AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30948

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30948.t1 MTR_2g096660 99.715 351 1 0 1 351 1 351 0.0 727
MS.gene30948.t1 MTR_4g063600 90.000 350 29 1 1 350 1 344 0.0 655
MS.gene30948.t1 MTR_4g063600 89.143 350 29 2 1 350 1 341 0.0 644
MS.gene30948.t1 MTR_4g120030 70.846 319 87 2 27 345 100 412 4.16e-163 462
MS.gene30948.t1 MTR_1g088480 71.704 311 82 2 35 345 115 419 3.08e-161 458
MS.gene30948.t1 MTR_1g067530 62.941 340 93 2 38 345 112 450 1.35e-148 427
MS.gene30948.t1 MTR_1g107455 30.659 349 188 12 38 334 19 365 2.41e-31 122
MS.gene30948.t1 MTR_4g056100 29.395 347 195 11 38 334 19 365 5.65e-31 121
MS.gene30948.t1 MTR_4g053420 28.613 346 196 11 38 334 14 357 8.25e-31 120
MS.gene30948.t1 MTR_7g115080 27.143 350 222 10 1 336 1 331 1.89e-28 114
MS.gene30948.t1 MTR_7g115080 27.299 348 220 10 1 334 14 342 2.14e-28 114
MS.gene30948.t1 MTR_7g115080 27.143 350 222 10 1 336 35 365 2.38e-28 114
MS.gene30948.t1 MTR_2g073240 30.892 314 188 10 40 334 21 324 2.79e-27 113
MS.gene30948.t1 MTR_1g108530 28.916 332 198 11 38 334 19 347 5.61e-27 110
MS.gene30948.t1 MTR_4g056100 30.420 286 162 9 38 286 19 304 1.15e-26 107
MS.gene30948.t1 MTR_0034s0060 29.936 314 191 10 40 334 139 442 1.20e-25 108
MS.gene30948.t1 MTR_1g080950 28.662 314 199 11 38 336 28 331 5.60e-25 104
MS.gene30948.t1 MTR_1g080950 28.662 314 199 11 38 336 64 367 7.55e-25 104
MS.gene30948.t1 MTR_1g009600 28.660 321 202 9 40 342 7 318 8.81e-25 105
MS.gene30948.t1 MTR_4g056100 29.502 261 151 7 38 265 19 279 2.47e-23 98.2
MS.gene30948.t1 MTR_4g129820 26.567 335 200 13 35 334 92 415 5.01e-19 88.2
MS.gene30948.t1 MTR_5g011940 26.667 330 204 12 36 334 88 410 7.41e-18 84.7
MS.gene30948.t1 MTR_2g032100 25.217 345 205 12 20 324 53 384 4.28e-17 82.4
MS.gene30948.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene30948.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene30948.t1 MTR_3g084090 25.758 330 199 13 40 334 101 419 2.82e-16 80.1
MS.gene30948.t1 MTR_4g024600 24.324 333 210 12 35 334 98 421 1.39e-14 74.7
MS.gene30948.t1 MTR_8g099535 26.970 330 203 13 36 332 2 326 1.59e-14 73.9
MS.gene30948.t1 MTR_4g102270 25.758 330 207 13 36 334 91 413 2.04e-14 74.3
MS.gene30948.t1 MTR_8g096880 24.620 329 206 13 35 327 3 325 5.18e-13 69.7
MS.gene30948.t1 MTR_5g009160 26.061 330 206 13 36 332 2 326 1.07e-12 68.6
MS.gene30948.t1 MTR_8g096880 24.465 327 205 13 35 325 3 323 1.44e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30948.t1 AT5G59290 90.476 336 32 0 14 349 21 356 0.0 629
MS.gene30948.t1 AT2G28760 86.857 350 39 1 1 350 32 374 0.0 629
MS.gene30948.t1 AT5G59290 90.476 336 32 0 14 349 6 341 0.0 628
MS.gene30948.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene30948.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene30948.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene30948.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene30948.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene30948.t1 AT5G59290 92.332 313 24 0 37 349 22 334 0.0 609
MS.gene30948.t1 AT5G59290 92.308 312 24 0 38 349 1 312 0.0 608
MS.gene30948.t1 AT2G47650 73.377 308 81 1 38 345 121 427 2.80e-165 469
MS.gene30948.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene30948.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene30948.t1 AT2G47650 71.975 314 81 2 38 345 121 433 7.18e-163 463
MS.gene30948.t1 AT3G53520 71.061 311 89 1 35 345 117 426 7.76e-163 462
MS.gene30948.t1 AT3G53520 70.740 311 88 2 35 345 117 424 5.14e-160 455
MS.gene30948.t1 AT3G53520 64.583 336 91 3 35 345 117 449 1.64e-152 437
MS.gene30948.t1 AT3G53520 75.225 222 54 1 35 256 117 337 6.00e-119 348
MS.gene30948.t1 AT1G08200 30.836 347 190 12 38 334 18 364 2.50e-33 127
MS.gene30948.t1 AT2G27860 30.548 347 191 12 38 334 18 364 3.50e-32 124
MS.gene30948.t1 AT1G53500 30.032 313 192 9 40 334 11 314 4.79e-28 115
MS.gene30948.t1 AT1G78570 30.032 313 192 9 40 334 9 312 3.39e-27 113
MS.gene30948.t1 AT3G14790 30.032 313 192 9 40 334 9 312 9.30e-27 111
MS.gene30948.t1 AT3G14790 30.032 313 192 9 40 334 12 315 1.01e-26 111
MS.gene30948.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene30948.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene30948.t1 AT2G28755 70.175 57 17 0 254 310 4 60 4.80e-21 85.9
MS.gene30948.t1 AT4G20460 25.294 340 213 10 22 327 54 386 2.86e-19 88.6
MS.gene30948.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene30948.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene30948.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene30948.t1 AT5G44480 25.723 346 203 12 30 334 87 419 5.11e-19 88.2
MS.gene30948.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene30948.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene30948.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene30948.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene30948.t1 AT1G30620 25.731 342 213 10 20 327 52 386 4.25e-17 82.4
MS.gene30948.t1 AT2G45310 24.566 346 215 12 24 334 83 417 1.15e-16 81.3
MS.gene30948.t1 AT4G00110 24.545 330 203 12 40 334 93 411 6.47e-15 75.9
MS.gene30948.t1 AT1G73250 24.684 316 210 7 31 334 10 309 2.75e-14 73.2
MS.gene30948.t1 AT4G12250 25.301 332 208 13 35 334 93 416 1.09e-13 72.0
MS.gene30948.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene30948.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene30948.t1 AT1G17890 23.511 319 210 10 31 334 13 312 1.67e-11 65.1

Find 94 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTATTTAGTTCTTTC+TGG 0.093558 2.2:-5431937 None:intergenic
GCAATTCACCTGAAAGAATT+TGG 0.163974 2.2:-5428127 None:intergenic
ACATTTCCCCAATAAGTTTC+TGG 0.179736 2.2:-5430086 None:intergenic
TATAAATATCCTACCTTTAC+AGG 0.215426 2.2:-5429482 None:intergenic
ATCCACAACCAGAAACTTAT+TGG 0.241528 2.2:+5430078 MS.gene30948:CDS
GCGCGATGGCCTTCCTCTTA+TGG 0.270618 2.2:+5431884 MS.gene30948:CDS
ACAATAAAGACTAATGTAAT+TGG 0.274753 2.2:+5429875 MS.gene30948:CDS
CCAGTCCAATATGAGAATTT+TGG 0.274767 2.2:+5428656 MS.gene30948:intron
TTTAATATGTATTAGGTTGA+TGG 0.307326 2.2:+5431279 MS.gene30948:intron
CCTGGAAGTTGGACTGTTAA+GGG 0.329431 2.2:-5431145 None:intergenic
AAACTGCGAGTTTGTGTTCC+TGG 0.333294 2.2:-5431163 None:intergenic
TCACCTTGTTGACAGATTGA+TGG 0.336356 2.2:+5428707 MS.gene30948:CDS
TCCTGGAAGTTGGACTGTTA+AGG 0.339907 2.2:-5431146 None:intergenic
CTCCTTCCATGAGGCGAATT+AGG 0.346004 2.2:-5431302 None:intergenic
TGGAAGAGGATTTCCGTCTA+AGG 0.354083 2.2:+5431904 MS.gene30948:CDS
TCCACAACCAGAAACTTATT+GGG 0.354322 2.2:+5430079 MS.gene30948:CDS
GGATTGTATTTGTAGAAGAT+TGG 0.356058 2.2:-5429461 None:intergenic
AGGATTTCCGTCTAAGGCTT+GGG 0.356905 2.2:+5431910 MS.gene30948:CDS
CCCTTAACAGTCCAACTTCC+AGG 0.358179 2.2:+5431145 MS.gene30948:CDS
CCCCAATAAGTTTCTGGTTG+TGG 0.359244 2.2:-5430080 None:intergenic
CCATCGCGCAACTTGACCTT+TGG 0.359997 2.2:-5431870 None:intergenic
TTTCTTTGCCGAGGATCATC+AGG 0.362452 2.2:-5431807 None:intergenic
TGGGGAAATGTCAATCCTAT+TGG 0.373968 2.2:+5430098 MS.gene30948:CDS
AACTTTATTTAGTTCTTTCT+GGG 0.379408 2.2:-5431936 None:intergenic
CCTGGGTTCCCAATGTTGAT+TGG 0.380574 2.2:-5431336 None:intergenic
TATCATAGGCAGCATGGATT+AGG 0.389706 2.2:+5430636 MS.gene30948:CDS
ACATCTACTTCAGAAGTATA+TGG 0.391713 2.2:+5430041 MS.gene30948:CDS
GGTCACCAAAATTCTCATAT+TGG 0.401935 2.2:-5428661 None:intergenic
TCAAATGGAGATCAACATAA+TGG 0.401989 2.2:+5428051 MS.gene30948:CDS
CTTTGATGTTTGATTATCAT+AGG 0.405550 2.2:+5430622 MS.gene30948:CDS
TCTGGTTGTGGATGGATAAG+AGG 0.414750 2.2:-5430068 None:intergenic
CGGAAATCCTCTTCCATAAG+AGG 0.416548 2.2:-5431897 None:intergenic
GCTAGAATCTTCAACACATA+TGG 0.419857 2.2:+5430780 MS.gene30948:CDS
TTGGAACACTGAACATGCTT+GGG 0.433117 2.2:+5429894 MS.gene30948:CDS
ACCAATAAAACCAGCTCCTC+CGG 0.437691 2.2:-5428682 None:intergenic
GAGGATTTCCGTCTAAGGCT+TGG 0.451269 2.2:+5431909 MS.gene30948:CDS
ACTTTATTGCTCAAGCAATT+CGG 0.455967 2.2:+5430841 MS.gene30948:CDS
CACTGTTGGTTGAGGTTGAT+CGG 0.459878 2.2:+5429411 MS.gene30948:CDS
GTAGCTGATAATTACTTCAC+TGG 0.462377 2.2:+5428849 MS.gene30948:CDS
ACCATCTTTATCTCCACAGC+TGG 0.464169 2.2:-5431774 None:intergenic
TTGTAGAAGATTGGAGAAGC+AGG 0.479045 2.2:-5429452 None:intergenic
GAGAAGCAGGGCAGGCAAGA+TGG 0.485305 2.2:-5429439 None:intergenic
GAAGATTGGAGAAGCAGGGC+AGG 0.487084 2.2:-5429447 None:intergenic
CTTGGGCTTGCAAAGCGAGT+TGG 0.491265 2.2:+5429911 MS.gene30948:CDS
AAGCAACAGAATTGCTTGGA+TGG 0.498380 2.2:+5431844 MS.gene30948:CDS
CCACGCATGAATATCGATGA+TGG 0.501885 2.2:+5430804 MS.gene30948:CDS
TGGCCTTCCTCTTATGGAAG+AGG 0.511492 2.2:+5431890 MS.gene30948:CDS
ATGGCGTCGAATTCATCAAA+TGG 0.515385 2.2:+5428036 MS.gene30948:CDS
ATTGGAACACTGAACATGCT+TGG 0.517074 2.2:+5429893 MS.gene30948:CDS
ACACTGGTCCAATCAACATT+GGG 0.518433 2.2:+5431328 MS.gene30948:CDS
AATAAGTTTCTGGTTGTGGA+TGG 0.522152 2.2:-5430076 None:intergenic
CTACAAATACAATCCTGTAA+AGG 0.522717 2.2:+5429469 MS.gene30948:CDS
TTGGAAAATCGCAACGGAGA+TGG 0.523155 2.2:-5428108 None:intergenic
AAAATCGCAACGGAGATGGC+AGG 0.524114 2.2:-5428104 None:intergenic
ACAAAAGCAACAGAATTGCT+TGG 0.526474 2.2:+5431840 MS.gene30948:CDS
AGCAACAGAATTGCTTGGAT+GGG 0.536467 2.2:+5431845 MS.gene30948:CDS
CGCAACGGAGATGGCAGGGG+AGG 0.538853 2.2:-5428099 None:intergenic
AACACTGGTCCAATCAACAT+TGG 0.539937 2.2:+5431327 MS.gene30948:CDS
TGATGGCCTAATTCGCCTCA+TGG 0.540095 2.2:+5431296 MS.gene30948:CDS
CTGGTTGTGGATGGATAAGA+GGG 0.540478 2.2:-5430067 None:intergenic
TGTAGAAGATTGGAGAAGCA+GGG 0.544155 2.2:-5429451 None:intergenic
GAGTTTGTGTTCCTGGAAGT+TGG 0.549267 2.2:-5431156 None:intergenic
AATCGCAACGGAGATGGCAG+GGG 0.551999 2.2:-5428102 None:intergenic
GGCCTAATTCGCCTCATGGA+AGG 0.552535 2.2:+5431300 MS.gene30948:CDS
TTTGATTATCATAGGCAGCA+TGG 0.553866 2.2:+5430630 MS.gene30948:CDS
AAATCGCAACGGAGATGGCA+GGG 0.556402 2.2:-5428103 None:intergenic
TTCTTTGCCGAGGATCATCA+GGG 0.558934 2.2:-5431806 None:intergenic
TGGGAACCCCAAGCCTTAGA+CGG 0.568610 2.2:-5431917 None:intergenic
GGATTTCCGTCTAAGGCTTG+GGG 0.572674 2.2:+5431911 MS.gene30948:CDS
CCAATCAACATTGGGAACCC+AGG 0.578663 2.2:+5431336 MS.gene30948:CDS
CACGCATGAATATCGATGAT+GGG 0.584892 2.2:+5430805 MS.gene30948:CDS
GACAGAGACACTGTTGGTTG+AGG 0.589326 2.2:+5429403 MS.gene30948:CDS
AGTTCGGAGTTGCTATGATG+AGG 0.589902 2.2:+5430581 MS.gene30948:CDS
TTGCAAAGCGAGTTGGAGCA+AGG 0.600057 2.2:+5429918 MS.gene30948:CDS
TCCAGCTGTGGAGATAAAGA+TGG 0.604901 2.2:+5431773 MS.gene30948:CDS
GTTCGGAGTTGCTATGATGA+GGG 0.608208 2.2:+5430582 MS.gene30948:CDS
AGAACACCCCTGATGATCCT+CGG 0.608361 2.2:+5431799 MS.gene30948:CDS
CCAAAGGTCAAGTTGCGCGA+TGG 0.618122 2.2:+5431870 MS.gene30948:CDS
TGACGAATTAGCTCAAATCT+CGG 0.620678 2.2:-5428906 None:intergenic
GCAGCTTATTAATCCAGCTG+TGG 0.624211 2.2:+5431761 MS.gene30948:intron
AATCCTCTTCCATAAGAGGA+AGG 0.634078 2.2:-5431893 None:intergenic
TTTCCATCAATCTGTCAACA+AGG 0.639034 2.2:-5428710 None:intergenic
ATTGCTTGGATGGGAACCAA+AGG 0.642197 2.2:+5431854 MS.gene30948:CDS
TTTCTGCTATGTCTCTGACA+TGG 0.642724 2.2:+5431183 MS.gene30948:CDS
TGAACTTGCTGAGAATGTGA+AGG 0.652182 2.2:+5431471 MS.gene30948:CDS
AGATTTGAGCTAATTCGTCA+CGG 0.665442 2.2:+5428909 MS.gene30948:CDS
AAGAATTTGGAAAATCGCAA+CGG 0.666135 2.2:-5428114 None:intergenic
CTATGATGAGGGCAAGCGTG+TGG 0.675259 2.2:+5430593 MS.gene30948:CDS
CCATCATCGATATTCATGCG+TGG 0.676212 2.2:-5430804 None:intergenic
CCACAACCAGAAACTTATTG+GGG 0.681738 2.2:+5430080 MS.gene30948:CDS
ACTTGCTGAGAATGTGAAGG+AGG 0.688062 2.2:+5431474 MS.gene30948:CDS
TCTTTGCCGAGGATCATCAG+GGG 0.694879 2.2:-5431805 None:intergenic
CTCATGGAAGGAGAAAACAC+TGG 0.733060 2.2:+5431312 MS.gene30948:CDS
AGATGTGACAGAGACACTGT+TGG 0.774861 2.2:+5429397 MS.gene30948:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATTATTATTATTATATC+CGG + chr2.2:5429765-5429784 MS.gene30948:intron 10.0%
!! GATGAAAAAAAAAAAAAAAT+TGG - chr2.2:5430721-5430740 None:intergenic 10.0%
!! TATAGTTTATTAAAAACAAT+GGG - chr2.2:5429343-5429362 None:intergenic 10.0%
!! TTATACTTATAAGAAAAAAT+TGG - chr2.2:5429125-5429144 None:intergenic 10.0%
!! AAAATTCGTACATAAATTTA+AGG - chr2.2:5429745-5429764 None:intergenic 15.0%
!! AAATTCGTACATAAATTTAA+GGG - chr2.2:5429744-5429763 None:intergenic 15.0%
!! ATTATTTGTATTATTCTTTC+AGG + chr2.2:5431433-5431452 MS.gene30948:intron 15.0%
!! CTATAGTTTATTAAAAACAA+TGG - chr2.2:5429344-5429363 None:intergenic 15.0%
!!! CTTATAAGTATAAAGTATTT+GGG + chr2.2:5429132-5429151 MS.gene30948:intron 15.0%
!!! TATTAGTTATTTCTTATTCA+TGG + chr2.2:5428598-5428617 MS.gene30948:intron 15.0%
!!! TCTTATAAGTATAAAGTATT+TGG + chr2.2:5429131-5429150 MS.gene30948:intron 15.0%
!!! TTATAAGTATAAAGTATTTG+GGG + chr2.2:5429133-5429152 MS.gene30948:intron 15.0%
!!! TTCATTTTTCAAATTTTTAC+CGG + chr2.2:5429622-5429641 MS.gene30948:intron 15.0%
!!! TTTTTCGAAAATGTTTTTAA+TGG + chr2.2:5430259-5430278 MS.gene30948:intron 15.0%
!! AAAATATAAGACCTATACAT+TGG - chr2.2:5431625-5431644 None:intergenic 20.0%
!! AAACAATCAAAATGACAAAA+CGG - chr2.2:5428175-5428194 None:intergenic 20.0%
!! AATAAGATGTTATGTCTTAT+TGG - chr2.2:5428518-5428537 None:intergenic 20.0%
!! AATTCGTACATAAATTTAAG+GGG - chr2.2:5429743-5429762 None:intergenic 20.0%
!! ACAATAAAGACTAATGTAAT+TGG + chr2.2:5429875-5429894 MS.gene30948:CDS 20.0%
!! GAAAATATATACTGTAAACT+TGG + chr2.2:5430954-5430973 MS.gene30948:intron 20.0%
!! TCAAATTATCTAACATTCAA+AGG + chr2.2:5429839-5429858 MS.gene30948:intron 20.0%
!! TGAATGTTAGATAATTTGAA+AGG - chr2.2:5429838-5429857 None:intergenic 20.0%
!!! AAATTACACTAAATCTTTTG+AGG - chr2.2:5430542-5430561 None:intergenic 20.0%
!!! ATAATCTTTTTTGTTTGAAG+AGG - chr2.2:5430503-5430522 None:intergenic 20.0%
!!! ATTTAAGAATTTTTCACAAC+AGG + chr2.2:5430558-5430577 MS.gene30948:intron 20.0%
!!! CTAATTTAGTGGTTTATTTT+TGG + chr2.2:5430177-5430196 MS.gene30948:intron 20.0%
!!! TTTAATATGTATTAGGTTGA+TGG + chr2.2:5431279-5431298 MS.gene30948:intron 20.0%
! AAAAACAGAAATGAATGTTG+AGG - chr2.2:5429368-5429387 None:intergenic 25.0%
! ACATTCCAAAAGAACTAAAA+TGG - chr2.2:5431511-5431530 None:intergenic 25.0%
! ATGCTATCATTTAGTAATTC+AGG + chr2.2:5428432-5428451 MS.gene30948:intron 25.0%
! ATTCGTACATAAATTTAAGG+GGG - chr2.2:5429742-5429761 None:intergenic 25.0%
! CAATAAAAACGACACATATT+TGG - chr2.2:5428214-5428233 None:intergenic 25.0%
! CCAGATCAAAACAATATTTA+AGG - chr2.2:5430872-5430891 None:intergenic 25.0%
! CTTTGATGTTTGATTATCAT+AGG + chr2.2:5430622-5430641 MS.gene30948:CDS 25.0%
! GTAAAGACAACCTTAAAAAA+TGG + chr2.2:5428874-5428893 MS.gene30948:CDS 25.0%
! TAAAATTCTTTGCTACAGTT+TGG - chr2.2:5430382-5430401 None:intergenic 25.0%
! TATAAATATCCTACCTTTAC+AGG - chr2.2:5429485-5429504 None:intergenic 25.0%
! TCAAAGAAAGTTGTTGTATT+TGG + chr2.2:5429076-5429095 MS.gene30948:intron 25.0%
! TCTCAAATATATGCAAAAAC+TGG + chr2.2:5429053-5429072 MS.gene30948:intron 25.0%
! TGCTATCATTTAGTAATTCA+GGG + chr2.2:5428433-5428452 MS.gene30948:intron 25.0%
! TGTACAAGTACAATATCAAA+GGG - chr2.2:5429276-5429295 None:intergenic 25.0%
! TTAAGCTTAAATATAGCAAC+AGG - chr2.2:5431568-5431587 None:intergenic 25.0%
! TTATATGCAATAATAGAGTC+AGG - chr2.2:5428973-5428992 None:intergenic 25.0%
! TTGTACAAGTACAATATCAA+AGG - chr2.2:5429277-5429296 None:intergenic 25.0%
!! ATGTTAAGATTTGTGTCATT+TGG + chr2.2:5429010-5429029 MS.gene30948:intron 25.0%
!! GATACTTTTGTAAATGTTGT+AGG - chr2.2:5429696-5429715 None:intergenic 25.0%
!!! ACAAACCATTTTAGTTCTTT+TGG + chr2.2:5431503-5431522 MS.gene30948:intron 25.0%
!!! CCTTAAATATTGTTTTGATC+TGG + chr2.2:5430869-5430888 MS.gene30948:intron 25.0%
!!! GTGGTTTATTTTTGGTTAAT+TGG + chr2.2:5430185-5430204 MS.gene30948:intron 25.0%
!!! TGTTAAATATAGCTTGTTAG+TGG + chr2.2:5429156-5429175 MS.gene30948:intron 25.0%
!!! TTTTTGGTTAATTGGTTAAG+TGG + chr2.2:5430193-5430212 MS.gene30948:intron 25.0%
AAATACAATCCTGTAAAGGT+AGG + chr2.2:5429473-5429492 MS.gene30948:intron 30.0%
AACCACTAAATTAGACTATC+CGG - chr2.2:5430171-5430190 None:intergenic 30.0%
AACTAAAGATCCGTTCTTAA+AGG - chr2.2:5428369-5428388 None:intergenic 30.0%
AAGAATTTGGAAAATCGCAA+CGG - chr2.2:5428117-5428136 None:intergenic 30.0%
AAGCTTAAACCTCTGAATAA+TGG + chr2.2:5431580-5431599 MS.gene30948:intron 30.0%
AAGTAAATCCTCATTGATAG+AGG + chr2.2:5430689-5430708 MS.gene30948:intron 30.0%
ACTAATACAATGAATGATCC+CGG - chr2.2:5428585-5428604 None:intergenic 30.0%
ACTCTTGAATACCAATGTAT+AGG + chr2.2:5431611-5431630 MS.gene30948:intron 30.0%
ACTTTATTGCTCAAGCAATT+CGG + chr2.2:5430841-5430860 MS.gene30948:CDS 30.0%
AGTTTGGAAATATATGGATG+TGG - chr2.2:5430366-5430385 None:intergenic 30.0%
ATAAAATAACCCAAAGCAAG+TGG - chr2.2:5430471-5430490 None:intergenic 30.0%
ATAATTCACCAACACATTTC+GGG - chr2.2:5428477-5428496 None:intergenic 30.0%
ATCATTTAGTAATTCAGGGA+AGG + chr2.2:5428437-5428456 MS.gene30948:intron 30.0%
ATCCTGTGAAAATCAAGATT+TGG - chr2.2:5430014-5430033 None:intergenic 30.0%
ATGTACATAATCTGAGTTAC+CGG - chr2.2:5429787-5429806 None:intergenic 30.0%
CATAATTCACCAACACATTT+CGG - chr2.2:5428478-5428497 None:intergenic 30.0%
CTACAAATACAATCCTGTAA+AGG + chr2.2:5429469-5429488 MS.gene30948:CDS 30.0%
GAATTATGTACTTTAGTGAG+AGG + chr2.2:5428490-5428509 MS.gene30948:intron 30.0%
GACAACCTTAAAAAATGGAT+TGG + chr2.2:5428879-5428898 MS.gene30948:CDS 30.0%
GGATTGTATTTGTAGAAGAT+TGG - chr2.2:5429464-5429483 None:intergenic 30.0%
TATTCATGGATTCTTAGTCA+TGG + chr2.2:5428612-5428631 MS.gene30948:intron 30.0%
TCAAATGGAGATCAACATAA+TGG + chr2.2:5428051-5428070 MS.gene30948:CDS 30.0%
TCAATGAGGATTTACTTGTT+TGG - chr2.2:5430686-5430705 None:intergenic 30.0%
TCATTTAGTAATTCAGGGAA+GGG + chr2.2:5428438-5428457 MS.gene30948:intron 30.0%
TGATTGATCTATCTGTGTAA+TGG + chr2.2:5429811-5429830 MS.gene30948:intron 30.0%
TGCAATGATTACAAACCAAT+AGG - chr2.2:5428413-5428432 None:intergenic 30.0%
TGCTACAGTTTGGAAATATA+TGG - chr2.2:5430372-5430391 None:intergenic 30.0%
TTCGTACATAAATTTAAGGG+GGG - chr2.2:5429741-5429760 None:intergenic 30.0%
TTGGTATTGTAAAGAAACCT+GGG - chr2.2:5431356-5431375 None:intergenic 30.0%
TTTGTACGTAGCTGAAAAAA+TGG - chr2.2:5430290-5430309 None:intergenic 30.0%
! AATCCAAACTTGTGTTTCTA+TGG + chr2.2:5430136-5430155 MS.gene30948:intron 30.0%
! AATTTTTCACAACAGGAGTT+CGG + chr2.2:5430565-5430584 MS.gene30948:intron 30.0%
! ACAATGGGAAACACAAATTT+TGG - chr2.2:5429328-5429347 None:intergenic 30.0%
! ACATCTACTTCAGAAGTATA+TGG + chr2.2:5430041-5430060 MS.gene30948:CDS 30.0%
! TACCAAATCTTGATTTTCAC+AGG + chr2.2:5430009-5430028 MS.gene30948:intron 30.0%
!! AATATGAGAATTTTGGTGAC+CGG + chr2.2:5428663-5428682 MS.gene30948:CDS 30.0%
!! TACTAGCTTTGACAAAGTTT+CGG + chr2.2:5428790-5428809 MS.gene30948:intron 30.0%
!!! CTTTTGCACTATTTTGAAAC+TGG + chr2.2:5431081-5431100 MS.gene30948:intron 30.0%
!!! GATGACCAATCCATTTTTTA+AGG - chr2.2:5428887-5428906 None:intergenic 30.0%
!!! TGTCGTTTTTATTGTGTGTT+TGG + chr2.2:5428220-5428239 MS.gene30948:intron 30.0%
AACCGGATAGTCTAATTTAG+TGG + chr2.2:5430166-5430185 MS.gene30948:intron 35.0%
ACAAAAGCAACAGAATTGCT+TGG + chr2.2:5431840-5431859 MS.gene30948:CDS 35.0%
ACATTTCCCCAATAAGTTTC+TGG - chr2.2:5430089-5430108 None:intergenic 35.0%
AGAAACACAAGTTTGGATTG+AGG - chr2.2:5430135-5430154 None:intergenic 35.0%
AGATTTGAGCTAATTCGTCA+CGG + chr2.2:5428909-5428928 MS.gene30948:CDS 35.0%
ATCCACAACCAGAAACTTAT+TGG + chr2.2:5430078-5430097 MS.gene30948:CDS 35.0%
ATGCCATAGAAACACAAGTT+TGG - chr2.2:5430142-5430161 None:intergenic 35.0%
CCAAAATTCTCATATTGGAC+TGG - chr2.2:5428659-5428678 None:intergenic 35.0%
CTAAATTAGACTATCCGGTT+TGG - chr2.2:5430166-5430185 None:intergenic 35.0%
CTTGGTATTGTAAAGAAACC+TGG - chr2.2:5431357-5431376 None:intergenic 35.0%
GAGGATAAGTATGTACCAAT+AGG - chr2.2:5430116-5430135 None:intergenic 35.0%
GATGGAAAATGAGAAAAACG+AGG + chr2.2:5428725-5428744 MS.gene30948:CDS 35.0%
GCAATTCACCTGAAAGAATT+TGG - chr2.2:5428130-5428149 None:intergenic 35.0%
GCTAGAATCTTCAACACATA+TGG + chr2.2:5430780-5430799 MS.gene30948:CDS 35.0%
GGTCACCAAAATTCTCATAT+TGG - chr2.2:5428664-5428683 None:intergenic 35.0%
GTAGCTGATAATTACTTCAC+TGG + chr2.2:5428849-5428868 MS.gene30948:CDS 35.0%
TAATTCACCAACACATTTCG+GGG - chr2.2:5428476-5428495 None:intergenic 35.0%
TCCACAACCAGAAACTTATT+GGG + chr2.2:5430079-5430098 MS.gene30948:CDS 35.0%
TGACGAATTAGCTCAAATCT+CGG - chr2.2:5428909-5428928 None:intergenic 35.0%
TGACGTTAGTTAATCGTTTG+TGG + chr2.2:5431730-5431749 MS.gene30948:intron 35.0%
TTGGAAATATATGGATGTGG+TGG - chr2.2:5430363-5430382 None:intergenic 35.0%
TTTCCATCAATCTGTCAACA+AGG - chr2.2:5428713-5428732 None:intergenic 35.0%
TTTGATTATCATAGGCAGCA+TGG + chr2.2:5430630-5430649 MS.gene30948:CDS 35.0%
! AGATTATGTTTTGCAACCCA+TGG + chr2.2:5430516-5430535 MS.gene30948:intron 35.0%
! CCAGTCCAATATGAGAATTT+TGG + chr2.2:5428656-5428675 MS.gene30948:intron 35.0%
! CTTGTTTGGTGAAGAAAACA+TGG - chr2.2:5430672-5430691 None:intergenic 35.0%
! GCGATTTTCCAAATTCTTTC+AGG + chr2.2:5428119-5428138 MS.gene30948:CDS 35.0%
! TTGCATATATTTGAGACCAG+CGG - chr2.2:5429049-5429068 None:intergenic 35.0%
! TTGCGTTTTCCATTATTCAG+AGG - chr2.2:5431592-5431611 None:intergenic 35.0%
!! AATAAGTTTCTGGTTGTGGA+TGG - chr2.2:5430079-5430098 None:intergenic 35.0%
!! GTGACTAGTCTACTAAATCA+AGG - chr2.2:5431056-5431075 None:intergenic 35.0%
!!! ACTAAATCTTTTGAGGCCAT+GGG - chr2.2:5430535-5430554 None:intergenic 35.0%
!!! TCTGTTGCTTTTGTTATGTC+TGG - chr2.2:5431834-5431853 None:intergenic 35.0%
AACACTATGTTTGTCTGCTC+AGG + chr2.2:5428821-5428840 MS.gene30948:intron 40.0%
AACACTGGTCCAATCAACAT+TGG + chr2.2:5431327-5431346 MS.gene30948:CDS 40.0%
AAGCAACAGAATTGCTTGGA+TGG + chr2.2:5431844-5431863 MS.gene30948:CDS 40.0%
AATCCTCTTCCATAAGAGGA+AGG - chr2.2:5431896-5431915 None:intergenic 40.0%
ACACTGGTCCAATCAACATT+GGG + chr2.2:5431328-5431347 MS.gene30948:CDS 40.0%
ACTCACCATTGTAAATCAGC+TGG + chr2.2:5429250-5429269 MS.gene30948:intron 40.0%
AGCAACAGAATTGCTTGGAT+GGG + chr2.2:5431845-5431864 MS.gene30948:CDS 40.0%
ATCAAACTGCTAGTGTCAGT+TGG + chr2.2:5429983-5430002 MS.gene30948:intron 40.0%
ATGAGAAAAACGAGGTTTGC+AGG + chr2.2:5428733-5428752 MS.gene30948:intron 40.0%
ATGCAATAATAGAGTCAGGC+TGG - chr2.2:5428969-5428988 None:intergenic 40.0%
ATTGGAACACTGAACATGCT+TGG + chr2.2:5429893-5429912 MS.gene30948:CDS 40.0%
CACGCATGAATATCGATGAT+GGG + chr2.2:5430805-5430824 MS.gene30948:CDS 40.0%
CACTGCACATAAGTATCACT+TGG - chr2.2:5431375-5431394 None:intergenic 40.0%
CCACAACCAGAAACTTATTG+GGG + chr2.2:5430080-5430099 MS.gene30948:CDS 40.0%
CTCTTGAATCTCGATGATTG+AGG + chr2.2:5430439-5430458 MS.gene30948:intron 40.0%
GATTTAACCCCGAAATGTGT+TGG + chr2.2:5428466-5428485 MS.gene30948:intron 40.0%
GGCAATATCCTCTATCAATG+AGG - chr2.2:5430700-5430719 None:intergenic 40.0%
GTTTCTATGGCATTCCAAAC+CGG + chr2.2:5430149-5430168 MS.gene30948:intron 40.0%
TACAAACCAATAGGCAGATC+AGG - chr2.2:5428404-5428423 None:intergenic 40.0%
TATCATAGGCAGCATGGATT+AGG + chr2.2:5430636-5430655 MS.gene30948:CDS 40.0%
TCACCTTGTTGACAGATTGA+TGG + chr2.2:5428707-5428726 MS.gene30948:CDS 40.0%
TGAGAAAAACGAGGTTTGCA+GGG + chr2.2:5428734-5428753 MS.gene30948:intron 40.0%
TGCACATCAATGCTGATCTA+TGG + chr2.2:5431246-5431265 MS.gene30948:intron 40.0%
TGGGGAAATGTCAATCCTAT+TGG + chr2.2:5430098-5430117 MS.gene30948:CDS 40.0%
TGTAGAAGATTGGAGAAGCA+GGG - chr2.2:5429454-5429473 None:intergenic 40.0%
TTCTTTCCTGATCTGCCTAT+TGG + chr2.2:5428395-5428414 MS.gene30948:intron 40.0%
TTGGAACACTGAACATGCTT+GGG + chr2.2:5429894-5429913 MS.gene30948:CDS 40.0%
TTGTAGAAGATTGGAGAAGC+AGG - chr2.2:5429455-5429474 None:intergenic 40.0%
TTTCTGCTATGTCTCTGACA+TGG + chr2.2:5431183-5431202 MS.gene30948:CDS 40.0%
! AAGCCTTTTAGACAGTTCAC+AGG - chr2.2:5429523-5429542 None:intergenic 40.0%
! AGCCTTTTAGACAGTTCACA+GGG - chr2.2:5429522-5429541 None:intergenic 40.0%
! ATGGCGTCGAATTCATCAAA+TGG + chr2.2:5428036-5428055 MS.gene30948:CDS 40.0%
! TCCTCTTTCGCCTTTAAGAA+CGG + chr2.2:5428356-5428375 MS.gene30948:intron 40.0%
!! TCTCATATTGGACTGGTTCA+AGG - chr2.2:5428652-5428671 None:intergenic 40.0%
!! TGAACTTGCTGAGAATGTGA+AGG + chr2.2:5431471-5431490 MS.gene30948:CDS 40.0%
!!! CACTAAATCTTTTGAGGCCA+TGG - chr2.2:5430536-5430555 None:intergenic 40.0%
AAACTGCGAGTTTGTGTTCC+TGG - chr2.2:5431166-5431185 None:intergenic 45.0%
ACCAATAAAACCAGCTCCTC+CGG - chr2.2:5428685-5428704 None:intergenic 45.0%
ACCATCTTTATCTCCACAGC+TGG - chr2.2:5431777-5431796 None:intergenic 45.0%
AGATGTGACAGAGACACTGT+TGG + chr2.2:5429397-5429416 MS.gene30948:intron 45.0%
AGCATGCAACAGAAGCTTGT+TGG + chr2.2:5429194-5429213 MS.gene30948:intron 45.0%
AGTTCGGAGTTGCTATGATG+AGG + chr2.2:5430581-5430600 MS.gene30948:CDS 45.0%
ATTGCTTGGATGGGAACCAA+AGG + chr2.2:5431854-5431873 MS.gene30948:CDS 45.0%
CACTGACACATTTCCATGTC+GGG + chr2.2:5429557-5429576 MS.gene30948:intron 45.0%
CCACGCATGAATATCGATGA+TGG + chr2.2:5430804-5430823 MS.gene30948:CDS 45.0%
CCATCATCGATATTCATGCG+TGG - chr2.2:5430807-5430826 None:intergenic 45.0%
CCTGGAAGTTGGACTGTTAA+GGG - chr2.2:5431148-5431167 None:intergenic 45.0%
CGGAAATCCTCTTCCATAAG+AGG - chr2.2:5431900-5431919 None:intergenic 45.0%
CTCATGGAAGGAGAAAACAC+TGG + chr2.2:5431312-5431331 MS.gene30948:CDS 45.0%
CTGGTTGTGGATGGATAAGA+GGG - chr2.2:5430070-5430089 None:intergenic 45.0%
GAAATGTGTCAGTGCTACAG+AGG - chr2.2:5429551-5429570 None:intergenic 45.0%
GACCCTGTGAACTGTCTAAA+AGG + chr2.2:5429517-5429536 MS.gene30948:intron 45.0%
GAGTTTGTGTTCCTGGAAGT+TGG - chr2.2:5431159-5431178 None:intergenic 45.0%
GCAGCTTATTAATCCAGCTG+TGG + chr2.2:5431761-5431780 MS.gene30948:intron 45.0%
GTGTCTCTGTCACATCTACT+CGG - chr2.2:5429394-5429413 None:intergenic 45.0%
GTTCGGAGTTGCTATGATGA+GGG + chr2.2:5430582-5430601 MS.gene30948:CDS 45.0%
TAAGGGGGGAGACAAAGAAA+GGG - chr2.2:5429727-5429746 None:intergenic 45.0%
TCCAGCTGTGGAGATAAAGA+TGG + chr2.2:5431773-5431792 MS.gene30948:CDS 45.0%
TCCGTTCTTAAAGGCGAAAG+AGG - chr2.2:5428360-5428379 None:intergenic 45.0%
TCCTGGAAGTTGGACTGTTA+AGG - chr2.2:5431149-5431168 None:intergenic 45.0%
TCTGGTTGTGGATGGATAAG+AGG - chr2.2:5430071-5430090 None:intergenic 45.0%
TGGAAGAGGATTTCCGTCTA+AGG + chr2.2:5431904-5431923 MS.gene30948:CDS 45.0%
TGTCTCTGTCACATCTACTC+GGG - chr2.2:5429393-5429412 None:intergenic 45.0%
TTAAGGGGGGAGACAAAGAA+AGG - chr2.2:5429728-5429747 None:intergenic 45.0%
TTCTTTGCCGAGGATCATCA+GGG - chr2.2:5431809-5431828 None:intergenic 45.0%
TTGGAAAATCGCAACGGAGA+TGG - chr2.2:5428111-5428130 None:intergenic 45.0%
TTTCTTTGCCGAGGATCATC+AGG - chr2.2:5431810-5431829 None:intergenic 45.0%
! AAGGGCCAGCTGATTTACAA+TGG - chr2.2:5429258-5429277 None:intergenic 45.0%
! ACTTGCTGAGAATGTGAAGG+AGG + chr2.2:5431474-5431493 MS.gene30948:CDS 45.0%
! AGGATTTCCGTCTAAGGCTT+GGG + chr2.2:5431910-5431929 MS.gene30948:CDS 45.0%
! CACTGTTGGTTGAGGTTGAT+CGG + chr2.2:5429411-5429430 MS.gene30948:CDS 45.0%
! CAGTGTTTTCTCCTTCCATG+AGG - chr2.2:5431314-5431333 None:intergenic 45.0%
! GCACTGACACATTTCCATGT+CGG + chr2.2:5429556-5429575 MS.gene30948:intron 45.0%
!! AGGCTTTTGCCACTTGCTTT+GGG + chr2.2:5430459-5430478 MS.gene30948:intron 45.0%
!! ATGAGAATTTTGGTGACCGG+AGG + chr2.2:5428666-5428685 MS.gene30948:CDS 45.0%
!! CCCCAATAAGTTTCTGGTTG+TGG - chr2.2:5430083-5430102 None:intergenic 45.0%
!! CTTGTTGTTGTGTGTTGCAG+TGG + chr2.2:5431118-5431137 MS.gene30948:intron 45.0%
!! TGATTACCAGAGCACTGTTG+TGG + chr2.2:5428559-5428578 MS.gene30948:intron 45.0%
!!! ATGTCTGGTTTTCTTTGCCG+AGG - chr2.2:5431819-5431838 None:intergenic 45.0%
!!! TTATATTTTTAATATGTATT+AGG + chr2.2:5431272-5431291 MS.gene30948:intron 5.0%
AAAATCGCAACGGAGATGGC+AGG - chr2.2:5428107-5428126 None:intergenic 50.0%
AAATCGCAACGGAGATGGCA+GGG - chr2.2:5428106-5428125 None:intergenic 50.0%
AGAACACCCCTGATGATCCT+CGG + chr2.2:5431799-5431818 MS.gene30948:CDS 50.0%
CCAATCAACATTGGGAACCC+AGG + chr2.2:5431336-5431355 MS.gene30948:CDS 50.0%
CCCTTAACAGTCCAACTTCC+AGG + chr2.2:5431145-5431164 MS.gene30948:CDS 50.0%
CCTGGGTTCCCAATGTTGAT+TGG - chr2.2:5431339-5431358 None:intergenic 50.0%
CGACACAGACACATTGACAC+CGG - chr2.2:5429644-5429663 None:intergenic 50.0%
CTCCTTCCATGAGGCGAATT+AGG - chr2.2:5431305-5431324 None:intergenic 50.0%
GTCTCTGTCACATCTACTCG+GGG - chr2.2:5429392-5429411 None:intergenic 50.0%
TCTTTGCCGAGGATCATCAG+GGG - chr2.2:5431808-5431827 None:intergenic 50.0%
TGATGGCCTAATTCGCCTCA+TGG + chr2.2:5431296-5431315 MS.gene30948:CDS 50.0%
TGGCCTTCCTCTTATGGAAG+AGG + chr2.2:5431890-5431909 MS.gene30948:CDS 50.0%
TGGTTGTACGTTACTTCCGC+TGG + chr2.2:5429030-5429049 MS.gene30948:intron 50.0%
! AAAGCGAGTTGGAGCAAGGT+CGG + chr2.2:5429922-5429941 MS.gene30948:intron 50.0%
! CGGTGTCAATGTGTCTGTGT+CGG + chr2.2:5429642-5429661 MS.gene30948:intron 50.0%
! GACAGAGACACTGTTGGTTG+AGG + chr2.2:5429403-5429422 MS.gene30948:CDS 50.0%
! GAGGATTTCCGTCTAAGGCT+TGG + chr2.2:5431909-5431928 MS.gene30948:CDS 50.0%
! GGATTTCCGTCTAAGGCTTG+GGG + chr2.2:5431911-5431930 MS.gene30948:CDS 50.0%
! TTGCAAAGCGAGTTGGAGCA+AGG + chr2.2:5429918-5429937 MS.gene30948:CDS 50.0%
!! GAGGCTTTTGCCACTTGCTT+TGG + chr2.2:5430458-5430477 MS.gene30948:intron 50.0%
!!! ACCGGAGGAGCTGGTTTTAT+TGG + chr2.2:5428681-5428700 MS.gene30948:CDS 50.0%
AATCGCAACGGAGATGGCAG+GGG - chr2.2:5428105-5428124 None:intergenic 55.0%
AGGCGAAAGAGGAAGCTCAC+AGG - chr2.2:5428349-5428368 None:intergenic 55.0%
CCATCGCGCAACTTGACCTT+TGG - chr2.2:5431873-5431892 None:intergenic 55.0%
CTATGATGAGGGCAAGCGTG+TGG + chr2.2:5430593-5430612 MS.gene30948:CDS 55.0%
CTTGGGCTTGCAAAGCGAGT+TGG + chr2.2:5429911-5429930 MS.gene30948:CDS 55.0%
GAAGATTGGAGAAGCAGGGC+AGG - chr2.2:5429450-5429469 None:intergenic 55.0%
GGCCTAATTCGCCTCATGGA+AGG + chr2.2:5431300-5431319 MS.gene30948:CDS 55.0%
TGGGAACCCCAAGCCTTAGA+CGG - chr2.2:5431920-5431939 None:intergenic 55.0%
! ACGTGTGTCGTTGTCGTGTC+GGG - chr2.2:5429586-5429605 None:intergenic 55.0%
! CACGTGTGTCGTTGTCGTGT+CGG - chr2.2:5429587-5429606 None:intergenic 55.0%
! CCAAAGGTCAAGTTGCGCGA+TGG + chr2.2:5431870-5431889 MS.gene30948:CDS 55.0%
!! ATTTTGGTGACCGGAGGAGC+TGG + chr2.2:5428672-5428691 MS.gene30948:CDS 55.0%
!! TACCAGAGCACTGTTGTGGC+CGG + chr2.2:5428563-5428582 MS.gene30948:intron 55.0%
GAGAAGCAGGGCAGGCAAGA+TGG - chr2.2:5429442-5429461 None:intergenic 60.0%
GCGCGATGGCCTTCCTCTTA+TGG + chr2.2:5431884-5431903 MS.gene30948:CDS 60.0%
! CGTGTGTCGTTGTCGTGTCG+GGG - chr2.2:5429585-5429604 None:intergenic 60.0%
!! ACCAGAGCACTGTTGTGGCC+GGG + chr2.2:5428564-5428583 MS.gene30948:intron 60.0%
TCCCGGCCACAACAGTGCTC+TGG - chr2.2:5428568-5428587 None:intergenic 65.0%
CGCAACGGAGATGGCAGGGG+AGG - chr2.2:5428102-5428121 None:intergenic 70.0%
! TCGTGTCGGGGCGCCCGACA+TGG - chr2.2:5429573-5429592 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 5428036 5431950 5428036 ID=MS.gene30948
chr2.2 mRNA 5428036 5431950 5428036 ID=MS.gene30948.t1;Parent=MS.gene30948
chr2.2 exon 5428036 5428140 5428036 ID=MS.gene30948.t1.exon1;Parent=MS.gene30948.t1
chr2.2 CDS 5428036 5428140 5428036 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5428660 5428746 5428660 ID=MS.gene30948.t1.exon2;Parent=MS.gene30948.t1
chr2.2 CDS 5428660 5428746 5428660 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5428843 5428930 5428843 ID=MS.gene30948.t1.exon3;Parent=MS.gene30948.t1
chr2.2 CDS 5428843 5428930 5428843 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5429399 5429490 5429399 ID=MS.gene30948.t1.exon4;Parent=MS.gene30948.t1
chr2.2 CDS 5429399 5429490 5429399 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5429875 5429939 5429875 ID=MS.gene30948.t1.exon5;Parent=MS.gene30948.t1
chr2.2 CDS 5429875 5429939 5429875 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5430031 5430119 5430031 ID=MS.gene30948.t1.exon6;Parent=MS.gene30948.t1
chr2.2 CDS 5430031 5430119 5430031 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5430580 5430657 5430580 ID=MS.gene30948.t1.exon7;Parent=MS.gene30948.t1
chr2.2 CDS 5430580 5430657 5430580 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5430769 5430862 5430769 ID=MS.gene30948.t1.exon8;Parent=MS.gene30948.t1
chr2.2 CDS 5430769 5430862 5430769 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5431138 5431204 5431138 ID=MS.gene30948.t1.exon9;Parent=MS.gene30948.t1
chr2.2 CDS 5431138 5431204 5431138 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5431294 5431357 5431294 ID=MS.gene30948.t1.exon10;Parent=MS.gene30948.t1
chr2.2 CDS 5431294 5431357 5431294 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5431455 5431495 5431455 ID=MS.gene30948.t1.exon11;Parent=MS.gene30948.t1
chr2.2 CDS 5431455 5431495 5431455 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
chr2.2 exon 5431765 5431950 5431765 ID=MS.gene30948.t1.exon12;Parent=MS.gene30948.t1
chr2.2 CDS 5431765 5431950 5431765 ID=cds.MS.gene30948.t1;Parent=MS.gene30948.t1
Gene Sequence

>MS.gene30948

ATGGCGTCGAATTCATCAAATGGAGATCAACATAATGGAGATCAACAGACAACAACAAAGCAACCTCCCCTGCCATCTCCGTTGCGATTTTCCAAATTCTTTCAGGTGAATTGCTGCATGATTGCATTTATTCATGCCGTTTTGTCATTTTGATTGTTTCTTGAATCATGTTTTGCCAAATATGTGTCGTTTTTATTGTGTGTTTGGTGCATTGTTTTATTTTGACACTGATAATGTTGAATTTGATAATGTTGAATTTGATTCTGACATGTAAAGCATAAATTGTGCATCAGATGATTACTTAGTTGTGCCTGTGAGCTTCCTCTTTCGCCTTTAAGAACGGATCTTTAGTTTTTTTTTTCTTTCCTGATCTGCCTATTGGTTTGTAATCATTGCATGCTATCATTTAGTAATTCAGGGAAGGGTATCAGATTTAACCCCGAAATGTGTTGGTGAATTATGTACTTTAGTGAGAGGATCCAATAAGACATAACATCTTATTATCTCACAATCAAAAAGTTTGTGATTACCAGAGCACTGTTGTGGCCGGGATCATTCATTGTATTAGTTATTTCTTATTCATGGATTCTTAGTCATGGTTTTTTCATTTCATCCTTGAACCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTTTGCAGGGCTTATTTCTTTCTGTGTATTTAGTATTCAAGTTTACTAGCTTTGACAAAGTTTCGGTACAACATAACACTATGTTTGTCTGCTCAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCACGGTATAATTTCTTCAGTTTTTCTATCACAATCATCTCCAGCCTGACTCTATTATTGCATATAAGATGAAATTTGAAATTGATGTTAAGATTTGTGTCATTTGGTTGTACGTTACTTCCGCTGGTCTCAAATATATGCAAAAACTGGTCAAAGAAAGTTGTTGTATTTGGACAAAATACATCAACTTCTTTGACCAATTTTTTCTTATAAGTATAAAGTATTTGGGGTGTTAAATATAGCTTGTTAGTGGTCTTAAAAACTATGAAGCATGCAACAGAAGCTTGTTGGTTATAAAATAAGATATTAAACTGACTACAAATCACTCACCATTGTAAATCAGCTGGCCCTTTGATATTGTACTTGTACAACACTAATGATGATGCTTCTTCATGAGCACCAAAATTTGTGTTTCCCATTGTTTTTAATAAACTATAGACCTCAACATTCATTTCTGTTTTTTCCCCGAGTAGATGTGACAGAGACACTGTTGGTTGAGGTTGATCGGATCTACCATCTTGCCTGCCCTGCTTCTCCAATCTTCTACAAATACAATCCTGTAAAGGTAGGATATTTATAGTCTGTATACATGACCCTGTGAACTGTCTAAAAGGCTTTATTGCCTCTGTAGCACTGACACATTTCCATGTCGGGCGCCCCGACACGACAACGACACACGTGATTACGTTCAACTAATTCATTTTTCAAATTTTTACCGGTGTCAATGTGTCTGTGTCGGTGTTTCATAGCTTATTTATTGCTTGCTACCTACAACATTTACAAAAGTATCTTACAGAACCCTTTCTTTGTCTCCCCCCTTAAATTTATGTACGAATTTTATCATTATTATTATTATATCCGGTAACTCAGATTATGTACATTTGTTGATTGATCTATCTGTGTAATGGACCTTTCAAATTATCTAACATTCAAAGGATTAACTTTACAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGTCGGCAATTTTTTCTTCTCTTTTTTTAAATATTTTGTTGATAATCAAACTGCTAGTGTCAGTTGGTTTTACCAAATCTTGATTTTCACAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTATTGGGGAAATGTCAATCCTATTGGTACATACTTATCCTCAATCCAAACTTGTGTTTCTATGGCATTCCAAACCGGATAGTCTAATTTAGTGGTTTATTTTTGGTTAATTGGTTAAGTGGATTTACATTATCATTTAGTTTTTATAATTCAAAGCAACATGTCTTTTTCGAAAATGTTTTTAATGGACAAACCATTTTTTCAGCTACGTACAAAGCTAAACATTTGAATATATGTTCTCTTTGAATTATATTTTTAAAATAAGACCACCACATCCATATATTTCCAAACTGTAGCAAAGAATTTTAATTTTTTAAGAGATGTCATTTCTTTTGAAGTTTTAGTCTCTTGAATCTCGATGATTGAGGCTTTTGCCACTTGCTTTGGGTTATTTTATATTAACAGTCCTCTTCAAACAAAAAAGATTATGTTTTGCAACCCATGGCCTCAAAAGATTTAGTGTAATTTAAGAATTTTTCACAACAGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGGTAATGTTATGCCATGTTTTCTTCACCAAACAAGTAAATCCTCATTGATAGAGGATATTGCCAATTTTTTTTTTTTTTTCATCTTTTGTTAACTGAACAATATTTTCACAGAAATACGCATTGCTAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCAATTCGGTAAGTCCTTAAATATTGTTTTGATCTGGTTGACTAAAATAATTTCTATGAGAAAATTACGTAACAGATGTACTGTTAACTCTTATGAAAAGAAAATATATACTGTAAACTTGGTCTTTATAAACAACAGATATATTTACTCGAATAGCTAGTTGTTTATCTGTTAAATTACGAGTCATTGATCTGAATACCTTGATTTAGTAGACTAGTCACAATTTCTTTTGCACTATTTTGAAACTGGATTCTTAACTGTTACTTGTTGTTGTGTGTTGCAGTGGTGAGCCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTATATATGAAGCGTTGCTCATCGTGTTTTGCTTTTAGATTTGCACATCAATGCTGATCTATGGTTGTTATATTTTTAATATGTATTAGGTTGATGGCCTAATTCGCCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTTTCTTTACAATACCAAGTGATACTTATGTGCAGTGTACGCTTTTTTATTCTTCTGTTGTACTTGTTTGAATTGATTATTTGTATTATTCTTTCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGGTCAGTTACAAACCATTTTAGTTCTTTTGGAATGTCAAATACGTCTCTTTATCTTAGTATTGTTATATTCCTGTTGCTATATTTAAGCTTAAACCTCTGAATAATGGAAAACGCAACTCTTGAATACCAATGTATAGGTCTTATATTTTACGATGAATTGTATATTATATGCATTTTACTAACTACGTGTAACATAACTTTGTGATTTAATAATAGAGATTTATGTGAATTATTTGACGTTAGTTAATCGTTTGTGGATGATTTTGCAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGCGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTAAGGCTTGGGGTTCCCAGAAAGAACTAA
Protein sequence

>MS.gene30948.t1

MASNSSNGDQHNGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN