AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052130.t1 MTR_2g096660 99.715 351 1 0 1 351 1 351 0.0 727
MS.gene052130.t1 MTR_4g063600 90.000 350 29 1 1 350 1 344 0.0 655
MS.gene052130.t1 MTR_4g063600 89.143 350 29 2 1 350 1 341 0.0 644
MS.gene052130.t1 MTR_4g120030 70.846 319 87 2 27 345 100 412 4.16e-163 462
MS.gene052130.t1 MTR_1g088480 71.704 311 82 2 35 345 115 419 3.08e-161 458
MS.gene052130.t1 MTR_1g067530 62.941 340 93 2 38 345 112 450 1.35e-148 427
MS.gene052130.t1 MTR_1g107455 30.659 349 188 12 38 334 19 365 2.41e-31 122
MS.gene052130.t1 MTR_4g056100 29.395 347 195 11 38 334 19 365 5.65e-31 121
MS.gene052130.t1 MTR_4g053420 28.613 346 196 11 38 334 14 357 8.25e-31 120
MS.gene052130.t1 MTR_7g115080 27.143 350 222 10 1 336 1 331 1.89e-28 114
MS.gene052130.t1 MTR_7g115080 27.299 348 220 10 1 334 14 342 2.14e-28 114
MS.gene052130.t1 MTR_7g115080 27.143 350 222 10 1 336 35 365 2.38e-28 114
MS.gene052130.t1 MTR_2g073240 30.892 314 188 10 40 334 21 324 2.79e-27 113
MS.gene052130.t1 MTR_1g108530 28.916 332 198 11 38 334 19 347 5.61e-27 110
MS.gene052130.t1 MTR_4g056100 30.420 286 162 9 38 286 19 304 1.15e-26 107
MS.gene052130.t1 MTR_0034s0060 29.936 314 191 10 40 334 139 442 1.20e-25 108
MS.gene052130.t1 MTR_1g080950 28.662 314 199 11 38 336 28 331 5.60e-25 104
MS.gene052130.t1 MTR_1g080950 28.662 314 199 11 38 336 64 367 7.55e-25 104
MS.gene052130.t1 MTR_1g009600 28.660 321 202 9 40 342 7 318 8.81e-25 105
MS.gene052130.t1 MTR_4g056100 29.502 261 151 7 38 265 19 279 2.47e-23 98.2
MS.gene052130.t1 MTR_4g129820 26.567 335 200 13 35 334 92 415 5.01e-19 88.2
MS.gene052130.t1 MTR_5g011940 26.667 330 204 12 36 334 88 410 7.41e-18 84.7
MS.gene052130.t1 MTR_2g032100 25.217 345 205 12 20 324 53 384 4.28e-17 82.4
MS.gene052130.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene052130.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene052130.t1 MTR_3g084090 25.758 330 199 13 40 334 101 419 2.82e-16 80.1
MS.gene052130.t1 MTR_4g024600 24.324 333 210 12 35 334 98 421 1.39e-14 74.7
MS.gene052130.t1 MTR_8g099535 26.970 330 203 13 36 332 2 326 1.59e-14 73.9
MS.gene052130.t1 MTR_4g102270 25.758 330 207 13 36 334 91 413 2.04e-14 74.3
MS.gene052130.t1 MTR_8g096880 24.620 329 206 13 35 327 3 325 5.18e-13 69.7
MS.gene052130.t1 MTR_5g009160 26.061 330 206 13 36 332 2 326 1.07e-12 68.6
MS.gene052130.t1 MTR_8g096880 24.465 327 205 13 35 325 3 323 1.44e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052130.t1 AT5G59290 90.476 336 32 0 14 349 21 356 0.0 629
MS.gene052130.t1 AT2G28760 86.857 350 39 1 1 350 32 374 0.0 629
MS.gene052130.t1 AT5G59290 90.476 336 32 0 14 349 6 341 0.0 628
MS.gene052130.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene052130.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene052130.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene052130.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene052130.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene052130.t1 AT5G59290 92.332 313 24 0 37 349 22 334 0.0 609
MS.gene052130.t1 AT5G59290 92.308 312 24 0 38 349 1 312 0.0 608
MS.gene052130.t1 AT2G47650 73.377 308 81 1 38 345 121 427 2.80e-165 469
MS.gene052130.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene052130.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene052130.t1 AT2G47650 71.975 314 81 2 38 345 121 433 7.18e-163 463
MS.gene052130.t1 AT3G53520 71.061 311 89 1 35 345 117 426 7.76e-163 462
MS.gene052130.t1 AT3G53520 70.740 311 88 2 35 345 117 424 5.14e-160 455
MS.gene052130.t1 AT3G53520 64.583 336 91 3 35 345 117 449 1.64e-152 437
MS.gene052130.t1 AT3G53520 75.225 222 54 1 35 256 117 337 6.00e-119 348
MS.gene052130.t1 AT1G08200 30.836 347 190 12 38 334 18 364 2.50e-33 127
MS.gene052130.t1 AT2G27860 30.548 347 191 12 38 334 18 364 3.50e-32 124
MS.gene052130.t1 AT1G53500 30.032 313 192 9 40 334 11 314 4.79e-28 115
MS.gene052130.t1 AT1G78570 30.032 313 192 9 40 334 9 312 3.39e-27 113
MS.gene052130.t1 AT3G14790 30.032 313 192 9 40 334 9 312 9.30e-27 111
MS.gene052130.t1 AT3G14790 30.032 313 192 9 40 334 12 315 1.01e-26 111
MS.gene052130.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene052130.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene052130.t1 AT2G28755 70.175 57 17 0 254 310 4 60 4.80e-21 85.9
MS.gene052130.t1 AT4G20460 25.294 340 213 10 22 327 54 386 2.86e-19 88.6
MS.gene052130.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene052130.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene052130.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene052130.t1 AT5G44480 25.723 346 203 12 30 334 87 419 5.11e-19 88.2
MS.gene052130.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene052130.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene052130.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene052130.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene052130.t1 AT1G30620 25.731 342 213 10 20 327 52 386 4.25e-17 82.4
MS.gene052130.t1 AT2G45310 24.566 346 215 12 24 334 83 417 1.15e-16 81.3
MS.gene052130.t1 AT4G00110 24.545 330 203 12 40 334 93 411 6.47e-15 75.9
MS.gene052130.t1 AT1G73250 24.684 316 210 7 31 334 10 309 2.75e-14 73.2
MS.gene052130.t1 AT4G12250 25.301 332 208 13 35 334 93 416 1.09e-13 72.0
MS.gene052130.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene052130.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene052130.t1 AT1G17890 23.511 319 210 10 31 334 13 312 1.67e-11 65.1

Find 95 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTATTTAGTTCTTTC+TGG 0.093558 2.3:-6023365 None:intergenic
GCAATTCACCTGAAAGAATT+TGG 0.163974 2.3:-6019544 None:intergenic
ACATTTCCCCAATAAGTTTC+TGG 0.179736 2.3:-6021513 None:intergenic
TATAAATATCCTACCTTTAC+AGG 0.215426 2.3:-6020909 None:intergenic
ATCCACAACCAGAAACTTAT+TGG 0.241528 2.3:+6021505 MS.gene052130:CDS
GCGCGATGGCCTTCCGCTTA+TGG 0.272757 2.3:+6023312 MS.gene052130:CDS
ACAATAAAGACTAATGTAAT+TGG 0.274753 2.3:+6021302 MS.gene052130:CDS
CCAGTCCAATATGAGAATTT+TGG 0.274767 2.3:+6020083 MS.gene052130:intron
TTTAATATGTATTAGGTTGA+TGG 0.307326 2.3:+6022707 MS.gene052130:intron
CCTGGAAGTTGGACTGTTAA+GGG 0.329431 2.3:-6022573 None:intergenic
AAACTGCGAGTTTGTGTTCC+TGG 0.333294 2.3:-6022591 None:intergenic
TCACCTTGTTGACAGATTGA+TGG 0.336356 2.3:+6020134 MS.gene052130:CDS
TCCTGGAAGTTGGACTGTTA+AGG 0.339907 2.3:-6022574 None:intergenic
CTCCTTCCATGAGGCGAATT+AGG 0.346004 2.3:-6022730 None:intergenic
TGGAAGAGGATTTCCGTCTA+AGG 0.354083 2.3:+6023332 MS.gene052130:CDS
TCCACAACCAGAAACTTATT+GGG 0.354322 2.3:+6021506 MS.gene052130:CDS
GGATTGTATTTGTAGAAGAT+TGG 0.356058 2.3:-6020888 None:intergenic
AGGATTTCCGTCTAAGGCTT+GGG 0.356905 2.3:+6023338 MS.gene052130:CDS
CCCTTAACAGTCCAACTTCC+AGG 0.358179 2.3:+6022573 MS.gene052130:CDS
CCCCAATAAGTTTCTGGTTG+TGG 0.359244 2.3:-6021507 None:intergenic
CCATCGCGCAACTTGACCTT+TGG 0.359997 2.3:-6023298 None:intergenic
TTTCTTTGCCGAGGATCATC+AGG 0.362452 2.3:-6023235 None:intergenic
TGGGGAAATGTCAATCCTAT+TGG 0.373968 2.3:+6021525 MS.gene052130:CDS
AACTTTATTTAGTTCTTTCT+GGG 0.379408 2.3:-6023364 None:intergenic
CCTGGGTTCCCAATGTTGAT+TGG 0.380574 2.3:-6022764 None:intergenic
TATCATAGGCAGCATGGATT+AGG 0.389706 2.3:+6022063 MS.gene052130:CDS
ACATCTACTTCAGAAGTATA+TGG 0.391713 2.3:+6021468 MS.gene052130:CDS
GGTCACCAAAATTCTCATAT+TGG 0.401935 2.3:-6020088 None:intergenic
TCAAATGGAGATCAACATAA+TGG 0.401989 2.3:+6019468 MS.gene052130:CDS
CTTTGATGTTTGATTATCAT+AGG 0.405550 2.3:+6022049 MS.gene052130:CDS
TCTGGTTGTGGATGGATAAG+AGG 0.414750 2.3:-6021495 None:intergenic
GCTAGAATCTTCAACACATA+TGG 0.419857 2.3:+6022208 MS.gene052130:CDS
TTGGAACACTGAACATGCTT+GGG 0.433117 2.3:+6021321 MS.gene052130:CDS
ACCAATAAAACCAGCTCCTC+CGG 0.437691 2.3:-6020109 None:intergenic
GAGGATTTCCGTCTAAGGCT+TGG 0.451269 2.3:+6023337 MS.gene052130:CDS
ACTTTATTGCTCAAGCAATT+CGG 0.455967 2.3:+6022269 MS.gene052130:CDS
CACTGTTGGTTGAGGTTGAT+CGG 0.459878 2.3:+6020838 MS.gene052130:CDS
GTAGCTGATAATTACTTCAC+TGG 0.462377 2.3:+6020276 MS.gene052130:CDS
TGGCCTTCCGCTTATGGAAG+AGG 0.463681 2.3:+6023318 MS.gene052130:CDS
ACCATCTTTATCTCCACAGC+TGG 0.464169 2.3:-6023202 None:intergenic
CTTGGGCTTGCAAAGCGAGT+TGG 0.491265 2.3:+6021338 MS.gene052130:CDS
AAGCAACAGAATTGCTTGGA+TGG 0.498380 2.3:+6023272 MS.gene052130:CDS
TTGTAGAAGATTGGAGAAGC+GGG 0.501772 2.3:-6020879 None:intergenic
CCACGCATGAATATCGATGA+TGG 0.501885 2.3:+6022232 MS.gene052130:CDS
GAGAAGCGGGGCAGGCAAGA+TGG 0.508625 2.3:-6020866 None:intergenic
ATGGCGTCGAATTCATCAAA+TGG 0.515385 2.3:+6019453 MS.gene052130:CDS
ATTGGAACACTGAACATGCT+TGG 0.517074 2.3:+6021320 MS.gene052130:CDS
ACACTGGTCCAATCAACATT+GGG 0.518433 2.3:+6022756 MS.gene052130:CDS
GAAGATTGGAGAAGCGGGGC+AGG 0.518829 2.3:-6020874 None:intergenic
AATAAGTTTCTGGTTGTGGA+TGG 0.522152 2.3:-6021503 None:intergenic
CTACAAATACAATCCTGTAA+AGG 0.522717 2.3:+6020896 MS.gene052130:CDS
TTGGAAAATCGCAACGGAGA+TGG 0.523155 2.3:-6019525 None:intergenic
AAAATCGCAACGGAGATGGC+AGG 0.524114 2.3:-6019521 None:intergenic
ACAAAAGCAACAGAATTGCT+TGG 0.526474 2.3:+6023268 MS.gene052130:CDS
AGCAACAGAATTGCTTGGAT+GGG 0.536467 2.3:+6023273 MS.gene052130:CDS
CGCAACGGAGATGGCAGGGG+AGG 0.538853 2.3:-6019516 None:intergenic
AACACTGGTCCAATCAACAT+TGG 0.539937 2.3:+6022755 MS.gene052130:CDS
TGATGGCCTAATTCGCCTCA+TGG 0.540095 2.3:+6022724 MS.gene052130:CDS
CTGGTTGTGGATGGATAAGA+GGG 0.540478 2.3:-6021494 None:intergenic
GAGTTTGTGTTCCTGGAAGT+TGG 0.549267 2.3:-6022584 None:intergenic
AATCGCAACGGAGATGGCAG+GGG 0.551999 2.3:-6019519 None:intergenic
GGCCTAATTCGCCTCATGGA+AGG 0.552535 2.3:+6022728 MS.gene052130:CDS
TTTGATTATCATAGGCAGCA+TGG 0.553866 2.3:+6022057 MS.gene052130:CDS
AAATCGCAACGGAGATGGCA+GGG 0.556402 2.3:-6019520 None:intergenic
TTCTTTGCCGAGGATCATCA+GGG 0.558934 2.3:-6023234 None:intergenic
TGGGAACCCCAAGCCTTAGA+CGG 0.568610 2.3:-6023345 None:intergenic
GGATTTCCGTCTAAGGCTTG+GGG 0.572674 2.3:+6023339 MS.gene052130:CDS
CCAATCAACATTGGGAACCC+AGG 0.578663 2.3:+6022764 MS.gene052130:CDS
CACGCATGAATATCGATGAT+GGG 0.584892 2.3:+6022233 MS.gene052130:CDS
GACAGAGACACTGTTGGTTG+AGG 0.589326 2.3:+6020830 MS.gene052130:CDS
AGTTCGGAGTTGCTATGATG+AGG 0.589902 2.3:+6022008 MS.gene052130:CDS
CGGAAATCCTCTTCCATAAG+CGG 0.593358 2.3:-6023325 None:intergenic
TTGCAAAGCGAGTTGGAGCA+AGG 0.600057 2.3:+6021345 MS.gene052130:CDS
TTTGTAGAAGATTGGAGAAG+CGG 0.600224 2.3:-6020880 None:intergenic
TCCAGCTGTGGAGATAAAGA+TGG 0.604901 2.3:+6023201 MS.gene052130:CDS
GTTCGGAGTTGCTATGATGA+GGG 0.608208 2.3:+6022009 MS.gene052130:CDS
AGAACACCCCTGATGATCCT+CGG 0.608361 2.3:+6023227 MS.gene052130:CDS
CCAAAGGTCAAGTTGCGCGA+TGG 0.618122 2.3:+6023298 MS.gene052130:CDS
TGACGAATTAGCTCAAATCT+CGG 0.620678 2.3:-6020333 None:intergenic
GCAGCTTATTAATCCAGCTG+TGG 0.624211 2.3:+6023189 MS.gene052130:intron
TTTCCATCAATCTGTCAACA+AGG 0.639034 2.3:-6020137 None:intergenic
ATTGCTTGGATGGGAACCAA+AGG 0.642197 2.3:+6023282 MS.gene052130:CDS
TTTCTGCTATGTCTCTGACA+TGG 0.642724 2.3:+6022611 MS.gene052130:CDS
AATCCTCTTCCATAAGCGGA+AGG 0.645233 2.3:-6023321 None:intergenic
TGAACTTGCTGAGAATGTGA+AGG 0.652182 2.3:+6022899 MS.gene052130:CDS
TGTAGAAGATTGGAGAAGCG+GGG 0.659931 2.3:-6020878 None:intergenic
AGATTTGAGCTAATTCGTCA+CGG 0.665442 2.3:+6020336 MS.gene052130:CDS
AAGAATTTGGAAAATCGCAA+CGG 0.666135 2.3:-6019531 None:intergenic
CTATGATGAGGGCAAGCGTG+TGG 0.675259 2.3:+6022020 MS.gene052130:CDS
CCATCATCGATATTCATGCG+TGG 0.676212 2.3:-6022232 None:intergenic
CCACAACCAGAAACTTATTG+GGG 0.681738 2.3:+6021507 MS.gene052130:CDS
ACTTGCTGAGAATGTGAAGG+AGG 0.688062 2.3:+6022902 MS.gene052130:CDS
TCTTTGCCGAGGATCATCAG+GGG 0.694879 2.3:-6023233 None:intergenic
CTCATGGAAGGAGAAAACAC+TGG 0.733060 2.3:+6022740 MS.gene052130:CDS
AGATGTGACAGAGACACTGT+TGG 0.774861 2.3:+6020824 MS.gene052130:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATTATTATTATTATATC+CGG + chr2.3:6021192-6021211 MS.gene052130:intron 10.0%
!! TATAGTTTATTAAAAACAAT+GGG - chr2.3:6020770-6020789 None:intergenic 10.0%
!! TTATACTTATAAGAAAAAAT+TGG - chr2.3:6020552-6020571 None:intergenic 10.0%
!! AAAATTCGTACATAAATTTA+AGG - chr2.3:6021172-6021191 None:intergenic 15.0%
!! AAATTCGTACATAAATTTAA+GGG - chr2.3:6021171-6021190 None:intergenic 15.0%
!! ATTATTTGTATTATTCTTTC+AGG + chr2.3:6022861-6022880 MS.gene052130:intron 15.0%
!! CTATAGTTTATTAAAAACAA+TGG - chr2.3:6020771-6020790 None:intergenic 15.0%
!!! CTTATAAGTATAAAGTATTT+GGG + chr2.3:6020559-6020578 MS.gene052130:intron 15.0%
!!! TATTAGTTATTTCTTATTCA+TGG + chr2.3:6020025-6020044 MS.gene052130:intron 15.0%
!!! TCTTATAAGTATAAAGTATT+TGG + chr2.3:6020558-6020577 MS.gene052130:intron 15.0%
!!! TTATAAGTATAAAGTATTTG+GGG + chr2.3:6020560-6020579 MS.gene052130:intron 15.0%
!!! TTCATTTTTCAAATTTTTAC+CGG + chr2.3:6021049-6021068 MS.gene052130:intron 15.0%
!!! TTTTTCGAAAATGTTTTTAA+TGG + chr2.3:6021686-6021705 MS.gene052130:intron 15.0%
!! AAAATATAAGACCTATACAT+TGG - chr2.3:6023053-6023072 None:intergenic 20.0%
!! AAACAATCAAAATGACAAAA+CGG - chr2.3:6019592-6019611 None:intergenic 20.0%
!! AATTCGTACATAAATTTAAG+GGG - chr2.3:6021170-6021189 None:intergenic 20.0%
!! ACAATAAAGACTAATGTAAT+TGG + chr2.3:6021302-6021321 MS.gene052130:CDS 20.0%
!! GAAAATATATACTGTAAACT+TGG + chr2.3:6022382-6022401 MS.gene052130:intron 20.0%
!! TCAAATTATCTAACATTCAA+AGG + chr2.3:6021266-6021285 MS.gene052130:intron 20.0%
!! TGAATGTTAGATAATTTGAA+AGG - chr2.3:6021265-6021284 None:intergenic 20.0%
!!! AAATTACACTAAATCTTTTG+AGG - chr2.3:6021969-6021988 None:intergenic 20.0%
!!! ATAATCTTTTTTGTTTGAAG+AGG - chr2.3:6021930-6021949 None:intergenic 20.0%
!!! ATTTAAGAATTTTTCACAAC+AGG + chr2.3:6021985-6022004 MS.gene052130:intron 20.0%
!!! CTAATTTAGTGGTTTATTTT+TGG + chr2.3:6021604-6021623 MS.gene052130:intron 20.0%
!!! TTTAATATGTATTAGGTTGA+TGG + chr2.3:6022707-6022726 MS.gene052130:intron 20.0%
!!! TTTTTTCATCTTTTGTTAAC+TGG + chr2.3:6022159-6022178 MS.gene052130:intron 20.0%
! AAAAACAGAAATGAATGTTG+AGG - chr2.3:6020795-6020814 None:intergenic 25.0%
! ACATTCCAAAAGAACTAAAA+TGG - chr2.3:6022939-6022958 None:intergenic 25.0%
! ATGCTATCATTTAGTAATTC+AGG + chr2.3:6019850-6019869 MS.gene052130:intron 25.0%
! ATTCGTACATAAATTTAAGG+GGG - chr2.3:6021169-6021188 None:intergenic 25.0%
! CAATAAAAACGACACAAATT+TGG - chr2.3:6019631-6019650 None:intergenic 25.0%
! CCAGATCAAAACAATATTTA+AGG - chr2.3:6022300-6022319 None:intergenic 25.0%
! CTTTGATGTTTGATTATCAT+AGG + chr2.3:6022049-6022068 MS.gene052130:CDS 25.0%
! GTAAAGACAACCTTAAAAAA+TGG + chr2.3:6020301-6020320 MS.gene052130:CDS 25.0%
! TAAAATTCTTTGCTACAGTT+TGG - chr2.3:6021809-6021828 None:intergenic 25.0%
! TACTAACTTTGACAAAGTTT+CGG + chr2.3:6020217-6020236 MS.gene052130:intron 25.0%
! TATAAATATCCTACCTTTAC+AGG - chr2.3:6020912-6020931 None:intergenic 25.0%
! TCAAAGAAAGTTGTTGTATT+TGG + chr2.3:6020503-6020522 MS.gene052130:intron 25.0%
! TCTCAAATATATGCAAAAAC+TGG + chr2.3:6020480-6020499 MS.gene052130:intron 25.0%
! TGAAGTTAGTTAATTGTTTG+TGG + chr2.3:6023158-6023177 MS.gene052130:intron 25.0%
! TGCTATCATTTAGTAATTCA+GGG + chr2.3:6019851-6019870 MS.gene052130:intron 25.0%
! TGTACAAGTACAATATCAAA+GGG - chr2.3:6020703-6020722 None:intergenic 25.0%
! TTAAGCTTAAATATAGCAAC+AGG - chr2.3:6022996-6023015 None:intergenic 25.0%
! TTATATGCAATAATAGAGTC+AGG - chr2.3:6020400-6020419 None:intergenic 25.0%
! TTGTACAAGTACAATATCAA+AGG - chr2.3:6020704-6020723 None:intergenic 25.0%
!! ATGTTAAGATTTGTGTCATT+TGG + chr2.3:6020437-6020456 MS.gene052130:intron 25.0%
!! GATACTTTTGTAAATGTTGT+AGG - chr2.3:6021123-6021142 None:intergenic 25.0%
!!! ACAAACCATTTTAGTTCTTT+TGG + chr2.3:6022931-6022950 MS.gene052130:intron 25.0%
!!! CCTTAAATATTGTTTTGATC+TGG + chr2.3:6022297-6022316 MS.gene052130:intron 25.0%
!!! GTGGTTTATTTTTGGTTAAT+TGG + chr2.3:6021612-6021631 MS.gene052130:intron 25.0%
!!! TGTTAAATATAGCTTGTTAG+TGG + chr2.3:6020583-6020602 MS.gene052130:intron 25.0%
!!! TTTTTGGTTAATTGGTTAAG+TGG + chr2.3:6021620-6021639 MS.gene052130:intron 25.0%
AAATACAATCCTGTAAAGGT+AGG + chr2.3:6020900-6020919 MS.gene052130:intron 30.0%
AACCACTAAATTAGACTATC+CGG - chr2.3:6021598-6021617 None:intergenic 30.0%
AACTAAAGATCCGTTCTTAA+AGG - chr2.3:6019786-6019805 None:intergenic 30.0%
AAGAATTTGGAAAATCGCAA+CGG - chr2.3:6019534-6019553 None:intergenic 30.0%
AAGCTTAAACCTCTGAATAA+TGG + chr2.3:6023008-6023027 MS.gene052130:intron 30.0%
AAGTAAATCCTCATTGATAG+AGG + chr2.3:6022116-6022135 MS.gene052130:intron 30.0%
ACTAATACAATGAATGATCC+CGG - chr2.3:6020012-6020031 None:intergenic 30.0%
ACTCTTGAATACCAATGTAT+AGG + chr2.3:6023039-6023058 MS.gene052130:intron 30.0%
ACTTTATTGCTCAAGCAATT+CGG + chr2.3:6022269-6022288 MS.gene052130:CDS 30.0%
AGTTTGGAAATATATGGATG+TGG - chr2.3:6021793-6021812 None:intergenic 30.0%
ATAAAATAACCCAAAGCAAG+TGG - chr2.3:6021898-6021917 None:intergenic 30.0%
ATAATTCACCAACACATTTC+GGG - chr2.3:6019895-6019914 None:intergenic 30.0%
ATCATTTAGTAATTCAGGGA+AGG + chr2.3:6019855-6019874 MS.gene052130:intron 30.0%
ATCCTGTGAAAATCAAGATT+TGG - chr2.3:6021441-6021460 None:intergenic 30.0%
ATGTACATAATCTGAGTTAC+CGG - chr2.3:6021214-6021233 None:intergenic 30.0%
CATAATTCACCAACACATTT+CGG - chr2.3:6019896-6019915 None:intergenic 30.0%
CTACAAATACAATCCTGTAA+AGG + chr2.3:6020896-6020915 MS.gene052130:CDS 30.0%
GAATTATGTACTTTAGTGAG+AGG + chr2.3:6019908-6019927 MS.gene052130:intron 30.0%
GACAACCTTAAAAAATGGAT+TGG + chr2.3:6020306-6020325 MS.gene052130:CDS 30.0%
GATATATTTACTCGAATAGC+TGG + chr2.3:6022420-6022439 MS.gene052130:intron 30.0%
GGATTGTATTTGTAGAAGAT+TGG - chr2.3:6020891-6020910 None:intergenic 30.0%
TATTCATGGATTCTTAGTCA+TGG + chr2.3:6020039-6020058 MS.gene052130:intron 30.0%
TCAAATGGAGATCAACATAA+TGG + chr2.3:6019468-6019487 MS.gene052130:CDS 30.0%
TCAATGAGGATTTACTTGTT+TGG - chr2.3:6022113-6022132 None:intergenic 30.0%
TCATTTAGTAATTCAGGGAA+GGG + chr2.3:6019856-6019875 MS.gene052130:intron 30.0%
TGATTGATCTATCTGTGTAA+TGG + chr2.3:6021238-6021257 MS.gene052130:intron 30.0%
TGCAATGATTACAAACCAAT+AGG - chr2.3:6019831-6019850 None:intergenic 30.0%
TGCTACAGTTTGGAAATATA+TGG - chr2.3:6021799-6021818 None:intergenic 30.0%
TTATGTCTTATGCATGTGAA+TGG - chr2.3:6019936-6019955 None:intergenic 30.0%
TTCGTACATAAATTTAAGGG+GGG - chr2.3:6021168-6021187 None:intergenic 30.0%
TTGGTATTGTAAAGAAACCT+GGG - chr2.3:6022784-6022803 None:intergenic 30.0%
TTTGTACGTAGCTGAAAAAA+TGG - chr2.3:6021717-6021736 None:intergenic 30.0%
! AATCCAAACTTGTGTTTCTA+TGG + chr2.3:6021563-6021582 MS.gene052130:intron 30.0%
! AATTTTTCACAACAGGAGTT+CGG + chr2.3:6021992-6022011 MS.gene052130:intron 30.0%
! ACAATGGGAAACACAAATTT+TGG - chr2.3:6020755-6020774 None:intergenic 30.0%
! ACATCTACTTCAGAAGTATA+TGG + chr2.3:6021468-6021487 MS.gene052130:CDS 30.0%
! TACCAAATCTTGATTTTCAC+AGG + chr2.3:6021436-6021455 MS.gene052130:intron 30.0%
!! AATATGAGAATTTTGGTGAC+CGG + chr2.3:6020090-6020109 MS.gene052130:CDS 30.0%
!!! CTTTTGCACTATTTTGAAAC+TGG + chr2.3:6022509-6022528 MS.gene052130:intron 30.0%
!!! GATGACCAATCCATTTTTTA+AGG - chr2.3:6020314-6020333 None:intergenic 30.0%
!!! TGTCGTTTTTATTGTGTGTT+TGG + chr2.3:6019637-6019656 MS.gene052130:intron 30.0%
AACCGGATAGTCTAATTTAG+TGG + chr2.3:6021593-6021612 MS.gene052130:intron 35.0%
ACAAAAGCAACAGAATTGCT+TGG + chr2.3:6023268-6023287 MS.gene052130:CDS 35.0%
ACATTTCCCCAATAAGTTTC+TGG - chr2.3:6021516-6021535 None:intergenic 35.0%
AGAAACACAAGTTTGGATTG+AGG - chr2.3:6021562-6021581 None:intergenic 35.0%
AGATTTGAGCTAATTCGTCA+CGG + chr2.3:6020336-6020355 MS.gene052130:CDS 35.0%
ATCCACAACCAGAAACTTAT+TGG + chr2.3:6021505-6021524 MS.gene052130:CDS 35.0%
ATGCCATAGAAACACAAGTT+TGG - chr2.3:6021569-6021588 None:intergenic 35.0%
CCAAAATTCTCATATTGGAC+TGG - chr2.3:6020086-6020105 None:intergenic 35.0%
CTAAATTAGACTATCCGGTT+TGG - chr2.3:6021593-6021612 None:intergenic 35.0%
CTTGGTATTGTAAAGAAACC+TGG - chr2.3:6022785-6022804 None:intergenic 35.0%
GAGGATAAGTATGTACCAAT+AGG - chr2.3:6021543-6021562 None:intergenic 35.0%
GATGGAAAATGAGAAAAACG+AGG + chr2.3:6020152-6020171 MS.gene052130:CDS 35.0%
GCAATTCACCTGAAAGAATT+TGG - chr2.3:6019547-6019566 None:intergenic 35.0%
GCTAGAATCTTCAACACATA+TGG + chr2.3:6022208-6022227 MS.gene052130:CDS 35.0%
GGTCACCAAAATTCTCATAT+TGG - chr2.3:6020091-6020110 None:intergenic 35.0%
GTAGCTGATAATTACTTCAC+TGG + chr2.3:6020276-6020295 MS.gene052130:CDS 35.0%
TAATTCACCAACACATTTCG+GGG - chr2.3:6019894-6019913 None:intergenic 35.0%
TCCACAACCAGAAACTTATT+GGG + chr2.3:6021506-6021525 MS.gene052130:CDS 35.0%
TGACGAATTAGCTCAAATCT+CGG - chr2.3:6020336-6020355 None:intergenic 35.0%
TTGGAAATATATGGATGTGG+TGG - chr2.3:6021790-6021809 None:intergenic 35.0%
TTTCCATCAATCTGTCAACA+AGG - chr2.3:6020140-6020159 None:intergenic 35.0%
TTTGATTATCATAGGCAGCA+TGG + chr2.3:6022057-6022076 MS.gene052130:CDS 35.0%
TTTGTAGAAGATTGGAGAAG+CGG - chr2.3:6020883-6020902 None:intergenic 35.0%
! AGATTATGTTTTGCAACCCA+TGG + chr2.3:6021943-6021962 MS.gene052130:intron 35.0%
! CCAGTCCAATATGAGAATTT+TGG + chr2.3:6020083-6020102 MS.gene052130:intron 35.0%
! GCGATTTTCCAAATTCTTTC+AGG + chr2.3:6019536-6019555 MS.gene052130:CDS 35.0%
! TTGCATATATTTGAGACCAG+CGG - chr2.3:6020476-6020495 None:intergenic 35.0%
! TTGCGTTTTCCATTATTCAG+AGG - chr2.3:6023020-6023039 None:intergenic 35.0%
!! AATAAGTTTCTGGTTGTGGA+TGG - chr2.3:6021506-6021525 None:intergenic 35.0%
!! GTGACTAGTCTACTAAATCA+AGG - chr2.3:6022484-6022503 None:intergenic 35.0%
!!! ACTAAATCTTTTGAGGCCAT+GGG - chr2.3:6021962-6021981 None:intergenic 35.0%
!!! TCTGTTGCTTTTGTTATGTC+TGG - chr2.3:6023262-6023281 None:intergenic 35.0%
AACACTATGTTTGTCTGCTC+AGG + chr2.3:6020248-6020267 MS.gene052130:intron 40.0%
AACACTGGTCCAATCAACAT+TGG + chr2.3:6022755-6022774 MS.gene052130:CDS 40.0%
AAGCAACAGAATTGCTTGGA+TGG + chr2.3:6023272-6023291 MS.gene052130:CDS 40.0%
ACACTGGTCCAATCAACATT+GGG + chr2.3:6022756-6022775 MS.gene052130:CDS 40.0%
ACTCACCATTGTAAATCAGC+TGG + chr2.3:6020677-6020696 MS.gene052130:intron 40.0%
AGCAACAGAATTGCTTGGAT+GGG + chr2.3:6023273-6023292 MS.gene052130:CDS 40.0%
ATCAAACTGCTAGTGTCAGT+TGG + chr2.3:6021410-6021429 MS.gene052130:intron 40.0%
ATGAGAAAAACGAGGTTTGC+AGG + chr2.3:6020160-6020179 MS.gene052130:intron 40.0%
ATGCAATAATAGAGTCAGGC+TGG - chr2.3:6020396-6020415 None:intergenic 40.0%
ATTGGAACACTGAACATGCT+TGG + chr2.3:6021320-6021339 MS.gene052130:CDS 40.0%
CACGCATGAATATCGATGAT+GGG + chr2.3:6022233-6022252 MS.gene052130:CDS 40.0%
CCACAACCAGAAACTTATTG+GGG + chr2.3:6021507-6021526 MS.gene052130:CDS 40.0%
CTCTTGAATCTCGATGATTG+AGG + chr2.3:6021866-6021885 MS.gene052130:intron 40.0%
GATTTAACCCCGAAATGTGT+TGG + chr2.3:6019884-6019903 MS.gene052130:intron 40.0%
GGCAATATCCTCTATCAATG+AGG - chr2.3:6022127-6022146 None:intergenic 40.0%
GTTTCTATGGCATTCCAAAC+CGG + chr2.3:6021576-6021595 MS.gene052130:intron 40.0%
TACAAACCAATAGGCAGATC+AGG - chr2.3:6019822-6019841 None:intergenic 40.0%
TATCATAGGCAGCATGGATT+AGG + chr2.3:6022063-6022082 MS.gene052130:CDS 40.0%
TCACCTTGTTGACAGATTGA+TGG + chr2.3:6020134-6020153 MS.gene052130:CDS 40.0%
TGAGAAAAACGAGGTTTGCA+GGG + chr2.3:6020161-6020180 MS.gene052130:intron 40.0%
TGCACATCAATGCTGATCTA+TGG + chr2.3:6022674-6022693 MS.gene052130:intron 40.0%
TGGGGAAATGTCAATCCTAT+TGG + chr2.3:6021525-6021544 MS.gene052130:CDS 40.0%
TTCTTTCCTGATCTGCCTAT+TGG + chr2.3:6019813-6019832 MS.gene052130:intron 40.0%
TTGGAACACTGAACATGCTT+GGG + chr2.3:6021321-6021340 MS.gene052130:CDS 40.0%
TTGTAGAAGATTGGAGAAGC+GGG - chr2.3:6020882-6020901 None:intergenic 40.0%
TTTCTGCTATGTCTCTGACA+TGG + chr2.3:6022611-6022630 MS.gene052130:CDS 40.0%
! AAGCCTTTTAGACAGTTCAC+AGG - chr2.3:6020950-6020969 None:intergenic 40.0%
! AGCCTTTTAGACAGTTCACA+GGG - chr2.3:6020949-6020968 None:intergenic 40.0%
! ATGGCGTCGAATTCATCAAA+TGG + chr2.3:6019453-6019472 MS.gene052130:CDS 40.0%
! CTTGTTTGGTGAAGCAAACA+TGG - chr2.3:6022099-6022118 None:intergenic 40.0%
! TCCTCTTTCGCCTTTAAGAA+CGG + chr2.3:6019773-6019792 MS.gene052130:intron 40.0%
!! TGAACTTGCTGAGAATGTGA+AGG + chr2.3:6022899-6022918 MS.gene052130:CDS 40.0%
!!! CACTAAATCTTTTGAGGCCA+TGG - chr2.3:6021963-6021982 None:intergenic 40.0%
AAACTGCGAGTTTGTGTTCC+TGG - chr2.3:6022594-6022613 None:intergenic 45.0%
AATCCTCTTCCATAAGCGGA+AGG - chr2.3:6023324-6023343 None:intergenic 45.0%
ACCAATAAAACCAGCTCCTC+CGG - chr2.3:6020112-6020131 None:intergenic 45.0%
ACCATCTTTATCTCCACAGC+TGG - chr2.3:6023205-6023224 None:intergenic 45.0%
AGATGTGACAGAGACACTGT+TGG + chr2.3:6020824-6020843 MS.gene052130:intron 45.0%
AGCATGCAACAGAAGCTTGT+TGG + chr2.3:6020621-6020640 MS.gene052130:intron 45.0%
AGTTCGGAGTTGCTATGATG+AGG + chr2.3:6022008-6022027 MS.gene052130:CDS 45.0%
ATTGCTTGGATGGGAACCAA+AGG + chr2.3:6023282-6023301 MS.gene052130:CDS 45.0%
CACTGACACATTTCCATGTC+GGG + chr2.3:6020984-6021003 MS.gene052130:intron 45.0%
CCACGCATGAATATCGATGA+TGG + chr2.3:6022232-6022251 MS.gene052130:CDS 45.0%
CCATCATCGATATTCATGCG+TGG - chr2.3:6022235-6022254 None:intergenic 45.0%
CCTGGAAGTTGGACTGTTAA+GGG - chr2.3:6022576-6022595 None:intergenic 45.0%
CGCTGCACATAAGTATCACT+TGG - chr2.3:6022803-6022822 None:intergenic 45.0%
CGGAAATCCTCTTCCATAAG+CGG - chr2.3:6023328-6023347 None:intergenic 45.0%
CTCATGGAAGGAGAAAACAC+TGG + chr2.3:6022740-6022759 MS.gene052130:CDS 45.0%
CTGGTTGTGGATGGATAAGA+GGG - chr2.3:6021497-6021516 None:intergenic 45.0%
GAAATGTGTCAGTGCTACAG+AGG - chr2.3:6020978-6020997 None:intergenic 45.0%
GACCCTGTGAACTGTCTAAA+AGG + chr2.3:6020944-6020963 MS.gene052130:intron 45.0%
GAGTTTGTGTTCCTGGAAGT+TGG - chr2.3:6022587-6022606 None:intergenic 45.0%
GCAGCTTATTAATCCAGCTG+TGG + chr2.3:6023189-6023208 MS.gene052130:intron 45.0%
GTGTCTCTGTCACATCTACT+CGG - chr2.3:6020821-6020840 None:intergenic 45.0%
GTTCGGAGTTGCTATGATGA+GGG + chr2.3:6022009-6022028 MS.gene052130:CDS 45.0%
TAACCCAAAGCAAGTGGCAA+AGG - chr2.3:6021892-6021911 None:intergenic 45.0%
TAAGGGGGGAGACAAAGAAA+GGG - chr2.3:6021154-6021173 None:intergenic 45.0%
TCCAGCTGTGGAGATAAAGA+TGG + chr2.3:6023201-6023220 MS.gene052130:CDS 45.0%
TCCGTTCTTAAAGGCGAAAG+AGG - chr2.3:6019777-6019796 None:intergenic 45.0%
TCCTGGAAGTTGGACTGTTA+AGG - chr2.3:6022577-6022596 None:intergenic 45.0%
TCTGGTTGTGGATGGATAAG+AGG - chr2.3:6021498-6021517 None:intergenic 45.0%
TGGAAGAGGATTTCCGTCTA+AGG + chr2.3:6023332-6023351 MS.gene052130:CDS 45.0%
TGTAGAAGATTGGAGAAGCG+GGG - chr2.3:6020881-6020900 None:intergenic 45.0%
TGTCTCTGTCACATCTACTC+GGG - chr2.3:6020820-6020839 None:intergenic 45.0%
TTAAGGGGGGAGACAAAGAA+AGG - chr2.3:6021155-6021174 None:intergenic 45.0%
TTCTTTGCCGAGGATCATCA+GGG - chr2.3:6023237-6023256 None:intergenic 45.0%
TTGGAAAATCGCAACGGAGA+TGG - chr2.3:6019528-6019547 None:intergenic 45.0%
TTTCTTTGCCGAGGATCATC+AGG - chr2.3:6023238-6023257 None:intergenic 45.0%
! AAGGGCCAGCTGATTTACAA+TGG - chr2.3:6020685-6020704 None:intergenic 45.0%
! ACTTGCTGAGAATGTGAAGG+AGG + chr2.3:6022902-6022921 MS.gene052130:CDS 45.0%
! AGGATTTCCGTCTAAGGCTT+GGG + chr2.3:6023338-6023357 MS.gene052130:CDS 45.0%
! CACTGTTGGTTGAGGTTGAT+CGG + chr2.3:6020838-6020857 MS.gene052130:CDS 45.0%
! CAGTGTTTTCTCCTTCCATG+AGG - chr2.3:6022742-6022761 None:intergenic 45.0%
! GCACTGACACATTTCCATGT+CGG + chr2.3:6020983-6021002 MS.gene052130:intron 45.0%
!! ATGAGAATTTTGGTGACCGG+AGG + chr2.3:6020093-6020112 MS.gene052130:CDS 45.0%
!! CCCCAATAAGTTTCTGGTTG+TGG - chr2.3:6021510-6021529 None:intergenic 45.0%
!! CTTGTTGTTGTGTGTTGCAG+TGG + chr2.3:6022546-6022565 MS.gene052130:intron 45.0%
!! TGATTACCAGAGCACTGTTG+TGG + chr2.3:6019986-6020005 MS.gene052130:intron 45.0%
!!! ATGTCTGGTTTTCTTTGCCG+AGG - chr2.3:6023247-6023266 None:intergenic 45.0%
!! ATGAAAAAAAAAAAAAAAAT+TGG - chr2.3:6022148-6022167 None:intergenic 5.0%
!!! TTATATTTTTAATATGTATT+AGG + chr2.3:6022700-6022719 MS.gene052130:intron 5.0%
AAAATCGCAACGGAGATGGC+AGG - chr2.3:6019524-6019543 None:intergenic 50.0%
AAATCGCAACGGAGATGGCA+GGG - chr2.3:6019523-6019542 None:intergenic 50.0%
AGAACACCCCTGATGATCCT+CGG + chr2.3:6023227-6023246 MS.gene052130:CDS 50.0%
CCAATCAACATTGGGAACCC+AGG + chr2.3:6022764-6022783 MS.gene052130:CDS 50.0%
CCCTTAACAGTCCAACTTCC+AGG + chr2.3:6022573-6022592 MS.gene052130:CDS 50.0%
CCTGGGTTCCCAATGTTGAT+TGG - chr2.3:6022767-6022786 None:intergenic 50.0%
CGACACAGACACATTGACAC+CGG - chr2.3:6021071-6021090 None:intergenic 50.0%
CTCCTTCCATGAGGCGAATT+AGG - chr2.3:6022733-6022752 None:intergenic 50.0%
GTCTCTGTCACATCTACTCG+GGG - chr2.3:6020819-6020838 None:intergenic 50.0%
TCTTTGCCGAGGATCATCAG+GGG - chr2.3:6023236-6023255 None:intergenic 50.0%
TGATGGCCTAATTCGCCTCA+TGG + chr2.3:6022724-6022743 MS.gene052130:CDS 50.0%
TGGTTGTACGTTACTTCCGC+TGG + chr2.3:6020457-6020476 MS.gene052130:intron 50.0%
! AAAGCGAGTTGGAGCAAGGT+CGG + chr2.3:6021349-6021368 MS.gene052130:intron 50.0%
! AGGCCTTTGCCACTTGCTTT+GGG + chr2.3:6021886-6021905 MS.gene052130:intron 50.0%
! CGGTGTCAATGTGTCTGTGT+CGG + chr2.3:6021069-6021088 MS.gene052130:intron 50.0%
! GACAGAGACACTGTTGGTTG+AGG + chr2.3:6020830-6020849 MS.gene052130:CDS 50.0%
! GAGGATTTCCGTCTAAGGCT+TGG + chr2.3:6023337-6023356 MS.gene052130:CDS 50.0%
! GGATTTCCGTCTAAGGCTTG+GGG + chr2.3:6023339-6023358 MS.gene052130:CDS 50.0%
! TTGCAAAGCGAGTTGGAGCA+AGG + chr2.3:6021345-6021364 MS.gene052130:CDS 50.0%
!!! ACCGGAGGAGCTGGTTTTAT+TGG + chr2.3:6020108-6020127 MS.gene052130:CDS 50.0%
AATCGCAACGGAGATGGCAG+GGG - chr2.3:6019522-6019541 None:intergenic 55.0%
AGGCGAAAGAGGAAGCTCAC+AGG - chr2.3:6019766-6019785 None:intergenic 55.0%
CCATCGCGCAACTTGACCTT+TGG - chr2.3:6023301-6023320 None:intergenic 55.0%
CTATGATGAGGGCAAGCGTG+TGG + chr2.3:6022020-6022039 MS.gene052130:CDS 55.0%
CTTGGGCTTGCAAAGCGAGT+TGG + chr2.3:6021338-6021357 MS.gene052130:CDS 55.0%
GGCCTAATTCGCCTCATGGA+AGG + chr2.3:6022728-6022747 MS.gene052130:CDS 55.0%
TGGCCTTCCGCTTATGGAAG+AGG + chr2.3:6023318-6023337 MS.gene052130:CDS 55.0%
TGGGAACCCCAAGCCTTAGA+CGG - chr2.3:6023348-6023367 None:intergenic 55.0%
! ACGTGTGTCGTTGTCGTGTC+GGG - chr2.3:6021013-6021032 None:intergenic 55.0%
! CACGTGTGTCGTTGTCGTGT+CGG - chr2.3:6021014-6021033 None:intergenic 55.0%
! CCAAAGGTCAAGTTGCGCGA+TGG + chr2.3:6023298-6023317 MS.gene052130:CDS 55.0%
! GAGGCCTTTGCCACTTGCTT+TGG + chr2.3:6021885-6021904 MS.gene052130:intron 55.0%
!! ATTTTGGTGACCGGAGGAGC+TGG + chr2.3:6020099-6020118 MS.gene052130:CDS 55.0%
!! TACCAGAGCACTGTTGTGGC+CGG + chr2.3:6019990-6020009 MS.gene052130:intron 55.0%
GAAGATTGGAGAAGCGGGGC+AGG - chr2.3:6020877-6020896 None:intergenic 60.0%
! CGTGTGTCGTTGTCGTGTCG+GGG - chr2.3:6021012-6021031 None:intergenic 60.0%
!! ACCAGAGCACTGTTGTGGCC+GGG + chr2.3:6019991-6020010 MS.gene052130:intron 60.0%
GAGAAGCGGGGCAGGCAAGA+TGG - chr2.3:6020869-6020888 None:intergenic 65.0%
GCGCGATGGCCTTCCGCTTA+TGG + chr2.3:6023312-6023331 MS.gene052130:CDS 65.0%
TCCCGGCCACAACAGTGCTC+TGG - chr2.3:6019995-6020014 None:intergenic 65.0%
CGCAACGGAGATGGCAGGGG+AGG - chr2.3:6019519-6019538 None:intergenic 70.0%
! TCGTGTCGGGGCGCCCGACA+TGG - chr2.3:6021000-6021019 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 6019453 6023378 6019453 ID=MS.gene052130
chr2.3 mRNA 6019453 6023378 6019453 ID=MS.gene052130.t1;Parent=MS.gene052130
chr2.3 exon 6019453 6019557 6019453 ID=MS.gene052130.t1.exon1;Parent=MS.gene052130.t1
chr2.3 CDS 6019453 6019557 6019453 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6020087 6020173 6020087 ID=MS.gene052130.t1.exon2;Parent=MS.gene052130.t1
chr2.3 CDS 6020087 6020173 6020087 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6020270 6020357 6020270 ID=MS.gene052130.t1.exon3;Parent=MS.gene052130.t1
chr2.3 CDS 6020270 6020357 6020270 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6020826 6020917 6020826 ID=MS.gene052130.t1.exon4;Parent=MS.gene052130.t1
chr2.3 CDS 6020826 6020917 6020826 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6021302 6021366 6021302 ID=MS.gene052130.t1.exon5;Parent=MS.gene052130.t1
chr2.3 CDS 6021302 6021366 6021302 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6021458 6021546 6021458 ID=MS.gene052130.t1.exon6;Parent=MS.gene052130.t1
chr2.3 CDS 6021458 6021546 6021458 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6022007 6022084 6022007 ID=MS.gene052130.t1.exon7;Parent=MS.gene052130.t1
chr2.3 CDS 6022007 6022084 6022007 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6022197 6022290 6022197 ID=MS.gene052130.t1.exon8;Parent=MS.gene052130.t1
chr2.3 CDS 6022197 6022290 6022197 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6022566 6022632 6022566 ID=MS.gene052130.t1.exon9;Parent=MS.gene052130.t1
chr2.3 CDS 6022566 6022632 6022566 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6022722 6022785 6022722 ID=MS.gene052130.t1.exon10;Parent=MS.gene052130.t1
chr2.3 CDS 6022722 6022785 6022722 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6022883 6022923 6022883 ID=MS.gene052130.t1.exon11;Parent=MS.gene052130.t1
chr2.3 CDS 6022883 6022923 6022883 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
chr2.3 exon 6023193 6023378 6023193 ID=MS.gene052130.t1.exon12;Parent=MS.gene052130.t1
chr2.3 CDS 6023193 6023378 6023193 ID=cds.MS.gene052130.t1;Parent=MS.gene052130.t1
Gene Sequence

>MS.gene052130

ATGGCGTCGAATTCATCAAATGGAGATCAACATAATGGAGATCAACAGACAACAACAAAGCAACCTCCCCTGCCATCTCCGTTGCGATTTTCCAAATTCTTTCAGGTGAATTGCTGCATGATTGCATTTATTCATGCCGTTTTGTCATTTTGATTGTTTCTTGAATCATGTTTTGCCAAATTTGTGTCGTTTTTATTGTGTGTTTGGTGCATTGTTTTATTTTGACACTGATAATGTTGAATTTGATAATGTTGAATTTGATTCTGACATGTAAAGCATAAATTGTGCATCAGATGATTACTCAGTTGTGCCTGTGAGCTTCCTCTTTCGCCTTTAAGAACGGATCTTTAGTTTTTTTTTTTCTTTCCTGATCTGCCTATTGGTTTGTAATCATTGCATGCTATCATTTAGTAATTCAGGGAAGGGTATCAGATTTAACCCCGAAATGTGTTGGTGAATTATGTACTTTAGTGAGAGGATCCATTCACATGCATAAGACATAACATCGTATTATCTCACAATCAAAAAGTTTGTGATTACCAGAGCACTGTTGTGGCCGGGATCATTCATTGTATTAGTTATTTCTTATTCATGGATTCTTAGTCATGGTTTTTTCATTTCATTCTTGAACCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTTTGCAGGGCTTATTTCTTTCTGTGTATTTAGTATTCAAGTTTACTAACTTTGACAAAGTTTCGGTACAACATAACACTATGTTTGTCTGCTCAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCACGGTATAATTTCTTCAGTTTTTCTATCACAATCATCTCCAGCCTGACTCTATTATTGCATATAAGATGAAATTTGAAATTGATGTTAAGATTTGTGTCATTTGGTTGTACGTTACTTCCGCTGGTCTCAAATATATGCAAAAACTGGTCAAAGAAAGTTGTTGTATTTGGACAAAATACATCAACTTCTTTGACCAATTTTTTCTTATAAGTATAAAGTATTTGGGGTGTTAAATATAGCTTGTTAGTGGTCTTAAAAACTATGAAGCATGCAACAGAAGCTTGTTGGTTATAAAATAAGATATTAAACTGACTACAAATCACTCACCATTGTAAATCAGCTGGCCCTTTGATATTGTACTTGTACAACACTAATGATGATGCTTCTTCATGAGCACCAAAATTTGTGTTTCCCATTGTTTTTAATAAACTATAGACCTCAACATTCATTTCTGTTTTTTCCCCGAGTAGATGTGACAGAGACACTGTTGGTTGAGGTTGATCGGATCTACCATCTTGCCTGCCCCGCTTCTCCAATCTTCTACAAATACAATCCTGTAAAGGTAGGATATTTATAGTCTGTATACATGACCCTGTGAACTGTCTAAAAGGCTTTATTGCCTCTGTAGCACTGACACATTTCCATGTCGGGCGCCCCGACACGACAACGACACACGTGATTACGTTCAACTAATTCATTTTTCAAATTTTTACCGGTGTCAATGTGTCTGTGTCGGTGTTTCATAGCTTATTTATTGCTTGCTACCTACAACATTTACAAAAGTATCTTACAGAACCCTTTCTTTGTCTCCCCCCTTAAATTTATGTACGAATTTTATCATTATTATTATTATATCCGGTAACTCAGATTATGTACATTTGTTGATTGATCTATCTGTGTAATGGACCTTTCAAATTATCTAACATTCAAAGGATTAACTTTACAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGTCGGAAATTTTTTCTTTTCTTTTTTTAAATATTTTGTTGATAATCAAACTGCTAGTGTCAGTTGGTTTTACCAAATCTTGATTTTCACAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTATTGGGGAAATGTCAATCCTATTGGTACATACTTATCCTCAATCCAAACTTGTGTTTCTATGGCATTCCAAACCGGATAGTCTAATTTAGTGGTTTATTTTTGGTTAATTGGTTAAGTGGATTTACAATATCATTTAGTTTTTATAATTCAAAGCAACATGTCTTTTTCGAAAATGTTTTTAATGGACAAACCATTTTTTCAGCTACGTACAAAGCTAAACATTTGAATATATGTTCTCTTTGAATTATATTTTTAAAATAAGACCACCACATCCATATATTTCCAAACTGTAGCAAAGAATTTTAATTTTTTAAGAGATGTCATTTCTTTTGAAGTTTTAGTCTCTTGAATCTCGATGATTGAGGCCTTTGCCACTTGCTTTGGGTTATTTTATATTAACAGTCCTCTTCAAACAAAAAAGATTATGTTTTGCAACCCATGGCCTCAAAAGATTTAGTGTAATTTAAGAATTTTTCACAACAGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGGTAATGTTATGCCATGTTTGCTTCACCAAACAAGTAAATCCTCATTGATAGAGGATATTGCCAATTTTTTTTTTTTTTTTCATCTTTTGTTAACTGGACAATATTTTCACAGAAATACGCATTGCTAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCAATTCGGTAAGTCCTTAAATATTGTTTTGATCTGGTTGACTAAAATAATTTCTATGAGAAAATTACGTAACAGATGTACTGTTAACTCTTATGAAAAGAAAATATATACTGTAAACTTGGTCTTTATAAACAACAGATATATTTACTCGAATAGCTGGTTGTTTATCTGTTAAATTACGAGTCATTGATCTGAATACCTTGATTTAGTAGACTAGTCACAATTTCTTTTGCACTATTTTGAAACTGGATTCTTAACTGTTACTTGTTGTTGTGTGTTGCAGTGGTGAGCCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTATATATGAAGCGTTGCTCATTGTGTTTTGCTTTTAGATTTGCACATCAATGCTGATCTATGGTTGTTATATTTTTAATATGTATTAGGTTGATGGCCTAATTCGCCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTTTCTTTACAATACCAAGTGATACTTATGTGCAGCGTATGCTTTTTTATTCTTCTGTTGTACTTGTTTGAATTGATTATTTGTATTATTCTTTCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGGTCAGTTACAAACCATTTTAGTTCTTTTGGAATGTCAAATACGTCTCTTTATCTTAGTATTGTTATATTCCTGTTGCTATATTTAAGCTTAAACCTCTGAATAATGGAAAACGCAACTCTTGAATACCAATGTATAGGTCTTATATTTTACGATGAATTGTATATTATATGCATTTTACTAACTACGTGTAACGTAACTTTGTGATTTAATAATAGAGATTTATGTGAATTATTTGAAGTTAGTTAATTGTTTGTGGATGATTTTGCAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGCGATGGCCTTCCGCTTATGGAAGAGGATTTCCGTCTAAGGCTTGGGGTTCCCAGAAAGAACTAA
Protein sequence

>MS.gene052130.t1

MASNSSNGDQHNGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN