Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000931.t1 | XP_013446997.1 | 98 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 5.80E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000931.t1 | B0M3E8 | 91.7 | 350 | 29 | 0 | 1 | 350 | 1 | 350 | 2.5e-192 | 672.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000931.t1 | B7FK31 | 98.0 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 4.2e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000931 | MS.gene052130 | PPI |
| MS.gene22302 | MS.gene000931 | PPI |
| MS.gene61100 | MS.gene000931 | PPI |
| MS.gene21669 | MS.gene000931 | PPI |
| MS.gene55805 | MS.gene000931 | PPI |
| MS.gene069594 | MS.gene000931 | PPI |
| MS.gene22301 | MS.gene000931 | PPI |
| MS.gene048934 | MS.gene000931 | PPI |
| MS.gene000931 | MS.gene024691 | PPI |
| MS.gene000931 | MS.gene06078 | PPI |
| MS.gene000931 | MS.gene30948 | PPI |
| MS.gene45481 | MS.gene000931 | PPI |
| MS.gene000931 | MS.gene41197 | PPI |
| MS.gene21670 | MS.gene000931 | PPI |
| MS.gene021092 | MS.gene000931 | PPI |
| MS.gene024690 | MS.gene000931 | PPI |
| MS.gene000931 | MS.gene31166 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000931.t1 | MTR_8g096880 | 98.000 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 0.0 | 718 |
| MS.gene000931.t1 | MTR_8g096880 | 97.833 | 323 | 7 | 0 | 1 | 323 | 1 | 323 | 0.0 | 657 |
| MS.gene000931.t1 | MTR_4g134490 | 79.598 | 348 | 71 | 0 | 3 | 350 | 22 | 369 | 0.0 | 597 |
| MS.gene000931.t1 | MTR_8g096880 | 97.279 | 294 | 8 | 0 | 1 | 294 | 1 | 294 | 0.0 | 592 |
| MS.gene000931.t1 | MTR_4g134490 | 78.249 | 354 | 71 | 1 | 3 | 350 | 22 | 375 | 0.0 | 590 |
| MS.gene000931.t1 | MTR_5g009170 | 68.000 | 350 | 109 | 3 | 1 | 350 | 42 | 388 | 2.16e-176 | 495 |
| MS.gene000931.t1 | MTR_8g099535 | 67.930 | 343 | 108 | 2 | 4 | 346 | 2 | 342 | 1.20e-174 | 489 |
| MS.gene000931.t1 | MTR_5g009160 | 65.889 | 343 | 115 | 2 | 4 | 346 | 2 | 342 | 6.74e-169 | 474 |
| MS.gene000931.t1 | MTR_5g009160 | 69.145 | 269 | 82 | 1 | 78 | 346 | 12 | 279 | 3.68e-139 | 396 |
| MS.gene000931.t1 | MTR_5g009160 | 68.664 | 217 | 67 | 1 | 78 | 294 | 12 | 227 | 3.52e-107 | 313 |
| MS.gene000931.t1 | MTR_2g032100 | 40.571 | 350 | 184 | 8 | 8 | 346 | 73 | 409 | 9.65e-82 | 254 |
| MS.gene000931.t1 | MTR_8g089180 | 39.143 | 350 | 189 | 8 | 8 | 346 | 73 | 409 | 2.45e-78 | 246 |
| MS.gene000931.t1 | MTR_8g089180 | 39.143 | 350 | 189 | 8 | 8 | 346 | 73 | 409 | 2.45e-78 | 246 |
| MS.gene000931.t1 | MTR_2g032100 | 41.026 | 195 | 112 | 3 | 8 | 202 | 73 | 264 | 6.28e-45 | 156 |
| MS.gene000931.t1 | MTR_1g009600 | 27.350 | 351 | 214 | 13 | 6 | 345 | 5 | 325 | 2.59e-22 | 98.6 |
| MS.gene000931.t1 | MTR_4g024600 | 28.916 | 332 | 198 | 12 | 8 | 323 | 103 | 412 | 1.04e-21 | 95.9 |
| MS.gene000931.t1 | MTR_5g011940 | 28.280 | 343 | 216 | 11 | 8 | 338 | 92 | 416 | 2.21e-21 | 94.7 |
| MS.gene000931.t1 | MTR_2g073240 | 25.843 | 356 | 217 | 14 | 4 | 345 | 17 | 339 | 4.78e-21 | 94.7 |
| MS.gene000931.t1 | MTR_8g099285 | 74.545 | 55 | 13 | 1 | 238 | 292 | 3 | 56 | 1.61e-20 | 84.3 |
| MS.gene000931.t1 | MTR_4g102270 | 27.500 | 360 | 207 | 11 | 3 | 338 | 90 | 419 | 5.08e-20 | 90.9 |
| MS.gene000931.t1 | MTR_3g084090 | 28.080 | 349 | 209 | 14 | 8 | 338 | 101 | 425 | 1.58e-19 | 89.7 |
| MS.gene000931.t1 | MTR_0354s0040 | 26.912 | 353 | 214 | 13 | 8 | 341 | 84 | 411 | 1.23e-18 | 86.7 |
| MS.gene000931.t1 | MTR_0034s0060 | 24.719 | 356 | 221 | 14 | 4 | 345 | 135 | 457 | 3.74e-18 | 86.3 |
| MS.gene000931.t1 | MTR_4g129820 | 26.149 | 348 | 217 | 12 | 8 | 338 | 97 | 421 | 1.93e-17 | 83.2 |
| MS.gene000931.t1 | MTR_4g120030 | 26.126 | 333 | 194 | 15 | 6 | 330 | 111 | 399 | 2.34e-13 | 71.2 |
| MS.gene000931.t1 | MTR_4g063600 | 25.526 | 333 | 206 | 14 | 4 | 330 | 30 | 326 | 4.76e-13 | 69.7 |
| MS.gene000931.t1 | MTR_2g096660 | 24.924 | 329 | 205 | 13 | 3 | 325 | 35 | 327 | 8.59e-13 | 68.9 |
| MS.gene000931.t1 | MTR_1g088480 | 25.231 | 325 | 195 | 14 | 7 | 325 | 119 | 401 | 7.85e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000931.t1 | AT1G12780 | 86.167 | 347 | 48 | 0 | 3 | 349 | 4 | 350 | 0.0 | 635 |
| MS.gene000931.t1 | AT1G63180 | 83.621 | 348 | 57 | 0 | 3 | 350 | 4 | 351 | 0.0 | 622 |
| MS.gene000931.t1 | AT1G63180 | 84.138 | 290 | 46 | 0 | 3 | 292 | 4 | 293 | 0.0 | 517 |
| MS.gene000931.t1 | AT4G10960 | 67.836 | 342 | 108 | 2 | 5 | 346 | 3 | 342 | 9.44e-177 | 494 |
| MS.gene000931.t1 | AT1G64440 | 67.347 | 343 | 110 | 2 | 8 | 350 | 5 | 345 | 6.76e-175 | 489 |
| MS.gene000931.t1 | AT4G23920 | 66.962 | 339 | 110 | 2 | 5 | 343 | 2 | 338 | 3.87e-171 | 480 |
| MS.gene000931.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene000931.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene000931.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene000931.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 97 | 434 | 9.65e-79 | 248 |
| MS.gene000931.t1 | AT4G20460 | 38.746 | 351 | 191 | 8 | 8 | 347 | 72 | 409 | 4.02e-78 | 245 |
| MS.gene000931.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 72 | 408 | 4.87e-76 | 240 |
| MS.gene000931.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene000931.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene000931.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene000931.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene000931.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene000931.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene000931.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene000931.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene000931.t1 | AT1G30620 | 38.462 | 195 | 117 | 3 | 8 | 202 | 73 | 264 | 1.89e-41 | 147 |
| MS.gene000931.t1 | AT4G00110 | 27.168 | 346 | 216 | 12 | 8 | 338 | 93 | 417 | 2.46e-21 | 94.7 |
| MS.gene000931.t1 | AT3G23820 | 28.035 | 346 | 213 | 11 | 8 | 338 | 114 | 438 | 4.47e-21 | 94.4 |
| MS.gene000931.t1 | AT2G45310 | 27.586 | 348 | 212 | 13 | 8 | 338 | 99 | 423 | 4.52e-21 | 94.0 |
| MS.gene000931.t1 | AT1G02000 | 27.378 | 347 | 214 | 13 | 8 | 338 | 94 | 418 | 1.06e-20 | 93.2 |
| MS.gene000931.t1 | AT1G53500 | 26.271 | 354 | 214 | 14 | 6 | 345 | 9 | 329 | 2.48e-20 | 92.8 |
| MS.gene000931.t1 | AT4G12250 | 28.613 | 346 | 211 | 13 | 8 | 338 | 98 | 422 | 5.91e-19 | 87.8 |
| MS.gene000931.t1 | AT1G78570 | 25.352 | 355 | 220 | 13 | 4 | 345 | 5 | 327 | 1.99e-18 | 87.0 |
| MS.gene000931.t1 | AT4G30440 | 26.446 | 363 | 218 | 14 | 8 | 349 | 90 | 424 | 4.29e-17 | 82.4 |
| MS.gene000931.t1 | AT2G47650 | 25.680 | 331 | 201 | 14 | 7 | 330 | 122 | 414 | 2.40e-15 | 77.0 |
| MS.gene000931.t1 | AT3G53520 | 25.788 | 349 | 212 | 14 | 7 | 345 | 121 | 432 | 2.82e-15 | 77.0 |
| MS.gene000931.t1 | AT3G62830 | 25.680 | 331 | 201 | 14 | 7 | 330 | 120 | 412 | 2.96e-15 | 77.0 |
| MS.gene000931.t1 | AT3G62830 | 25.680 | 331 | 201 | 14 | 7 | 330 | 120 | 412 | 2.96e-15 | 77.0 |
| MS.gene000931.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene000931.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene000931.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene000931.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 60 | 356 | 1.50e-13 | 71.6 |
| MS.gene000931.t1 | AT3G53520 | 25.788 | 349 | 210 | 15 | 7 | 345 | 121 | 430 | 2.05e-13 | 71.2 |
| MS.gene000931.t1 | AT2G47650 | 25.223 | 337 | 201 | 15 | 7 | 330 | 122 | 420 | 3.13e-13 | 70.9 |
| MS.gene000931.t1 | AT3G46440 | 24.324 | 333 | 210 | 14 | 4 | 330 | 27 | 323 | 1.10e-12 | 68.6 |
| MS.gene000931.t1 | AT3G46440 | 24.324 | 333 | 210 | 14 | 4 | 330 | 27 | 323 | 1.10e-12 | 68.6 |
| MS.gene000931.t1 | AT3G53520 | 26.124 | 356 | 191 | 18 | 7 | 330 | 121 | 436 | 1.47e-12 | 68.9 |
Find 102 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATCTGCTACTGTTTA+TGG | 0.137115 | 4.3:+6666943 | MS.gene000931:CDS |
| ATATAAGGCATGAGATTATT+TGG | 0.206042 | 4.3:-6667369 | None:intergenic |
| CACCGGTGACCAGGATCTTT+TGG | 0.235861 | 4.3:-6665797 | None:intergenic |
| GGCCAAATATAATTGTAAAA+AGG | 0.261914 | 4.3:+6666236 | MS.gene000931:CDS |
| CATCTCCTCTACACCATATT+TGG | 0.270436 | 4.3:-6668646 | None:intergenic |
| TCTCAGAATTAAAGATGATT+TGG | 0.312137 | 4.3:+6665983 | MS.gene000931:CDS |
| ATTATCGAAATTATCAATAA+TGG | 0.318002 | 4.3:-6665880 | None:intergenic |
| TCAGAATCTCGATTTCACTA+TGG | 0.322494 | 4.3:+6665956 | MS.gene000931:CDS |
| TCTGCATTTGAGAAAGCTTC+TGG | 0.322524 | 4.3:+6668180 | MS.gene000931:CDS |
| CACCGAGTTTACCACTTTCA+TGG | 0.335121 | 4.3:-6667329 | None:intergenic |
| ACAGCTACTTGCTGTATATA+AGG | 0.342436 | 4.3:-6667384 | None:intergenic |
| TATAAGGCATGAGATTATTT+GGG | 0.365430 | 4.3:-6667368 | None:intergenic |
| TAATTTCGATAATTCTGTTA+TGG | 0.375036 | 4.3:+6665890 | MS.gene000931:CDS |
| TATCTCTTGCAATTTCTTCA+AGG | 0.375499 | 4.3:-6667245 | None:intergenic |
| GGTCCGGCCATAGGGATTCA+TGG | 0.376978 | 4.3:-6667010 | None:intergenic |
| CCACTTTCATGGGCTCCAAC+TGG | 0.384370 | 4.3:-6667318 | None:intergenic |
| TGTGCAGGGATCAGTGGAAC+TGG | 0.404339 | 4.3:+6668667 | MS.gene000931:CDS |
| TTACCTGAGCTCAATGTATA+TGG | 0.409586 | 4.3:+6667414 | MS.gene000931:CDS |
| ACTGCTTACAACTTGGGAAC+TGG | 0.414239 | 4.3:+6668129 | MS.gene000931:CDS |
| ACGGTGCTTCAGCTTCTTCA+AGG | 0.422997 | 4.3:+6665843 | MS.gene000931:CDS |
| TATCAATCTCTATGAAGTTA+TGG | 0.427157 | 4.3:+6666215 | MS.gene000931:CDS |
| AGTAAAATGATCTTCCATTC+TGG | 0.431084 | 4.3:-6667282 | None:intergenic |
| CTTCTTGGACACAACTTCAA+TGG | 0.436103 | 4.3:-6668338 | None:intergenic |
| ACCGGTGGTGCTGGTTTCAT+CGG | 0.443173 | 4.3:+6665813 | MS.gene000931:CDS |
| ATCCTGGTCACCGGTGGTGC+TGG | 0.444164 | 4.3:+6665804 | MS.gene000931:CDS |
| GAACAACCCATGGGGTTACT+CGG | 0.453711 | 4.3:+6668695 | MS.gene000931:CDS |
| AGTTACCTTGGTCCGGCCAT+AGG | 0.453772 | 4.3:-6667019 | None:intergenic |
| CAGAATCTCGATTTCACTAT+GGG | 0.461544 | 4.3:+6665957 | MS.gene000931:CDS |
| GAGATTATTTGGGATGCCCC+TGG | 0.467920 | 4.3:-6667358 | None:intergenic |
| TACAACTTGGGAACTGGCCG+TGG | 0.472074 | 4.3:+6668135 | MS.gene000931:CDS |
| ACCGAGTTTACCACTTTCAT+GGG | 0.472646 | 4.3:-6667328 | None:intergenic |
| CTGAGATACTTCAATCCAGT+TGG | 0.475700 | 4.3:+6667303 | MS.gene000931:CDS |
| AAGCTCAGAAAGAACTTGGC+TGG | 0.476588 | 4.3:+6668399 | MS.gene000931:CDS |
| TCCACACAGGGTATTGTGTC+AGG | 0.481381 | 4.3:-6666970 | None:intergenic |
| AACAACCCATGGGGTTACTC+GGG | 0.481728 | 4.3:+6668696 | MS.gene000931:CDS |
| TGGTACATCTGTGCTTGAAA+TGG | 0.482706 | 4.3:+6668155 | MS.gene000931:CDS |
| ATGGTGTAGAGGAGATGTGC+AGG | 0.488200 | 4.3:+6668652 | MS.gene000931:CDS |
| GTAAACTCGGTGAAGATCCC+AGG | 0.496299 | 4.3:+6667340 | MS.gene000931:CDS |
| TTCAGATAGCTGAGCCAGAA+TGG | 0.502812 | 4.3:+6667268 | MS.gene000931:CDS |
| GGGTGATAGTTACCTTGGTC+CGG | 0.503389 | 4.3:-6667026 | None:intergenic |
| AGGTTGTACTGCTTACAACT+TGG | 0.505052 | 4.3:+6668122 | MS.gene000931:intron |
| GACCGTGTTCGTGAACTTGT+TGG | 0.506832 | 4.3:+6665921 | MS.gene000931:CDS |
| GTTACCTTGGTCCGGCCATA+GGG | 0.507256 | 4.3:-6667018 | None:intergenic |
| AACCAGCACCACCGGTGACC+AGG | 0.507265 | 4.3:-6665806 | None:intergenic |
| TTCATCTTCCCAAAAGATCC+TGG | 0.508087 | 4.3:+6665788 | MS.gene000931:CDS |
| AAGTTGTGTCCAAGAAGGCC+GGG | 0.512692 | 4.3:+6668344 | MS.gene000931:CDS |
| TATATACAGCAAGTAGCTGT+TGG | 0.514025 | 4.3:+6667387 | MS.gene000931:CDS |
| GCCGATGAAACCAGCACCAC+CGG | 0.515032 | 4.3:-6665814 | None:intergenic |
| GGTTGTACTGCTTACAACTT+GGG | 0.516507 | 4.3:+6668123 | MS.gene000931:intron |
| GAAGTTGTGTCCAAGAAGGC+CGG | 0.517669 | 4.3:+6668343 | MS.gene000931:CDS |
| AGATTATTTGGGATGCCCCT+GGG | 0.522440 | 4.3:-6667357 | None:intergenic |
| CATTGAAGTTGTGTCCAAGA+AGG | 0.530821 | 4.3:+6668339 | MS.gene000931:CDS |
| GATAAAGCTCAGAAAGAACT+TGG | 0.533116 | 4.3:+6668395 | MS.gene000931:CDS |
| ATTGTTATCAAAATAGCGAC+GGG | 0.541549 | 4.3:-6666181 | None:intergenic |
| TCCCAAAAGATCCTGGTCAC+CGG | 0.541923 | 4.3:+6665795 | MS.gene000931:CDS |
| ATTTGCAACACTTTCACCAA+CGG | 0.543081 | 4.3:-6666157 | None:intergenic |
| TTTGCTGGATTAAAAGCCGT+TGG | 0.547808 | 4.3:+6666141 | MS.gene000931:CDS |
| TGACCATATACATTGAGCTC+AGG | 0.550727 | 4.3:-6667417 | None:intergenic |
| GGCTTCCCCGAGTAACCCCA+TGG | 0.558191 | 4.3:-6668702 | None:intergenic |
| AGGAGATGTGCAGGGATCAG+TGG | 0.560724 | 4.3:+6668661 | MS.gene000931:CDS |
| ATGGTCATGATTATCCTACC+AGG | 0.562194 | 4.3:+6667433 | MS.gene000931:CDS |
| TGGTTTCATCGGCACTCACA+CGG | 0.567720 | 4.3:+6665824 | MS.gene000931:CDS |
| AAGCCATGAATCCCTATGGC+CGG | 0.576086 | 4.3:+6667007 | MS.gene000931:CDS |
| TTACAAGCCATGAATCCCTA+TGG | 0.577950 | 4.3:+6667003 | MS.gene000931:CDS |
| CCAGTTGGAGCCCATGAAAG+TGG | 0.581440 | 4.3:+6667318 | MS.gene000931:CDS |
| CATGATTATCCTACCAGGGA+TGG | 0.584552 | 4.3:+6667438 | MS.gene000931:CDS |
| CGTTGCGAAAAGCTTTCTCA+CGG | 0.596627 | 4.3:-6667898 | None:intergenic |
| TCGGGACTATATCCATGTGA+TGG | 0.600840 | 4.3:+6667851 | MS.gene000931:CDS |
| AGTTGTGTCCAAGAAGGCCG+GGG | 0.600896 | 4.3:+6668345 | MS.gene000931:CDS |
| TAATTCTGTTATGGAAGCTG+TGG | 0.603301 | 4.3:+6665899 | MS.gene000931:CDS |
| GCCCATGAAAGTGGTAAACT+CGG | 0.607833 | 4.3:+6667327 | MS.gene000931:CDS |
| CAGGGCCAAATATGGTGTAG+AGG | 0.615440 | 4.3:+6668641 | MS.gene000931:intron |
| TCGAGATTCTGAGAAAGTTG+AGG | 0.615843 | 4.3:-6665945 | None:intergenic |
| GATTGTTATCAAAATAGCGA+CGG | 0.616877 | 4.3:-6666182 | None:intergenic |
| TAAACCTCAGTAGCATCCCC+CGG | 0.617677 | 4.3:-6668362 | None:intergenic |
| GTGCAGGGATCAGTGGAACT+GGG | 0.619387 | 4.3:+6668668 | MS.gene000931:CDS |
| ACATACCGCAGAGCCATCCC+TGG | 0.622415 | 4.3:-6667451 | None:intergenic |
| GTGCTTCAGCTTCTTCAAGG+TGG | 0.623980 | 4.3:+6665846 | MS.gene000931:CDS |
| ACTGGGCTAAGAACAACCCA+TGG | 0.628147 | 4.3:+6668685 | MS.gene000931:CDS |
| TAAACTCGGTGAAGATCCCA+GGG | 0.631953 | 4.3:+6667341 | MS.gene000931:CDS |
| CAAAAGATCCTGGTCACCGG+TGG | 0.634217 | 4.3:+6665798 | MS.gene000931:CDS |
| CATGTGATGGACTTAGCAGA+TGG | 0.636104 | 4.3:+6667864 | MS.gene000931:CDS |
| ACCTGACACAATACCCTGTG+TGG | 0.637616 | 4.3:+6666969 | MS.gene000931:CDS |
| CTGGGCTAAGAACAACCCAT+GGG | 0.638108 | 4.3:+6668686 | MS.gene000931:CDS |
| ATTTGAGAAAGCTTCTGGCA+AGG | 0.639603 | 4.3:+6668185 | MS.gene000931:CDS |
| TAACTTGAAATCCTCCACAC+AGG | 0.643478 | 4.3:-6666983 | None:intergenic |
| GAATCCCTATGGCCGGACCA+AGG | 0.648006 | 4.3:+6667014 | MS.gene000931:CDS |
| TGGTCATGATTATCCTACCA+GGG | 0.649761 | 4.3:+6667434 | MS.gene000931:CDS |
| AACTTGAAATCCTCCACACA+GGG | 0.650612 | 4.3:-6666982 | None:intergenic |
| TCCTACCAGGGATGGCTCTG+CGG | 0.652641 | 4.3:+6667446 | MS.gene000931:CDS |
| GACCAACAAGTTCACGAACA+CGG | 0.652988 | 4.3:-6665923 | None:intergenic |
| CATCTGCTAAGTCCATCACA+TGG | 0.655053 | 4.3:-6667863 | None:intergenic |
| TGGTGTAGAGGAGATGTGCA+GGG | 0.663717 | 4.3:+6668653 | MS.gene000931:CDS |
| TGACACAATACCCTGTGTGG+AGG | 0.670305 | 4.3:+6666972 | MS.gene000931:CDS |
| ACAACCCATGGGGTTACTCG+GGG | 0.677702 | 4.3:+6668697 | MS.gene000931:CDS |
| GCTTCCCCGAGTAACCCCAT+GGG | 0.688095 | 4.3:-6668701 | None:intergenic |
| ACCGCAGAGCCATCCCTGGT+AGG | 0.697786 | 4.3:-6667447 | None:intergenic |
| GTTGTGTCCAAGAAGGCCGG+GGG | 0.716927 | 4.3:+6668346 | MS.gene000931:CDS |
| TTTCAAGCACAGATGTACCA+CGG | 0.723008 | 4.3:-6668152 | None:intergenic |
| TTGTTATCAAAATAGCGACG+GGG | 0.756243 | 4.3:-6666180 | None:intergenic |
| TGGGCTAAGAACAACCCATG+GGG | 0.757527 | 4.3:+6668687 | MS.gene000931:CDS |
| AAACTCGGTGAAGATCCCAG+GGG | 0.837560 | 4.3:+6667342 | MS.gene000931:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTGGTTATAAAATTAA+AGG | + | chr4.3:6667573-6667592 | MS.gene000931:intron | 10.0% |
| !!! | AATTTAAGATTTATATTTCA+CGG | - | chr4.3:6667624-6667643 | None:intergenic | 10.0% |
| !!! | ATTTAACTTTATTTGATTTT+TGG | + | chr4.3:6666534-6666553 | MS.gene000931:intron | 10.0% |
| !!! | TTTAACTTTATTTGATTTTT+GGG | + | chr4.3:6666535-6666554 | MS.gene000931:intron | 10.0% |
| !! | ATTATCGAAATTATCAATAA+TGG | - | chr4.3:6665883-6665902 | None:intergenic | 15.0% |
| !! | TTCTTAAATAAAATAAGGTT+CGG | + | chr4.3:6667832-6667851 | MS.gene000931:intron | 15.0% |
| !! | TTGTTTAGTTATTAATATTC+TGG | + | chr4.3:6668608-6668627 | MS.gene000931:intron | 15.0% |
| !!! | AACCTTTTTACAATTATATT+TGG | - | chr4.3:6666241-6666260 | None:intergenic | 15.0% |
| !!! | CTGTTTTCTTAAATAAAATA+AGG | + | chr4.3:6667827-6667846 | MS.gene000931:intron | 15.0% |
| !! | AAGATATTATAAGCATAAAC+AGG | - | chr4.3:6666680-6666699 | None:intergenic | 20.0% |
| !! | AAGTTAATTTCTTAATCATC+TGG | + | chr4.3:6668466-6668485 | MS.gene000931:intron | 20.0% |
| !! | AATAACTAAACAAGAATTAC+AGG | - | chr4.3:6668601-6668620 | None:intergenic | 20.0% |
| !! | AGATATTATAAGCATAAACA+GGG | - | chr4.3:6666679-6666698 | None:intergenic | 20.0% |
| !! | ATAACTAAACAAGAATTACA+GGG | - | chr4.3:6668600-6668619 | None:intergenic | 20.0% |
| !! | ATTAATTAGAACTCAAAAAC+AGG | - | chr4.3:6667185-6667204 | None:intergenic | 20.0% |
| !! | ATTTATGGCATTTCAAATAT+TGG | + | chr4.3:6667558-6667577 | MS.gene000931:intron | 20.0% |
| !! | GAATAAAGAGAAATCTTAAT+TGG | - | chr4.3:6668285-6668304 | None:intergenic | 20.0% |
| !! | GTTAAAATAGCTTATGAAAA+TGG | + | chr4.3:6666497-6666516 | MS.gene000931:intron | 20.0% |
| !! | TAAAAATTCATACTTAGAGA+AGG | + | chr4.3:6667532-6667551 | MS.gene000931:intron | 20.0% |
| !! | TAAAGTCAAAAGTGATAAAT+TGG | + | chr4.3:6668094-6668113 | MS.gene000931:intron | 20.0% |
| !! | TAAGATTTCTCTTTATTCAT+TGG | + | chr4.3:6668287-6668306 | MS.gene000931:intron | 20.0% |
| !! | TAATTTCGATAATTCTGTTA+TGG | + | chr4.3:6665890-6665909 | MS.gene000931:CDS | 20.0% |
| !! | TACTAAAAGTAATCAAAAAC+AGG | - | chr4.3:6667122-6667141 | None:intergenic | 20.0% |
| !! | TCTTAAATAAAATAAGGTTC+GGG | + | chr4.3:6667833-6667852 | MS.gene000931:intron | 20.0% |
| !! | TTATTTAAGAAAACAGAAAG+AGG | - | chr4.3:6667823-6667842 | None:intergenic | 20.0% |
| !!! | CTACTTTTCATTATATGATT+TGG | + | chr4.3:6666299-6666318 | MS.gene000931:intron | 20.0% |
| !!! | GATTTTTGATTATATTTGCA+TGG | + | chr4.3:6666808-6666827 | MS.gene000931:intron | 20.0% |
| !!! | TATTTTGATAACAATCTTGT+TGG | + | chr4.3:6666189-6666208 | MS.gene000931:CDS | 20.0% |
| ! | AAAAAAAAATAGCGCAACTT+GGG | - | chr4.3:6666652-6666671 | None:intergenic | 25.0% |
| ! | ACTTAGAGAAGGAAAATTTA+TGG | + | chr4.3:6667543-6667562 | MS.gene000931:intron | 25.0% |
| ! | ATATAAGGCATGAGATTATT+TGG | - | chr4.3:6667372-6667391 | None:intergenic | 25.0% |
| ! | CTTAAACAAAACCACTTATA+TGG | + | chr4.3:6666568-6666587 | MS.gene000931:intron | 25.0% |
| ! | GATATTATAAGCATAAACAG+GGG | - | chr4.3:6666678-6666697 | None:intergenic | 25.0% |
| ! | GGCCAAATATAATTGTAAAA+AGG | + | chr4.3:6666236-6666255 | MS.gene000931:CDS | 25.0% |
| ! | TAAAAAAAAATAGCGCAACT+TGG | - | chr4.3:6666653-6666672 | None:intergenic | 25.0% |
| ! | TATAAGGCATGAGATTATTT+GGG | - | chr4.3:6667371-6667390 | None:intergenic | 25.0% |
| ! | TATCAATCTCTATGAAGTTA+TGG | + | chr4.3:6666215-6666234 | MS.gene000931:CDS | 25.0% |
| ! | TCTCAGAATTAAAGATGATT+TGG | + | chr4.3:6665983-6666002 | MS.gene000931:CDS | 25.0% |
| ! | TGACAGTATGACAAATTATT+GGG | + | chr4.3:6667738-6667757 | MS.gene000931:intron | 25.0% |
| ! | TTAAGCTGTTTATCCATATA+TGG | + | chr4.3:6666604-6666623 | MS.gene000931:intron | 25.0% |
| ! | TTGTCAGTATCAATAAGTAA+GGG | - | chr4.3:6667953-6667972 | None:intergenic | 25.0% |
| ! | TTGTGATACTATAGAATGTT+TGG | + | chr4.3:6666754-6666773 | MS.gene000931:intron | 25.0% |
| ! | TTTATAGTACGTAACAATCA+TGG | + | chr4.3:6668441-6668460 | MS.gene000931:intron | 25.0% |
| ! | TTTGTCAGTATCAATAAGTA+AGG | - | chr4.3:6667954-6667973 | None:intergenic | 25.0% |
| !!! | AAAGTGATAAATTGGTTTTC+AGG | + | chr4.3:6668102-6668121 | MS.gene000931:intron | 25.0% |
| !!! | ACTGTCACAATTTTAAGAAA+TGG | - | chr4.3:6667725-6667744 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTAGATTCGACG+CGG | + | chr4.3:6666110-6666129 | MS.gene000931:intron | 25.0% |
| !!! | TTTCTTGTTTTTGCCATATA+TGG | - | chr4.3:6666620-6666639 | None:intergenic | 25.0% |
| AAATGCACTTACCATATAAG+TGG | - | chr4.3:6666582-6666601 | None:intergenic | 30.0% | |
| ACGATAATTACAAAGCATGA+CGG | - | chr4.3:6666788-6666807 | None:intergenic | 30.0% | |
| AGTAAAATGATCTTCCATTC+TGG | - | chr4.3:6667285-6667304 | None:intergenic | 30.0% | |
| ATTGTTATCAAAATAGCGAC+GGG | - | chr4.3:6666184-6666203 | None:intergenic | 30.0% | |
| CAGTAAGATTATTACGTTAG+AGG | + | chr4.3:6667985-6668004 | MS.gene000931:intron | 30.0% | |
| GACTCTCAAAACAAAAAGAT+TGG | + | chr4.3:6668523-6668542 | MS.gene000931:intron | 30.0% | |
| GATAAAGCAAATAACAGCTT+AGG | + | chr4.3:6667762-6667781 | MS.gene000931:intron | 30.0% | |
| GATTGTTATCAAAATAGCGA+CGG | - | chr4.3:6666185-6666204 | None:intergenic | 30.0% | |
| GTGACAGTATGACAAATTAT+TGG | + | chr4.3:6667737-6667756 | MS.gene000931:intron | 30.0% | |
| TATCTCTTGCAATTTCTTCA+AGG | - | chr4.3:6667248-6667267 | None:intergenic | 30.0% | |
| TGTCAGTATCAATAAGTAAG+GGG | - | chr4.3:6667952-6667971 | None:intergenic | 30.0% | |
| ! | CTTCAATGGAATTTTCTGAA+AGG | - | chr4.3:6668327-6668346 | None:intergenic | 30.0% |
| ! | TAGATTGTTTTCCCATTTGA+TGG | + | chr4.3:6667061-6667080 | MS.gene000931:intron | 30.0% |
| ! | TATTTGCATGGAAGTTGATT+TGG | + | chr4.3:6666820-6666839 | MS.gene000931:intron | 30.0% |
| !! | ATCAAGTATTTTTGCATCTG+TGG | + | chr4.3:6668045-6668064 | MS.gene000931:intron | 30.0% |
| !! | TTTTGAGAGTCTTGATCTTT+TGG | - | chr4.3:6668514-6668533 | None:intergenic | 30.0% |
| ATAATTACAAAGCATGACGG+CGG | - | chr4.3:6666785-6666804 | None:intergenic | 35.0% | |
| ATTTGCAACACTTTCACCAA+CGG | - | chr4.3:6666160-6666179 | None:intergenic | 35.0% | |
| CAGAATCTCGATTTCACTAT+GGG | + | chr4.3:6665957-6665976 | MS.gene000931:CDS | 35.0% | |
| CTTTATCATACAGAGATGCA+AGG | - | chr4.3:6668079-6668098 | None:intergenic | 35.0% | |
| GATAAAGCTCAGAAAGAACT+TGG | + | chr4.3:6668395-6668414 | MS.gene000931:CDS | 35.0% | |
| TAATTCTGTTATGGAAGCTG+TGG | + | chr4.3:6665899-6665918 | MS.gene000931:CDS | 35.0% | |
| TATATACAGCAAGTAGCTGT+TGG | + | chr4.3:6667387-6667406 | MS.gene000931:CDS | 35.0% | |
| TCAGAATCTCGATTTCACTA+TGG | + | chr4.3:6665956-6665975 | MS.gene000931:CDS | 35.0% | |
| TCATCATCTGCTACTGTTTA+TGG | + | chr4.3:6666943-6666962 | MS.gene000931:CDS | 35.0% | |
| TGGAATTGAAACAAGATTGC+AGG | + | chr4.3:6668015-6668034 | MS.gene000931:intron | 35.0% | |
| TTACCTGAGCTCAATGTATA+TGG | + | chr4.3:6667414-6667433 | MS.gene000931:CDS | 35.0% | |
| TTAGAACTCAAAAACAGGCA+TGG | - | chr4.3:6667180-6667199 | None:intergenic | 35.0% | |
| TTGTTATCAAAATAGCGACG+GGG | - | chr4.3:6666183-6666202 | None:intergenic | 35.0% | |
| ! | AACAATCTAGAACAAACCGA+TGG | - | chr4.3:6667050-6667069 | None:intergenic | 35.0% |
| ! | ACAATCTAGAACAAACCGAT+GGG | - | chr4.3:6667049-6667068 | None:intergenic | 35.0% |
| ! | ATATTCTGGACCTTTTCTTC+AGG | + | chr4.3:6668622-6668641 | MS.gene000931:intron | 35.0% |
| ! | TATTCTGGACCTTTTCTTCA+GGG | + | chr4.3:6668623-6668642 | MS.gene000931:intron | 35.0% |
| ! | TCTTTTGGTCAACAAAAGCT+TGG | - | chr4.3:6668499-6668518 | None:intergenic | 35.0% |
| !! | ACAGCTACTTGCTGTATATA+AGG | - | chr4.3:6667387-6667406 | None:intergenic | 35.0% |
| !!! | ATTGTTTTGACCGAGCTTAT+GGG | + | chr4.3:6666430-6666449 | MS.gene000931:intron | 35.0% |
| AACTTGAAATCCTCCACACA+GGG | - | chr4.3:6666985-6667004 | None:intergenic | 40.0% | |
| ACAAGCTCGAAACCATCAAA+TGG | - | chr4.3:6667076-6667095 | None:intergenic | 40.0% | |
| ACCGAGTTTACCACTTTCAT+GGG | - | chr4.3:6667331-6667350 | None:intergenic | 40.0% | |
| ACTAGTATACTCTGCAGTGA+AGG | + | chr4.3:6667692-6667711 | MS.gene000931:intron | 40.0% | |
| AGGTTGTACTGCTTACAACT+TGG | + | chr4.3:6668122-6668141 | MS.gene000931:intron | 40.0% | |
| AGTCTCAAAATCTCAGCAGT+TGG | - | chr4.3:6666878-6666897 | None:intergenic | 40.0% | |
| ATCTACTGTTCCCATAAGCT+CGG | - | chr4.3:6666443-6666462 | None:intergenic | 40.0% | |
| ATGGTCATGATTATCCTACC+AGG | + | chr4.3:6667433-6667452 | MS.gene000931:CDS | 40.0% | |
| ATTTGAGAAAGCTTCTGGCA+AGG | + | chr4.3:6668185-6668204 | MS.gene000931:CDS | 40.0% | |
| CAAGCTCGAAACCATCAAAT+GGG | - | chr4.3:6667075-6667094 | None:intergenic | 40.0% | |
| CATATTTGGCCCTGAAGAAA+AGG | - | chr4.3:6668635-6668654 | None:intergenic | 40.0% | |
| CATCTCCTCTACACCATATT+TGG | - | chr4.3:6668649-6668668 | None:intergenic | 40.0% | |
| CATTGAAGTTGTGTCCAAGA+AGG | + | chr4.3:6668339-6668358 | MS.gene000931:CDS | 40.0% | |
| CTGAGATACTTCAATCCAGT+TGG | + | chr4.3:6667303-6667322 | MS.gene000931:CDS | 40.0% | |
| CTTCTTGGACACAACTTCAA+TGG | - | chr4.3:6668341-6668360 | None:intergenic | 40.0% | |
| GGTTGTACTGCTTACAACTT+GGG | + | chr4.3:6668123-6668142 | MS.gene000931:intron | 40.0% | |
| TAACTTGAAATCCTCCACAC+AGG | - | chr4.3:6666986-6667005 | None:intergenic | 40.0% | |
| TAATTACAAAGCATGACGGC+GGG | - | chr4.3:6666784-6666803 | None:intergenic | 40.0% | |
| TCTGCATTTGAGAAAGCTTC+TGG | + | chr4.3:6668180-6668199 | MS.gene000931:CDS | 40.0% | |
| TGACCATATACATTGAGCTC+AGG | - | chr4.3:6667420-6667439 | None:intergenic | 40.0% | |
| TGGTACATCTGTGCTTGAAA+TGG | + | chr4.3:6668155-6668174 | MS.gene000931:CDS | 40.0% | |
| TGGTCATGATTATCCTACCA+GGG | + | chr4.3:6667434-6667453 | MS.gene000931:CDS | 40.0% | |
| TTACAAGCCATGAATCCCTA+TGG | + | chr4.3:6667003-6667022 | MS.gene000931:CDS | 40.0% | |
| TTCATCTTCCCAAAAGATCC+TGG | + | chr4.3:6665788-6665807 | MS.gene000931:CDS | 40.0% | |
| TTTCAAGCACAGATGTACCA+CGG | - | chr4.3:6668155-6668174 | None:intergenic | 40.0% | |
| TTTGCTGGATTAAAAGCCGT+TGG | + | chr4.3:6666141-6666160 | MS.gene000931:CDS | 40.0% | |
| ! | ATTACGTTAGAGGCATGTAC+TGG | + | chr4.3:6667995-6668014 | MS.gene000931:intron | 40.0% |
| ! | CTTTTCGCAACGGAAAACAT+AGG | + | chr4.3:6667909-6667928 | MS.gene000931:CDS | 40.0% |
| ! | CTTTTCTTCAGGGCCAAATA+TGG | + | chr4.3:6668633-6668652 | MS.gene000931:intron | 40.0% |
| ! | TCGAGATTCTGAGAAAGTTG+AGG | - | chr4.3:6665948-6665967 | None:intergenic | 40.0% |
| ! | TGCAGAAGCACAAACATGTT+AGG | - | chr4.3:6666911-6666930 | None:intergenic | 40.0% |
| !!! | GATTGTTTTGACCGAGCTTA+TGG | + | chr4.3:6666429-6666448 | MS.gene000931:intron | 40.0% |
| AAGCTCAGAAAGAACTTGGC+TGG | + | chr4.3:6668399-6668418 | MS.gene000931:CDS | 45.0% | |
| AATCCAAACCAGAGAGCGAT+TGG | - | chr4.3:6666371-6666390 | None:intergenic | 45.0% | |
| AATTACAAAGCATGACGGCG+GGG | - | chr4.3:6666783-6666802 | None:intergenic | 45.0% | |
| ACTGCTTACAACTTGGGAAC+TGG | + | chr4.3:6668129-6668148 | MS.gene000931:CDS | 45.0% | |
| CACCGAGTTTACCACTTTCA+TGG | - | chr4.3:6667332-6667351 | None:intergenic | 45.0% | |
| CATCTGCTAAGTCCATCACA+TGG | - | chr4.3:6667866-6667885 | None:intergenic | 45.0% | |
| CATGATTATCCTACCAGGGA+TGG | + | chr4.3:6667438-6667457 | MS.gene000931:CDS | 45.0% | |
| CCAAGGTAACTATCACCCAT+CGG | + | chr4.3:6667031-6667050 | MS.gene000931:intron | 45.0% | |
| CGTTGCGAAAAGCTTTCTCA+CGG | - | chr4.3:6667901-6667920 | None:intergenic | 45.0% | |
| GACCAACAAGTTCACGAACA+CGG | - | chr4.3:6665926-6665945 | None:intergenic | 45.0% | |
| GCCCATGAAAGTGGTAAACT+CGG | + | chr4.3:6667327-6667346 | MS.gene000931:CDS | 45.0% | |
| TCGGGACTATATCCATGTGA+TGG | + | chr4.3:6667851-6667870 | MS.gene000931:CDS | 45.0% | |
| TCTGAGAGAGCTTATGTCAG+CGG | - | chr4.3:6666411-6666430 | None:intergenic | 45.0% | |
| TGTTTGTGCTTCTGCACAGA+TGG | + | chr4.3:6666915-6666934 | MS.gene000931:intron | 45.0% | |
| TTCAGATAGCTGAGCCAGAA+TGG | + | chr4.3:6667268-6667287 | MS.gene000931:CDS | 45.0% | |
| ! | AGATTATTTGGGATGCCCCT+GGG | - | chr4.3:6667360-6667379 | None:intergenic | 45.0% |
| ! | CGTGAGAAAGCTTTTCGCAA+CGG | + | chr4.3:6667899-6667918 | MS.gene000931:CDS | 45.0% |
| ! | TAAACTCGGTGAAGATCCCA+GGG | + | chr4.3:6667341-6667360 | MS.gene000931:CDS | 45.0% |
| !! | CATGTGATGGACTTAGCAGA+TGG | + | chr4.3:6667864-6667883 | MS.gene000931:CDS | 45.0% |
| AACAACCCATGGGGTTACTC+GGG | + | chr4.3:6668696-6668715 | MS.gene000931:CDS | 50.0% | |
| AAGCCATGAATCCCTATGGC+CGG | + | chr4.3:6667007-6667026 | MS.gene000931:CDS | 50.0% | |
| AAGTTGTGTCCAAGAAGGCC+GGG | + | chr4.3:6668344-6668363 | MS.gene000931:CDS | 50.0% | |
| ACCTGACACAATACCCTGTG+TGG | + | chr4.3:6666969-6666988 | MS.gene000931:CDS | 50.0% | |
| ACGGTGCTTCAGCTTCTTCA+AGG | + | chr4.3:6665843-6665862 | MS.gene000931:CDS | 50.0% | |
| ACTGGGCTAAGAACAACCCA+TGG | + | chr4.3:6668685-6668704 | MS.gene000931:CDS | 50.0% | |
| ATGGTGTAGAGGAGATGTGC+AGG | + | chr4.3:6668652-6668671 | MS.gene000931:CDS | 50.0% | |
| CAGGGCCAAATATGGTGTAG+AGG | + | chr4.3:6668641-6668660 | MS.gene000931:intron | 50.0% | |
| CCGATGGGTGATAGTTACCT+TGG | - | chr4.3:6667034-6667053 | None:intergenic | 50.0% | |
| CTGGGCTAAGAACAACCCAT+GGG | + | chr4.3:6668686-6668705 | MS.gene000931:CDS | 50.0% | |
| GAACAACCCATGGGGTTACT+CGG | + | chr4.3:6668695-6668714 | MS.gene000931:CDS | 50.0% | |
| GAAGTTGTGTCCAAGAAGGC+CGG | + | chr4.3:6668343-6668362 | MS.gene000931:CDS | 50.0% | |
| GACCGTGTTCGTGAACTTGT+TGG | + | chr4.3:6665921-6665940 | MS.gene000931:CDS | 50.0% | |
| GGGTGATAGTTACCTTGGTC+CGG | - | chr4.3:6667029-6667048 | None:intergenic | 50.0% | |
| GTGCTTCAGCTTCTTCAAGG+TGG | + | chr4.3:6665846-6665865 | MS.gene000931:CDS | 50.0% | |
| GTGTTTGTCCAATCGCTCTC+TGG | + | chr4.3:6666360-6666379 | MS.gene000931:intron | 50.0% | |
| TAAACCTCAGTAGCATCCCC+CGG | - | chr4.3:6668365-6668384 | None:intergenic | 50.0% | |
| TCCCAAAAGATCCTGGTCAC+CGG | + | chr4.3:6665795-6665814 | MS.gene000931:CDS | 50.0% | |
| TGACACAATACCCTGTGTGG+AGG | + | chr4.3:6666972-6666991 | MS.gene000931:CDS | 50.0% | |
| TGGGCTAAGAACAACCCATG+GGG | + | chr4.3:6668687-6668706 | MS.gene000931:CDS | 50.0% | |
| TGGTGTAGAGGAGATGTGCA+GGG | + | chr4.3:6668653-6668672 | MS.gene000931:CDS | 50.0% | |
| TGGTTTCATCGGCACTCACA+CGG | + | chr4.3:6665824-6665843 | MS.gene000931:CDS | 50.0% | |
| TGTCCAATCGCTCTCTGGTT+TGG | + | chr4.3:6666365-6666384 | MS.gene000931:intron | 50.0% | |
| ! | AAACTCGGTGAAGATCCCAG+GGG | + | chr4.3:6667342-6667361 | MS.gene000931:CDS | 50.0% |
| ! | ACCGGTGACCAGGATCTTTT+GGG | - | chr4.3:6665799-6665818 | None:intergenic | 50.0% |
| ! | GACGCGGTGATTCATTTTGC+TGG | + | chr4.3:6666126-6666145 | MS.gene000931:CDS | 50.0% |
| ! | GAGATTATTTGGGATGCCCC+TGG | - | chr4.3:6667361-6667380 | None:intergenic | 50.0% |
| ! | GTAAACTCGGTGAAGATCCC+AGG | + | chr4.3:6667340-6667359 | MS.gene000931:CDS | 50.0% |
| !! | TCCACACAGGGTATTGTGTC+AGG | - | chr4.3:6666973-6666992 | None:intergenic | 50.0% |
| ACAACCCATGGGGTTACTCG+GGG | + | chr4.3:6668697-6668716 | MS.gene000931:CDS | 55.0% | |
| AGGAGATGTGCAGGGATCAG+TGG | + | chr4.3:6668661-6668680 | MS.gene000931:CDS | 55.0% | |
| AGTTACCTTGGTCCGGCCAT+AGG | - | chr4.3:6667022-6667041 | None:intergenic | 55.0% | |
| AGTTGTGTCCAAGAAGGCCG+GGG | + | chr4.3:6668345-6668364 | MS.gene000931:CDS | 55.0% | |
| CAAAAGATCCTGGTCACCGG+TGG | + | chr4.3:6665798-6665817 | MS.gene000931:CDS | 55.0% | |
| CCACTTTCATGGGCTCCAAC+TGG | - | chr4.3:6667321-6667340 | None:intergenic | 55.0% | |
| CCAGTTGGAGCCCATGAAAG+TGG | + | chr4.3:6667318-6667337 | MS.gene000931:CDS | 55.0% | |
| GTGCAGGGATCAGTGGAACT+GGG | + | chr4.3:6668668-6668687 | MS.gene000931:CDS | 55.0% | |
| GTTACCTTGGTCCGGCCATA+GGG | - | chr4.3:6667021-6667040 | None:intergenic | 55.0% | |
| TACAACTTGGGAACTGGCCG+TGG | + | chr4.3:6668135-6668154 | MS.gene000931:CDS | 55.0% | |
| TGTGCAGGGATCAGTGGAAC+TGG | + | chr4.3:6668667-6668686 | MS.gene000931:CDS | 55.0% | |
| ! | CACCGGTGACCAGGATCTTT+TGG | - | chr4.3:6665800-6665819 | None:intergenic | 55.0% |
| !! | ACCGGTGGTGCTGGTTTCAT+CGG | + | chr4.3:6665813-6665832 | MS.gene000931:CDS | 55.0% |
| ACATACCGCAGAGCCATCCC+TGG | - | chr4.3:6667454-6667473 | None:intergenic | 60.0% | |
| GAATCCCTATGGCCGGACCA+AGG | + | chr4.3:6667014-6667033 | MS.gene000931:CDS | 60.0% | |
| GCCGATGAAACCAGCACCAC+CGG | - | chr4.3:6665817-6665836 | None:intergenic | 60.0% | |
| GCTTCCCCGAGTAACCCCAT+GGG | - | chr4.3:6668704-6668723 | None:intergenic | 60.0% | |
| GGTCCGGCCATAGGGATTCA+TGG | - | chr4.3:6667013-6667032 | None:intergenic | 60.0% | |
| GTTGTGTCCAAGAAGGCCGG+GGG | + | chr4.3:6668346-6668365 | MS.gene000931:CDS | 60.0% | |
| ! | TCCTACCAGGGATGGCTCTG+CGG | + | chr4.3:6667446-6667465 | MS.gene000931:CDS | 60.0% |
| AACCAGCACCACCGGTGACC+AGG | - | chr4.3:6665809-6665828 | None:intergenic | 65.0% | |
| AAGGCCGGGGGATGCTACTG+AGG | + | chr4.3:6668358-6668377 | MS.gene000931:CDS | 65.0% | |
| ACCGCAGAGCCATCCCTGGT+AGG | - | chr4.3:6667450-6667469 | None:intergenic | 65.0% | |
| ATCCTGGTCACCGGTGGTGC+TGG | + | chr4.3:6665804-6665823 | MS.gene000931:CDS | 65.0% | |
| GGCTTCCCCGAGTAACCCCA+TGG | - | chr4.3:6668705-6668724 | None:intergenic | 65.0% | |
| GTAGCATCCCCCGGCCTTCT+TGG | - | chr4.3:6668356-6668375 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 6665783 | 6668728 | 6665783 | ID=MS.gene000931 |
| chr4.3 | mRNA | 6665783 | 6668728 | 6665783 | ID=MS.gene000931.t1;Parent=MS.gene000931 |
| chr4.3 | exon | 6665783 | 6666027 | 6665783 | ID=MS.gene000931.t1.exon1;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6665783 | 6666027 | 6665783 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6666122 | 6666257 | 6666122 | ID=MS.gene000931.t1.exon2;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6666122 | 6666257 | 6666122 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6666934 | 6667035 | 6666934 | ID=MS.gene000931.t1.exon3;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6666934 | 6667035 | 6666934 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6667240 | 6667467 | 6667240 | ID=MS.gene000931.t1.exon4;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6667240 | 6667467 | 6667240 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6667849 | 6667930 | 6667849 | ID=MS.gene000931.t1.exon5;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6667849 | 6667930 | 6667849 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6668124 | 6668206 | 6668124 | ID=MS.gene000931.t1.exon6;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6668124 | 6668206 | 6668124 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6668332 | 6668423 | 6668332 | ID=MS.gene000931.t1.exon7;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6668332 | 6668423 | 6668332 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| chr4.3 | exon | 6668644 | 6668728 | 6668644 | ID=MS.gene000931.t1.exon8;Parent=MS.gene000931.t1 |
| chr4.3 | CDS | 6668644 | 6668728 | 6668644 | ID=cds.MS.gene000931.t1;Parent=MS.gene000931.t1 |
| Gene Sequence |
| Protein sequence |
