AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31166

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31166.t1 MTR_2g096660 99.715 351 1 0 1 351 1 351 0.0 727
MS.gene31166.t1 MTR_4g063600 90.000 350 29 1 1 350 1 344 0.0 656
MS.gene31166.t1 MTR_4g063600 89.143 350 29 2 1 350 1 341 0.0 645
MS.gene31166.t1 MTR_4g120030 70.846 319 87 2 27 345 100 412 3.81e-163 462
MS.gene31166.t1 MTR_1g088480 71.704 311 82 2 35 345 115 419 3.55e-161 458
MS.gene31166.t1 MTR_1g067530 62.941 340 93 2 38 345 112 450 1.38e-148 427
MS.gene31166.t1 MTR_1g107455 30.659 349 188 12 38 334 19 365 2.51e-31 122
MS.gene31166.t1 MTR_4g056100 29.395 347 195 11 38 334 19 365 6.01e-31 121
MS.gene31166.t1 MTR_4g053420 28.613 346 196 11 38 334 14 357 8.08e-31 120
MS.gene31166.t1 MTR_7g115080 26.857 350 223 10 1 336 1 331 7.87e-28 112
MS.gene31166.t1 MTR_7g115080 26.857 350 223 10 1 336 35 365 8.17e-28 112
MS.gene31166.t1 MTR_7g115080 27.011 348 221 10 1 334 14 342 8.60e-28 112
MS.gene31166.t1 MTR_2g073240 30.892 314 188 10 40 334 21 324 2.87e-27 113
MS.gene31166.t1 MTR_1g108530 28.916 332 198 11 38 334 19 347 5.95e-27 109
MS.gene31166.t1 MTR_4g056100 30.420 286 162 9 38 286 19 304 1.05e-26 108
MS.gene31166.t1 MTR_0034s0060 29.936 314 191 10 40 334 139 442 1.38e-25 108
MS.gene31166.t1 MTR_1g080950 28.662 314 199 11 38 336 28 331 5.71e-25 104
MS.gene31166.t1 MTR_1g009600 28.660 321 202 9 40 342 7 318 8.57e-25 105
MS.gene31166.t1 MTR_1g080950 28.662 314 199 11 38 336 64 367 8.75e-25 104
MS.gene31166.t1 MTR_4g056100 29.502 261 151 7 38 265 19 279 2.82e-23 98.2
MS.gene31166.t1 MTR_4g129820 26.567 335 200 13 35 334 92 415 5.45e-19 87.8
MS.gene31166.t1 MTR_5g011940 26.667 330 204 12 36 334 88 410 7.48e-18 84.7
MS.gene31166.t1 MTR_2g032100 25.217 345 205 12 20 324 53 384 4.20e-17 82.4
MS.gene31166.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.76e-17 81.6
MS.gene31166.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.76e-17 81.6
MS.gene31166.t1 MTR_3g084090 25.758 330 199 13 40 334 101 419 2.87e-16 80.1
MS.gene31166.t1 MTR_4g024600 24.324 333 210 12 35 334 98 421 1.34e-14 74.7
MS.gene31166.t1 MTR_8g099535 26.970 330 203 13 36 332 2 326 1.53e-14 74.3
MS.gene31166.t1 MTR_4g102270 25.758 330 207 13 36 334 91 413 2.00e-14 74.3
MS.gene31166.t1 MTR_8g096880 24.620 329 206 13 35 327 3 325 4.90e-13 69.7
MS.gene31166.t1 MTR_5g009160 26.061 330 206 13 36 332 2 326 1.25e-12 68.6
MS.gene31166.t1 MTR_8g096880 24.465 327 205 13 35 325 3 323 1.33e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31166.t1 AT5G59290 90.476 336 32 0 14 349 21 356 0.0 629
MS.gene31166.t1 AT2G28760 86.571 350 40 1 1 350 32 374 0.0 628
MS.gene31166.t1 AT5G59290 90.476 336 32 0 14 349 6 341 0.0 627
MS.gene31166.t1 AT2G28760 86.571 350 40 1 1 350 1 343 0.0 626
MS.gene31166.t1 AT2G28760 86.571 350 40 1 1 350 1 343 0.0 626
MS.gene31166.t1 AT2G28760 86.571 350 40 1 1 350 1 343 0.0 626
MS.gene31166.t1 AT3G46440 90.476 336 32 0 12 347 3 338 0.0 626
MS.gene31166.t1 AT3G46440 90.476 336 32 0 12 347 3 338 0.0 626
MS.gene31166.t1 AT5G59290 92.332 313 24 0 37 349 22 334 0.0 609
MS.gene31166.t1 AT5G59290 92.308 312 24 0 38 349 1 312 0.0 608
MS.gene31166.t1 AT2G47650 73.377 308 81 1 38 345 121 427 1.81e-165 469
MS.gene31166.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.13e-164 467
MS.gene31166.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.13e-164 467
MS.gene31166.t1 AT2G47650 71.975 314 81 2 38 345 121 433 8.46e-163 462
MS.gene31166.t1 AT3G53520 71.061 311 89 1 35 345 117 426 9.24e-163 462
MS.gene31166.t1 AT3G53520 70.740 311 88 2 35 345 117 424 5.93e-160 455
MS.gene31166.t1 AT3G53520 64.583 336 91 3 35 345 117 449 1.73e-152 437
MS.gene31166.t1 AT3G53520 75.225 222 54 1 35 256 117 337 5.04e-119 348
MS.gene31166.t1 AT1G08200 30.836 347 190 12 38 334 18 364 2.98e-33 127
MS.gene31166.t1 AT2G27860 30.548 347 191 12 38 334 18 364 3.69e-32 124
MS.gene31166.t1 AT1G53500 30.032 313 192 9 40 334 11 314 5.84e-28 115
MS.gene31166.t1 AT1G78570 30.032 313 192 9 40 334 9 312 3.69e-27 112
MS.gene31166.t1 AT3G14790 30.032 313 192 9 40 334 12 315 1.10e-26 111
MS.gene31166.t1 AT3G14790 30.032 313 192 9 40 334 9 312 1.21e-26 111
MS.gene31166.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.01e-24 101
MS.gene31166.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.01e-24 101
MS.gene31166.t1 AT2G28755 70.175 57 17 0 254 310 4 60 4.90e-21 85.9
MS.gene31166.t1 AT4G20460 25.294 340 213 10 22 327 54 386 3.03e-19 88.6
MS.gene31166.t1 AT5G44480 25.723 346 203 12 30 334 63 395 4.21e-19 88.2
MS.gene31166.t1 AT5G44480 25.723 346 203 12 30 334 63 395 4.21e-19 88.2
MS.gene31166.t1 AT5G44480 25.723 346 203 12 30 334 63 395 4.21e-19 88.2
MS.gene31166.t1 AT5G44480 25.723 346 203 12 30 334 87 419 5.45e-19 88.2
MS.gene31166.t1 AT1G30620 25.439 342 214 10 20 327 53 387 2.18e-17 83.2
MS.gene31166.t1 AT1G30620 25.439 342 214 10 20 327 53 387 2.18e-17 83.2
MS.gene31166.t1 AT1G30620 25.439 342 214 10 20 327 53 387 2.18e-17 83.2
MS.gene31166.t1 AT1G30620 25.439 342 214 10 20 327 53 387 2.18e-17 83.2
MS.gene31166.t1 AT1G30620 25.731 342 213 10 20 327 52 386 4.45e-17 82.4
MS.gene31166.t1 AT2G45310 24.566 346 215 12 24 334 83 417 1.23e-16 81.3
MS.gene31166.t1 AT4G00110 24.545 330 203 12 40 334 93 411 6.29e-15 75.9
MS.gene31166.t1 AT1G73250 24.684 316 210 7 31 334 10 309 2.70e-14 73.2
MS.gene31166.t1 AT4G12250 25.301 332 208 13 35 334 93 416 1.15e-13 72.0
MS.gene31166.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.51e-11 65.1
MS.gene31166.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.51e-11 65.1
MS.gene31166.t1 AT1G17890 23.511 319 210 10 31 334 13 312 1.55e-11 65.1

Find 94 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTATTTAGTTCTTTC+TGG 0.093558 2.4:-6762555 None:intergenic
ACATTTCCCCAGTAAGTTTC+TGG 0.163549 2.4:-6760717 None:intergenic
GCAATTCACCTGAAAGAATT+TGG 0.163974 2.4:-6758774 None:intergenic
TATAAATATCCTACCTTTAC+AGG 0.215426 2.4:-6760118 None:intergenic
GCGCGATGGCCTTCCTCTTA+TGG 0.270618 2.4:+6762502 MS.gene31166:CDS
ACAATAAAGACTAATGTAAT+TGG 0.274753 2.4:+6760503 MS.gene31166:CDS
CCAGTCCAATATGAGAATTT+TGG 0.274767 2.4:+6759292 MS.gene31166:intron
TTTAATATGTATTAGGTTGA+TGG 0.307326 2.4:+6761898 MS.gene31166:intron
CCTGGAAGTTGGACTGTTAA+GGG 0.329431 2.4:-6761764 None:intergenic
ATCCACAACCAGAAACTTAC+TGG 0.331588 2.4:+6760709 MS.gene31166:CDS
AAACTGCGAGTTTGTGTTCC+TGG 0.333294 2.4:-6761782 None:intergenic
TCACCTTGTTGACAGATTGA+TGG 0.336356 2.4:+6759343 MS.gene31166:CDS
TCCTGGAAGTTGGACTGTTA+AGG 0.339907 2.4:-6761765 None:intergenic
CCCCAGTAAGTTTCTGGTTG+TGG 0.341452 2.4:-6760711 None:intergenic
CTCCTTCCATGAGGCGAATT+AGG 0.346004 2.4:-6761921 None:intergenic
TGGAAGAGGATTTCCGTCTA+AGG 0.354083 2.4:+6762522 MS.gene31166:CDS
GGATTGTATTTGTAGAAGAT+TGG 0.356058 2.4:-6760097 None:intergenic
AGGATTTCCGTCTAAGGCTT+GGG 0.356905 2.4:+6762528 MS.gene31166:CDS
CCCTTAACAGTCCAACTTCC+AGG 0.358179 2.4:+6761764 MS.gene31166:CDS
CCATCGCGCAACTTGACCTT+TGG 0.359997 2.4:-6762488 None:intergenic
TTTCTTTGCCGAGGATCATC+AGG 0.362452 2.4:-6762425 None:intergenic
AACTTTATTTAGTTCTTTCT+GGG 0.379408 2.4:-6762554 None:intergenic
CCTGGGTTCCCAATGTTGAT+TGG 0.380574 2.4:-6761955 None:intergenic
TATCATAGGCAGCATGGATT+AGG 0.389706 2.4:+6761258 MS.gene31166:CDS
ACATCTACTTCAGAAGTATA+TGG 0.391713 2.4:+6760672 MS.gene31166:CDS
GGTCACCAAAATTCTCATAT+TGG 0.401935 2.4:-6759297 None:intergenic
CTTTGATGTTTGATTATCAT+AGG 0.405550 2.4:+6761244 MS.gene31166:CDS
GCTAGAATCTTCAATACATA+TGG 0.407438 2.4:+6761399 MS.gene31166:CDS
TCTAATGGAGATCAACATAA+TGG 0.411457 2.4:+6758698 MS.gene31166:CDS
TCTGGTTGTGGATGGATAAG+AGG 0.414750 2.4:-6760699 None:intergenic
CGGAAATCCTCTTCCATAAG+AGG 0.416548 2.4:-6762515 None:intergenic
TGGGGAAATGTCAATCCTAT+TGG 0.418871 2.4:+6760729 MS.gene31166:CDS
TCAACATAATGGAGATCAAC+AGG 0.425684 2.4:+6758709 MS.gene31166:CDS
TTGGAACACTGAACATGCTT+GGG 0.433117 2.4:+6760522 MS.gene31166:CDS
ACCAATAAAACCAGCTCCTC+CGG 0.437691 2.4:-6759318 None:intergenic
ATGGCTGCGAATTCGTCTAA+TGG 0.442520 2.4:+6758683 MS.gene31166:CDS
GAGGATTTCCGTCTAAGGCT+TGG 0.451269 2.4:+6762527 MS.gene31166:CDS
ACTTTATTGCTCAAGCAATT+CGG 0.455967 2.4:+6761460 MS.gene31166:CDS
CACTCTTGGTTGAGGTTGAT+CGG 0.457395 2.4:+6760047 MS.gene31166:CDS
GTAGCTGATAATTACTTCAC+TGG 0.462377 2.4:+6759485 MS.gene31166:CDS
ACCATCTTTATCTCCACAGC+TGG 0.464169 2.4:-6762392 None:intergenic
TTGTAGAAGATTGGAGAAGC+AGG 0.479045 2.4:-6760088 None:intergenic
GAGAAGCAGGGCAGGCAAGA+TGG 0.485305 2.4:-6760075 None:intergenic
GAAGATTGGAGAAGCAGGGC+AGG 0.487084 2.4:-6760083 None:intergenic
CTTGGGCTTGCAAAGCGAGT+TGG 0.491265 2.4:+6760539 MS.gene31166:CDS
AAGCAACAGAATTGCTTGGA+TGG 0.498380 2.4:+6762462 MS.gene31166:CDS
CCACGCATGAATATCGATGA+TGG 0.501885 2.4:+6761423 MS.gene31166:CDS
TGGCCTTCCTCTTATGGAAG+AGG 0.511492 2.4:+6762508 MS.gene31166:CDS
ATTGGAACACTGAACATGCT+TGG 0.517074 2.4:+6760521 MS.gene31166:CDS
AGTAAGTTTCTGGTTGTGGA+TGG 0.517662 2.4:-6760707 None:intergenic
ACACTGGTCCAATCAACATT+GGG 0.518433 2.4:+6761947 MS.gene31166:CDS
CTACAAATACAATCCTGTAA+AGG 0.522717 2.4:+6760105 MS.gene31166:CDS
ACAAAAGCAACAGAATTGCT+TGG 0.526474 2.4:+6762458 MS.gene31166:CDS
AGCAACAGAATTGCTTGGAT+GGG 0.536467 2.4:+6762463 MS.gene31166:CDS
AACACTGGTCCAATCAACAT+TGG 0.539937 2.4:+6761946 MS.gene31166:CDS
TGATGGCCTAATTCGCCTCA+TGG 0.540095 2.4:+6761915 MS.gene31166:CDS
CTGGTTGTGGATGGATAAGA+GGG 0.540478 2.4:-6760698 None:intergenic
TTGGAAAATCGCAATGGAGA+TGG 0.541134 2.4:-6758755 None:intergenic
CGCAATGGAGATGGCAAGGG+AGG 0.542957 2.4:-6758746 None:intergenic
TGTAGAAGATTGGAGAAGCA+GGG 0.544155 2.4:-6760087 None:intergenic
GAGTTTGTGTTCCTGGAAGT+TGG 0.549267 2.4:-6761775 None:intergenic
TCCACAACCAGAAACTTACT+GGG 0.551916 2.4:+6760710 MS.gene31166:CDS
GGCCTAATTCGCCTCATGGA+AGG 0.552535 2.4:+6761919 MS.gene31166:CDS
TTTGATTATCATAGGCAGCA+TGG 0.553866 2.4:+6761252 MS.gene31166:CDS
TTCTTTGCCGAGGATCATCA+GGG 0.558934 2.4:-6762424 None:intergenic
TGGGAACCCCAAGCCTTAGA+CGG 0.568610 2.4:-6762535 None:intergenic
GGATTTCCGTCTAAGGCTTG+GGG 0.572674 2.4:+6762529 MS.gene31166:CDS
AAATCGCAATGGAGATGGCA+AGG 0.575531 2.4:-6758750 None:intergenic
CCAATCAACATTGGGAACCC+AGG 0.578663 2.4:+6761955 MS.gene31166:CDS
CACGCATGAATATCGATGAT+GGG 0.584892 2.4:+6761424 MS.gene31166:CDS
AAGAATTTGGAAAATCGCAA+TGG 0.585583 2.4:-6758761 None:intergenic
AGTTCGGAGTTGCTATGATG+AGG 0.589902 2.4:+6761203 MS.gene31166:CDS
TGACGAATTAGCTCAAATCT+CGG 0.598140 2.4:-6759542 None:intergenic
TTGCAAAGCGAGTTGGAGCA+AGG 0.600057 2.4:+6760546 MS.gene31166:CDS
AGATGTGACAGAGACACTCT+TGG 0.602084 2.4:+6760033 MS.gene31166:intron
TCCAGCTGTGGAGATAAAGA+TGG 0.604901 2.4:+6762391 MS.gene31166:CDS
GTTCGGAGTTGCTATGATGA+GGG 0.608208 2.4:+6761204 MS.gene31166:CDS
AGAACACCCCTGATGATCCT+CGG 0.608361 2.4:+6762417 MS.gene31166:CDS
AGATTTGAGCTAATTCGTCA+TGG 0.615076 2.4:+6759545 MS.gene31166:CDS
GTAGCTTATTAATCCAGCTG+TGG 0.615875 2.4:+6762379 MS.gene31166:intron
GACAGAGACACTCTTGGTTG+AGG 0.616315 2.4:+6760039 MS.gene31166:CDS
CCAAAGGTCAAGTTGCGCGA+TGG 0.618122 2.4:+6762488 MS.gene31166:CDS
AATCCTCTTCCATAAGAGGA+AGG 0.634078 2.4:-6762511 None:intergenic
TTTCCATCAATCTGTCAACA+AGG 0.639034 2.4:-6759346 None:intergenic
ATTGCTTGGATGGGAACCAA+AGG 0.642197 2.4:+6762472 MS.gene31166:CDS
TTTCTGCTATGTCTCTGACA+TGG 0.642724 2.4:+6761802 MS.gene31166:CDS
TGAACTTGCTGAGAATGTGA+AGG 0.652182 2.4:+6762089 MS.gene31166:CDS
AATCGCAATGGAGATGGCAA+GGG 0.667252 2.4:-6758749 None:intergenic
CTATGATGAGGGCAAGCGTG+TGG 0.675259 2.4:+6761215 MS.gene31166:CDS
CCATCATCGATATTCATGCG+TGG 0.676212 2.4:-6761423 None:intergenic
ACTTGCTGAGAATGTGAAGG+AGG 0.688062 2.4:+6762092 MS.gene31166:CDS
TCTTTGCCGAGGATCATCAG+GGG 0.694879 2.4:-6762423 None:intergenic
CTCATGGAAGGAGAAAACAC+TGG 0.733060 2.4:+6761931 MS.gene31166:CDS
CCACAACCAGAAACTTACTG+GGG 0.759842 2.4:+6760711 MS.gene31166:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCATTATTATTATATC+CGG + chr2.4:6760393-6760412 MS.gene31166:intron 10.0%
!!! TTTTTTGTAAACATTTTTAA+TGG + chr2.4:6760886-6760905 MS.gene31166:intron 10.0%
!! AAAATTCGTACATAAATTTA+AGG - chr2.4:6760376-6760395 None:intergenic 15.0%
!! AAAGATGAAAAAAAATGAAT+TGG - chr2.4:6761343-6761362 None:intergenic 15.0%
!! AAATTCGTACATAAATTTAA+GGG - chr2.4:6760375-6760394 None:intergenic 15.0%
!! ATTATTCATATTATTCTTTC+AGG + chr2.4:6762051-6762070 MS.gene31166:intron 15.0%
!! CATAGTTTATTAAAAACAAT+GGG - chr2.4:6759979-6759998 None:intergenic 15.0%
!! TTATACTTACAAGAAAAAAT+TGG - chr2.4:6759761-6759780 None:intergenic 15.0%
!!! TATTATTTATTTCTTATTCG+TGG + chr2.4:6759234-6759253 MS.gene31166:intron 15.0%
!!! TTGTAAGTATAAAGTATTTA+GGG + chr2.4:6759769-6759788 MS.gene31166:intron 15.0%
!! AAAATATAAGACCTATACAT+TGG - chr2.4:6762243-6762262 None:intergenic 20.0%
!! AAACAATCAAAATGACAAAA+CGG - chr2.4:6758822-6758841 None:intergenic 20.0%
!! AATTCGTACATAAATTTAAG+GGG - chr2.4:6760374-6760393 None:intergenic 20.0%
!! ACAATAAAGACTAATGTAAT+TGG + chr2.4:6760503-6760522 MS.gene31166:CDS 20.0%
!! CCATAGTTTATTAAAAACAA+TGG - chr2.4:6759980-6759999 None:intergenic 20.0%
!! GAAAATATATACTGTAAACT+CGG + chr2.4:6761573-6761592 MS.gene31166:intron 20.0%
!! TAAATTACACTAAATCTTTG+AGG - chr2.4:6761165-6761184 None:intergenic 20.0%
!! TCAAATTATCTAACATTCAA+AGG + chr2.4:6760467-6760486 MS.gene31166:intron 20.0%
!! TCTCAAATATATGCAAAAAT+TGG + chr2.4:6759689-6759708 MS.gene31166:intron 20.0%
!! TGAATGTTAGATAATTTGAA+AGG - chr2.4:6760466-6760485 None:intergenic 20.0%
!!! ATTTAAGAATTTTTCACAAC+AGG + chr2.4:6761180-6761199 MS.gene31166:intron 20.0%
!!! CCATTGTTTTTAATAAACTA+TGG + chr2.4:6759977-6759996 MS.gene31166:intron 20.0%
!!! CTAATTTAGTGGTTTATTTT+TGG + chr2.4:6760804-6760823 MS.gene31166:intron 20.0%
!!! CTTGTAAGTATAAAGTATTT+AGG + chr2.4:6759768-6759787 MS.gene31166:intron 20.0%
!!! TTTAATATGTATTAGGTTGA+TGG + chr2.4:6761898-6761917 MS.gene31166:intron 20.0%
! AAAAACAGAAATGAATGTTG+AGG - chr2.4:6760004-6760023 None:intergenic 25.0%
! AAACATAATCATTTGTTTGG+AGG - chr2.4:6761130-6761149 None:intergenic 25.0%
! AACATAATCATTTGTTTGGA+GGG - chr2.4:6761129-6761148 None:intergenic 25.0%
! AACTAAAGATCCATTCTTAA+AGG - chr2.4:6758999-6759018 None:intergenic 25.0%
! AATAATACAATGAATGATCC+CGG - chr2.4:6759221-6759240 None:intergenic 25.0%
! ACATTCCAAAAGAACTAAAA+TGG - chr2.4:6762129-6762148 None:intergenic 25.0%
! ATGCTATCATTTAGTAATTC+AGG + chr2.4:6759059-6759078 MS.gene31166:intron 25.0%
! ATTCGTACATAAATTTAAGG+GGG - chr2.4:6760373-6760392 None:intergenic 25.0%
! ATTGTACATAGCTGAAAAAA+TGG - chr2.4:6760917-6760936 None:intergenic 25.0%
! CAATAAAAATGACACGAATT+TGG - chr2.4:6758861-6758880 None:intergenic 25.0%
! CCAGATCAAAACATTATTTA+AGG - chr2.4:6761491-6761510 None:intergenic 25.0%
! CTTTGATGTTTGATTATCAT+AGG + chr2.4:6761244-6761263 MS.gene31166:CDS 25.0%
! GCAAAACATAATCATTTGTT+TGG - chr2.4:6761133-6761152 None:intergenic 25.0%
! GTAAAGACAACCTTAAAAAA+TGG + chr2.4:6759510-6759529 MS.gene31166:CDS 25.0%
! TATAAATATCCTACCTTTAC+AGG - chr2.4:6760121-6760140 None:intergenic 25.0%
! TATTATTATATCCGGTAACT+CGG + chr2.4:6760401-6760420 MS.gene31166:intron 25.0%
! TCTACAAGTACAATATCAAA+GGG - chr2.4:6759912-6759931 None:intergenic 25.0%
! TGAAGTTAGTTAATTGTTTG+TGG + chr2.4:6762348-6762367 MS.gene31166:intron 25.0%
! TGCTATCATTTAGTAATTCA+GGG + chr2.4:6759060-6759079 MS.gene31166:intron 25.0%
! TTAAGCTTAAATATAGCATC+AGG - chr2.4:6762186-6762205 None:intergenic 25.0%
! TTATATGCAATAATAGAGTC+AGG - chr2.4:6759609-6759628 None:intergenic 25.0%
! TTCTACAAGTACAATATCAA+AGG - chr2.4:6759913-6759932 None:intergenic 25.0%
!! ATAATTCACCAACACATTTT+GGG - chr2.4:6759104-6759123 None:intergenic 25.0%
!! CTGTAAGATACTTTTGTAAT+TGG - chr2.4:6760332-6760351 None:intergenic 25.0%
!!! ACAAACCATTTTAGTTCTTT+TGG + chr2.4:6762121-6762140 MS.gene31166:intron 25.0%
!!! CCTTAAATAATGTTTTGATC+TGG + chr2.4:6761488-6761507 MS.gene31166:intron 25.0%
!!! TCAAAGAAAGTTGATGTATT+TGG + chr2.4:6759712-6759731 MS.gene31166:intron 25.0%
!!! TGTTAAATATAGCTTGTTAG+TGG + chr2.4:6759792-6759811 MS.gene31166:intron 25.0%
!!! TTATTTTTGGTTAACTGGTT+AGG + chr2.4:6760817-6760836 MS.gene31166:intron 25.0%
AAATACAATCCTGTAAAGGT+AGG + chr2.4:6760109-6760128 MS.gene31166:intron 30.0%
AACCACTAAATTAGACTATC+CGG - chr2.4:6760798-6760817 None:intergenic 30.0%
AAGAATTTGGAAAATCGCAA+TGG - chr2.4:6758764-6758783 None:intergenic 30.0%
AAGCTTAAACCTCTGAATAA+TGG + chr2.4:6762198-6762217 MS.gene31166:intron 30.0%
ACATAATCATTTGTTTGGAG+GGG - chr2.4:6761128-6761147 None:intergenic 30.0%
ACTCTTGAATACCAATGTAT+AGG + chr2.4:6762229-6762248 MS.gene31166:intron 30.0%
ACTTTATTGCTCAAGCAATT+CGG + chr2.4:6761460-6761479 MS.gene31166:CDS 30.0%
AGTTTGGAAATATATGGATG+TGG - chr2.4:6760993-6761012 None:intergenic 30.0%
ATCATTTAGTAATTCAGGGA+AGG + chr2.4:6759064-6759083 MS.gene31166:intron 30.0%
ATCCTGTGAAAATCAAGATT+TGG - chr2.4:6760645-6760664 None:intergenic 30.0%
CTACAAATACAATCCTGTAA+AGG + chr2.4:6760105-6760124 MS.gene31166:CDS 30.0%
GAATTATGTACTTTAGTGAG+AGG + chr2.4:6759117-6759136 MS.gene31166:intron 30.0%
GACAACCTTAAAAAATGGAT+TGG + chr2.4:6759515-6759534 MS.gene31166:CDS 30.0%
GCTAGAATCTTCAATACATA+TGG + chr2.4:6761399-6761418 MS.gene31166:CDS 30.0%
GGATTGTATTTGTAGAAGAT+TGG - chr2.4:6760100-6760119 None:intergenic 30.0%
TACTGCAGTTTGGAAATATA+TGG - chr2.4:6760999-6761018 None:intergenic 30.0%
TCATTTAGTAATTCAGGGAA+GGG + chr2.4:6759065-6759084 MS.gene31166:intron 30.0%
TCTAATGGAGATCAACATAA+TGG + chr2.4:6758698-6758717 MS.gene31166:CDS 30.0%
TGATTGATCTATCTGTCTAA+TGG + chr2.4:6760439-6760458 MS.gene31166:intron 30.0%
TGCAATGATTACAAACCAAT+AGG - chr2.4:6759040-6759059 None:intergenic 30.0%
TTATGTCTTATGCATGTGAA+TGG - chr2.4:6759145-6759164 None:intergenic 30.0%
TTCGTACATAAATTTAAGGG+GGG - chr2.4:6760372-6760391 None:intergenic 30.0%
! AATTTTTCACAACAGGAGTT+CGG + chr2.4:6761187-6761206 MS.gene31166:intron 30.0%
! ACAATGGGAAACACAAATTT+TGG - chr2.4:6759964-6759983 None:intergenic 30.0%
! ACATCTACTTCAGAAGTATA+TGG + chr2.4:6760672-6760691 MS.gene31166:CDS 30.0%
! ATGTTCAGATTTGTGTCATT+TGG + chr2.4:6759646-6759665 MS.gene31166:intron 30.0%
! CATAATTCACCAACACATTT+TGG - chr2.4:6759105-6759124 None:intergenic 30.0%
! TAATTCACCAACACATTTTG+GGG - chr2.4:6759103-6759122 None:intergenic 30.0%
! TACCAAATCTTGATTTTCAC+AGG + chr2.4:6760640-6760659 MS.gene31166:intron 30.0%
!! AATATGAGAATTTTGGTGAC+CGG + chr2.4:6759299-6759318 MS.gene31166:CDS 30.0%
!! GTCAAAGAAGTTGATGTATT+GGG - chr2.4:6759739-6759758 None:intergenic 30.0%
!! TACTAGCTTTGACAAAGTTT+CGG + chr2.4:6759426-6759445 MS.gene31166:intron 30.0%
!!! CGTGTCATTTTTATTGTGTT+TGG + chr2.4:6758865-6758884 MS.gene31166:intron 30.0%
!!! CTTTTGCACTATTTTGAAAC+TGG + chr2.4:6761700-6761719 MS.gene31166:intron 30.0%
!!! GATGACCAATCCATTTTTTA+AGG - chr2.4:6759523-6759542 None:intergenic 30.0%
!!! GTGGTTTATTTTTGGTTAAC+TGG + chr2.4:6760812-6760831 MS.gene31166:intron 30.0%
AACCGGATAGTCTAATTTAG+TGG + chr2.4:6760793-6760812 MS.gene31166:intron 35.0%
ACAAAAGCAACAGAATTGCT+TGG + chr2.4:6762458-6762477 MS.gene31166:CDS 35.0%
ACTGGTATTGTAAAGAAACC+TGG - chr2.4:6761976-6761995 None:intergenic 35.0%
AGATTTGAGCTAATTCGTCA+TGG + chr2.4:6759545-6759564 MS.gene31166:CDS 35.0%
ATAAAGTAACCCAAAGCAAG+TGG - chr2.4:6761096-6761115 None:intergenic 35.0%
CATAAAACACGTTTGGATTG+AGG - chr2.4:6760766-6760785 None:intergenic 35.0%
CCAAAATTCTCATATTGGAC+TGG - chr2.4:6759295-6759314 None:intergenic 35.0%
CTGGTATTGTAAAGAAACCT+GGG - chr2.4:6761975-6761994 None:intergenic 35.0%
GAGGATAAGTATGTACCAAT+AGG - chr2.4:6760747-6760766 None:intergenic 35.0%
GATGGAAAATGAGAAAAACG+AGG + chr2.4:6759361-6759380 MS.gene31166:CDS 35.0%
GATTTAACCCCAAAATGTGT+TGG + chr2.4:6759093-6759112 MS.gene31166:intron 35.0%
GCAATTCACCTGAAAGAATT+TGG - chr2.4:6758777-6758796 None:intergenic 35.0%
GGTCACCAAAATTCTCATAT+TGG - chr2.4:6759300-6759319 None:intergenic 35.0%
GTAGCTGATAATTACTTCAC+TGG + chr2.4:6759485-6759504 MS.gene31166:CDS 35.0%
TAACACTCTTTACTGCAGTT+TGG - chr2.4:6761009-6761028 None:intergenic 35.0%
TATTCGTGGATTCTTAGTCA+TGG + chr2.4:6759248-6759267 MS.gene31166:intron 35.0%
TCGTACATAAATTTAAGGGG+GGG - chr2.4:6760371-6760390 None:intergenic 35.0%
TGACGAATTAGCTCAAATCT+CGG - chr2.4:6759545-6759564 None:intergenic 35.0%
TTGGAAATATATGGATGTGG+TGG - chr2.4:6760990-6761009 None:intergenic 35.0%
TTTCCATCAATCTGTCAACA+AGG - chr2.4:6759349-6759368 None:intergenic 35.0%
TTTGATTATCATAGGCAGCA+TGG + chr2.4:6761252-6761271 MS.gene31166:CDS 35.0%
! CCAGTCCAATATGAGAATTT+TGG + chr2.4:6759292-6759311 MS.gene31166:intron 35.0%
! CTCAATCCAAACGTGTTTTA+TGG + chr2.4:6760764-6760783 MS.gene31166:intron 35.0%
! CTTGTTTGGTGAAGAAAACA+TGG - chr2.4:6761294-6761313 None:intergenic 35.0%
! GCGATTTTCCAAATTCTTTC+AGG + chr2.4:6758766-6758785 MS.gene31166:CDS 35.0%
! TCAACATAATGGAGATCAAC+AGG + chr2.4:6758709-6758728 MS.gene31166:CDS 35.0%
! TGATTATGTTTTGCAACCCA+TGG + chr2.4:6761139-6761158 MS.gene31166:intron 35.0%
! TTGCATATATTTGAGACCAG+AGG - chr2.4:6759685-6759704 None:intergenic 35.0%
! TTGCGTTTTCCATTATTCAG+AGG - chr2.4:6762210-6762229 None:intergenic 35.0%
!! GGTCAAAGAAGTTGATGTAT+TGG - chr2.4:6759740-6759759 None:intergenic 35.0%
!! GTGACTAGTCTACTAAATCA+AGG - chr2.4:6761675-6761694 None:intergenic 35.0%
!!! TCTGTTGCTTTTGTTATGTC+TGG - chr2.4:6762452-6762471 None:intergenic 35.0%
!!! TTTTTGGTTAACTGGTTAGG+TGG + chr2.4:6760820-6760839 MS.gene31166:intron 35.0%
!!! TTTTTTCCTGATCTGCCTAT+TGG + chr2.4:6759022-6759041 MS.gene31166:intron 35.0%
AACACTATGTTTGTCTGCTC+AGG + chr2.4:6759457-6759476 MS.gene31166:intron 40.0%
AACACTGGTCCAATCAACAT+TGG + chr2.4:6761946-6761965 MS.gene31166:CDS 40.0%
AAGCAACAGAATTGCTTGGA+TGG + chr2.4:6762462-6762481 MS.gene31166:CDS 40.0%
AAGTAACTCCTCATCGATAG+AGG + chr2.4:6761311-6761330 MS.gene31166:intron 40.0%
AATCCTCTTCCATAAGAGGA+AGG - chr2.4:6762514-6762533 None:intergenic 40.0%
ACACTGCACATAAGTATCAC+TGG - chr2.4:6761994-6762013 None:intergenic 40.0%
ACACTGGTCCAATCAACATT+GGG + chr2.4:6761947-6761966 MS.gene31166:CDS 40.0%
ACATTTCCCCAGTAAGTTTC+TGG - chr2.4:6760720-6760739 None:intergenic 40.0%
ACTCACCATTGTAAATCAGC+TGG + chr2.4:6759886-6759905 MS.gene31166:intron 40.0%
AGCAACAGAATTGCTTGGAT+GGG + chr2.4:6762463-6762482 MS.gene31166:CDS 40.0%
ATCAAACTGCTAGTGTCAGT+TGG + chr2.4:6760614-6760633 MS.gene31166:intron 40.0%
ATCCACAACCAGAAACTTAC+TGG + chr2.4:6760709-6760728 MS.gene31166:CDS 40.0%
ATGCAATAATAGAGTCAGGC+TGG - chr2.4:6759605-6759624 None:intergenic 40.0%
ATGCACATAATCCGAGTTAC+CGG - chr2.4:6760415-6760434 None:intergenic 40.0%
ATTGGAACACTGAACATGCT+TGG + chr2.4:6760521-6760540 MS.gene31166:CDS 40.0%
CACGCATGAATATCGATGAT+GGG + chr2.4:6761424-6761443 MS.gene31166:CDS 40.0%
CTCTTGAATCTTGATGAGTG+AGG + chr2.4:6761064-6761083 MS.gene31166:intron 40.0%
GTAGCTTATTAATCCAGCTG+TGG + chr2.4:6762379-6762398 MS.gene31166:intron 40.0%
TACAAACCAATAGGCAGATC+AGG - chr2.4:6759031-6759050 None:intergenic 40.0%
TATCATAGGCAGCATGGATT+AGG + chr2.4:6761258-6761277 MS.gene31166:CDS 40.0%
TCACCTTGTTGACAGATTGA+TGG + chr2.4:6759343-6759362 MS.gene31166:CDS 40.0%
TCCACAACCAGAAACTTACT+GGG + chr2.4:6760710-6760729 MS.gene31166:CDS 40.0%
TCGATGAGGAGTTACTTGTT+TGG - chr2.4:6761308-6761327 None:intergenic 40.0%
TGAGAAAAACGAGGTTTGCA+TGG + chr2.4:6759370-6759389 MS.gene31166:intron 40.0%
TGCACATCAATGCTGATCTA+TGG + chr2.4:6761865-6761884 MS.gene31166:intron 40.0%
TGCATGCCATAAAACACGTT+TGG - chr2.4:6760773-6760792 None:intergenic 40.0%
TGGGGAAATGTCAATCCTAT+TGG + chr2.4:6760729-6760748 MS.gene31166:CDS 40.0%
TGTAGAAGATTGGAGAAGCA+GGG - chr2.4:6760090-6760109 None:intergenic 40.0%
TTGGAAAATCGCAATGGAGA+TGG - chr2.4:6758758-6758777 None:intergenic 40.0%
TTGGAACACTGAACATGCTT+GGG + chr2.4:6760522-6760541 MS.gene31166:CDS 40.0%
TTGTAGAAGATTGGAGAAGC+AGG - chr2.4:6760091-6760110 None:intergenic 40.0%
TTTCTGCTATGTCTCTGACA+TGG + chr2.4:6761802-6761821 MS.gene31166:CDS 40.0%
! AAGCCTTTTAGACAGTTCAC+AGG - chr2.4:6760159-6760178 None:intergenic 40.0%
! AGCCTTTTAGACAGTTCACA+GGG - chr2.4:6760158-6760177 None:intergenic 40.0%
! GTGTTTTATGGCATGCAAAC+CGG + chr2.4:6760776-6760795 MS.gene31166:intron 40.0%
!! ACACTAAATCTTTGAGGCCA+TGG - chr2.4:6761159-6761178 None:intergenic 40.0%
!! AGTAAGTTTCTGGTTGTGGA+TGG - chr2.4:6760710-6760729 None:intergenic 40.0%
!! CACTAAATCTTTGAGGCCAT+GGG - chr2.4:6761158-6761177 None:intergenic 40.0%
!! TGAACTTGCTGAGAATGTGA+AGG + chr2.4:6762089-6762108 MS.gene31166:CDS 40.0%
!! TGATTACCAGAGCATTGTTG+TGG + chr2.4:6759195-6759214 MS.gene31166:intron 40.0%
AAACTGCGAGTTTGTGTTCC+TGG - chr2.4:6761785-6761804 None:intergenic 45.0%
AAATCGCAATGGAGATGGCA+AGG - chr2.4:6758753-6758772 None:intergenic 45.0%
AATCGCAATGGAGATGGCAA+GGG - chr2.4:6758752-6758771 None:intergenic 45.0%
ACCAATAAAACCAGCTCCTC+CGG - chr2.4:6759321-6759340 None:intergenic 45.0%
ACCATCTTTATCTCCACAGC+TGG - chr2.4:6762395-6762414 None:intergenic 45.0%
AGATGTGACAGAGACACTCT+TGG + chr2.4:6760033-6760052 MS.gene31166:intron 45.0%
AGCATGCAACAGAAGCTTGT+TGG + chr2.4:6759830-6759849 MS.gene31166:intron 45.0%
AGTTCGGAGTTGCTATGATG+AGG + chr2.4:6761203-6761222 MS.gene31166:CDS 45.0%
ATGGCTGCGAATTCGTCTAA+TGG + chr2.4:6758683-6758702 MS.gene31166:CDS 45.0%
ATTGCTTGGATGGGAACCAA+AGG + chr2.4:6762472-6762491 MS.gene31166:CDS 45.0%
CCACAACCAGAAACTTACTG+GGG + chr2.4:6760711-6760730 MS.gene31166:CDS 45.0%
CCACGCATGAATATCGATGA+TGG + chr2.4:6761423-6761442 MS.gene31166:CDS 45.0%
CCATCATCGATATTCATGCG+TGG - chr2.4:6761426-6761445 None:intergenic 45.0%
CCTGGAAGTTGGACTGTTAA+GGG - chr2.4:6761767-6761786 None:intergenic 45.0%
CGGAAATCCTCTTCCATAAG+AGG - chr2.4:6762518-6762537 None:intergenic 45.0%
CTCATGGAAGGAGAAAACAC+TGG + chr2.4:6761931-6761950 MS.gene31166:CDS 45.0%
CTGGTTGTGGATGGATAAGA+GGG - chr2.4:6760701-6760720 None:intergenic 45.0%
CTTGTTCTTGTGTGTTGCAG+TGG + chr2.4:6761737-6761756 MS.gene31166:intron 45.0%
GAAATGTGTCAGTGCTACAG+AGG - chr2.4:6760187-6760206 None:intergenic 45.0%
GACCCTGTGAACTGTCTAAA+AGG + chr2.4:6760153-6760172 MS.gene31166:intron 45.0%
GAGTTTGTGTTCCTGGAAGT+TGG - chr2.4:6761778-6761797 None:intergenic 45.0%
GGCAATATCCTCTATCGATG+AGG - chr2.4:6761322-6761341 None:intergenic 45.0%
GTGTCTCTGTCACATCTACT+CGG - chr2.4:6760030-6760049 None:intergenic 45.0%
GTTCGGAGTTGCTATGATGA+GGG + chr2.4:6761204-6761223 MS.gene31166:CDS 45.0%
TCCAGCTGTGGAGATAAAGA+TGG + chr2.4:6762391-6762410 MS.gene31166:CDS 45.0%
TCCATTCTTAAAGGCGAGAG+AGG - chr2.4:6758990-6759009 None:intergenic 45.0%
TCCTGGAAGTTGGACTGTTA+AGG - chr2.4:6761768-6761787 None:intergenic 45.0%
TCTGGTTGTGGATGGATAAG+AGG - chr2.4:6760702-6760721 None:intergenic 45.0%
TGGAAGAGGATTTCCGTCTA+AGG + chr2.4:6762522-6762541 MS.gene31166:CDS 45.0%
TGGTTGTACGTTACTTCCTC+TGG + chr2.4:6759666-6759685 MS.gene31166:intron 45.0%
TGTCTCTGTCACATCTACTC+GGG - chr2.4:6760029-6760048 None:intergenic 45.0%
TTCTTTGCCGAGGATCATCA+GGG - chr2.4:6762427-6762446 None:intergenic 45.0%
TTTCTTTGCCGAGGATCATC+AGG - chr2.4:6762428-6762447 None:intergenic 45.0%
! AAGGGCCAGCTGATTTACAA+TGG - chr2.4:6759894-6759913 None:intergenic 45.0%
! ACTTGCTGAGAATGTGAAGG+AGG + chr2.4:6762092-6762111 MS.gene31166:CDS 45.0%
! AGGATTTCCGTCTAAGGCTT+GGG + chr2.4:6762528-6762547 MS.gene31166:CDS 45.0%
! CACTCTTGGTTGAGGTTGAT+CGG + chr2.4:6760047-6760066 MS.gene31166:CDS 45.0%
! CAGTGTTTTCTCCTTCCATG+AGG - chr2.4:6761933-6761952 None:intergenic 45.0%
! CTTTCAGGTGAATTGCTGCA+TGG + chr2.4:6758781-6758800 MS.gene31166:intron 45.0%
! GCACTGACACATTTCCATGT+CGG + chr2.4:6760192-6760211 MS.gene31166:intron 45.0%
! TCCTCTCTCGCCTTTAAGAA+TGG + chr2.4:6758986-6759005 MS.gene31166:intron 45.0%
!! AGGCTTTTGCCACTTGCTTT+GGG + chr2.4:6761084-6761103 MS.gene31166:intron 45.0%
!! ATGAGAATTTTGGTGACCGG+AGG + chr2.4:6759302-6759321 MS.gene31166:CDS 45.0%
!!! ATGTCTGGTTTTCTTTGCCG+AGG - chr2.4:6762437-6762456 None:intergenic 45.0%
!!! TTATATTTTTAATATGTATT+AGG + chr2.4:6761891-6761910 MS.gene31166:intron 5.0%
AAGGGGGGGAGACAAAGAAA+GGG - chr2.4:6760357-6760376 None:intergenic 50.0%
AGAACACCCCTGATGATCCT+CGG + chr2.4:6762417-6762436 MS.gene31166:CDS 50.0%
CCAATCAACATTGGGAACCC+AGG + chr2.4:6761955-6761974 MS.gene31166:CDS 50.0%
CCCTTAACAGTCCAACTTCC+AGG + chr2.4:6761764-6761783 MS.gene31166:CDS 50.0%
CCGACACAGACACATTGACA+CGG - chr2.4:6760281-6760300 None:intergenic 50.0%
CCGTGTCAATGTGTCTGTGT+CGG + chr2.4:6760278-6760297 MS.gene31166:intron 50.0%
CCTGGGTTCCCAATGTTGAT+TGG - chr2.4:6761958-6761977 None:intergenic 50.0%
CGACACAGACACATTGACAC+GGG - chr2.4:6760280-6760299 None:intergenic 50.0%
CTCCTTCCATGAGGCGAATT+AGG - chr2.4:6761924-6761943 None:intergenic 50.0%
GACAGAGACACTCTTGGTTG+AGG + chr2.4:6760039-6760058 MS.gene31166:CDS 50.0%
GTCTCTGTCACATCTACTCG+GGG - chr2.4:6760028-6760047 None:intergenic 50.0%
TAAGGGGGGGAGACAAAGAA+AGG - chr2.4:6760358-6760377 None:intergenic 50.0%
TCTTTGCCGAGGATCATCAG+GGG - chr2.4:6762426-6762445 None:intergenic 50.0%
TGATGGCCTAATTCGCCTCA+TGG + chr2.4:6761915-6761934 MS.gene31166:CDS 50.0%
TGGCCTTCCTCTTATGGAAG+AGG + chr2.4:6762508-6762527 MS.gene31166:CDS 50.0%
! AAAGCGAGTTGGAGCAAGGT+CGG + chr2.4:6760550-6760569 MS.gene31166:intron 50.0%
! GAGGATTTCCGTCTAAGGCT+TGG + chr2.4:6762527-6762546 MS.gene31166:CDS 50.0%
! GGATTTCCGTCTAAGGCTTG+GGG + chr2.4:6762529-6762548 MS.gene31166:CDS 50.0%
! TTGCAAAGCGAGTTGGAGCA+AGG + chr2.4:6760546-6760565 MS.gene31166:CDS 50.0%
!! CCCCAGTAAGTTTCTGGTTG+TGG - chr2.4:6760714-6760733 None:intergenic 50.0%
!! GAGGCTTTTGCCACTTGCTT+TGG + chr2.4:6761083-6761102 MS.gene31166:intron 50.0%
!! TACCAGAGCATTGTTGTGGC+CGG + chr2.4:6759199-6759218 MS.gene31166:intron 50.0%
!!! ACCGGAGGAGCTGGTTTTAT+TGG + chr2.4:6759317-6759336 MS.gene31166:CDS 50.0%
CCATCGCGCAACTTGACCTT+TGG - chr2.4:6762491-6762510 None:intergenic 55.0%
CTATGATGAGGGCAAGCGTG+TGG + chr2.4:6761215-6761234 MS.gene31166:CDS 55.0%
CTTGGGCTTGCAAAGCGAGT+TGG + chr2.4:6760539-6760558 MS.gene31166:CDS 55.0%
GAAGATTGGAGAAGCAGGGC+AGG - chr2.4:6760086-6760105 None:intergenic 55.0%
GGCCTAATTCGCCTCATGGA+AGG + chr2.4:6761919-6761938 MS.gene31166:CDS 55.0%
TGGGAACCCCAAGCCTTAGA+CGG - chr2.4:6762538-6762557 None:intergenic 55.0%
! ACGTGTGTCGTTGTCGTGTC+GGG - chr2.4:6760222-6760241 None:intergenic 55.0%
! CACGTGTGTCGTTGTCGTGT+CGG - chr2.4:6760223-6760242 None:intergenic 55.0%
! CCAAAGGTCAAGTTGCGCGA+TGG + chr2.4:6762488-6762507 MS.gene31166:CDS 55.0%
!! ACCAGAGCATTGTTGTGGCC+GGG + chr2.4:6759200-6759219 MS.gene31166:intron 55.0%
!! ATTTTGGTGACCGGAGGAGC+TGG + chr2.4:6759308-6759327 MS.gene31166:CDS 55.0%
AGGCGAGAGAGGAAGCTCAC+AGG - chr2.4:6758979-6758998 None:intergenic 60.0%
CGCAATGGAGATGGCAAGGG+AGG - chr2.4:6758749-6758768 None:intergenic 60.0%
GAGAAGCAGGGCAGGCAAGA+TGG - chr2.4:6760078-6760097 None:intergenic 60.0%
GCGCGATGGCCTTCCTCTTA+TGG + chr2.4:6762502-6762521 MS.gene31166:CDS 60.0%
TCCCGGCCACAACAATGCTC+TGG - chr2.4:6759204-6759223 None:intergenic 60.0%
! CGTGTGTCGTTGTCGTGTCG+GGG - chr2.4:6760221-6760240 None:intergenic 60.0%
! TCGTGTCGGGGCGTCCGACA+TGG - chr2.4:6760209-6760228 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 6758683 6762568 6758683 ID=MS.gene31166
chr2.4 mRNA 6758683 6762568 6758683 ID=MS.gene31166.t1;Parent=MS.gene31166
chr2.4 exon 6758683 6758787 6758683 ID=MS.gene31166.t1.exon1;Parent=MS.gene31166.t1
chr2.4 CDS 6758683 6758787 6758683 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6759296 6759382 6759296 ID=MS.gene31166.t1.exon2;Parent=MS.gene31166.t1
chr2.4 CDS 6759296 6759382 6759296 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6759479 6759566 6759479 ID=MS.gene31166.t1.exon3;Parent=MS.gene31166.t1
chr2.4 CDS 6759479 6759566 6759479 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6760035 6760126 6760035 ID=MS.gene31166.t1.exon4;Parent=MS.gene31166.t1
chr2.4 CDS 6760035 6760126 6760035 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6760503 6760567 6760503 ID=MS.gene31166.t1.exon5;Parent=MS.gene31166.t1
chr2.4 CDS 6760503 6760567 6760503 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6760662 6760750 6760662 ID=MS.gene31166.t1.exon6;Parent=MS.gene31166.t1
chr2.4 CDS 6760662 6760750 6760662 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6761202 6761279 6761202 ID=MS.gene31166.t1.exon7;Parent=MS.gene31166.t1
chr2.4 CDS 6761202 6761279 6761202 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6761388 6761481 6761388 ID=MS.gene31166.t1.exon8;Parent=MS.gene31166.t1
chr2.4 CDS 6761388 6761481 6761388 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6761757 6761823 6761757 ID=MS.gene31166.t1.exon9;Parent=MS.gene31166.t1
chr2.4 CDS 6761757 6761823 6761757 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6761913 6761976 6761913 ID=MS.gene31166.t1.exon10;Parent=MS.gene31166.t1
chr2.4 CDS 6761913 6761976 6761913 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6762073 6762113 6762073 ID=MS.gene31166.t1.exon11;Parent=MS.gene31166.t1
chr2.4 CDS 6762073 6762113 6762073 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
chr2.4 exon 6762383 6762568 6762383 ID=MS.gene31166.t1.exon12;Parent=MS.gene31166.t1
chr2.4 CDS 6762383 6762568 6762383 ID=cds.MS.gene31166.t1;Parent=MS.gene31166.t1
Gene Sequence

>MS.gene31166

ATGGCTGCGAATTCGTCTAATGGAGATCAACATAATGGAGATCAACAGGCAACAACAAAGCAACCTCCCTTGCCATCTCCATTGCGATTTTCCAAATTCTTTCAGGTGAATTGCTGCATGGTTGCATTTATTCGTGCCGTTTTGTCATTTTGATTGTTTCTTGAATCATGTTTTGCCAAATTCGTGTCATTTTTATTGTGTTTGGTGCGTTGTTTTATTTTGACACTGATAATGTTGAATTTGATTCTGACATGTAAAGCATAAATTGTGCATCAGATGATTACTTAGTTGTGCCTGTGAGCTTCCTCTCTCGCCTTTAAGAATGGATCTTTAGTTTTTTTTTTTCCTGATCTGCCTATTGGTTTGTAATCATTGCATGCTATCATTTAGTAATTCAGGGAAGGGTATCAGATTTAACCCCAAAATGTGTTGGTGAATTATGTACTTTAGTGAGAGGATCCATTCACATGCATAAGACATAACGTTGTATTATCTCACAATTGAAAAGTTTGTGATTACCAGAGCATTGTTGTGGCCGGGATCATTCATTGTATTATTTATTTCTTATTCGTGGATTCTTAGTCATGGTTTTTTCATTTCATTCTTGAACCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTTTGCATGGCTTATTTCTTTCTGTGTATTTAGTATTCAAGTTTACTAGCTTTGACAAAGTTTCGGTACAACATAACACTATGTTTGTCTGCTCAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCATGGTATAATTTCTTCAGTTTTTCTATCACAATCATCTCCAGCCTGACTCTATTATTGCATATAAGATGAAATTTGAAATTGATGTTCAGATTTGTGTCATTTGGTTGTACGTTACTTCCTCTGGTCTCAAATATATGCAAAAATTGGTCAAAGAAAGTTGATGTATTTGGACCCAATACATCAACTTCTTTGACCAATTTTTTCTTGTAAGTATAAAGTATTTAGGGTGTTAAATATAGCTTGTTAGTGGTCTTAAAAACTATGAAGCATGCAACAGAAGCTTGTTGGTTATAAAATAAGATATTAAACTGACTACAAATCACTCACCATTGTAAATCAGCTGGCCCTTTGATATTGTACTTGTAGAACACTAATGATGATGCTTCTTCATGAGCACCAAAATTTGTGTTTCCCATTGTTTTTAATAAACTATGGACCTCAACATTCATTTCTGTTTTTTCCCCGAGTAGATGTGACAGAGACACTCTTGGTTGAGGTTGATCGGATCTACCATCTTGCCTGCCCTGCTTCTCCAATCTTCTACAAATACAATCCTGTAAAGGTAGGATATTTATAGTCTGTATACATGACCCTGTGAACTGTCTAAAAGGCTTTATTGCCTCTGTAGCACTGACACATTTCCATGTCGGACGCCCCGACACGACAACGACACACGTGATTACGTTCAACTAATTCATTTTTCAAATTTTTACCCGTGTCAATGTGTCTGTGTCGGTGTTTCATAGCTTATTTATTGCTTGCTACCAATTACAAAAGTATCTTACAGAACCCTTTCTTTGTCTCCCCCCCTTAAATTTATGTACGAATTTTATCATTATTATTATATCCGGTAACTCGGATTATGTGCATTTGTTGATTGATCTATCTGTCTAATGGACCTTTCAAATTATCTAACATTCAAAGGAATAACTTTACAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGTCGGCAATTGTTTCTTTTCTTCTCTATTTAAATATTTTGTCGATAATCAAACTGCTAGTGTCAGTTGGTTTTACCAAATCTTGATTTTCACAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTACTGGGGAAATGTCAATCCTATTGGTACATACTTATCCTCAATCCAAACGTGTTTTATGGCATGCAAACCGGATAGTCTAATTTAGTGGTTTATTTTTGGTTAACTGGTTAGGTGGATTTACATTATCATTTAGTTTTTATAATTTAAAGCAACGTGTCTTTTTTGTAAACATTTTTAATGGACAAACCATTTTTTCAGCTATGTACAATGCTAAACATTTGAATATACGTTCTCTTTGAATTATATTTTTAAAATAAGACCACCACATCCATATATTTCCAAACTGCAGTAAAGAGTGTTAATTTTTTTAGATATGTCATTTCTTTTGAAGTTTGTCTCTTGAATCTTGATGAGTGAGGCTTTTGCCACTTGCTTTGGGTTACTTTATATTAACAGTCCCCTCCAAACAAATGATTATGTTTTGCAACCCATGGCCTCAAAGATTTAGTGTAATTTAAGAATTTTTCACAACAGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGGTAATTTTATGCCATGTTTTCTTCACCAAACAAGTAACTCCTCATCGATAGAGGATATTGCCAATTCATTTTTTTTCATCTTTTGTTAACTGAATAATATTTTCACAGAAATACGCATTGCTAGAATCTTCAATACATATGGACCACGCATGAATATCGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCAATTCGGTAAGTCCTTAAATAATGTTTTGATCTGGTTGACTAAAATAATGTCTATGAGAAAACTACGTGACAGATGTACTGTTAACTCTTATGAAAAGAAAATATATACTGTAAACTCGGTCTTTATAAACAACAGATATATTTACTCGAATAGTTAGTTGTTTATCTGTTAAATTACGAGTCATTGATCTGAATACCTTGATTTAGTAGACTAGTCACAATTTCTTTTGCACTATTTTGAAACTGGATTCTTAACTGTTACTTGTTCTTGTGTGTTGCAGTGGTGAGCCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTATATATGAAGCGTTGCTCATCGTGTTTTGCTTTTATATTTGCACATCAATGCTGATCTATGGTTATTATATTTTTAATATGTATTAGGTTGATGGCCTAATTCGCCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTTTCTTTACAATACCAGTGATACTTATGTGCAGTGTACGCTTTTTTATTCTTCTGTTGTACTTGTTTGAATTGATTATTCATATTATTCTTTCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGGTCAGTTACAAACCATTTTAGTTCTTTTGGAATGTCAAATACGTCTCTTTATCTTAGTATTGTTATATTCCTGATGCTATATTTAAGCTTAAACCTCTGAATAATGGAAAACGCAACTCTTGAATACCAATGTATAGGTCTTATATTTTATGATGAATTGTATATTATATGCATTTTACTAACTACGTGTAACGTAACTTTGTGATTTAATAATAGAGATTTATGTGAATTATTTGAAGTTAGTTAATTGTTTGTGGATGATTTTGTAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGCGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTAAGGCTTGGGGTTCCCAGAAAGAACTAA
Protein sequence

>MS.gene31166.t1

MAANSSNGDQHNGDQQATTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN