Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021092.t1 | XP_003606662.2 | 99.4 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 4.50E-198 | 700.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021092.t1 | Q9SN95 | 90.0 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 8.7e-182 | 637.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021092.t1 | G7JUS9 | 99.4 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 3.3e-198 | 700.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene021092 | MS.gene30948 | PPI |
MS.gene08162 | MS.gene021092 | PPI |
MS.gene021092 | MS.gene042467 | PPI |
MS.gene021092 | MS.gene45481 | PPI |
MS.gene22302 | MS.gene021092 | PPI |
MS.gene61100 | MS.gene021092 | PPI |
MS.gene021092 | MS.gene41197 | PPI |
MS.gene63514 | MS.gene021092 | PPI |
MS.gene21669 | MS.gene021092 | PPI |
MS.gene55805 | MS.gene021092 | PPI |
MS.gene069594 | MS.gene021092 | PPI |
MS.gene22301 | MS.gene021092 | PPI |
MS.gene048934 | MS.gene021092 | PPI |
MS.gene021092 | MS.gene030443 | PPI |
MS.gene021092 | MS.gene21670 | PPI |
MS.gene51627 | MS.gene021092 | PPI |
MS.gene009458 | MS.gene021092 | PPI |
MS.gene021092 | MS.gene56256 | PPI |
MS.gene021092 | MS.gene72188 | PPI |
MS.gene021092 | MS.gene41778 | PPI |
MS.gene021092 | MS.gene067859 | PPI |
MS.gene021092 | MS.gene31166 | PPI |
MS.gene021092 | MS.gene000931 | PPI |
MS.gene024690 | MS.gene021092 | PPI |
MS.gene021092 | MS.gene052130 | PPI |
MS.gene021092 | MS.gene024691 | PPI |
MS.gene021092 | MS.gene06078 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021092.t1 | MTR_4g063600 | 99.422 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 0.0 | 708 |
MS.gene021092.t1 | MTR_4g063600 | 98.555 | 346 | 1 | 2 | 1 | 346 | 1 | 342 | 0.0 | 696 |
MS.gene021092.t1 | MTR_2g096660 | 90.000 | 350 | 30 | 1 | 1 | 345 | 1 | 350 | 0.0 | 655 |
MS.gene021092.t1 | MTR_4g120030 | 72.964 | 307 | 77 | 2 | 34 | 340 | 112 | 412 | 2.40e-165 | 468 |
MS.gene021092.t1 | MTR_1g088480 | 71.293 | 317 | 85 | 2 | 30 | 346 | 115 | 425 | 7.10e-165 | 467 |
MS.gene021092.t1 | MTR_1g067530 | 62.941 | 340 | 93 | 2 | 33 | 340 | 112 | 450 | 1.78e-150 | 432 |
MS.gene021092.t1 | MTR_1g107455 | 29.060 | 351 | 191 | 13 | 33 | 329 | 19 | 365 | 9.57e-28 | 112 |
MS.gene021092.t1 | MTR_4g056100 | 27.954 | 347 | 200 | 12 | 33 | 329 | 19 | 365 | 2.13e-27 | 111 |
MS.gene021092.t1 | MTR_2g073240 | 28.939 | 311 | 198 | 10 | 35 | 329 | 21 | 324 | 9.43e-27 | 111 |
MS.gene021092.t1 | MTR_7g115080 | 28.025 | 314 | 200 | 10 | 33 | 331 | 29 | 331 | 1.18e-26 | 108 |
MS.gene021092.t1 | MTR_7g115080 | 28.025 | 314 | 200 | 10 | 33 | 331 | 63 | 365 | 1.54e-26 | 109 |
MS.gene021092.t1 | MTR_7g115080 | 28.205 | 312 | 198 | 10 | 33 | 329 | 42 | 342 | 1.58e-26 | 108 |
MS.gene021092.t1 | MTR_0034s0060 | 28.296 | 311 | 200 | 10 | 35 | 329 | 139 | 442 | 5.55e-26 | 109 |
MS.gene021092.t1 | MTR_1g080950 | 27.832 | 309 | 208 | 9 | 33 | 331 | 28 | 331 | 7.40e-25 | 103 |
MS.gene021092.t1 | MTR_1g080950 | 27.832 | 309 | 208 | 9 | 33 | 331 | 64 | 367 | 1.26e-24 | 103 |
MS.gene021092.t1 | MTR_1g009600 | 27.273 | 319 | 209 | 10 | 35 | 337 | 7 | 318 | 2.07e-24 | 104 |
MS.gene021092.t1 | MTR_4g056100 | 28.522 | 291 | 171 | 10 | 33 | 286 | 19 | 309 | 8.21e-24 | 100 |
MS.gene021092.t1 | MTR_1g108530 | 26.647 | 334 | 203 | 11 | 33 | 329 | 19 | 347 | 2.22e-23 | 99.8 |
MS.gene021092.t1 | MTR_4g056100 | 28.736 | 261 | 153 | 8 | 33 | 260 | 19 | 279 | 7.20e-22 | 94.4 |
MS.gene021092.t1 | MTR_5g011940 | 27.273 | 330 | 202 | 12 | 31 | 329 | 88 | 410 | 1.99e-21 | 95.1 |
MS.gene021092.t1 | MTR_4g129820 | 26.807 | 332 | 203 | 13 | 30 | 329 | 92 | 415 | 2.56e-19 | 89.0 |
MS.gene021092.t1 | MTR_3g084090 | 25.460 | 326 | 205 | 11 | 35 | 329 | 101 | 419 | 7.06e-19 | 87.8 |
MS.gene021092.t1 | MTR_8g089180 | 25.501 | 349 | 220 | 11 | 15 | 329 | 53 | 395 | 1.89e-18 | 86.3 |
MS.gene021092.t1 | MTR_8g089180 | 25.501 | 349 | 220 | 11 | 15 | 329 | 53 | 395 | 1.89e-18 | 86.3 |
MS.gene021092.t1 | MTR_4g102270 | 26.048 | 334 | 201 | 13 | 31 | 329 | 91 | 413 | 7.28e-18 | 84.7 |
MS.gene021092.t1 | MTR_0354s0040 | 25.893 | 336 | 201 | 14 | 30 | 329 | 79 | 402 | 1.53e-17 | 83.6 |
MS.gene021092.t1 | MTR_2g032100 | 24.638 | 345 | 207 | 13 | 15 | 319 | 53 | 384 | 1.53e-17 | 83.6 |
MS.gene021092.t1 | MTR_8g099535 | 28.182 | 330 | 199 | 13 | 31 | 327 | 2 | 326 | 1.98e-17 | 82.4 |
MS.gene021092.t1 | MTR_4g024600 | 24.471 | 331 | 212 | 11 | 30 | 329 | 98 | 421 | 5.16e-17 | 82.0 |
MS.gene021092.t1 | MTR_4g134490 | 27.434 | 339 | 198 | 17 | 29 | 327 | 19 | 349 | 4.84e-15 | 75.9 |
MS.gene021092.t1 | MTR_8g096880 | 25.000 | 332 | 209 | 14 | 31 | 327 | 4 | 330 | 9.08e-14 | 72.0 |
MS.gene021092.t1 | MTR_8g096880 | 24.923 | 325 | 204 | 14 | 31 | 320 | 4 | 323 | 7.03e-13 | 68.9 |
MS.gene021092.t1 | MTR_5g009170 | 25.893 | 336 | 209 | 13 | 26 | 327 | 40 | 369 | 2.63e-12 | 67.8 |
MS.gene021092.t1 | MTR_2g041340 | 27.778 | 216 | 133 | 7 | 33 | 232 | 19 | 227 | 2.67e-12 | 65.9 |
MS.gene021092.t1 | MTR_7g108490 | 24.138 | 319 | 209 | 10 | 26 | 329 | 6 | 306 | 4.00e-12 | 66.6 |
MS.gene021092.t1 | MTR_7g108490 | 24.138 | 319 | 209 | 10 | 26 | 329 | 7 | 307 | 4.34e-12 | 66.6 |
MS.gene021092.t1 | MTR_2g032100 | 26.761 | 213 | 124 | 9 | 15 | 208 | 53 | 252 | 3.72e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021092.t1 | AT3G46440 | 89.971 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 0.0 | 626 |
MS.gene021092.t1 | AT3G46440 | 89.971 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 0.0 | 626 |
MS.gene021092.t1 | AT2G28760 | 88.696 | 345 | 37 | 1 | 1 | 345 | 32 | 374 | 0.0 | 625 |
MS.gene021092.t1 | AT2G28760 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
MS.gene021092.t1 | AT2G28760 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
MS.gene021092.t1 | AT2G28760 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
MS.gene021092.t1 | AT5G59290 | 87.647 | 340 | 42 | 0 | 5 | 344 | 17 | 356 | 0.0 | 619 |
MS.gene021092.t1 | AT5G59290 | 87.647 | 340 | 42 | 0 | 5 | 344 | 2 | 341 | 0.0 | 617 |
MS.gene021092.t1 | AT5G59290 | 91.054 | 313 | 28 | 0 | 32 | 344 | 22 | 334 | 0.0 | 603 |
MS.gene021092.t1 | AT5G59290 | 91.026 | 312 | 28 | 0 | 33 | 344 | 1 | 312 | 0.0 | 601 |
MS.gene021092.t1 | AT2G47650 | 72.611 | 314 | 85 | 1 | 33 | 346 | 121 | 433 | 3.35e-169 | 478 |
MS.gene021092.t1 | AT3G62830 | 71.924 | 317 | 88 | 1 | 30 | 346 | 116 | 431 | 1.44e-168 | 477 |
MS.gene021092.t1 | AT3G62830 | 71.924 | 317 | 88 | 1 | 30 | 346 | 116 | 431 | 1.44e-168 | 477 |
MS.gene021092.t1 | AT2G47650 | 71.250 | 320 | 85 | 2 | 33 | 346 | 121 | 439 | 2.20e-166 | 472 |
MS.gene021092.t1 | AT3G53520 | 71.061 | 311 | 89 | 1 | 30 | 340 | 117 | 426 | 1.12e-164 | 467 |
MS.gene021092.t1 | AT3G53520 | 70.740 | 311 | 88 | 2 | 30 | 340 | 117 | 424 | 5.99e-162 | 460 |
MS.gene021092.t1 | AT3G53520 | 64.583 | 336 | 91 | 3 | 30 | 340 | 117 | 449 | 4.40e-154 | 441 |
MS.gene021092.t1 | AT3G53520 | 74.775 | 222 | 55 | 1 | 30 | 251 | 117 | 337 | 5.42e-121 | 353 |
MS.gene021092.t1 | AT1G08200 | 29.107 | 347 | 196 | 12 | 33 | 329 | 18 | 364 | 3.49e-30 | 119 |
MS.gene021092.t1 | AT2G27860 | 28.818 | 347 | 197 | 12 | 33 | 329 | 18 | 364 | 3.42e-29 | 116 |
MS.gene021092.t1 | AT1G78570 | 28.754 | 313 | 196 | 10 | 35 | 329 | 9 | 312 | 2.39e-26 | 110 |
MS.gene021092.t1 | AT3G14790 | 28.435 | 313 | 197 | 10 | 35 | 329 | 12 | 315 | 8.03e-26 | 108 |
MS.gene021092.t1 | AT3G14790 | 28.435 | 313 | 197 | 10 | 35 | 329 | 9 | 312 | 8.07e-26 | 108 |
MS.gene021092.t1 | AT1G53500 | 27.476 | 313 | 200 | 10 | 35 | 329 | 11 | 314 | 1.72e-25 | 107 |
MS.gene021092.t1 | AT5G28840 | 28.065 | 310 | 208 | 9 | 32 | 331 | 27 | 331 | 3.52e-25 | 105 |
MS.gene021092.t1 | AT5G28840 | 28.065 | 310 | 208 | 9 | 32 | 331 | 27 | 331 | 3.52e-25 | 105 |
MS.gene021092.t1 | AT2G28755 | 70.175 | 57 | 17 | 0 | 249 | 305 | 4 | 60 | 6.23e-22 | 88.2 |
MS.gene021092.t1 | AT4G20460 | 24.496 | 347 | 222 | 10 | 17 | 329 | 54 | 394 | 6.52e-19 | 87.4 |
MS.gene021092.t1 | AT2G45310 | 25.071 | 351 | 217 | 12 | 14 | 329 | 78 | 417 | 9.36e-19 | 87.4 |
MS.gene021092.t1 | AT5G44480 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.30e-18 | 85.5 |
MS.gene021092.t1 | AT5G44480 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.30e-18 | 85.5 |
MS.gene021092.t1 | AT5G44480 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.30e-18 | 85.5 |
MS.gene021092.t1 | AT5G44480 | 24.556 | 338 | 202 | 11 | 25 | 322 | 87 | 411 | 3.81e-18 | 85.5 |
MS.gene021092.t1 | AT3G23820 | 25.210 | 357 | 204 | 13 | 10 | 329 | 102 | 432 | 5.28e-17 | 82.0 |
MS.gene021092.t1 | AT4G00110 | 24.545 | 330 | 203 | 12 | 35 | 329 | 93 | 411 | 1.26e-16 | 80.9 |
MS.gene021092.t1 | AT1G30620 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.54e-16 | 80.5 |
MS.gene021092.t1 | AT1G30620 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.54e-16 | 80.5 |
MS.gene021092.t1 | AT1G30620 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.54e-16 | 80.5 |
MS.gene021092.t1 | AT1G30620 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.54e-16 | 80.5 |
MS.gene021092.t1 | AT1G02000 | 23.881 | 335 | 209 | 12 | 30 | 329 | 89 | 412 | 1.90e-16 | 80.5 |
MS.gene021092.t1 | AT1G30620 | 25.429 | 350 | 219 | 11 | 15 | 329 | 52 | 394 | 2.73e-16 | 79.7 |
MS.gene021092.t1 | AT4G12250 | 25.602 | 332 | 207 | 13 | 30 | 329 | 93 | 416 | 5.94e-16 | 79.0 |
MS.gene021092.t1 | AT4G23920 | 27.607 | 326 | 198 | 12 | 35 | 327 | 5 | 325 | 1.15e-15 | 77.4 |
MS.gene021092.t1 | AT4G30440 | 23.780 | 328 | 212 | 10 | 33 | 329 | 88 | 408 | 6.31e-14 | 72.8 |
MS.gene021092.t1 | AT1G73250 | 24.684 | 316 | 210 | 7 | 26 | 329 | 10 | 309 | 1.24e-13 | 71.2 |
MS.gene021092.t1 | AT4G10960 | 26.380 | 326 | 202 | 12 | 35 | 327 | 6 | 326 | 2.31e-13 | 70.9 |
MS.gene021092.t1 | AT1G64440 | 26.426 | 333 | 193 | 13 | 35 | 327 | 5 | 325 | 1.98e-11 | 64.7 |
MS.gene021092.t1 | AT1G17890 | 23.899 | 318 | 210 | 9 | 26 | 329 | 5 | 304 | 2.71e-11 | 64.3 |
MS.gene021092.t1 | AT1G17890 | 23.899 | 318 | 210 | 9 | 26 | 329 | 5 | 304 | 2.71e-11 | 64.3 |
MS.gene021092.t1 | AT1G17890 | 23.899 | 318 | 210 | 9 | 26 | 329 | 13 | 312 | 3.38e-11 | 63.9 |
Find 101 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGTTTCTCCAAGTTCTTTC+AGG | 0.199352 | 4.3:+40204830 | MS.gene021092:CDS |
ACATTGCCCCAATAGCTTTC+AGG | 0.235265 | 4.3:-40206921 | None:intergenic |
AAACTGCGAGTTTGCGTTCC+TGG | 0.265729 | 4.3:-40207612 | None:intergenic |
TCCTTTGCTTTGGTTATGTC+TGG | 0.301398 | 4.3:-40208215 | None:intergenic |
GGATTATATTTGTAGAAAAT+AGG | 0.307972 | 4.3:-40206394 | None:intergenic |
TTTAATGTCCCTTAGGTTGA+TGG | 0.310321 | 4.3:+40207735 | MS.gene021092:intron |
ACATCAACTTCAGAGGTATA+TGG | 0.326566 | 4.3:+40206876 | MS.gene021092:CDS |
ACTATCTTTATCTCCACATT+TGG | 0.333705 | 4.3:-40208158 | None:intergenic |
TCCCCAACCTGAAAGCTATT+GGG | 0.342073 | 4.3:+40206914 | MS.gene021092:CDS |
CCTGGGTTGCCAAGATTGAT+TGG | 0.357256 | 4.3:-40207792 | None:intergenic |
GCAAGAATCTTCAACACATA+TGG | 0.358114 | 4.3:+40207398 | MS.gene021092:CDS |
GCCCCAATAGCTTTCAGGTT+GGG | 0.358874 | 4.3:-40206916 | None:intergenic |
TTTCTCTGTCTTGGATCATC+AGG | 0.361145 | 4.3:-40208191 | None:intergenic |
TGGGGCAATGTTAACCCTAT+TGG | 0.365765 | 4.3:+40206933 | MS.gene021092:CDS |
AACATGAGAATCTTGGTTAC+TGG | 0.366684 | 4.3:+40205762 | MS.gene021092:CDS |
GCCAAGCAATTCCTTTGCTT+TGG | 0.366826 | 4.3:-40208225 | None:intergenic |
ATCCCCAACCTGAAAGCTAT+TGG | 0.371953 | 4.3:+40206913 | MS.gene021092:CDS |
CTTTGATGTTTGATTATCAT+AGG | 0.378515 | 4.3:+40207241 | MS.gene021092:CDS |
TCACCTTGTCGATAGATTGA+TGG | 0.379182 | 4.3:+40205806 | MS.gene021092:CDS |
CCTTCACTCAGCTTGACCTT+TGG | 0.382651 | 4.3:-40208254 | None:intergenic |
CATCAACTTCAGAGGTATAT+GGG | 0.387261 | 4.3:+40206877 | MS.gene021092:CDS |
CCCCAATAGCTTTCAGGTTG+GGG | 0.394432 | 4.3:-40206915 | None:intergenic |
TTCAGGTGAATTCACGATGA+TGG | 0.402808 | 4.3:+40207893 | MS.gene021092:intron |
GTTGCTGATAACTTCTTCAC+TGG | 0.405680 | 4.3:+40206015 | MS.gene021092:CDS |
GGAGATTTCCGTTTGAGGCT+TGG | 0.416400 | 4.3:+40208293 | MS.gene021092:CDS |
ATCTTGGTTACTGGAGGAGC+TGG | 0.420013 | 4.3:+40205771 | MS.gene021092:CDS |
TTGGCACTCTGAACATGCTT+GGG | 0.428559 | 4.3:+40206719 | MS.gene021092:CDS |
TATCATAGGCAACATGGAAT+AGG | 0.430209 | 4.3:+40207255 | MS.gene021092:CDS |
AAGCAAAGGAATTGCTTGGC+TGG | 0.433406 | 4.3:+40208228 | MS.gene021092:CDS |
TTGAGTTACCTGAAAGAACT+TGG | 0.433833 | 4.3:-40204838 | None:intergenic |
TCAGAGGTCTTTGCAATGGC+AGG | 0.439922 | 4.3:+40204747 | None:intergenic |
ATTGGCACTCTGAACATGCT+TGG | 0.441893 | 4.3:+40206718 | MS.gene021092:CDS |
TGACGGATAAGTTCAAATCT+TGG | 0.447891 | 4.3:-40206072 | None:intergenic |
AGGAGGCTGCTTAGCTGTTG+TGG | 0.458824 | 4.3:-40204793 | None:intergenic |
GATAAAAGAACGTACCAATA+GGG | 0.459006 | 4.3:-40206947 | None:intergenic |
GAGTTTGCGTTCCTGGCGCT+TGG | 0.464935 | 4.3:-40207605 | None:intergenic |
GACACTGGTCCAATCAATCT+TGG | 0.466228 | 4.3:+40207783 | MS.gene021092:CDS |
TGGAAGGAGATTTCCGTTTG+AGG | 0.468564 | 4.3:+40208288 | MS.gene021092:CDS |
ATAGTCTAACATGAGAATCT+TGG | 0.477476 | 4.3:+40205755 | MS.gene021092:intron |
TCCTTGACTGTCCAAGCGCC+AGG | 0.479424 | 4.3:+40207594 | MS.gene021092:CDS |
TTGTAGAAAATAGGAGATGC+GGG | 0.480312 | 4.3:-40206385 | None:intergenic |
CTTGGGCTTGCAAAGAGAGT+TGG | 0.480768 | 4.3:+40206736 | MS.gene021092:CDS |
CGCAGGGGAGATGGCAAAGG+AGG | 0.489358 | 4.3:-40204810 | None:intergenic |
GAGTGAAGGTCTTCCTCTCA+TGG | 0.489967 | 4.3:+40208268 | MS.gene021092:CDS |
TGATGGCCTTATCCGTCTCA+TGG | 0.493071 | 4.3:+40207752 | MS.gene021092:CDS |
ACAATAAAGACAAATGTGAT+TGG | 0.494499 | 4.3:+40206700 | MS.gene021092:CDS |
AGCAAAGGAATTGCTTGGCT+GGG | 0.500005 | 4.3:+40208229 | MS.gene021092:CDS |
ATCCTCCCATGAGACGGATA+AGG | 0.500920 | 4.3:-40207758 | None:intergenic |
AAACGCAGGGGAGATGGCAA+AGG | 0.502480 | 4.3:-40204813 | None:intergenic |
AAATGTGGAGATAAAGATAG+TGG | 0.505212 | 4.3:+40208160 | MS.gene021092:CDS |
ATGGCAGGGAATTCTTCTAA+TGG | 0.507450 | 4.3:+40204762 | MS.gene021092:CDS |
TGTCAACTCCAAGCCTCAAA+CGG | 0.507833 | 4.3:-40208301 | None:intergenic |
TTGGAGAAACGCAGGGGAGA+TGG | 0.512183 | 4.3:-40204819 | None:intergenic |
CAAGAATCTTCAACACATAT+GGG | 0.513301 | 4.3:+40207399 | MS.gene021092:CDS |
AGACATTATCATACCTTCAC+AGG | 0.514773 | 4.3:-40206415 | None:intergenic |
TGCCCCAATAGCTTTCAGGT+TGG | 0.536093 | 4.3:-40206917 | None:intergenic |
CCTCGCATGAATATCGATGA+TGG | 0.536367 | 4.3:+40207422 | MS.gene021092:CDS |
TCCTGGCGCTTGGACAGTCA+AGG | 0.536722 | 4.3:-40207595 | None:intergenic |
ACCAAAGCAAAGGAATTGCT+TGG | 0.538585 | 4.3:+40208224 | MS.gene021092:CDS |
CACTGAGACTTTGATGATTG+AGG | 0.539187 | 4.3:+40206336 | MS.gene021092:CDS |
ATAATCAAACATCAAAGTCT+CGG | 0.547377 | 4.3:-40207235 | None:intergenic |
TCAGGTTGGGGATGCTCAAG+AGG | 0.553589 | 4.3:-40206903 | None:intergenic |
AGATTTGAACTTATCCGTCA+TGG | 0.559399 | 4.3:+40206075 | MS.gene021092:CDS |
GATGGAAAATGAAAAGAATG+AGG | 0.564416 | 4.3:+40205824 | MS.gene021092:CDS |
CAGAGGTCTTTGCAATGGCA+GGG | 0.566681 | 4.3:+40204748 | None:intergenic |
CGGAAATCTCCTTCCATGAG+AGG | 0.568379 | 4.3:-40208281 | None:intergenic |
GATGGCCTTATCCGTCTCAT+GGG | 0.568978 | 4.3:+40207753 | MS.gene021092:CDS |
CTACAAATATAATCCTGTGA+AGG | 0.580364 | 4.3:+40206402 | MS.gene021092:CDS |
CCCCAACCTGAAAGCTATTG+GGG | 0.582436 | 4.3:+40206915 | MS.gene021092:CDS |
GAAAGAACTTGGAGAAACGC+AGG | 0.583091 | 4.3:-40204827 | None:intergenic |
TTTGCTTACATCAACTTCAG+AGG | 0.585158 | 4.3:+40206869 | MS.gene021092:CDS |
GAAGGTCTTCCTCTCATGGA+AGG | 0.592285 | 4.3:+40208272 | MS.gene021092:CDS |
GTTCGTAGCTGCTATGACGA+GGG | 0.592450 | 4.3:+40207201 | MS.gene021092:CDS |
GCAGCTTATTAATCCAAATG+TGG | 0.592641 | 4.3:+40208145 | MS.gene021092:intron |
GGCCTTATCCGTCTCATGGG+AGG | 0.595699 | 4.3:+40207756 | MS.gene021092:CDS |
TAACTTCTTCACTGGATCGA+AGG | 0.596587 | 4.3:+40206023 | MS.gene021092:CDS |
ATTGCTTGGCTGGGAACCAA+AGG | 0.597155 | 4.3:+40208238 | MS.gene021092:CDS |
TTTGATTATCATAGGCAACA+TGG | 0.598463 | 4.3:+40207249 | MS.gene021092:CDS |
GAGATGCGGGGCATGCGAGA+TGG | 0.598472 | 4.3:-40206372 | None:intergenic |
CCAATCAATCTTGGCAACCC+AGG | 0.598660 | 4.3:+40207792 | MS.gene021092:CDS |
CCAAAGGTCAAGCTGAGTGA+AGG | 0.601047 | 4.3:+40208254 | MS.gene021092:CDS |
ACCAGACATAACCAAAGCAA+AGG | 0.602664 | 4.3:+40208214 | MS.gene021092:CDS |
TTTGTAGAAAATAGGAGATG+CGG | 0.604591 | 4.3:-40206386 | None:intergenic |
AGTTCGTAGCTGCTATGACG+AGG | 0.615229 | 4.3:+40207200 | MS.gene021092:CDS |
TTGCAAAGAGAGTTGGAGCA+AGG | 0.617224 | 4.3:+40206743 | MS.gene021092:CDS |
TTTCTGCTATGTCTCTGACC+TGG | 0.618172 | 4.3:+40207632 | MS.gene021092:CDS |
AAAGAACTTGGAGAAACGCA+GGG | 0.625919 | 4.3:-40204826 | None:intergenic |
TGTCTGATCCTCCCATGAGA+CGG | 0.626861 | 4.3:-40207764 | None:intergenic |
ATCAACTTCAGAGGTATATG+GGG | 0.630585 | 4.3:+40206878 | MS.gene021092:CDS |
TGAGACTTTGATGATTGAGG+TGG | 0.635484 | 4.3:+40206339 | MS.gene021092:CDS |
ATGAGAATCTTGGTTACTGG+AGG | 0.635776 | 4.3:+40205765 | MS.gene021092:CDS |
ACTTGCTGAGACAGTGAAGG+AGG | 0.645692 | 4.3:+40207917 | MS.gene021092:CDS |
TTCGTAGCTGCTATGACGAG+GGG | 0.651810 | 4.3:+40207202 | MS.gene021092:CDS |
CTCATGGGAGGATCAGACAC+TGG | 0.654323 | 4.3:+40207768 | MS.gene021092:CDS |
TTTCCATCAATCTATCGACA+AGG | 0.663439 | 4.3:-40205809 | None:intergenic |
CTATGACGAGGGGAAACGTG+TGG | 0.668216 | 4.3:+40207212 | MS.gene021092:CDS |
CCATCATCGATATTCATGCG+AGG | 0.684477 | 4.3:-40207422 | None:intergenic |
GGAACTTGCTGAGACAGTGA+AGG | 0.698005 | 4.3:+40207914 | MS.gene021092:CDS |
TGTAGAAAATAGGAGATGCG+GGG | 0.699354 | 4.3:-40206384 | None:intergenic |
AAGAACTTGGAGAAACGCAG+GGG | 0.748466 | 4.3:-40204825 | None:intergenic |
ACTTCATTGCTCAAGCACTG+CGG | 0.763614 | 4.3:+40207459 | MS.gene021092:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATAACAATTCAAAA+AGG | - | chr4.3:40207845-40207864 | None:intergenic | 10.0% |
!! | AAAAAAAAACAAAGATTGAA+CGG | - | chr4.3:40207667-40207686 | None:intergenic | 15.0% |
!! | AATTATAAAATTTATTCCCA+AGG | - | chr4.3:40206781-40206800 | None:intergenic | 15.0% |
!! | GTAAACATATTAAATAAGAA+AGG | - | chr4.3:40207064-40207083 | None:intergenic | 15.0% |
!! | TTATAAAAAAGATTCATTCA+AGG | - | chr4.3:40205319-40205338 | None:intergenic | 15.0% |
!! | AAAAAAAACAAAGATTGAAC+GGG | - | chr4.3:40207666-40207685 | None:intergenic | 20.0% |
!! | AAACTTACTGATGTTAAATA+TGG | + | chr4.3:40207982-40208001 | MS.gene021092:intron | 20.0% |
!! | ACAAAATAACTAACTTAACA+CGG | - | chr4.3:40204960-40204979 | None:intergenic | 20.0% |
!! | ATAATATACTCGTAAGTATT+TGG | - | chr4.3:40206208-40206227 | None:intergenic | 20.0% |
!! | ATAATTGAGAAAAGATCATA+TGG | + | chr4.3:40205354-40205373 | MS.gene021092:intron | 20.0% |
!! | ATGTTAGTTCATTCTTATAA+TGG | - | chr4.3:40205718-40205737 | None:intergenic | 20.0% |
!! | GGATTATATTTGTAGAAAAT+AGG | - | chr4.3:40206397-40206416 | None:intergenic | 20.0% |
!! | TTATTACATGATTATGAATG+AGG | + | chr4.3:40205692-40205711 | MS.gene021092:intron | 20.0% |
!!! | AACTTAATTTTGTTCATAAC+AGG | + | chr4.3:40207177-40207196 | MS.gene021092:intron | 20.0% |
!!! | ATCTTTAAAAATCATAGCAA+CGG | - | chr4.3:40207016-40207035 | None:intergenic | 20.0% |
!!! | CATCTATTTTATCGAATTTA+GGG | - | chr4.3:40205937-40205956 | None:intergenic | 20.0% |
!!! | TGTTTTTAGATTAGCTAAAT+GGG | - | chr4.3:40205427-40205446 | None:intergenic | 20.0% |
!!! | TTAGTTCTTATTTTATTGAC+AGG | + | chr4.3:40206844-40206863 | MS.gene021092:intron | 20.0% |
! | AAAAAAAACTACGAAAACCA+CGG | - | chr4.3:40204983-40205002 | None:intergenic | 25.0% |
! | ACAATAAAGACAAATGTGAT+TGG | + | chr4.3:40206700-40206719 | MS.gene021092:CDS | 25.0% |
! | AGATAGTTGAATTGAAAAAG+TGG | - | chr4.3:40206109-40206128 | None:intergenic | 25.0% |
! | ATAATCAAACATCAAAGTCT+CGG | - | chr4.3:40207238-40207257 | None:intergenic | 25.0% |
! | CAATTGTAAAAATCTAACCT+GGG | - | chr4.3:40207812-40207831 | None:intergenic | 25.0% |
! | CTTTGATGTTTGATTATCAT+AGG | + | chr4.3:40207241-40207260 | MS.gene021092:CDS | 25.0% |
! | GGATATAATTTCATTTCAGA+AGG | - | chr4.3:40206995-40207014 | None:intergenic | 25.0% |
! | GTGTAAACAAAACAATGAAA+CGG | - | chr4.3:40207956-40207975 | None:intergenic | 25.0% |
! | TAATATCAACATCTTGAATC+AGG | + | chr4.3:40205987-40206006 | MS.gene021092:intron | 25.0% |
! | TCAATGATCGAAATTGATAA+CGG | + | chr4.3:40205552-40205571 | MS.gene021092:intron | 25.0% |
! | TCAATTGTAAAAATCTAACC+TGG | - | chr4.3:40207813-40207832 | None:intergenic | 25.0% |
! | TTAAATAAGAAAGGTCTTCA+AGG | - | chr4.3:40207055-40207074 | None:intergenic | 25.0% |
! | TTATAATTTCAGCTTCTACA+TGG | + | chr4.3:40206793-40206812 | MS.gene021092:intron | 25.0% |
! | TTCTCATTGAATTATACTAG+TGG | + | chr4.3:40207694-40207713 | MS.gene021092:intron | 25.0% |
! | TTTAACATCCATTCATTACA+CGG | + | chr4.3:40206508-40206527 | MS.gene021092:intron | 25.0% |
!! | AAGGTTAGAAATTTTTCCTT+GGG | + | chr4.3:40206762-40206781 | MS.gene021092:intron | 25.0% |
!! | GCATCTATTTTATCGAATTT+AGG | - | chr4.3:40205938-40205957 | None:intergenic | 25.0% |
!! | TCTTCAATTTGAAGTTTAGT+AGG | + | chr4.3:40205123-40205142 | MS.gene021092:intron | 25.0% |
!! | TGTTATCTGAAACTAAACTT+GGG | + | chr4.3:40208090-40208109 | MS.gene021092:intron | 25.0% |
!!! | AATCTTTTTTATAAGTCTCG+AGG | + | chr4.3:40205325-40205344 | MS.gene021092:intron | 25.0% |
!!! | AGAGCATTGATTTAGAAATA+GGG | - | chr4.3:40207518-40207537 | None:intergenic | 25.0% |
!!! | ATCTTTTTTATAAGTCTCGA+GGG | + | chr4.3:40205326-40205345 | MS.gene021092:intron | 25.0% |
!!! | CTGTTTTTAGATTAGCTAAA+TGG | - | chr4.3:40205428-40205447 | None:intergenic | 25.0% |
!!! | CTTAGTTCTGTTTTTCTTTA+TGG | + | chr4.3:40206817-40206836 | MS.gene021092:intron | 25.0% |
!!! | TAGAGCATTGATTTAGAAAT+AGG | - | chr4.3:40207519-40207538 | None:intergenic | 25.0% |
!!! | TATGTATTTTAATGTCCCTT+AGG | + | chr4.3:40207728-40207747 | MS.gene021092:intron | 25.0% |
AAATGTGGAGATAAAGATAG+TGG | + | chr4.3:40208160-40208179 | MS.gene021092:CDS | 30.0% | |
ACACATTAGATAATCTCTCA+AGG | - | chr4.3:40206659-40206678 | None:intergenic | 30.0% | |
ACTATCTTTATCTCCACATT+TGG | - | chr4.3:40208161-40208180 | None:intergenic | 30.0% | |
ACTCAACCATTCATTTAGAT+TGG | - | chr4.3:40205481-40205500 | None:intergenic | 30.0% | |
AGATAAAAGAACGTACCAAT+AGG | - | chr4.3:40206951-40206970 | None:intergenic | 30.0% | |
ATAGTCTAACATGAGAATCT+TGG | + | chr4.3:40205755-40205774 | MS.gene021092:intron | 30.0% | |
ATGTTTACTTGCCAAGTAAA+CGG | - | chr4.3:40206460-40206479 | None:intergenic | 30.0% | |
CAAGAATCTTCAACACATAT+GGG | + | chr4.3:40207399-40207418 | MS.gene021092:CDS | 30.0% | |
CAGTTACCAATCTAAATGAA+TGG | + | chr4.3:40205472-40205491 | MS.gene021092:intron | 30.0% | |
CATTCAAGGATATAACAATG+AGG | - | chr4.3:40205305-40205324 | None:intergenic | 30.0% | |
CTACAAATATAATCCTGTGA+AGG | + | chr4.3:40206402-40206421 | MS.gene021092:CDS | 30.0% | |
CTTCAAGGTTTATTTAGTAC+AGG | - | chr4.3:40207040-40207059 | None:intergenic | 30.0% | |
GAAAAGACAGTTAGTTAAAC+TGG | - | chr4.3:40207542-40207561 | None:intergenic | 30.0% | |
GAAAAGATCATATGGATGTT+TGG | + | chr4.3:40205362-40205381 | MS.gene021092:intron | 30.0% | |
GAGAGATTATCTAATGTGTA+AGG | + | chr4.3:40206660-40206679 | MS.gene021092:intron | 30.0% | |
GATAAAAGAACGTACCAATA+GGG | - | chr4.3:40206950-40206969 | None:intergenic | 30.0% | |
GATGGAAAATGAAAAGAATG+AGG | + | chr4.3:40205824-40205843 | MS.gene021092:CDS | 30.0% | |
TAATCTAAAAACAGATTCCC+TGG | + | chr4.3:40205434-40205453 | MS.gene021092:intron | 30.0% | |
TCAATTTCAGAGGATAGATA+AGG | - | chr4.3:40205600-40205619 | None:intergenic | 30.0% | |
TTACAAAGCAAAACTTCTAC+AGG | - | chr4.3:40207337-40207356 | None:intergenic | 30.0% | |
TTGGAGATGTACTAAACAAA+TGG | - | chr4.3:40206189-40206208 | None:intergenic | 30.0% | |
TTTGATTATCATAGGCAACA+TGG | + | chr4.3:40207249-40207268 | MS.gene021092:CDS | 30.0% | |
TTTGTAGAAAATAGGAGATG+CGG | - | chr4.3:40206389-40206408 | None:intergenic | 30.0% | |
! | CAAGGTTAGAAATTTTTCCT+TGG | + | chr4.3:40206761-40206780 | MS.gene021092:intron | 30.0% |
! | CTGTTATCTGAAACTAAACT+TGG | + | chr4.3:40208089-40208108 | MS.gene021092:intron | 30.0% |
!! | AAGTGGATTTTATACCATGA+CGG | - | chr4.3:40206092-40206111 | None:intergenic | 30.0% |
!! | CTTAACACGGTTTTATATCA+CGG | - | chr4.3:40204947-40204966 | None:intergenic | 30.0% |
!! | TAAGTTAGTTATTTTGTCCG+TGG | + | chr4.3:40204963-40204982 | MS.gene021092:intron | 30.0% |
!! | TGTTGTTCTCATTTGTTTTC+TGG | + | chr4.3:40204904-40204923 | MS.gene021092:intron | 30.0% |
!!! | TCTTTTTTATAAGTCTCGAG+GGG | + | chr4.3:40205327-40205346 | MS.gene021092:intron | 30.0% |
AACATGAGAATCTTGGTTAC+TGG | + | chr4.3:40205762-40205781 | MS.gene021092:CDS | 35.0% | |
AACATGGAATAGGTAATTCC+TGG | + | chr4.3:40207265-40207284 | MS.gene021092:intron | 35.0% | |
AGACATTATCATACCTTCAC+AGG | - | chr4.3:40206418-40206437 | None:intergenic | 35.0% | |
AGATTTGAACTTATCCGTCA+TGG | + | chr4.3:40206075-40206094 | MS.gene021092:CDS | 35.0% | |
ATTCAAATCAGTGTGTGACT+CGG | + | chr4.3:40206239-40206258 | MS.gene021092:intron | 35.0% | |
CTTTAATCAGACCGTTTACT+TGG | + | chr4.3:40206446-40206465 | MS.gene021092:intron | 35.0% | |
GAAGGTCAATAAACAGTCAA+CGG | - | chr4.3:40206977-40206996 | None:intergenic | 35.0% | |
GACAACCTCAAAAAATGGAT+TGG | + | chr4.3:40206045-40206064 | MS.gene021092:CDS | 35.0% | |
GCAAGAATCTTCAACACATA+TGG | + | chr4.3:40207398-40207417 | MS.gene021092:CDS | 35.0% | |
GCAGCTTATTAATCCAAATG+TGG | + | chr4.3:40208145-40208164 | MS.gene021092:intron | 35.0% | |
TATCATAGGCAACATGGAAT+AGG | + | chr4.3:40207255-40207274 | MS.gene021092:CDS | 35.0% | |
TTGAGTTACCTGAAAGAACT+TGG | - | chr4.3:40204841-40204860 | None:intergenic | 35.0% | |
TTGTAGAAAATAGGAGATGC+GGG | - | chr4.3:40206388-40206407 | None:intergenic | 35.0% | |
TTTCCATCAATCTATCGACA+AGG | - | chr4.3:40205812-40205831 | None:intergenic | 35.0% | |
TTTGCTTACATCAACTTCAG+AGG | + | chr4.3:40206869-40206888 | MS.gene021092:CDS | 35.0% | |
! | ACATCAACTTCAGAGGTATA+TGG | + | chr4.3:40206876-40206895 | MS.gene021092:CDS | 35.0% |
! | ATCAACTTCAGAGGTATATG+GGG | + | chr4.3:40206878-40206897 | MS.gene021092:CDS | 35.0% |
! | CATCAACTTCAGAGGTATAT+GGG | + | chr4.3:40206877-40206896 | MS.gene021092:CDS | 35.0% |
! | GTCTTTTCTAACGTAACCAT+TGG | + | chr4.3:40207554-40207573 | MS.gene021092:intron | 35.0% |
! | TACTGAGTTACACACTGATT+TGG | - | chr4.3:40206282-40206301 | None:intergenic | 35.0% |
! | TAGACATTTTTGTGAACCAG+AGG | - | chr4.3:40205626-40205645 | None:intergenic | 35.0% |
! | TGACGGATAAGTTCAAATCT+TGG | - | chr4.3:40206075-40206094 | None:intergenic | 35.0% |
! | TTCGATCATTGATTGCAGAT+CGG | - | chr4.3:40205544-40205563 | None:intergenic | 35.0% |
!! | TAACCATTGGTGTGTTTTAG+TGG | + | chr4.3:40207567-40207586 | MS.gene021092:intron | 35.0% |
!! | TTTAATGTCCCTTAGGTTGA+TGG | + | chr4.3:40207735-40207754 | MS.gene021092:intron | 35.0% |
!!! | CTTTTTTATAAGTCTCGAGG+GGG | + | chr4.3:40205328-40205347 | MS.gene021092:intron | 35.0% |
!!! | GATGACCAATCCATTTTTTG+AGG | - | chr4.3:40206053-40206072 | None:intergenic | 35.0% |
!!! | TTTTTTATAAGTCTCGAGGG+GGG | + | chr4.3:40205329-40205348 | MS.gene021092:intron | 35.0% |
AAAGAACTTGGAGAAACGCA+GGG | - | chr4.3:40204829-40204848 | None:intergenic | 40.0% | |
ACCAAAGCAAAGGAATTGCT+TGG | + | chr4.3:40208224-40208243 | MS.gene021092:CDS | 40.0% | |
ACCAGACATAACCAAAGCAA+AGG | + | chr4.3:40208214-40208233 | MS.gene021092:CDS | 40.0% | |
AGAATGTAGCGTTATGCATG+TGG | - | chr4.3:40206573-40206592 | None:intergenic | 40.0% | |
AGTCTCAGTGACATCTACAA+AGG | - | chr4.3:40206326-40206345 | None:intergenic | 40.0% | |
ATATCTGCTGCATCACTCAT+TGG | + | chr4.3:40206611-40206630 | MS.gene021092:intron | 40.0% | |
ATGAGAATCTTGGTTACTGG+AGG | + | chr4.3:40205765-40205784 | MS.gene021092:CDS | 40.0% | |
ATGGCAGGGAATTCTTCTAA+TGG | + | chr4.3:40204762-40204781 | MS.gene021092:CDS | 40.0% | |
ATTAAGAGGAACAGAAGACC+AGG | - | chr4.3:40207286-40207305 | None:intergenic | 40.0% | |
ATTGAACGGGACATATTACC+AGG | - | chr4.3:40207653-40207672 | None:intergenic | 40.0% | |
CATCGTGAATTCACCTGAAA+AGG | - | chr4.3:40207892-40207911 | None:intergenic | 40.0% | |
CATTACACGGTCACTGAAAT+TGG | + | chr4.3:40206521-40206540 | MS.gene021092:intron | 40.0% | |
CGAAGGACAACCTCAAAAAA+TGG | + | chr4.3:40206040-40206059 | MS.gene021092:CDS | 40.0% | |
CGGCATGGTAATAGTAATAC+CGG | + | chr4.3:40205572-40205591 | MS.gene021092:intron | 40.0% | |
GAATGTAGCGTTATGCATGT+GGG | - | chr4.3:40206572-40206591 | None:intergenic | 40.0% | |
GGAGAACATAGCAGAAGAAA+AGG | - | chr4.3:40207497-40207516 | None:intergenic | 40.0% | |
GTCTCAGTGACATCTACAAA+GGG | - | chr4.3:40206325-40206344 | None:intergenic | 40.0% | |
GTTGCTGATAACTTCTTCAC+TGG | + | chr4.3:40206015-40206034 | MS.gene021092:CDS | 40.0% | |
TAACTTCTTCACTGGATCGA+AGG | + | chr4.3:40206023-40206042 | MS.gene021092:CDS | 40.0% | |
TATACCATACAGAGAACGAG+AGG | - | chr4.3:40207311-40207330 | None:intergenic | 40.0% | |
TCACCACTAAAACACACCAA+TGG | - | chr4.3:40207573-40207592 | None:intergenic | 40.0% | |
TCACCTTGTCGATAGATTGA+TGG | + | chr4.3:40205806-40205825 | MS.gene021092:CDS | 40.0% | |
TCAGAGGATAGATAAGGATC+CGG | - | chr4.3:40205594-40205613 | None:intergenic | 40.0% | |
TCCTTTGCTTTGGTTATGTC+TGG | - | chr4.3:40208218-40208237 | None:intergenic | 40.0% | |
TCTATATCGCTATTGCGTAG+CGG | + | chr4.3:40208006-40208025 | MS.gene021092:intron | 40.0% | |
TGTAGAAAATAGGAGATGCG+GGG | - | chr4.3:40206387-40206406 | None:intergenic | 40.0% | |
TGTAGCAAGTAGCACAAACA+CGG | + | chr4.3:40205008-40205027 | MS.gene021092:intron | 40.0% | |
TTCAGGTGAATTCACGATGA+TGG | + | chr4.3:40207893-40207912 | MS.gene021092:intron | 40.0% | |
TTCAGTGACCGTGTAATGAA+TGG | - | chr4.3:40206519-40206538 | None:intergenic | 40.0% | |
TTTCTCTGTCTTGGATCATC+AGG | - | chr4.3:40208194-40208213 | None:intergenic | 40.0% | |
! | CACTGAGACTTTGATGATTG+AGG | + | chr4.3:40206336-40206355 | MS.gene021092:CDS | 40.0% |
! | GTGTTGACAATTGCAAATCG+TGG | - | chr4.3:40208053-40208072 | None:intergenic | 40.0% |
! | TGAGACTTTGATGATTGAGG+TGG | + | chr4.3:40206339-40206358 | MS.gene021092:CDS | 40.0% |
! | TGCAACACGTATTTCTGCAT+TGG | - | chr4.3:40207381-40207400 | None:intergenic | 40.0% |
! | TTGAGTCTCTTTGCCTTTTC+AGG | + | chr4.3:40207876-40207895 | MS.gene021092:intron | 40.0% |
!! | CCAGAGGTATTCAATTTCAG+AGG | - | chr4.3:40205610-40205629 | None:intergenic | 40.0% |
!! | CCTCTGAAATTGAATACCTC+TGG | + | chr4.3:40205607-40205626 | MS.gene021092:intron | 40.0% |
!! | GATCGAAATTGATAACGGCA+TGG | + | chr4.3:40205557-40205576 | MS.gene021092:intron | 40.0% |
!!! | ATGTCTGGTTTTCTCTGTCT+TGG | - | chr4.3:40208203-40208222 | None:intergenic | 40.0% |
AAGAACTTGGAGAAACGCAG+GGG | - | chr4.3:40204828-40204847 | None:intergenic | 45.0% | |
AAGCAAAGGAATTGCTTGGC+TGG | + | chr4.3:40208228-40208247 | MS.gene021092:CDS | 45.0% | |
AAGTGACTGTGTAGTCACGT+GGG | + | chr4.3:40205072-40205091 | MS.gene021092:intron | 45.0% | |
ACATTGCCCCAATAGCTTTC+AGG | - | chr4.3:40206924-40206943 | None:intergenic | 45.0% | |
AGCAAAGGAATTGCTTGGCT+GGG | + | chr4.3:40208229-40208248 | MS.gene021092:CDS | 45.0% | |
ATCCCCAACCTGAAAGCTAT+TGG | + | chr4.3:40206913-40206932 | MS.gene021092:CDS | 45.0% | |
ATCTCCTCTCGTTCTCTGTA+TGG | + | chr4.3:40207304-40207323 | MS.gene021092:intron | 45.0% | |
ATTGGCACTCTGAACATGCT+TGG | + | chr4.3:40206718-40206737 | MS.gene021092:CDS | 45.0% | |
CCATCATCGATATTCATGCG+AGG | - | chr4.3:40207425-40207444 | None:intergenic | 45.0% | |
CCTCGCATGAATATCGATGA+TGG | + | chr4.3:40207422-40207441 | MS.gene021092:CDS | 45.0% | |
GAAAGAACTTGGAGAAACGC+AGG | - | chr4.3:40204830-40204849 | None:intergenic | 45.0% | |
GACACTGGTCCAATCAATCT+TGG | + | chr4.3:40207783-40207802 | MS.gene021092:CDS | 45.0% | |
GAGAACGAGAGGAGATTAAG+AGG | - | chr4.3:40207300-40207319 | None:intergenic | 45.0% | |
GCCAAGCAATTCCTTTGCTT+TGG | - | chr4.3:40208228-40208247 | None:intergenic | 45.0% | |
GCGTTTCTCCAAGTTCTTTC+AGG | + | chr4.3:40204830-40204849 | MS.gene021092:CDS | 45.0% | |
GGATAAGGCCATCAACCTAA+GGG | - | chr4.3:40207746-40207765 | None:intergenic | 45.0% | |
TCCCCAACCTGAAAGCTATT+GGG | + | chr4.3:40206914-40206933 | MS.gene021092:CDS | 45.0% | |
TGGAAGGAGATTTCCGTTTG+AGG | + | chr4.3:40208288-40208307 | MS.gene021092:CDS | 45.0% | |
TGGGGCAATGTTAACCCTAT+TGG | + | chr4.3:40206933-40206952 | MS.gene021092:CDS | 45.0% | |
TGTCAACTCCAAGCCTCAAA+CGG | - | chr4.3:40208304-40208323 | None:intergenic | 45.0% | |
TTGCAAAGAGAGTTGGAGCA+AGG | + | chr4.3:40206743-40206762 | MS.gene021092:CDS | 45.0% | |
TTGGCACTCTGAACATGCTT+GGG | + | chr4.3:40206719-40206738 | MS.gene021092:CDS | 45.0% | |
TTTCTGCTATGTCTCTGACC+TGG | + | chr4.3:40207632-40207651 | MS.gene021092:CDS | 45.0% | |
! | ACTTCATTGCTCAAGCACTG+CGG | + | chr4.3:40207459-40207478 | MS.gene021092:CDS | 45.0% |
!!! | ACTGGAGGAGCTGGTTTTAT+TGG | + | chr4.3:40205780-40205799 | MS.gene021092:CDS | 45.0% |
AAACTGCGAGTTTGCGTTCC+TGG | - | chr4.3:40207615-40207634 | None:intergenic | 50.0% | |
AGTTCGTAGCTGCTATGACG+AGG | + | chr4.3:40207200-40207219 | MS.gene021092:CDS | 50.0% | |
ATCCTCCCATGAGACGGATA+AGG | - | chr4.3:40207761-40207780 | None:intergenic | 50.0% | |
ATCTTGGTTACTGGAGGAGC+TGG | + | chr4.3:40205771-40205790 | MS.gene021092:CDS | 50.0% | |
ATTGCTTGGCTGGGAACCAA+AGG | + | chr4.3:40208238-40208257 | MS.gene021092:CDS | 50.0% | |
CCAAAGGTCAAGCTGAGTGA+AGG | + | chr4.3:40208254-40208273 | MS.gene021092:CDS | 50.0% | |
CCAATCAATCTTGGCAACCC+AGG | + | chr4.3:40207792-40207811 | MS.gene021092:CDS | 50.0% | |
CCCCAACCTGAAAGCTATTG+GGG | + | chr4.3:40206915-40206934 | MS.gene021092:CDS | 50.0% | |
CCTGGGTTGCCAAGATTGAT+TGG | - | chr4.3:40207795-40207814 | None:intergenic | 50.0% | |
CCTTCACTCAGCTTGACCTT+TGG | - | chr4.3:40208257-40208276 | None:intergenic | 50.0% | |
CGGAAATCTCCTTCCATGAG+AGG | - | chr4.3:40208284-40208303 | None:intergenic | 50.0% | |
CGGATAAGGCCATCAACCTA+AGG | - | chr4.3:40207747-40207766 | None:intergenic | 50.0% | |
CTTGGGCTTGCAAAGAGAGT+TGG | + | chr4.3:40206736-40206755 | MS.gene021092:CDS | 50.0% | |
GAAGGTCTTCCTCTCATGGA+AGG | + | chr4.3:40208272-40208291 | MS.gene021092:CDS | 50.0% | |
GAAGTGACTGTGTAGTCACG+TGG | + | chr4.3:40205071-40205090 | MS.gene021092:intron | 50.0% | |
GAGTGAAGGTCTTCCTCTCA+TGG | + | chr4.3:40208268-40208287 | MS.gene021092:CDS | 50.0% | |
GTTCGTAGCTGCTATGACGA+GGG | + | chr4.3:40207201-40207220 | MS.gene021092:CDS | 50.0% | |
TGCGTGACACAGTTACTCCA+GGG | - | chr4.3:40205454-40205473 | None:intergenic | 50.0% | |
TGTCTGATCCTCCCATGAGA+CGG | - | chr4.3:40207767-40207786 | None:intergenic | 50.0% | |
TTCGTAGCTGCTATGACGAG+GGG | + | chr4.3:40207202-40207221 | MS.gene021092:CDS | 50.0% | |
! | ACTTGCTGAGACAGTGAAGG+AGG | + | chr4.3:40207917-40207936 | MS.gene021092:CDS | 50.0% |
! | GGAGATTTCCGTTTGAGGCT+TGG | + | chr4.3:40208293-40208312 | MS.gene021092:CDS | 50.0% |
! | TGCCCCAATAGCTTTCAGGT+TGG | - | chr4.3:40206920-40206939 | None:intergenic | 50.0% |
!! | CCCCAATAGCTTTCAGGTTG+GGG | - | chr4.3:40206918-40206937 | None:intergenic | 50.0% |
!! | GATGGCCTTATCCGTCTCAT+GGG | + | chr4.3:40207753-40207772 | MS.gene021092:CDS | 50.0% |
!! | GCCCCAATAGCTTTCAGGTT+GGG | - | chr4.3:40206919-40206938 | None:intergenic | 50.0% |
!! | GGAACTTGCTGAGACAGTGA+AGG | + | chr4.3:40207914-40207933 | MS.gene021092:CDS | 50.0% |
!! | TGATGGCCTTATCCGTCTCA+TGG | + | chr4.3:40207752-40207771 | MS.gene021092:CDS | 50.0% |
AAACGCAGGGGAGATGGCAA+AGG | - | chr4.3:40204816-40204835 | None:intergenic | 55.0% | |
AGGAGGCTGCTTAGCTGTTG+TGG | - | chr4.3:40204796-40204815 | None:intergenic | 55.0% | |
CTATGACGAGGGGAAACGTG+TGG | + | chr4.3:40207212-40207231 | MS.gene021092:CDS | 55.0% | |
CTCATGGGAGGATCAGACAC+TGG | + | chr4.3:40207768-40207787 | MS.gene021092:CDS | 55.0% | |
CTGCGTGACACAGTTACTCC+AGG | - | chr4.3:40205455-40205474 | None:intergenic | 55.0% | |
GACTGTGTAGTCACGTGGGT+CGG | + | chr4.3:40205076-40205095 | MS.gene021092:intron | 55.0% | |
GCTGAGACAGTGAAGGAGGT+CGG | + | chr4.3:40207921-40207940 | MS.gene021092:intron | 55.0% | |
TTGGAGAAACGCAGGGGAGA+TGG | - | chr4.3:40204822-40204841 | None:intergenic | 55.0% | |
! | GAGGTCGTAGCAAGCTCTGA+TGG | - | chr4.3:40205286-40205305 | None:intergenic | 55.0% |
!! | TCAGGTTGGGGATGCTCAAG+AGG | - | chr4.3:40206906-40206925 | None:intergenic | 55.0% |
GAGTTTGCGTTCCTGGCGCT+TGG | - | chr4.3:40207608-40207627 | None:intergenic | 60.0% | |
GTAGTCACGTGGGTCGGTGT+CGG | + | chr4.3:40205082-40205101 | MS.gene021092:intron | 60.0% | |
TCCTGGCGCTTGGACAGTCA+AGG | - | chr4.3:40207598-40207617 | None:intergenic | 60.0% | |
TCCTTGACTGTCCAAGCGCC+AGG | + | chr4.3:40207594-40207613 | MS.gene021092:CDS | 60.0% | |
! | GGCCTTATCCGTCTCATGGG+AGG | + | chr4.3:40207756-40207775 | MS.gene021092:CDS | 60.0% |
CGCAGGGGAGATGGCAAAGG+AGG | - | chr4.3:40204813-40204832 | None:intergenic | 65.0% | |
GAGATGCGGGGCATGCGAGA+TGG | - | chr4.3:40206375-40206394 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 40204762 | 40208334 | 40204762 | ID=MS.gene021092 |
chr4.3 | mRNA | 40204762 | 40208334 | 40204762 | ID=MS.gene021092.t1;Parent=MS.gene021092 |
chr4.3 | exon | 40204762 | 40204851 | 40204762 | ID=MS.gene021092.t1.exon1;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40204762 | 40204851 | 40204762 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40205759 | 40205845 | 40205759 | ID=MS.gene021092.t1.exon2;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40205759 | 40205845 | 40205759 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40206009 | 40206096 | 40206009 | ID=MS.gene021092.t1.exon3;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40206009 | 40206096 | 40206009 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40206332 | 40206423 | 40206332 | ID=MS.gene021092.t1.exon4;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40206332 | 40206423 | 40206332 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40206700 | 40206764 | 40206700 | ID=MS.gene021092.t1.exon5;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40206700 | 40206764 | 40206700 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40206866 | 40206954 | 40206866 | ID=MS.gene021092.t1.exon6;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40206866 | 40206954 | 40206866 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40207199 | 40207276 | 40207199 | ID=MS.gene021092.t1.exon7;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40207199 | 40207276 | 40207199 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40207387 | 40207480 | 40207387 | ID=MS.gene021092.t1.exon8;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40207387 | 40207480 | 40207387 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40207587 | 40207653 | 40207587 | ID=MS.gene021092.t1.exon9;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40207587 | 40207653 | 40207587 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40207750 | 40207813 | 40207750 | ID=MS.gene021092.t1.exon10;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40207750 | 40207813 | 40207750 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40207898 | 40207938 | 40207898 | ID=MS.gene021092.t1.exon11;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40207898 | 40207938 | 40207898 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
chr4.3 | exon | 40208149 | 40208334 | 40208149 | ID=MS.gene021092.t1.exon12;Parent=MS.gene021092.t1 |
chr4.3 | CDS | 40208149 | 40208334 | 40208149 | ID=cds.MS.gene021092.t1;Parent=MS.gene021092.t1 |
Gene Sequence |
Protein sequence |