110:intergenic
AGAAGATGAAAGATGAGCCA+AGG 0.591809 tig0005174:+7684 Msa1342110:CDS
GTTGACAGGACATGATTGCA+AGG 0.593601 tig0005174:-9180 Msa1342110:intergenic
CGTGTAGTTCCATATGCGTG+TGG 0.597764 tig0005174:+4598 Msa1342110:five_prime_UTR
TACGACGGGCAGCTAGGGAG+AGG 0.599315 tig0005174:+7657 Msa1342110:CDS
AAAGCCCCAGAGAATGTCAC+AGG 0.602376 tig0005174:-9390 Msa1342110:intergenic
TTCCCATTGTTGAACTACGA+CGG 0.604042 tig0005174:+7642 Msa1342110:CDS
GGAAATAATCCACCTTGCTG+AGG 0.604198 tig0005174:+8543 Msa1342110:CDS
TGAGGAAACACTCCAAGCAT+GGG 0.604765 tig0005174:+8561 Msa1342110:CDS
CAACAACGCAATGGGCAGCA+TGG 0.607620 tig0005174:+8709 Msa1342110:CDS
CAACCACTGCTGGAATCCGA+GGG 0.607681 tig0005174:-8324 Msa1342110:intergenic
TATGTGGTTAGTTCTTGTTG+GGG 0.609523 tig0005174:+9036 Msa1342110:three_prime_UTR
TCCTTTCTCGAATAATGCCG+AGG 0.613103 tig0005174:-7602 Msa1342110:intergenic
TACACAGTCGAACATCCGCA+AGG 0.613806 tig0005174:+8189 Msa1342110:CDS
GAGGCGCCAAGAGACTAATG+AGG 0.615195 tig0005174:+8596 Msa1342110:CDS
CTTGTTGTAAAAGTATGACA+TGG 0.617143 tig0005174:+9337 Msa1342110:three_prime_UTR
GTAGTACCCGTGCATGCTTG+TGG 0.617486 tig0005174:+7824 Msa1342110:CDS
TTTGAGCTTTGTGCCCGCTG+GGG 0.618785 tig0005174:-8666 Msa1342110:intergenic
TATTGCCCTGAAATTCATGT+TGG 0.628271 tig0005174:+8643 Msa1342110:CDS
GAAATTCATGTTGGCCCCAG+CGG 0.630747 tig0005174:+8652 Msa1342110:CDS
GCTTTCCAAGACGATCATAG+AGG 0.631399 tig0005174:-8273 Msa1342110:intergenic
AATTACCCACAAGCATGCAC+GGG 0.635868 tig0005174:-7830 Msa1342110:intergenic
TAATGAGGATGTACCACGTG+AGG 0.636087 tig0005174:+8611 Msa1342110:CDS
GGAGTGTTTCCTCAGCAAGG+TGG 0.637703 tig0005174:-8552 Msa1342110:intergenic
TGATACCGCCGAGATTTGTG+TGG 0.637899 tig0005174:+8758 Msa1342110:CDS
TCTATGATCGTCTTGGAAAG+CGG 0.638858 tig0005174:+8275 Msa1342110:CDS
ATATGCGTGTGGGAAGCCAA+TGG 0.642526 tig0005174:+4609 Msa1342110:exon
TGGTGCAGTGAAATCCATGT+AGG 0.642614 tig0005174:+8133 Msa1342110:CDS
GTGTAGTTCCATATGCGTGT+GGG 0.646651 tig0005174:+4599 Msa1342110:five_prime_UTR
GCACAAAGCTCAAAATTGTG+GGG 0.649190 tig0005174:+8675 Msa1342110:CDS
TGAATGGACAAATGCACATG+TGG 0.654066 tig0005174:+8219 Msa1342110:CDS
GCATGGGAACAAATGAGGAG+AGG 0.663518 tig0005174:+8577 Msa1342110:CDS
ACTTGAATGGATGTCCAACA+GGG 0.677534 tig0005174:-8156 Msa1342110:intergenic
ACACAGTCGAACATCCGCAA+GGG 0.678137 tig0005174:+8190 Msa1342110:CDS
CAACTTTACAAGCAGGACAG+TGG 0.681325 tig0005174:+7539 Msa1342110:intron
AATGAGGATGTACCACGTGA+GGG 0.692974 tig0005174:+8612 Msa1342110:CDS
AGATCTTCTACAATGTGCTG+AGG 0.694071 tig0005174:-9108 Msa1342110:intergenic
AATATCCACAGACCCTCACG+TGG 0.720615 tig0005174:-8624 Msa1342110:intergenic
AAATCCTGTGACATTCTCTG+GGG 0.737625 tig0005174:+9386 Msa1342110:three_prime_UTR
AGTTGCTCCAGTGAACAAGG+AGG 0.748389 tig0005174:+8522 Msa1342110:CDS
ACATGCCACACAAATCTCGG+CGG 0.769535 tig0005174:-8763 Msa1342100:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTACTTTGTTTTTATAT+TGG - tig0005174:7318-7337 Msa1342110:intergenic 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - tig0005174:6375-6394 Msa1342110:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG - tig0005174:6376-6395 Msa1342110:intergenic 100.0%
! CCCCCCCCCCCCCCCCCCCC+CGG + tig0005174:6372-6391 Msa1342110:intron 100.0%
!! TCATAAAAAAATTGGATTAA+TGG + tig0005174:5966-5985 Msa1342110:intron 15.0%
!! TATCTTTGTTAATTTAGAAA+AGG - tig0005174:6238-6257 Msa1342110:intergenic 15.0%
!!! TTAACTTTTAAAAAGAAAAC+AGG - tig0005174:6424-6443 Msa1342110:intergenic 15.0%
!!! TGTTTTCTTTTTAAAAGTTA+AGG + tig0005174:6423-6442 Msa1342110:intron 15.0%
!!! AACTTTATTTGTATATTTGA+TGG + tig0005174:6449-6468 Msa1342110:intron 15.0%
!!! ACTTTATTTGTATATTTGAT+GGG + tig0005174:6450-6469 Msa1342110:intron 15.0%
!! ATCAATATCAGTATATTAAT+TGG + tig0005174:6581-6600 Msa1342110:intron 15.0%
!!! AATGATACTGATTATATATA+AGG + tig0005174:6798-6817 Msa1342110:intron 15.0%
!! ATGAAATACAGAAAATTTAT+TGG - tig0005174:8011-8030 Msa1342110:intergenic 15.0%
!!! TAATCCAATTTTTTTATGAG+AGG - tig0005174:5965-5984 Msa1342110:intergenic 20.0%
!!! TTTCTTTTTAAAAGTTAAGG+TGG + tig0005174:6426-6445 Msa1342110:intron 20.0%
!!! CTTTATTTGTATATTTGATG+GGG + tig0005174:6451-6470 Msa1342110:intron 20.0%
!! AAATAGATATAGAAATACCA+AGG - tig0005174:6535-6554 Msa1342110:intergenic 20.0%
!! TTCTATATCTATTTATCATC+CGG + tig0005174:6541-6560 Msa1342110:intron 20.0%
!! TCAGTAATTTATGTTCTTAT+AGG - tig0005174:6680-6699 Msa1342110:intergenic 20.0%
!! TATAAGAACATAAATTACTG+AGG + tig0005174:6679-6698 Msa1342110:intron 20.0%
!! TTATATATAATCAGTATCAC+AGG - tig0005174:6750-6769 Msa1342110:intergenic 20.0%
!!! TGTGATACTGATTATATATA+AGG + tig0005174:6749-6768 Msa1342110:intron 20.0%
!! TAAGGATAGTAAAAACTATT+TGG + tig0005174:6767-6786 Msa1342110:intron 20.0%
!! TAAGGATAGTAAAAACTATT+TGG + tig0005174:6767-6786 Msa1342110:intron 20.0%
!! ATATTTATATTGCTTGATTG+AGG + tig0005174:6912-6931 Msa1342110:intron 20.0%
!! TTTATAATGGTCAAAATGTT+AGG - tig0005174:6961-6980 Msa1342110:intergenic 20.0%
!!! AATGAAGCAATTTTCATTTT+AGG - tig0005174:7019-7038 Msa1342110:intergenic 20.0%
!!! TTTTTGTTACATAAAGTATC+TGG - tig0005174:7977-7996 Msa1342110:intergenic 20.0%
!!! ATTGTTGATTTATATTGTTC+TGG - tig0005174:8889-8908 Msa1342110:intergenic 20.0%
!! AATACTAGAATAACATTATG+TGG + tig0005174:9020-9039 Msa1342110:three_prime_UTR 20.0%
! AGTTAAGTTTACCAATATTG+TGG - tig0005174:4687-4706 Msa1342110:intergenic 25.0%
! AAAACAAAGTTAACTAACCT+TGG - tig0005174:4845-4864 Msa1342110:intergenic 25.0%
!! TGATACCATCTTAGAATTTT+GGG - tig0005174:5182-5201 Msa1342110:intergenic 25.0%
! TAGAGTATGCAAAATAGATT+CGG - tig0005174:5398-5417 Msa1342110:intergenic 25.0%
! ATTGAAAAACATGCATCAAA+TGG - tig0005174:5478-5497 Msa1342110:intergenic 25.0%
! TCTATGTTAGGAAGAAAAAA+GGG + tig0005174:5539-5558 Msa1342110:intron 25.0%
!!! AGAGAGGATTTTTTATTTGA+TGG + tig0005174:5910-5929 Msa1342110:intron 25.0%
! TTGTCCTCTCATAAAAAAAT+TGG + tig0005174:5958-5977 Msa1342110:intron 25.0%
! AGCTTGGAAAAACATAAAAA+GGG - tig0005174:6138-6157 Msa1342110:intergenic 25.0%
! TGGTATTAGCAAAAAAAAAC+CGG - tig0005174:6395-6414 Msa1342110:intergenic 25.0%
! AAAAAGAAAACAGGTATGTT+TGG - tig0005174:6415-6434 Msa1342110:intergenic 25.0%
! ATAATGTAATTCACCAAATC+CGG - tig0005174:6563-6582 Msa1342110:intergenic 25.0%
!! AGTATATTAATTGGTAGTTG+TGG + tig0005174:6590-6609 Msa1342110:intron 25.0%
! TTTAATGAAGCATGATTCTT+TGG + tig0005174:6631-6650 Msa1342110:intron 25.0%
!! TTTATGTTCTTATAGGTTGA+TGG - tig0005174:6673-6692 Msa1342110:intergenic 25.0%
! GTAAAAACTATTTGGTTGAA+AGG + tig0005174:6775-6794 Msa1342110:intron 25.0%
! GTAAAAACTATTTGGTTGAA+AGG + tig0005174:6775-6794 Msa1342110:intron 25.0%
!!! CATTTTGACCATTATAAATC+CGG + tig0005174:6963-6982 Msa1342110:intron 25.0%
!! TTCATTGAGTTTTTGTCATT+TGG + tig0005174:6993-7012 Msa1342110:intron 25.0%
! TCTAATAACAATAAAACACG+AGG - tig0005174:7257-7276 Msa1342110:intergenic 25.0%
! AACAAAACAGTTATATACAG+AGG - tig0005174:7502-7521 Msa1342110:intergenic 25.0%
!! CTACACAAAATTTCATGTTT+TGG + tig0005174:7892-7911 Msa1342110:intron 25.0%
! AATACAGAAAATTTATTGGC+AGG - tig0005174:8007-8026 Msa1342110:intergenic 25.0%
!! TAATTTTTCCAACATGAGTA+AGG - tig0005174:8107-8126 Msa1342110:intergenic 25.0%
! AAAGTCAAAATTAATGCAGT+TGG + tig0005174:8995-9014 Msa1342110:three_prime_UTR 25.0%
! TTGTAGAAGATCTACAAAAT+TGG + tig0005174:9118-9137 Msa1342110:three_prime_UTR 25.0%
! CAAGTAAAATATTTCCAAAC+AGG - tig0005174:9229-9248 Msa1342110:intergenic 25.0%
!! TTTGGAAATATTTTACTTGC+TGG + tig0005174:9230-9249 Msa1342110:three_prime_UTR 25.0%
! TTCATAATTGAGGTTAATCA+TGG - tig0005174:9279-9298 Msa1342110:intergenic 25.0%
! GATTAACCTCAATTATGAAA+AGG + tig0005174:9280-9299 Msa1342110:three_prime_UTR 25.0%
!! TTAATCTCATTTCTAGGTAA+AGG + tig0005174:9362-9381 Msa1342110:three_prime_UTR 25.0%
TTTCGGTTATATTGTCTTTC+TGG + tig0005174:4775-4794 Msa1342110:CDS 30.0%
TTACAAACACTAGACAATGT+GGG - tig0005174:5017-5036 Msa1342110:intergenic 30.0%
TTTACAAACACTAGACAATG+TGG - tig0005174:5018-5037 Msa1342110:intergenic 30.0%
ATAGCAGAAACCTGATTATA+AGG - tig0005174:5057-5076 Msa1342110:intergenic 30.0%
GTCTGAACATGAGTTTAATT+AGG + tig0005174:5151-5170 Msa1342110:intron 30.0%
! CTGATACCATCTTAGAATTT+TGG - tig0005174:5183-5202 Msa1342110:intergenic 30.0%
AGATATGCATACTCTTCTAA+AGG + tig0005174:5280-5299 Msa1342110:intron 30.0%
GATATGCATACTCTTCTAAA+GGG + tig0005174:5281-5300 Msa1342110:intron 30.0%
AAAAACATGCATCAAATGGA+AGG - tig0005174:5474-5493 Msa1342110:intergenic 30.0%
CTCTATGTTAGGAAGAAAAA+AGG + tig0005174:5538-5557 Msa1342110:intron 30.0%
CTATGTTAGGAAGAAAAAAG+GGG + tig0005174:5540-5559 Msa1342110:intron 30.0%
GAAGCTAACCAAAAATAATC+AGG + tig0005174:5562-5581 Msa1342110:intron 30.0%
! CTATACGACCTGATTATTTT+TGG - tig0005174:5573-5592 Msa1342110:intergenic 30.0%
AAAATAATCAGGTCGTATAG+AGG + tig0005174:5573-5592 Msa1342110:intron 30.0%
! AACTTTGTTATGAGGTACTA+TGG + tig0005174:5624-5643 Msa1342110:intron 30.0%
! ACTTTGTTATGAGGTACTAT+GGG + tig0005174:5625-5644 Msa1342110:intron 30.0%
TATTTCCACAATACACTCTT+TGG + tig0005174:5773-5792 Msa1342110:intron 30.0%
!!! TTCTGTTACTGTTAGTTTTC+TGG + tig0005174:5824-5843 Msa1342110:intron 30.0%
! GAAATTTGATGATCTAAGAG+AGG + tig0005174:5894-5913 Msa1342110:intron 30.0%
AATTGGATTAATGGAGAGAT+AGG + tig0005174:5975-5994 Msa1342110:intron 30.0%
ACATCACAAAAATCACTCTA+GGG - tig0005174:6104-6123 Msa1342110:intergenic 30.0%
TACATCACAAAAATCACTCT+AGG - tig0005174:6105-6124 Msa1342110:intergenic 30.0%
CAGCTTGGAAAAACATAAAA+AGG - tig0005174:6139-6158 Msa1342110:intergenic 30.0%
!! ACGCTTTAGGAAAAATCAAA+GGG - tig0005174:6171-6190 Msa1342110:intergenic 30.0%
TGTGTGATTGAAATGTTGTA+TGG + tig0005174:6283-6302 Msa1342110:intron 30.0%
TATTAGCAAAAAAAAACCGG+GGG - tig0005174:6392-6411 Msa1342110:intergenic 30.0%
GTATTAGCAAAAAAAAACCG+GGG - tig0005174:6393-6412 Msa1342110:intergenic 30.0%
GGTATTAGCAAAAAAAAACC+GGG - tig0005174:6394-6413 Msa1342110:intergenic 30.0%
! TTTTAGCAGAATCATGTCAT+TGG + tig0005174:6475-6494 Msa1342110:intron 30.0%
GAAATTGTTCTTTAACTCCT+TGG + tig0005174:6515-6534 Msa1342110:intron 30.0%
ATCTATTTATCATCCGGATT+TGG + tig0005174:6547-6566 Msa1342110:intron 30.0%
ACTATTTGGTTGAAAGGAAT+TGG + tig0005174:6781-6800 Msa1342110:intron 30.0%
AATATGCCAGAATTTGTATC+TGG - tig0005174:6897-6916 Msa1342110:intergenic 30.0%
TTTATATTGCTTGATTGAGG+TGG + tig0005174:6915-6934 Msa1342110:intron 30.0%
TTATATTGCTTGATTGAGGT+GGG + tig0005174:6916-6935 Msa1342110:intron 30.0%
AAACTTGACCGGATTTATAA+TGG - tig0005174:6974-6993 Msa1342110:intergenic 30.0%
AAACTCAATGAAAACTTGAC+CGG - tig0005174:6985-7004 Msa1342110:intergenic 30.0%
TTCTAATAGCCAGTTTATCA+TGG - tig0005174:7099-7118 Msa1342110:intergenic 30.0%
CAAATTGTATCCATTCTAGA+AGG - tig0005174:7453-7472 Msa1342110:intergenic 30.0%
!! CTTCTAGAATGGATACAATT+TGG + tig0005174:7451-7470 Msa1342110:intron 30.0%
TTATACACATCATATGCTTC+TGG - tig0005174:7761-7780 Msa1342110:intergenic 30.0%
CATATGATGTGTATAATGCT+AGG + tig0005174:7765-7784 Msa1342110:CDS 30.0%
!!! ATGTTTTGGTTTTGATTGAG+TGG + tig0005174:7906-7925 Msa1342110:intron 30.0%
!!! TCAAAGCACATTTTTTGAGT+AGG - tig0005174:8081-8100 Msa1342110:intergenic 30.0%
TCATGTTGGAAAAATTATGC+AGG + tig0005174:8110-8129 Msa1342110:intron 30.0%
AACTCTTAAAGAAGCTGAAA+TGG + tig0005174:8933-8952 Msa1342110:CDS 30.0%
! ATTATGTGGTTAGTTCTTGT+TGG + tig0005174:9034-9053 Msa1342110:three_prime_UTR 30.0%
! TTATGTGGTTAGTTCTTGTT+GGG + tig0005174:9035-9054 Msa1342110:three_prime_UTR 30.0%
!! ATATTTTACTTGCTGGACAT+TGG + tig0005174:9237-9256 Msa1342110:three_prime_UTR 30.0%
!!! TACTAGCCTTTTCATAATTG+AGG - tig0005174:9289-9308 Msa1342110:intergenic 30.0%
! TGTCATACTTTTACAACAAG+TGG - tig0005174:9337-9356 Msa1342110:intergenic 30.0%
! CTTGTTGTAAAAGTATGACA+TGG + tig0005174:9337-9356 Msa1342110:three_prime_UTR 30.0%
!! ATGGCTTTAATCTCATTTCT+AGG + tig0005174:9356-9375 Msa1342110:three_prime_UTR 30.0%
!!! GGATGGATAGAGTTTTGTTT+GGG - tig0005174:4521-4540 None:intergenic 35.0%
!!! TGGATGGATAGAGTTTTGTT+TGG - tig0005174:4522-4541 None:intergenic 35.0%
! ACGAATAGGGAAAGAGTTTT+GGG - tig0005174:4581-4600 None:intergenic 35.0%
CATATGGAACTACACGAATA+GGG - tig0005174:4594-4613 None:intergenic 35.0%
ACCAAACACAACCACAATAT+TGG + tig0005174:4673-4692 Msa1342110:CDS 35.0%
ACCAATATTGTGGTTGTGTT+TGG - tig0005174:4677-4696 Msa1342110:intergenic 35.0%
! ACATTTTCGCGTCGAAAAAT+TGG + tig0005174:4736-4755 Msa1342110:CDS 35.0%
! GATACGGTCATAGATGTTTT+CGG + tig0005174:4758-4777 Msa1342110:CDS 35.0%
GGTTATATTGTCTTTCTGGA+GGG + tig0005174:4779-4798 Msa1342110:CDS 35.0%
! ACGACGCAATAAAGGTTTTA+AGG - tig0005174:4935-4954 Msa1342110:intergenic 35.0%
ACCCAAATGTCACAATTAAG+CGG - tig0005174:4965-4984 Msa1342110:intergenic 35.0%
TACAAACACTAGACAATGTG+GGG - tig0005174:5016-5035 Msa1342110:intergenic 35.0%
TGTCTAGTGTTTGTAAAGCT+TGG + tig0005174:5021-5040 Msa1342110:intron 35.0%
GTCTAGTGTTTGTAAAGCTT+GGG + tig0005174:5022-5041 Msa1342110:intron 35.0%
TTACCACATTGGATGAGATA+AGG + tig0005174:5129-5148 Msa1342110:intron 35.0%
!! ACCATCTTAGAATTTTGGGT+CGG - tig0005174:5178-5197 Msa1342110:intergenic 35.0%
!! TTGGTCTGTTGTTTGTTGTT+GGG + tig0005174:5211-5230 Msa1342110:intron 35.0%
! CAAAATAGATTCGGTAAGTG+TGG - tig0005174:5389-5408 Msa1342110:intergenic 35.0%
AGTTTAGATGTCATGTGCTT+GGG - tig0005174:5442-5461 Msa1342110:intergenic 35.0%
AAGTTTAGATGTCATGTGCT+TGG - tig0005174:5443-5462 Msa1342110:intergenic 35.0%
AGAATCGTTATTGTTAGTCG+CGG + tig0005174:5667-5686 Msa1342110:intron 35.0%
GAGTGTATTGTGGAAATAGA+AGG - tig0005174:5771-5790 Msa1342110:intergenic 35.0%
! ATTTCCCTTCTTTTGCTCTA+CGG - tig0005174:5879-5898 Msa1342110:intergenic 35.0%
! TTATCACACACTAGTCTCAT+GGG + tig0005174:6013-6032 Msa1342110:intron 35.0%
! TATGTTTTTCCAAGCTGAGT+TGG + tig0005174:6142-6161 Msa1342110:intron 35.0%
!! CACGCTTTAGGAAAAATCAA+AGG - tig0005174:6172-6191 Msa1342110:intergenic 35.0%
! TTTTTCCTAAAGCGTGTGTT+TGG + tig0005174:6176-6195 Msa1342110:intron 35.0%
!!! AGGGTTTTGGAAGTATATTG+GGG - tig0005174:6344-6363 Msa1342110:intergenic 35.0%
!!! GAGGGTTTTGGAAGTATATT+GGG - tig0005174:6345-6364 Msa1342110:intergenic 35.0%
ATTAGCAAAAAAAAACCGGG+GGG - tig0005174:6391-6410 Msa1342110:intergenic 35.0%
!! TCTTATAGGTTGATGGTTTC+CGG - tig0005174:6666-6685 Msa1342110:intergenic 35.0%
GAGATACCAGATACAAATTC+TGG + tig0005174:6888-6907 Msa1342110:intron 35.0%
TATATTGCTTGATTGAGGTG+GGG + tig0005174:6917-6936 Msa1342110:intron 35.0%
GCAGATGTAGGGAAAAAAAA+AGG + tig0005174:7155-7174 Msa1342110:intron 35.0%
ATTCCATCACATGTCATTAG+AGG + tig0005174:7198-7217 Msa1342110:intron 35.0%
GGTTGTGTTTATAAGCAGTT+CGG - tig0005174:7297-7316 Msa1342110:intergenic 35.0%
TAGAAGGCTAATTCTAGTGA+GGG - tig0005174:7437-7456 Msa1342110:intergenic 35.0%
!! CTAGAATTAGCCTTCTAGAA+TGG + tig0005174:7440-7459 Msa1342110:intron 35.0%
TGCTTGTAAAGTTGAGATGA+AGG - tig0005174:7533-7552 Msa1342110:intergenic 35.0%
TTCATCTCAACTTTACAAGC+AGG + tig0005174:7532-7551 Msa1342110:intron 35.0%
!!! CTCAAAATGCTGATTTTCCT+CGG + tig0005174:7585-7604 Msa1342110:CDS 35.0%
TTCACTAGCAATCCATTCTT+TGG - tig0005174:7728-7747 Msa1342110:intergenic 35.0%
CATCATATGCTTCTGGTATA+AGG - tig0005174:7754-7773 Msa1342110:intergenic 35.0%
TCAATAGTATGCTAGAGGAT+AGG - tig0005174:7868-7887 Msa1342110:intergenic 35.0%
GTTTGTCAATAGTATGCTAG+AGG - tig0005174:7873-7892 Msa1342110:intergenic 35.0%
!!! AAGCACATTTTTTGAGTAGG+AGG - tig0005174:8078-8097 Msa1342110:intergenic 35.0%
TTTGATGTCCTTACTCATGT+TGG + tig0005174:8096-8115 Msa1342110:intron 35.0%
TGTTGGAAAAATTATGCAGG+TGG + tig0005174:8113-8132 Msa1342110:intron 35.0%
CATCCATTCAAGTCATGTAA+AGG + tig0005174:8166-8185 Msa1342110:CDS 35.0%
GTACCTTTACATGACTTGAA+TGG - tig0005174:8172-8191 Msa1342110:intergenic 35.0%
AGAAAGCCAATAATCCGTAT+TGG + tig0005174:8400-8419 Msa1342110:CDS 35.0%
GAAAGCCAATAATCCGTATT+GGG + tig0005174:8401-8420 Msa1342110:CDS 35.0%
! TTCTTCCCAATACGGATTAT+TGG - tig0005174:8409-8428 Msa1342110:intergenic 35.0%
AATAATCCGTATTGGGAAGA+AGG + tig0005174:8408-8427 Msa1342110:CDS 35.0%
CAAATTCCTTCTTCCCAATA+CGG - tig0005174:8417-8436 Msa1342110:intergenic 35.0%
TATTGGGAAGAAGGAATTTG+TGG + tig0005174:8417-8436 Msa1342110:CDS 35.0%
ATTATTTCCTCCTTGTTCAC+TGG - tig0005174:8532-8551 Msa1342110:intergenic 35.0%
TATTGCCCTGAAATTCATGT+TGG + tig0005174:8643-8662 Msa1342110:CDS 35.0%
CGAGAGCTTAAGAATTTCTA+CGG + tig0005174:8814-8833 Msa1342110:CDS 35.0%
! CAGCTTCTTTAAGAGTTGAA+GGG - tig0005174:8930-8949 Msa1342110:intergenic 35.0%
! TCAGCTTCTTTAAGAGTTGA+AGG - tig0005174:8931-8950 Msa1342110:intergenic 35.0%
! TATGTGGTTAGTTCTTGTTG+GGG + tig0005174:9036-9055 Msa1342110:three_prime_UTR 35.0%
! AGATCTACAAAATTGGTGTC+AGG + tig0005174:9125-9144 Msa1342110:three_prime_UTR 35.0%
!! GTCCTGTCAACTTTTTAAGA+AGG + tig0005174:9192-9211 Msa1342110:three_prime_UTR 35.0%
AGCCTTCTTAAAAAGTTGAC+AGG - tig0005174:9197-9216 Msa1342110:intergenic 35.0%
!! GTCAACTTTTTAAGAAGGCT+AGG + tig0005174:9197-9216 Msa1342110:three_prime_UTR 35.0%
!! AACTTTTTAAGAAGGCTAGG+AGG + tig0005174:9200-9219 Msa1342110:three_prime_UTR 35.0%
!! ACTTTTTAAGAAGGCTAGGA+GGG + tig0005174:9201-9220 Msa1342110:three_prime_UTR 35.0%
TAAATCCTGTGACATTCTCT+GGG + tig0005174:9385-9404 Msa1342110:three_prime_UTR 35.0%
!!! AGAACTGGTTTTGTTGTGTG+GGG - tig0005174:4550-4569 None:intergenic 40.0%
!!! CAGAACTGGTTTTGTTGTGT+GGG - tig0005174:4551-4570 None:intergenic 40.0%
!!! ACAGAACTGGTTTTGTTGTG+TGG - tig0005174:4552-4571 None:intergenic 40.0%
!!! TTTTGGGTTTCTGACAGAAC+TGG - tig0005174:4565-4584 None:intergenic 40.0%
! CACGAATAGGGAAAGAGTTT+TGG - tig0005174:4582-4601 None:intergenic 40.0%
GCATATGGAACTACACGAAT+AGG - tig0005174:4595-4614 None:intergenic 40.0%
GTCTCTCTCTCAAACACAAT+CGG + tig0005174:4640-4659 Msa1342110:CDS 40.0%
TCGCGTCGAAAAATTGGATA+CGG + tig0005174:4742-4761 Msa1342110:CDS 40.0%
CGGTTATATTGTCTTTCTGG+AGG + tig0005174:4778-4797 Msa1342110:CDS 40.0%
TGATTATGATGCAGCTTCCA+AGG + tig0005174:4825-4844 Msa1342110:CDS 40.0%
ATGTCACAATTAAGCGGCTA+GGG - tig0005174:4959-4978 Msa1342110:intergenic 40.0%
AATGTCACAATTAAGCGGCT+AGG - tig0005174:4960-4979 Msa1342110:intergenic 40.0%
AGCCGCTTAATTGTGACATT+TGG + tig0005174:4960-4979 Msa1342110:intron 40.0%
GCCGCTTAATTGTGACATTT+GGG + tig0005174:4961-4980 Msa1342110:intron 40.0%
! TTTGTTGTGTTGGGTGTGAA+GGG + tig0005174:4989-5008 Msa1342110:intron 40.0%
GCAACACTCACCTTATAATC+AGG + tig0005174:5044-5063 Msa1342110:intron 40.0%
GTTTCTGCTATTGTACCACT+CGG + tig0005174:5066-5085 Msa1342110:intron 40.0%
TTTCTGCTATTGTACCACTC+GGG + tig0005174:5067-5086 Msa1342110:intron 40.0%
AGACCTTATCTCATCCAATG+TGG - tig0005174:5135-5154 Msa1342110:intergenic 40.0%
!! CCATCTTAGAATTTTGGGTC+GGG - tig0005174:5177-5196 Msa1342110:intergenic 40.0%
CAACAACAAACAACAGACCA+AGG - tig0005174:5212-5231 Msa1342110:intergenic 40.0%
!! CTTGGTCTGTTGTTTGTTGT+TGG + tig0005174:5210-5229 Msa1342110:intron 40.0%
TTGTTGGGCTTCTTGTATCT+TGG + tig0005174:5226-5245 Msa1342110:intron 40.0%
! TCGGTAAGTGTGGTTTTCTA+AGG - tig0005174:5379-5398 Msa1342110:intergenic 40.0%
! AGGAATGAGCTTTAGTGTGA+GGG + tig0005174:5601-5620 Msa1342110:intron 40.0%
! TGTGAGGGAACTTTGTTATG+AGG + tig0005174:5616-5635 Msa1342110:intron 40.0%
! GGGAATTGCATTTTCTCTGT+TGG + tig0005174:5693-5712 Msa1342110:intron 40.0%
TCCACAATACACTCTTTGGT+TGG + tig0005174:5777-5796 Msa1342110:intron 40.0%
TGATCCGTAGAGCAAAAGAA+GGG + tig0005174:5872-5891 Msa1342110:intron 40.0%
! GTTATCACACACTAGTCTCA+TGG + tig0005174:6012-6031 Msa1342110:intron 40.0%
! TATCACACACTAGTCTCATG+GGG + tig0005174:6014-6033 Msa1342110:intron 40.0%
! TGTGTTTGGATGGAGGATTT+TGG + tig0005174:6190-6209 Msa1342110:intron 40.0%
!!! GGAGGGTTTTGGAAGTATAT+TGG - tig0005174:6346-6365 Msa1342110:intergenic 40.0%
TTAGCAAAAAAAAACCGGGG+GGG - tig0005174:6390-6409 Msa1342110:intergenic 40.0%
! GATTCTTTGGTAACTCGATC+CGG + tig0005174:6644-6663 Msa1342110:intron 40.0%
CATGACAAGCCATGATAAAC+TGG + tig0005174:7087-7106 Msa1342110:intron 40.0%
CTACATCTGCAATATTGCAC+GGG - tig0005174:7145-7164 Msa1342110:intergenic 40.0%
CCTACATCTGCAATATTGCA+CGG - tig0005174:7146-7165 Msa1342110:intergenic 40.0%
CGTGCAATATTGCAGATGTA+GGG + tig0005174:7144-7163 Msa1342110:intron 40.0%
CTAGAAGGCTAATTCTAGTG+AGG - tig0005174:7438-7457 Msa1342110:intergenic 40.0%
! CGAGGAAAATCAGCATTTTG+AGG - tig0005174:7587-7606 Msa1342110:intergenic 40.0%
TCAACAATGGGAACTGGAAA+AGG - tig0005174:7635-7654 Msa1342110:intergenic 40.0%
TTCCCATTGTTGAACTACGA+CGG + tig0005174:7642-7661 Msa1342110:CDS 40.0%
AGAAGATGAAAGATGAGCCA+AGG + tig0005174:7684-7703 Msa1342110:CDS 40.0%
TAATTACCCACAAGCATGCA+CGG - tig0005174:7834-7853 Msa1342110:intergenic 40.0%
TAGTATGCTAGAGGATAGGA+AGG - tig0005174:7864-7883 Msa1342110:intergenic 40.0%
!! ATACATACCGCTGTTGTTTC+TGG + tig0005174:7937-7956 Msa1342110:intron 40.0%
TATGAAGCCAGAAACAACAG+CGG - tig0005174:7947-7966 Msa1342110:intergenic 40.0%
ACTTGAATGGATGTCCAACA+GGG - tig0005174:8159-8178 Msa1342110:intergenic 40.0%
TGAATGGACAAATGCACATG+TGG + tig0005174:8219-8238 Msa1342110:CDS 40.0%
TAGAGGTGAAATGCGTCAAT+CGG - tig0005174:8259-8278 Msa1342110:intergenic 40.0%
TTTCACCTCTATGATCGTCT+TGG + tig0005174:8268-8287 Msa1342110:CDS 40.0%
TCTATGATCGTCTTGGAAAG+CGG + tig0005174:8275-8294 Msa1342110:CDS 40.0%
TTCGAGAGTTTCCCACAAAA+AGG + tig0005174:8374-8393 Msa1342110:CDS 40.0%
! GGCTTTCTTCTCCTTTTTGT+GGG - tig0005174:8388-8407 Msa1342110:intergenic 40.0%
! TGGCTTTCTTCTCCTTTTTG+TGG - tig0005174:8389-8408 Msa1342110:intergenic 40.0%
!! ACCGTTGATAGCTGAAATAC+CGG + tig0005174:8489-8508 Msa1342110:CDS 40.0%
TCCGGTATTTCAGCTATCAA+CGG - tig0005174:8493-8512 Msa1342110:intergenic 40.0%
GGAGCAACTATATCTGAATC+CGG - tig0005174:8511-8530 Msa1342110:intergenic 40.0%
TATAGTTGCTCCAGTGAACA+AGG + tig0005174:8519-8538 Msa1342110:CDS 40.0%
! GTACATCCTCATTAGTCTCT+TGG - tig0005174:8605-8624 Msa1342110:intergenic 40.0%
GGCACAAAGCTCAAAATTGT+GGG + tig0005174:8674-8693 Msa1342110:CDS 40.0%
GCACAAAGCTCAAAATTGTG+GGG + tig0005174:8675-8694 Msa1342110:CDS 40.0%
ACAAACACCAACAACGCAAT+GGG + tig0005174:8701-8720 Msa1342110:CDS 40.0%
TGGCATGTTCCTGATGTAAA+CGG + tig0005174:8778-8797 Msa1342110:CDS 40.0%
TTCTTAAGCTCTCGTTCTAG+TGG - tig0005174:8808-8827 Msa1342110:intergenic 40.0%
GCTTAAGAATTTCTACGGAC+AGG + tig0005174:8819-8838 Msa1342110:CDS 40.0%
AGATCTTCTACAATGTGCTG+AGG - tig0005174:9111-9130 Msa1342110:intergenic 40.0%
!! CAAAATTGGTGTCAGGTTGA+TGG + tig0005174:9132-9151 Msa1342110:three_prime_UTR 40.0%
GTAAATCCTGTGACATTCTC+TGG + tig0005174:9384-9403 Msa1342110:three_prime_UTR 40.0%
AAATCCTGTGACATTCTCTG+GGG + tig0005174:9386-9405 Msa1342110:three_prime_UTR 40.0%
!! TTTTGTTGTGTGGGGAGGAA+TGG - tig0005174:4542-4561 None:intergenic 45.0%
GTGTAGTTCCATATGCGTGT+GGG + tig0005174:4599-4618 Msa1342110:five_prime_UTR 45.0%
! TTGTCTTTCTGGAGGGAGAA+TGG + tig0005174:4786-4805 Msa1342110:CDS 45.0%
TGTCACAATTAAGCGGCTAG+GGG - tig0005174:4958-4977 Msa1342110:intergenic 45.0%
! TTGGGTTGCCTTTGTTGTGT+TGG + tig0005174:4979-4998 Msa1342110:intron 45.0%
! TGGGTTGCCTTTGTTGTGTT+GGG + tig0005174:4980-4999 Msa1342110:intron 45.0%
CTTCACACCCAACACAACAA+AGG - tig0005174:4990-5009 Msa1342110:intergenic 45.0%
! CTTTGTTGTGTTGGGTGTGA+AGG + tig0005174:4988-5007 Msa1342110:intron 45.0%
TTGTTGTGTTGGGTGTGAAG+GGG + tig0005174:4990-5009 Msa1342110:intron 45.0%
ACTCCAGATGTCTTAGTCCT+GGG + tig0005174:5094-5113 Msa1342110:intron 45.0%
! CCCGACCCAAAATTCTAAGA+TGG + tig0005174:5174-5193 Msa1342110:intron 45.0%
GATGGTATCAGAGCATACCT+TGG + tig0005174:5192-5211 Msa1342110:intron 45.0%
! GCATACTCTTCTAAAGGGCA+CGG + tig0005174:5286-5305 Msa1342110:intron 45.0%
! CATACTCTTCTAAAGGGCAC+GGG + tig0005174:5287-5306 Msa1342110:intron 45.0%
! ATACTCTTCTAAAGGGCACG+GGG + tig0005174:5288-5307 Msa1342110:intron 45.0%
! GCATCAAATGGAAGGAGTAC+TGG - tig0005174:5466-5485 Msa1342110:intergenic 45.0%
! GAGGAATGAGCTTTAGTGTG+AGG + tig0005174:5600-5619 Msa1342110:intron 45.0%
! CATTTTCTCTGTTGGAGCTC+AGG + tig0005174:5701-5720 Msa1342110:intron 45.0%
!! ATAGAAGGAAAAGCGCCGAA+GGG - tig0005174:5756-5775 Msa1342110:intergenic 45.0%
!! AATAGAAGGAAAAGCGCCGA+AGG - tig0005174:5757-5776 Msa1342110:intergenic 45.0%
! GCCAACCAAAGAGTGTATTG+TGG - tig0005174:5781-5800 Msa1342110:intergenic 45.0%
CTGATCCGTAGAGCAAAAGA+AGG + tig0005174:5871-5890 Msa1342110:intron 45.0%
! TAGCCACAAGAGTGTAGATG+TGG + tig0005174:6072-6091 Msa1342110:intron 45.0%
! AGCCACAAGAGTGTAGATGT+GGG + tig0005174:6073-6092 Msa1342110:intron 45.0%
AAAGGGTAACCAACTCAGCT+TGG - tig0005174:6154-6173 Msa1342110:intergenic 45.0%
TCCTAAAGCGTGTGTTTGGA+TGG + tig0005174:6180-6199 Msa1342110:intron 45.0%
TCCATCCAAACACACGCTTT+AGG - tig0005174:6184-6203 Msa1342110:intergenic 45.0%
TAAAGCGTGTGTTTGGATGG+AGG + tig0005174:6183-6202 Msa1342110:intron 45.0%
!! TTGGATGGAGGATTTTGGAG+AGG + tig0005174:6195-6214 Msa1342110:intron 45.0%
TAGCAAAAAAAAACCGGGGG+GGG - tig0005174:6389-6408 Msa1342110:intergenic 45.0%
CTGAGGCAGCTATGAAATTG+AGG + tig0005174:6696-6715 Msa1342110:intron 45.0%
CCGTGCAATATTGCAGATGT+AGG + tig0005174:7143-7162 Msa1342110:intron 45.0%
CCTCCTCTAATGACATGTGA+TGG - tig0005174:7204-7223 Msa1342110:intergenic 45.0%
CCATCACATGTCATTAGAGG+AGG + tig0005174:7201-7220 Msa1342110:intron 45.0%
! TCGTTGTGCCTTCAGAGTTT+TGG + tig0005174:7406-7425 Msa1342110:intron 45.0%
CAACTTTACAAGCAGGACAG+TGG + tig0005174:7539-7558 Msa1342110:intron 45.0%
TCCTCGGCATTATTCGAGAA+AGG + tig0005174:7601-7620 Msa1342110:CDS 45.0%
TCCTTTCTCGAATAATGCCG+AGG - tig0005174:7605-7624 Msa1342110:intergenic 45.0%
CGTAGTTCAACAATGGGAAC+TGG - tig0005174:7641-7660 Msa1342110:intergenic 45.0%
TCCCATTGTTGAACTACGAC+GGG + tig0005174:7643-7662 Msa1342110:CDS 45.0%
AATTACCCACAAGCATGCAC+GGG - tig0005174:7833-7852 Msa1342110:intergenic 45.0%
TGGTGCAGTGAAATCCATGT+AGG + tig0005174:8133-8152 Msa1342110:CDS 45.0%
GACTTGAATGGATGTCCAAC+AGG - tig0005174:8160-8179 Msa1342110:intergenic 45.0%
TCCATTCATGAATGCCCTTG+CGG - tig0005174:8207-8226 Msa1342110:intergenic 45.0%
GCTTTCCAAGACGATCATAG+AGG - tig0005174:8276-8295 Msa1342110:intergenic 45.0%
AACAGAGATTCTCCATCCCT+CGG + tig0005174:8308-8327 Msa1342110:CDS 45.0%
! ACGGTTGTGTAGGGTTTTCT+GGG - tig0005174:8474-8493 Msa1342110:intergenic 45.0%
! AACGGTTGTGTAGGGTTTTC+TGG - tig0005174:8475-8494 Msa1342110:intergenic 45.0%
CAGCTATCAACGGTTGTGTA+GGG - tig0005174:8483-8502 Msa1342110:intergenic 45.0%
TCAGCTATCAACGGTTGTGT+AGG - tig0005174:8484-8503 Msa1342110:intergenic 45.0%
GGAAATAATCCACCTTGCTG+AGG + tig0005174:8543-8562 Msa1342110:CDS 45.0%
TGAGGAAACACTCCAAGCAT+GGG + tig0005174:8561-8580 Msa1342110:CDS 45.0%
TCCAAGCATGGGAACAAATG+AGG + tig0005174:8572-8591 Msa1342110:CDS 45.0%
TCCTCATTTGTTCCCATGCT+TGG - tig0005174:8576-8595 Msa1342110:intergenic 45.0%
TAATGAGGATGTACCACGTG+AGG + tig0005174:8611-8630 Msa1342110:CDS 45.0%
AATGAGGATGTACCACGTGA+GGG + tig0005174:8612-8631 Msa1342110:CDS 45.0%
TGGGGCCAACATGAATTTCA+GGG - tig0005174:8651-8670 Msa1342110:intergenic 45.0%
GGGCACAAAGCTCAAAATTG+TGG + tig0005174:8673-8692 Msa1342110:CDS 45.0%
CACAAACACCAACAACGCAA+TGG + tig0005174:8700-8719 Msa1342110:CDS 45.0%
GGAACATGCCACACAAATCT+CGG - tig0005174:8769-8788 Msa1342110:intergenic 45.0%
TTAAGCTCTCGTTCTAGTGG+TGG - tig0005174:8805-8824 Msa1342110:intergenic 45.0%
! TGTGGTGGAAATGTGCATTC+AGG + tig0005174:8849-8868 Msa1342110:CDS 45.0%
TCAACAATGCGCCTTGATGT+CGG + tig0005174:8901-8920 Msa1342110:CDS 45.0%
GACATGATTGCAAGGAAGCT+TGG - tig0005174:9175-9194 Msa1342110:intergenic 45.0%
GTTGACAGGACATGATTGCA+AGG - tig0005174:9183-9202 Msa1342110:intergenic 45.0%
!!! ACTGGTTTTGTTGTGTGGGG+AGG - tig0005174:4547-4566 None:intergenic 50.0%
CGTGTAGTTCCATATGCGTG+TGG + tig0005174:4598-4617 Msa1342110:five_prime_UTR 50.0%
! ATTGGCTTCCCACACGCATA+TGG - tig0005174:4610-4629 Msa1342110:intergenic 50.0%
ATATGCGTGTGGGAAGCCAA+TGG + tig0005174:4609-4628 Msa1342110:exon 50.0%
TGGGAAGCCAATGGCATCAA+CGG + tig0005174:4618-4637 Msa1342110:exon 50.0%
AGAGAGACCGTTGATGCCAT+TGG - tig0005174:4628-4647 Msa1342110:intergenic 50.0%
CACTCCAGATGTCTTAGTCC+TGG + tig0005174:5093-5112 Msa1342110:intron 50.0%
CTCCAGATGTCTTAGTCCTG+GGG + tig0005174:5095-5114 Msa1342110:intron 50.0%
TCCAGATGTCTTAGTCCTGG+GGG + tig0005174:5096-5115 Msa1342110:intron 50.0%
! GTGAGGGTGTGTTACCACAT+TGG + tig0005174:5118-5137 Msa1342110:intron 50.0%
! TTCTAAAGGGCACGGGGTTT+CGG + tig0005174:5294-5313 Msa1342110:intron 50.0%
CAGGTCGTATAGAGGAGAAG+AGG + tig0005174:5581-5600 Msa1342110:intron 50.0%
AGGTACTATGGGCAGAGAGT+GGG + tig0005174:5636-5655 Msa1342110:intron 50.0%
TCGTTATTGTTAGTCGCGGC+TGG + tig0005174:5671-5690 Msa1342110:intron 50.0%
CGTTATTGTTAGTCGCGGCT+GGG + tig0005174:5672-5691 Msa1342110:intron 50.0%
GTTATTGTTAGTCGCGGCTG+GGG + tig0005174:5673-5692 Msa1342110:intron 50.0%
CAGTAGGCCTATACACCCTT+CGG + tig0005174:5738-5757 Msa1342110:intron 50.0%
!! AAAAGCGCCGAAGGGTGTAT+AGG - tig0005174:5748-5767 Msa1342110:intergenic 50.0%
! GCCACAAGAGTGTAGATGTG+GGG + tig0005174:6074-6093 Msa1342110:intron 50.0%
ACCCCACATCTACACTCTTG+TGG - tig0005174:6078-6097 Msa1342110:intergenic 50.0%
!! AGGATTTTGGAGAGGTGCGT+AGG + tig0005174:6203-6222 Msa1342110:intron 50.0%
AGCAAAAAAAAACCGGGGGG+GGG - tig0005174:6388-6407 Msa1342110:intergenic 50.0%
GGGCAACACCAAAACTCTGA+AGG - tig0005174:7417-7436 Msa1342110:intergenic 50.0%
GCCCGTCGTAGTTCAACAAT+GGG - tig0005174:7647-7666 Msa1342110:intergenic 50.0%
TGCCCGTCGTAGTTCAACAA+TGG - tig0005174:7648-7667 Msa1342110:intergenic 50.0%
GCCAAGGAGAAAACCAATGC+CGG + tig0005174:7700-7719 Msa1342110:CDS 50.0%
AGCAATCCATTCTTTGGCGC+CGG - tig0005174:7722-7741 Msa1342110:intergenic 50.0%
TAGTACCCGTGCATGCTTGT+GGG + tig0005174:7825-7844 Msa1342110:CDS 50.0%
GAAATCCATGTAGGCCCTGT+TGG + tig0005174:8142-8161 Msa1342110:CDS 50.0%
TACACAGTCGAACATCCGCA+AGG + tig0005174:8189-8208 Msa1342110:CDS 50.0%
ACACAGTCGAACATCCGCAA+GGG + tig0005174:8190-8209 Msa1342110:CDS 50.0%
!! TCCGCAAGGGCATTCATGAA+TGG + tig0005174:8203-8222 Msa1342110:CDS 50.0%
GTTGAGCTCTGCATTCAAGC+TGG + tig0005174:8343-8362 Msa1342110:CDS 50.0%
!!! GGGTTTTCTGGGACTTCATC+TGG - tig0005174:8463-8482 Msa1342110:intergenic 50.0%
AGTTGCTCCAGTGAACAAGG+AGG + tig0005174:8522-8541 Msa1342110:CDS 50.0%
! CTTGGAGTGTTTCCTCAGCA+AGG - tig0005174:8558-8577 Msa1342110:intergenic 50.0%
CTGAGGAAACACTCCAAGCA+TGG + tig0005174:8560-8579 Msa1342110:CDS 50.0%
GCATGGGAACAAATGAGGAG+AGG + tig0005174:8577-8596 Msa1342110:CDS 50.0%
AATATCCACAGACCCTCACG+TGG - tig0005174:8627-8646 Msa1342110:intergenic 50.0%
CTGGGGCCAACATGAATTTC+AGG - tig0005174:8652-8671 Msa1342110:intergenic 50.0%
GAAATTCATGTTGGCCCCAG+CGG + tig0005174:8652-8671 Msa1342110:CDS 50.0%
AAATTCATGTTGGCCCCAGC+GGG + tig0005174:8653-8672 Msa1342110:CDS 50.0%
!! TTTTGAGCTTTGTGCCCGCT+GGG - tig0005174:8670-8689 Msa1342110:intergenic 50.0%
!! ATTTTGAGCTTTGTGCCCGC+TGG - tig0005174:8671-8690 Msa1342110:intergenic 50.0%
TGATACCGCCGAGATTTGTG+TGG + tig0005174:8758-8777 Msa1342110:CDS 50.0%
ACATGCCACACAAATCTCGG+CGG - tig0005174:8766-8785 Msa1342110:intergenic 50.0%
AGTGGTGGTCCGTTTACATC+AGG - tig0005174:8790-8809 Msa1342110:intergenic 50.0%
GAATTTCTACGGACAGGCTC+CGG + tig0005174:8825-8844 Msa1342110:CDS 50.0%
ATGCACATTTCCACCACAGC+CGG - tig0005174:8847-8866 Msa1342110:intergenic 50.0%
GTGGAAATGTGCATTCAGGC+TGG + tig0005174:8853-8872 Msa1342110:CDS 50.0%
CAACAATGCGCCTTGATGTC+GGG + tig0005174:8902-8921 Msa1342110:CDS 50.0%
TTGAAGGGATCCCGACATCA+AGG - tig0005174:8915-8934 Msa1342110:intergenic 50.0%
AAAGCCCCAGAGAATGTCAC+AGG - tig0005174:9393-9412 Msa1342110:intergenic 50.0%
GTTGTGTGGGGAGGAATGGA+TGG - tig0005174:4538-4557 None:intergenic 55.0%
GCTAGGGGACGACGCAATAA+AGG - tig0005174:4943-4962 Msa1342110:intergenic 55.0%
ACCCCCAGGACTAAGACATC+TGG - tig0005174:5100-5119 Msa1342110:intergenic 55.0%
ATGTCTTAGTCCTGGGGGTG+AGG + tig0005174:5101-5120 Msa1342110:intron 55.0%
TGTCTTAGTCCTGGGGGTGA+GGG + tig0005174:5102-5121 Msa1342110:intron 55.0%
GCTTTAGCAGTGCAAGCCCA+CGG + tig0005174:5507-5526 Msa1342110:intron 55.0%
ACATAGAGCCTCCACACCGT+GGG - tig0005174:5526-5545 Msa1342110:intergenic 55.0%
AACATAGAGCCTCCACACCG+TGG - tig0005174:5527-5546 Msa1342110:intergenic 55.0%
CGGTGTGGAGGCTCTATGTT+AGG + tig0005174:5527-5546 Msa1342110:intron 55.0%
! GAGGTACTATGGGCAGAGAG+TGG + tig0005174:5635-5654 Msa1342110:intron 55.0%
GGTACTATGGGCAGAGAGTG+GGG + tig0005174:5637-5656 Msa1342110:intron 55.0%
GGATCAGCTCTGTGGACAGT+AGG + tig0005174:5722-5741 Msa1342110:intron 55.0%
AAAAAAAAACCGGGGGGGGG+GGG - tig0005174:6385-6404 Msa1342110:intergenic 55.0%
CAAAAAAAAACCGGGGGGGG+GGG - tig0005174:6386-6405 Msa1342110:intergenic 55.0%
GCAAAAAAAAACCGGGGGGG+GGG - tig0005174:6387-6406 Msa1342110:intergenic 55.0%
TTGAACTACGACGGGCAGCT+AGG + tig0005174:7651-7670 Msa1342110:CDS 55.0%
TGAACTACGACGGGCAGCTA+GGG + tig0005174:7652-7671 Msa1342110:CDS 55.0%
!!! GCCGGCATTGGTTTTCTCCT+TGG - tig0005174:7704-7723 Msa1342110:intergenic 55.0%
GTAGTACCCGTGCATGCTTG+TGG + tig0005174:7824-7843 Msa1342110:CDS 55.0%
GATGTCCAACAGGGCCTACA+TGG - tig0005174:8150-8169 Msa1342110:intergenic 55.0%
CAACCACTGCTGGAATCCGA+GGG - tig0005174:8327-8346 Msa1342110:intergenic 55.0%
TCAACCACTGCTGGAATCCG+AGG - tig0005174:8328-8347 Msa1342110:intergenic 55.0%
ATGCAGAGCTCAACCACTGC+TGG - tig0005174:8337-8356 Msa1342110:intergenic 55.0%
! GGAGTGTTTCCTCAGCAAGG+TGG - tig0005174:8555-8574 Msa1342110:intergenic 55.0%
! GAGGCGCCAAGAGACTAATG+AGG + tig0005174:8596-8615 Msa1342110:CDS 55.0%
ATGTACCACGTGAGGGTCTG+TGG + tig0005174:8619-8638 Msa1342110:CDS 55.0%
! TTTGAGCTTTGTGCCCGCTG+GGG - tig0005174:8669-8688 Msa1342110:intergenic 55.0%
CATGCTGCCCATTGCGTTGT+TGG - tig0005174:8711-8730 Msa1342110:intergenic 55.0%
CAACAACGCAATGGGCAGCA+TGG + tig0005174:8709-8728 Msa1342110:CDS 55.0%
AACGCAATGGGCAGCATGGT+TGG + tig0005174:8713-8732 Msa1342110:CDS 55.0%
!! AGGCTAGGAGGGTACCTGTT+TGG + tig0005174:9212-9231 Msa1342110:three_prime_UTR 55.0%
! CATCTGGAGTGTGACCCGAG+TGG - tig0005174:5084-5103 Msa1342110:intergenic 60.0%
GGAGCTCAGGATCAGCTCTG+TGG + tig0005174:5714-5733 Msa1342110:intron 60.0%
! GGGGGTTGGATGGAGGGTTT+TGG - tig0005174:6357-6376 Msa1342110:intergenic 60.0%
AAAAAAAACCGGGGGGGGGG+GGG - tig0005174:6384-6403 Msa1342110:intergenic 60.0%
!! CCATTCTTTGGCGCCGGCAT+TGG - tig0005174:7716-7735 Msa1342110:intergenic 60.0%
CCAATGCCGGCGCCAAAGAA+TGG + tig0005174:7713-7732 Msa1342110:CDS 60.0%
CACTGCTGGAATCCGAGGGA+TGG - tig0005174:8323-8342 Msa1342110:intergenic 60.0%
CATCCCTCGGATTCCAGCAG+TGG + tig0005174:8321-8340 Msa1342110:CDS 60.0%
GGTAACACACCCTCACCCCC+AGG - tig0005174:5114-5133 Msa1342110:intergenic 65.0%
AGCAGTGCAAGCCCACGGTG+TGG + tig0005174:5512-5531 Msa1342110:intron 65.0%
AGTGCAAGCCCACGGTGTGG+AGG + tig0005174:5515-5534 Msa1342110:intron 65.0%
AAAAAAACCGGGGGGGGGGG+GGG - tig0005174:6383-6402 Msa1342110:intergenic 65.0%
TACGACGGGCAGCTAGGGAG+AGG + tig0005174:7657-7676 Msa1342110:CDS 65.0%
AAAAAACCGGGGGGGGGGGG+GGG - tig0005174:6382-6401 Msa1342110:intergenic 70.0%
CTACGGACAGGCTCCGGCTG+TGG + tig0005174:8831-8850 Msa1342110:CDS 70.0%
GGGGGGGGGGGTTGGATGGA+GGG - tig0005174:6363-6382 Msa1342110:intergenic 75.0%
AAAAACCGGGGGGGGGGGGG+GGG - tig0005174:6381-6400 Msa1342110:intergenic 75.0%
CGGACAGGCTCCGGCTGTGG+TGG + tig0005174:8834-8853 Msa1342110:CDS 75.0%
! GGGGGGGGGGGGTTGGATGG+AGG - tig0005174:6364-6383 Msa1342110:intergenic 80.0%
! AAAACCGGGGGGGGGGGGGG+GGG - tig0005174:6380-6399 Msa1342110:intergenic 80.0%
! GGGGGGGGGGGGGGGTTGGA+TGG - tig0005174:6367-6386 Msa1342110:intergenic 85.0%
! AAACCGGGGGGGGGGGGGGG+GGG - tig0005174:6379-6398 Msa1342110:intergenic 85.0%
! AACCGGGGGGGGGGGGGGGG+GGG - tig0005174:6378-6397 Msa1342110:intergenic 90.0%
! GGGGGGGGGGGGGGGGGGGT+TGG - tig0005174:6371-6390 Msa1342110:intergenic 95.0%
! ACCGGGGGGGGGGGGGGGGG+GGG - tig0005174:6377-6396 Msa1342110:intergenic 95.0%
Chromosome Type Strat End Strand Name
tig0005174 gene 4494 9418 4494 ID=Msa1342110;Name=Msa1342110
tig0005174 mRNA 4494 9418 4494 ID=Msa1342110-mRNA-1;Parent=Msa1342110;Name=Msa1342110-mRNA-1;_AED=0.04;_eAED=0.04;_QI=134|1|1|1|1|1|3|455|447
tig0005174 exon 4494 4846 4494 ID=Msa1342110-mRNA-1:exon:3460;Parent=Msa1342110-mRNA-1
tig0005174 exon 7554 7846 7554 ID=Msa1342110-mRNA-1:exon:3461;Parent=Msa1342110-mRNA-1
tig0005174 exon 8132 9418 8132 ID=Msa1342110-mRNA-1:exon:3462;Parent=Msa1342110-mRNA-1
tig0005174 five_prime_UTR 4494 4627 4494 ID=Msa1342110-mRNA-1:five_prime_utr;Parent=Msa1342110-mRNA-1
tig0005174 CDS 4628 4846 4628 ID=Msa1342110-mRNA-1:cds;Parent=Msa1342110-mRNA-1
tig0005174 CDS 7554 7846 7554 ID=Msa1342110-mRNA-1:cds;Parent=Msa1342110-mRNA-1
tig0005174 CDS 8132 8963 8132 ID=Msa1342110-mRNA-1:cds;Parent=Msa1342110-mRNA-1
tig0005174 three_prime_UTR 8964 9418 8964 ID=Msa1342110-mRNA-1:three_prime_utr;Parent=Msa1342110-mRNA-1
Gene Sequence

>Msa1342110

ATGGCATCAACGGTCTCTCTCTCAAACACAATCGGATTCTGTCACACCAAACACAACCACAATATTGGTAAACTTAACTACAATTCAAAAAATATAGTTCAAATCAACACATTTTCGCGTCGAAAAATTGGATACGGTCATAGATGTTTTCGGTTATATTGTCTTTCTGGAGGGAGAATGGAAAACAACGATAAAAGTGATTATGATGCAGCTTCCAAGGACAGTGGCAGTAAGAATAGAAATGAAGTGCCTCAAAATGCTGATTTTCCTCGGCATTATTCGAGAAAGGAGAAAAAGCCTTTTCCAGTTCCCATTGTTGAACTACGACGGGCAGCTAGGGAGAGGATAAAGAAGATGAAAGATGAGCCAAGGAGAAAACCAATGCCGGCGCCAAAGAATGGATTGCTAGTGAAGAACCTTATACCAGAAGCATATGATGTGTATAATGCTAGGATCACTTTGATTAATAATTTGAAAAAGCTGCTCAAAGTAGTACCCGTGCATGCTTGTGGGTGGTGCAGTGAAATCCATGTAGGCCCTGTTGGACATCCATTCAAGTCATGTAAAGGTACACAGTCGAACATCCGCAAGGGCATTCATGAATGGACAAATGCACATGTGGAAGACATATTAATACCGATTGACGCATTTCACCTCTATGATCGTCTTGGAAAGCGGATTACTCATGAACAGAGATTCTCCATCCCTCGGATTCCAGCAGTGGTTGAGCTCTGCATTCAAGCTGGCGTTAAAATTCGAGAGTTTCCCACAAAAAGGAGAAGAAAGCCAATAATCCGTATTGGGAAGAAGGAATTTGTGGATGCTGATGAAAGTGAACTACCAGATGAAGTCCCAGAAAACCCTACACAACCGTTGATAGCTGAAATACCGGATTCAGATATAGTTGCTCCAGTGAACAAGGAGGAAATAATCCACCTTGCTGAGGAAACACTCCAAGCATGGGAACAAATGAGGAGAGGCGCCAAGAGACTAATGAGGATGTACCACGTGAGGGTCTGTGGATATTGCCCTGAAATTCATGTTGGCCCCAGCGGGCACAAAGCTCAAAATTGTGGGGCACACAAACACCAACAACGCAATGGGCAGCATGGTTGGCAATCTGCAGTGCTTGATGACTTGATACCGCCGAGATTTGTGTGGCATGTTCCTGATGTAAACGGACCACCACTAGAACGAGAGCTTAAGAATTTCTACGGACAGGCTCCGGCTGTGGTGGAAATGTGCATTCAGGCTGGTGCTGCTTTACCAGAACAATATAAATCAACAATGCGCCTTGATGTCGGGATCCCTTCAACTCTTAAAGAAGCTGAAATGGTAGTTTGA

Protein sequence

>Msa1342110

MASTVSLSNTIGFCHTKHNHNIGKLNYNSKNIVQINTFSRRKIGYGHRCFRLYCLSGGRMENNDKSDYDAASKDSGSKNRNEVPQNADFPRHYSRKEKKPFPVPIVELRRAARERIKKMKDEPRRKPMPAPKNGLLVKNLIPEAYDVYNARITLINNLKKLLKVVPVHACGWCSEIHVGPVGHPFKSCKGTQSNIRKGIHEWTNAHVEDILIPIDAFHLYDRLGKRITHEQRFSIPRIPAVVELCIQAGVKIREFPTKRRRKPIIRIGKKEFVDADESELPDEVPENPTQPLIAEIPDSDIVAPVNKEEIIHLAEETLQAWEQMRRGAKRLMRMYHVRVCGYCPEIHVGPSGHKAQNCGAHKHQQRNGQHGWQSAVLDDLIPPRFVWHVPDVNGPPLERELKNFYGQAPAVVEMCIQAGAALPEQYKSTMRLDVGIPSTLKEAEMVV*