AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45481

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45481.t1 MTR_2g096660 99.715 351 1 0 1 351 1 351 0.0 727
MS.gene45481.t1 MTR_4g063600 90.000 350 29 1 1 350 1 344 0.0 655
MS.gene45481.t1 MTR_4g063600 89.143 350 29 2 1 350 1 341 0.0 644
MS.gene45481.t1 MTR_4g120030 70.846 319 87 2 27 345 100 412 4.16e-163 462
MS.gene45481.t1 MTR_1g088480 71.704 311 82 2 35 345 115 419 3.08e-161 458
MS.gene45481.t1 MTR_1g067530 62.941 340 93 2 38 345 112 450 1.35e-148 427
MS.gene45481.t1 MTR_1g107455 30.659 349 188 12 38 334 19 365 2.41e-31 122
MS.gene45481.t1 MTR_4g056100 29.395 347 195 11 38 334 19 365 5.65e-31 121
MS.gene45481.t1 MTR_4g053420 28.613 346 196 11 38 334 14 357 8.25e-31 120
MS.gene45481.t1 MTR_7g115080 27.143 350 222 10 1 336 1 331 1.89e-28 114
MS.gene45481.t1 MTR_7g115080 27.299 348 220 10 1 334 14 342 2.14e-28 114
MS.gene45481.t1 MTR_7g115080 27.143 350 222 10 1 336 35 365 2.38e-28 114
MS.gene45481.t1 MTR_2g073240 30.892 314 188 10 40 334 21 324 2.79e-27 113
MS.gene45481.t1 MTR_1g108530 28.916 332 198 11 38 334 19 347 5.61e-27 110
MS.gene45481.t1 MTR_4g056100 30.420 286 162 9 38 286 19 304 1.15e-26 107
MS.gene45481.t1 MTR_0034s0060 29.936 314 191 10 40 334 139 442 1.20e-25 108
MS.gene45481.t1 MTR_1g080950 28.662 314 199 11 38 336 28 331 5.60e-25 104
MS.gene45481.t1 MTR_1g080950 28.662 314 199 11 38 336 64 367 7.55e-25 104
MS.gene45481.t1 MTR_1g009600 28.660 321 202 9 40 342 7 318 8.81e-25 105
MS.gene45481.t1 MTR_4g056100 29.502 261 151 7 38 265 19 279 2.47e-23 98.2
MS.gene45481.t1 MTR_4g129820 26.567 335 200 13 35 334 92 415 5.01e-19 88.2
MS.gene45481.t1 MTR_5g011940 26.667 330 204 12 36 334 88 410 7.41e-18 84.7
MS.gene45481.t1 MTR_2g032100 25.217 345 205 12 20 324 53 384 4.28e-17 82.4
MS.gene45481.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene45481.t1 MTR_8g089180 24.927 341 217 9 20 327 53 387 7.83e-17 81.6
MS.gene45481.t1 MTR_3g084090 25.758 330 199 13 40 334 101 419 2.82e-16 80.1
MS.gene45481.t1 MTR_4g024600 24.324 333 210 12 35 334 98 421 1.39e-14 74.7
MS.gene45481.t1 MTR_8g099535 26.970 330 203 13 36 332 2 326 1.59e-14 73.9
MS.gene45481.t1 MTR_4g102270 25.758 330 207 13 36 334 91 413 2.04e-14 74.3
MS.gene45481.t1 MTR_8g096880 24.620 329 206 13 35 327 3 325 5.18e-13 69.7
MS.gene45481.t1 MTR_5g009160 26.061 330 206 13 36 332 2 326 1.07e-12 68.6
MS.gene45481.t1 MTR_8g096880 24.465 327 205 13 35 325 3 323 1.44e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45481.t1 AT5G59290 90.476 336 32 0 14 349 21 356 0.0 629
MS.gene45481.t1 AT2G28760 86.857 350 39 1 1 350 32 374 0.0 629
MS.gene45481.t1 AT5G59290 90.476 336 32 0 14 349 6 341 0.0 628
MS.gene45481.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene45481.t1 AT3G46440 90.774 336 31 0 12 347 3 338 0.0 627
MS.gene45481.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene45481.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene45481.t1 AT2G28760 86.857 350 39 1 1 350 1 343 0.0 627
MS.gene45481.t1 AT5G59290 92.332 313 24 0 37 349 22 334 0.0 609
MS.gene45481.t1 AT5G59290 92.308 312 24 0 38 349 1 312 0.0 608
MS.gene45481.t1 AT2G47650 73.377 308 81 1 38 345 121 427 2.80e-165 469
MS.gene45481.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene45481.t1 AT3G62830 72.347 311 85 1 35 345 116 425 1.03e-164 468
MS.gene45481.t1 AT2G47650 71.975 314 81 2 38 345 121 433 7.18e-163 463
MS.gene45481.t1 AT3G53520 71.061 311 89 1 35 345 117 426 7.76e-163 462
MS.gene45481.t1 AT3G53520 70.740 311 88 2 35 345 117 424 5.14e-160 455
MS.gene45481.t1 AT3G53520 64.583 336 91 3 35 345 117 449 1.64e-152 437
MS.gene45481.t1 AT3G53520 75.225 222 54 1 35 256 117 337 6.00e-119 348
MS.gene45481.t1 AT1G08200 30.836 347 190 12 38 334 18 364 2.50e-33 127
MS.gene45481.t1 AT2G27860 30.548 347 191 12 38 334 18 364 3.50e-32 124
MS.gene45481.t1 AT1G53500 30.032 313 192 9 40 334 11 314 4.79e-28 115
MS.gene45481.t1 AT1G78570 30.032 313 192 9 40 334 9 312 3.39e-27 113
MS.gene45481.t1 AT3G14790 30.032 313 192 9 40 334 9 312 9.30e-27 111
MS.gene45481.t1 AT3G14790 30.032 313 192 9 40 334 12 315 1.01e-26 111
MS.gene45481.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene45481.t1 AT5G28840 28.571 315 200 11 37 336 27 331 7.51e-24 101
MS.gene45481.t1 AT2G28755 70.175 57 17 0 254 310 4 60 4.80e-21 85.9
MS.gene45481.t1 AT4G20460 25.294 340 213 10 22 327 54 386 2.86e-19 88.6
MS.gene45481.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene45481.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene45481.t1 AT5G44480 25.723 346 203 12 30 334 63 395 3.32e-19 88.6
MS.gene45481.t1 AT5G44480 25.723 346 203 12 30 334 87 419 5.11e-19 88.2
MS.gene45481.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene45481.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene45481.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene45481.t1 AT1G30620 25.439 342 214 10 20 327 53 387 1.86e-17 83.6
MS.gene45481.t1 AT1G30620 25.731 342 213 10 20 327 52 386 4.25e-17 82.4
MS.gene45481.t1 AT2G45310 24.566 346 215 12 24 334 83 417 1.15e-16 81.3
MS.gene45481.t1 AT4G00110 24.545 330 203 12 40 334 93 411 6.47e-15 75.9
MS.gene45481.t1 AT1G73250 24.684 316 210 7 31 334 10 309 2.75e-14 73.2
MS.gene45481.t1 AT4G12250 25.301 332 208 13 35 334 93 416 1.09e-13 72.0
MS.gene45481.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene45481.t1 AT1G17890 23.511 319 210 10 31 334 5 304 1.31e-11 65.1
MS.gene45481.t1 AT1G17890 23.511 319 210 10 31 334 13 312 1.67e-11 65.1

Find 95 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTATTTAGTTCTTTC+TGG 0.093558 2.1:-6977799 None:intergenic
GCAATTCACCTGAAAGAATT+TGG 0.163974 2.1:-6974004 None:intergenic
ACATTTCCCCAATAAGTTTC+TGG 0.179736 2.1:-6975965 None:intergenic
TATAAATATCCTACCTTTAC+AGG 0.215426 2.1:-6975362 None:intergenic
ATCCACAACCAGAAACTTAT+TGG 0.241528 2.1:+6975957 MS.gene45481:CDS
GCGTGATGGCCTTCCTCTTA+TGG 0.270618 2.1:+6977746 MS.gene45481:CDS
ACAATAAAGACTAATGTAAT+TGG 0.274753 2.1:+6975751 MS.gene45481:CDS
CCAGTCCAATATGAGAATTT+TGG 0.274767 2.1:+6974536 MS.gene45481:intron
TTTAATATGTATTAGGTTGA+TGG 0.307326 2.1:+6977143 MS.gene45481:intron
CCTGGAAGTTGGACTGTTAA+GGG 0.329431 2.1:-6977009 None:intergenic
AAACTGCGAGTTTGTGTTCC+TGG 0.333294 2.1:-6977027 None:intergenic
TCACCTTGTTGACAGATTGA+TGG 0.336356 2.1:+6974587 MS.gene45481:CDS
TCCTGGAAGTTGGACTGTTA+AGG 0.339907 2.1:-6977010 None:intergenic
CTCCTTCCATGAGGCGAATT+AGG 0.346004 2.1:-6977166 None:intergenic
TGGAAGAGGATTTCCGTCTA+AGG 0.354083 2.1:+6977766 MS.gene45481:CDS
TCCACAACCAGAAACTTATT+GGG 0.354322 2.1:+6975958 MS.gene45481:CDS
GGATTGTATTTGTAGAAGAT+TGG 0.356058 2.1:-6975341 None:intergenic
AGGATTTCCGTCTAAGGCTT+GGG 0.356905 2.1:+6977772 MS.gene45481:CDS
CCCTTAACAGTCCAACTTCC+AGG 0.358179 2.1:+6977009 MS.gene45481:CDS
CCCCAATAAGTTTCTGGTTG+TGG 0.359244 2.1:-6975959 None:intergenic
CCATCACGCAACTTGACCTT+TGG 0.360467 2.1:-6977732 None:intergenic
TTTCTTTGCCGAGGATCATC+AGG 0.362452 2.1:-6977669 None:intergenic
TGGGGAAATGTCAATCCTAT+TGG 0.373968 2.1:+6975977 MS.gene45481:CDS
AACTTTATTTAGTTCTTTCT+GGG 0.379408 2.1:-6977798 None:intergenic
CCTGGGTTCCCAATGTTGAT+TGG 0.380574 2.1:-6977200 None:intergenic
TATCATAGGCAGCATGGATT+AGG 0.389706 2.1:+6976504 MS.gene45481:CDS
ACATCTACTTCAGAAGTATA+TGG 0.391713 2.1:+6975920 MS.gene45481:CDS
GGTCACCAAAATTCTCATAT+TGG 0.401935 2.1:-6974541 None:intergenic
TCAAATGGAGATCAACATAA+TGG 0.401989 2.1:+6973928 MS.gene45481:CDS
CTTTGATGTTTGATTATCAT+AGG 0.405550 2.1:+6976490 MS.gene45481:CDS
TCCATATGTGTTGAAGATTC+TGG 0.412764 2.1:-6976645 None:intergenic
TCTGGTTGTGGATGGATAAG+AGG 0.414750 2.1:-6975947 None:intergenic
CGGAAATCCTCTTCCATAAG+AGG 0.416548 2.1:-6977759 None:intergenic
GCCAGAATCTTCAACACATA+TGG 0.426855 2.1:+6976644 MS.gene45481:CDS
TTGGAACACTGAACATGCTT+GGG 0.433117 2.1:+6975770 MS.gene45481:CDS
ACCAATAAAACCAGCTCCTC+CGG 0.437691 2.1:-6974562 None:intergenic
GAGGATTTCCGTCTAAGGCT+TGG 0.451269 2.1:+6977771 MS.gene45481:CDS
ACTTTATTGCTCAAGCAATT+CGG 0.455967 2.1:+6976705 MS.gene45481:CDS
CACTGTTGGTTGAGGTTGAT+CGG 0.459878 2.1:+6975291 MS.gene45481:CDS
GTAGCTGATAATTACTTCAC+TGG 0.462377 2.1:+6974728 MS.gene45481:CDS
ACCATCTTTATCTCCACAGC+TGG 0.464169 2.1:-6977636 None:intergenic
TTGTAGAAGATTGGAGAAGC+AGG 0.479045 2.1:-6975332 None:intergenic
CTTGGGCTTGCAAAGCGAGT+TGG 0.491265 2.1:+6975787 MS.gene45481:CDS
AAGCAACAGAATTGCTTGGA+TGG 0.498380 2.1:+6977706 MS.gene45481:CDS
GAAGATTGGAGAAGCAGGGC+AGG 0.498863 2.1:-6975327 None:intergenic
CCACGCATGAATATCGATGA+TGG 0.501885 2.1:+6976668 MS.gene45481:CDS
GAGAAGCAGGGCAGGCGAGA+TGG 0.512598 2.1:-6975319 None:intergenic
ATGGCGTCGAATTCATCAAA+TGG 0.515385 2.1:+6973913 MS.gene45481:CDS
ATTGGAACACTGAACATGCT+TGG 0.517074 2.1:+6975769 MS.gene45481:CDS
ACACTGGTCCAATCAACATT+GGG 0.518433 2.1:+6977192 MS.gene45481:CDS
AATAAGTTTCTGGTTGTGGA+TGG 0.522152 2.1:-6975955 None:intergenic
CTACAAATACAATCCTGTAA+AGG 0.522717 2.1:+6975349 MS.gene45481:CDS
TTGGAAAATCGCAACGGAGA+TGG 0.523155 2.1:-6973985 None:intergenic
AAAATCGCAACGGAGATGGC+AGG 0.524114 2.1:-6973981 None:intergenic
TGGCCTTCCTCTTATGGAAG+AGG 0.525475 2.1:+6977752 MS.gene45481:CDS
ACAAAAGCAACAGAATTGCT+TGG 0.526474 2.1:+6977702 MS.gene45481:CDS
AGCAACAGAATTGCTTGGAT+GGG 0.536467 2.1:+6977707 MS.gene45481:CDS
CGCAACGGAGATGGCAGGGG+AGG 0.538853 2.1:-6973976 None:intergenic
AACACTGGTCCAATCAACAT+TGG 0.539937 2.1:+6977191 MS.gene45481:CDS
TGATGGCCTAATTCGCCTCA+TGG 0.540095 2.1:+6977160 MS.gene45481:CDS
CTGGTTGTGGATGGATAAGA+GGG 0.540478 2.1:-6975946 None:intergenic
TGTAGAAGATTGGAGAAGCA+GGG 0.544155 2.1:-6975331 None:intergenic
GAGTTTGTGTTCCTGGAAGT+TGG 0.549267 2.1:-6977020 None:intergenic
AATCGCAACGGAGATGGCAG+GGG 0.551999 2.1:-6973979 None:intergenic
GGCCTAATTCGCCTCATGGA+AGG 0.552535 2.1:+6977164 MS.gene45481:CDS
TTTGATTATCATAGGCAGCA+TGG 0.553866 2.1:+6976498 MS.gene45481:CDS
AAATCGCAACGGAGATGGCA+GGG 0.556402 2.1:-6973980 None:intergenic
TTCTTTGCCGAGGATCATCA+GGG 0.558934 2.1:-6977668 None:intergenic
TGGGAACCCCAAGCCTTAGA+CGG 0.568610 2.1:-6977779 None:intergenic
GGATTTCCGTCTAAGGCTTG+GGG 0.572674 2.1:+6977773 MS.gene45481:CDS
CCAATCAACATTGGGAACCC+AGG 0.578663 2.1:+6977200 MS.gene45481:CDS
CACGCATGAATATCGATGAT+GGG 0.584892 2.1:+6976669 MS.gene45481:CDS
GACAGAGACACTGTTGGTTG+AGG 0.589326 2.1:+6975283 MS.gene45481:CDS
AGTTCGGAGTTGCTATGATG+AGG 0.589902 2.1:+6976449 MS.gene45481:CDS
TGACGAATTAGCTCAAATCT+CGG 0.598140 2.1:-6974785 None:intergenic
TTGCAAAGCGAGTTGGAGCA+AGG 0.600057 2.1:+6975794 MS.gene45481:CDS
CCAAAGGTCAAGTTGCGTGA+TGG 0.601200 2.1:+6977732 MS.gene45481:CDS
TCCAGCTGTGGAGATAAAGA+TGG 0.604901 2.1:+6977635 MS.gene45481:CDS
GTTCGGAGTTGCTATGATGA+GGG 0.608208 2.1:+6976450 MS.gene45481:CDS
AGAACACCCCTGATGATCCT+CGG 0.608361 2.1:+6977661 MS.gene45481:CDS
AGATTTGAGCTAATTCGTCA+TGG 0.615076 2.1:+6974788 MS.gene45481:CDS
GCAGCTTATTAATCCAGCTG+TGG 0.624211 2.1:+6977623 MS.gene45481:intron
AATCCTCTTCCATAAGAGGA+AGG 0.634078 2.1:-6977755 None:intergenic
TTTCCATCAATCTGTCAACA+AGG 0.639034 2.1:-6974590 None:intergenic
ATTGCTTGGATGGGAACCAA+AGG 0.642197 2.1:+6977716 MS.gene45481:CDS
TTTCTGCTATGTCTCTGACA+TGG 0.642724 2.1:+6977047 MS.gene45481:CDS
TGAACTTGCTGAGAATGTGA+AGG 0.652182 2.1:+6977333 MS.gene45481:CDS
AAGAATTTGGAAAATCGCAA+CGG 0.666135 2.1:-6973991 None:intergenic
CTATGATGAGGGCAAGCGTG+TGG 0.675259 2.1:+6976461 MS.gene45481:CDS
CCATCATCGATATTCATGCG+TGG 0.676212 2.1:-6976668 None:intergenic
CCACAACCAGAAACTTATTG+GGG 0.681738 2.1:+6975959 MS.gene45481:CDS
ACTTGCTGAGAATGTGAAGG+AGG 0.688062 2.1:+6977336 MS.gene45481:CDS
TCTTTGCCGAGGATCATCAG+GGG 0.694879 2.1:-6977667 None:intergenic
CTCATGGAAGGAGAAAACAC+TGG 0.733060 2.1:+6977176 MS.gene45481:CDS
AGATGTGACAGAGACACTGT+TGG 0.774861 2.1:+6975277 MS.gene45481:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGTTTATTAAAAACAAT+GGG - chr2.1:6975223-6975242 None:intergenic 10.0%
!! TTATACTTATAAGAAAAAAT+TGG - chr2.1:6975004-6975023 None:intergenic 10.0%
!! TTTATCATTATTATTATATC+CGG + chr2.1:6975641-6975660 MS.gene45481:intron 10.0%
!! AAAAGATGAAAAAAATGAAT+TGG - chr2.1:6976589-6976608 None:intergenic 15.0%
!! AAAATTCGTACATAAATTTA+AGG - chr2.1:6975624-6975643 None:intergenic 15.0%
!! AAATTCGTACATAAATTTAA+GGG - chr2.1:6975623-6975642 None:intergenic 15.0%
!! CTATAGTTTATTAAAAACAA+TGG - chr2.1:6975224-6975243 None:intergenic 15.0%
!!! AATTATTTGAAGTTAGTTAA+TGG + chr2.1:6977585-6977604 MS.gene45481:intron 15.0%
!!! CTTATAAGTATAAAGTATTT+GGG + chr2.1:6975011-6975030 MS.gene45481:intron 15.0%
!!! TATTAGTTATTTCTTATTCA+TGG + chr2.1:6974478-6974497 MS.gene45481:intron 15.0%
!!! TCTTATAAGTATAAAGTATT+TGG + chr2.1:6975010-6975029 MS.gene45481:intron 15.0%
!!! TTATAAGTATAAAGTATTTG+GGG + chr2.1:6975012-6975031 MS.gene45481:intron 15.0%
!!! TTCATTTTTCAAATTTTTAC+CGG + chr2.1:6975501-6975520 MS.gene45481:intron 15.0%
!! AAAATATAAGACCTATACAT+TGG - chr2.1:6977487-6977506 None:intergenic 20.0%
!! AAACAATCAAAATGACAAAA+CGG - chr2.1:6974052-6974071 None:intergenic 20.0%
!! AATTCGTACATAAATTTAAG+GGG - chr2.1:6975622-6975641 None:intergenic 20.0%
!! ACAATAAAGACTAATGTAAT+TGG + chr2.1:6975751-6975770 MS.gene45481:CDS 20.0%
!! ATTATTCGTATTATTCTTTC+AGG + chr2.1:6977295-6977314 MS.gene45481:intron 20.0%
!! TAAATTACACTAAATCTTTG+AGG - chr2.1:6976411-6976430 None:intergenic 20.0%
!! TCAAATTATCTAACATTCAA+AGG + chr2.1:6975715-6975734 MS.gene45481:intron 20.0%
!! TCAGATCAAAACATTATTTA+AGG - chr2.1:6976736-6976755 None:intergenic 20.0%
!! TCTCAAATATATGCAAAAAT+TGG + chr2.1:6974932-6974951 MS.gene45481:intron 20.0%
!! TGAATGTTAGATAATTTGAA+AGG - chr2.1:6975714-6975733 None:intergenic 20.0%
!! TTATATGCAATAATAGAATC+AGG - chr2.1:6974852-6974871 None:intergenic 20.0%
!!! ATTTAAGAATTTTTCACAAC+AGG + chr2.1:6976426-6976445 MS.gene45481:intron 20.0%
!!! CTAATTTAGTGGTTTATTTT+TGG + chr2.1:6976056-6976075 MS.gene45481:intron 20.0%
!!! TTTAATATGTATTAGGTTGA+TGG + chr2.1:6977143-6977162 MS.gene45481:intron 20.0%
! AAAAACAGAAATGAATGTTG+AGG - chr2.1:6975248-6975267 None:intergenic 25.0%
! AAACATGATCATTTGTTTGA+AGG - chr2.1:6976376-6976395 None:intergenic 25.0%
! AACATGATCATTTGTTTGAA+GGG - chr2.1:6976375-6976394 None:intergenic 25.0%
! AACTAAAGATCCATTCTTAA+AGG - chr2.1:6974244-6974263 None:intergenic 25.0%
! ACATTCCAAAAGAACTAAAA+TGG - chr2.1:6977373-6977392 None:intergenic 25.0%
! ATGCTATCATTTAGTAATTC+AGG + chr2.1:6974303-6974322 MS.gene45481:intron 25.0%
! ATTCGTACATAAATTTAAGG+GGG - chr2.1:6975621-6975640 None:intergenic 25.0%
! CAATAAAAACGACACAAATT+TGG - chr2.1:6974091-6974110 None:intergenic 25.0%
! CTTTGATGTTTGATTATCAT+AGG + chr2.1:6976490-6976509 MS.gene45481:CDS 25.0%
! GAAAATATATACTGTAAGCT+CGG + chr2.1:6976818-6976837 MS.gene45481:intron 25.0%
! GTAAAGACAACCTTAAAAAA+TGG + chr2.1:6974753-6974772 MS.gene45481:CDS 25.0%
! TATAAATATCCTACCTTTAC+AGG - chr2.1:6975365-6975384 None:intergenic 25.0%
! TGCTATCATTTAGTAATTCA+GGG + chr2.1:6974304-6974323 MS.gene45481:intron 25.0%
! TGTACAAGTACAATATCAAA+GGG - chr2.1:6975156-6975175 None:intergenic 25.0%
! TTGTACAAGTACAATATCAA+AGG - chr2.1:6975157-6975176 None:intergenic 25.0%
!! AACATCGAAAACGTTTTTAA+TGG + chr2.1:6976130-6976149 MS.gene45481:intron 25.0%
!! ATGTTAAGATTTGTGTCATT+TGG + chr2.1:6974889-6974908 MS.gene45481:intron 25.0%
!! GATACTTTTGTAAATGTTGT+AGG - chr2.1:6975575-6975594 None:intergenic 25.0%
!!! ACAAACCATTTTAGTTCTTT+TGG + chr2.1:6977365-6977384 MS.gene45481:intron 25.0%
!!! GTGGTTTATTTTTGGTTAAT+TGG + chr2.1:6976064-6976083 MS.gene45481:intron 25.0%
!!! TATTCATGGATTTTTAGTCA+TGG + chr2.1:6974492-6974511 MS.gene45481:intron 25.0%
!!! TCAAAGAAAGTTGATGTATT+TGG + chr2.1:6974955-6974974 MS.gene45481:intron 25.0%
!!! TGTTAAATATAGCTTGTTAG+TGG + chr2.1:6975035-6975054 MS.gene45481:intron 25.0%
!!! TTTTTGGTTAATTGGTTAAG+TGG + chr2.1:6976072-6976091 MS.gene45481:intron 25.0%
AAATACAATCCTGTAAAGGT+AGG + chr2.1:6975353-6975372 MS.gene45481:intron 30.0%
AACCACTAAATTAGACTATC+CGG - chr2.1:6976050-6976069 None:intergenic 30.0%
AAGAATTTGGAAAATCGCAA+CGG - chr2.1:6973994-6974013 None:intergenic 30.0%
AAGCTTAAACCTCTGAATAA+TGG + chr2.1:6977442-6977461 MS.gene45481:intron 30.0%
ACATGATCATTTGTTTGAAG+GGG - chr2.1:6976374-6976393 None:intergenic 30.0%
ACTAATACAATGAATGATCC+CGG - chr2.1:6974465-6974484 None:intergenic 30.0%
ACTCTTGAATACCAATGTAT+AGG + chr2.1:6977473-6977492 MS.gene45481:intron 30.0%
ACTTTATTGCTCAAGCAATT+CGG + chr2.1:6976705-6976724 MS.gene45481:CDS 30.0%
AGTTTGGAAATATATGGATG+TGG - chr2.1:6976237-6976256 None:intergenic 30.0%
ATAATTCACCAACACATTTC+GGG - chr2.1:6974348-6974367 None:intergenic 30.0%
ATCATTTAGTAATTCAGGGA+AGG + chr2.1:6974308-6974327 MS.gene45481:intron 30.0%
ATCCTGTGAAAATCAAGATT+TGG - chr2.1:6975893-6975912 None:intergenic 30.0%
ATGTACATAATCTGAGTTAC+CGG - chr2.1:6975663-6975682 None:intergenic 30.0%
CATAATTCACCAACACATTT+CGG - chr2.1:6974349-6974368 None:intergenic 30.0%
CTACAAATACAATCCTGTAA+AGG + chr2.1:6975349-6975368 MS.gene45481:CDS 30.0%
GAATTATGTACTTTAGTGAG+AGG + chr2.1:6974361-6974380 MS.gene45481:intron 30.0%
GACAACCTTAAAAAATGGAT+TGG + chr2.1:6974758-6974777 MS.gene45481:CDS 30.0%
GGATTGTATTTGTAGAAGAT+TGG - chr2.1:6975344-6975363 None:intergenic 30.0%
TAACATTCTTTGCTACAGTT+TGG - chr2.1:6976253-6976272 None:intergenic 30.0%
TCAAATGGAGATCAACATAA+TGG + chr2.1:6973928-6973947 MS.gene45481:CDS 30.0%
TCATTTAGTAATTCAGGGAA+GGG + chr2.1:6974309-6974328 MS.gene45481:intron 30.0%
TGAAGTTAGTTAATGGTTTG+TGG + chr2.1:6977592-6977611 MS.gene45481:intron 30.0%
TGATTGATCTATCTGTGTAA+TGG + chr2.1:6975687-6975706 MS.gene45481:intron 30.0%
TGCAATGATTACAAACCAAT+AGG - chr2.1:6974284-6974303 None:intergenic 30.0%
TGCTACAGTTTGGAAATATA+TGG - chr2.1:6976243-6976262 None:intergenic 30.0%
TTAAGCTTAAATATCGCATC+AGG - chr2.1:6977430-6977449 None:intergenic 30.0%
TTATGTCTTATGCATGTGAA+TGG - chr2.1:6974389-6974408 None:intergenic 30.0%
TTCGTACATAAATTTAAGGG+GGG - chr2.1:6975620-6975639 None:intergenic 30.0%
TTTGTACGTAGCTGAAAAAA+TGG - chr2.1:6976161-6976180 None:intergenic 30.0%
! AATCCAAACTTGTGTTTCTA+TGG + chr2.1:6976015-6976034 MS.gene45481:intron 30.0%
! AATTTTTCACAACAGGAGTT+CGG + chr2.1:6976433-6976452 MS.gene45481:intron 30.0%
! ACAATGGGAAACACAAATTT+TGG - chr2.1:6975208-6975227 None:intergenic 30.0%
! ACATCTACTTCAGAAGTATA+TGG + chr2.1:6975920-6975939 MS.gene45481:CDS 30.0%
! TACCAAATCTTGATTTTCAC+AGG + chr2.1:6975888-6975907 MS.gene45481:intron 30.0%
! TTGCATTTTCCATTATTCAG+AGG - chr2.1:6977454-6977473 None:intergenic 30.0%
!! AATATGAGAATTTTGGTGAC+CGG + chr2.1:6974543-6974562 MS.gene45481:CDS 30.0%
!! GTCAAAGAAGTTGATGTATT+TGG - chr2.1:6974982-6975001 None:intergenic 30.0%
!! TACTAGCTTTGACAAAGTTT+CGG + chr2.1:6974670-6974689 MS.gene45481:intron 30.0%
!!! CTTTTGCACTATTTTGAAAC+TGG + chr2.1:6976945-6976964 MS.gene45481:intron 30.0%
!!! GATGACCAATCCATTTTTTA+AGG - chr2.1:6974766-6974785 None:intergenic 30.0%
!!! TGTGTCGTTTTTATTGTGTT+TGG + chr2.1:6974095-6974114 MS.gene45481:intron 30.0%
AACCGGATAGTCTAATTTAG+TGG + chr2.1:6976045-6976064 MS.gene45481:intron 35.0%
ACAAAAGCAACAGAATTGCT+TGG + chr2.1:6977702-6977721 MS.gene45481:CDS 35.0%
ACATTTCCCCAATAAGTTTC+TGG - chr2.1:6975968-6975987 None:intergenic 35.0%
ACTGGTATGTAAAGAAACCT+GGG - chr2.1:6977220-6977239 None:intergenic 35.0%
AGAAACACAAGTTTGGATTG+AGG - chr2.1:6976014-6976033 None:intergenic 35.0%
AGATTTGAGCTAATTCGTCA+TGG + chr2.1:6974788-6974807 MS.gene45481:CDS 35.0%
ATCCACAACCAGAAACTTAT+TGG + chr2.1:6975957-6975976 MS.gene45481:CDS 35.0%
ATGCAATAATAGAATCAGGC+TGG - chr2.1:6974848-6974867 None:intergenic 35.0%
ATGCCATAGAAACACAAGTT+TGG - chr2.1:6976021-6976040 None:intergenic 35.0%
CCAAAATTCTCATATTGGAC+TGG - chr2.1:6974539-6974558 None:intergenic 35.0%
CTAAATTAGACTATCCGGTT+TGG - chr2.1:6976045-6976064 None:intergenic 35.0%
GAGGATAAGTATGTACCAAT+AGG - chr2.1:6975995-6976014 None:intergenic 35.0%
GATGGAAAATGAGAAAAACG+AGG + chr2.1:6974605-6974624 MS.gene45481:CDS 35.0%
GCAATTCACCTGAAAGAATT+TGG - chr2.1:6974007-6974026 None:intergenic 35.0%
GGTCACCAAAATTCTCATAT+TGG - chr2.1:6974544-6974563 None:intergenic 35.0%
GTAGCTGATAATTACTTCAC+TGG + chr2.1:6974728-6974747 MS.gene45481:CDS 35.0%
TAATTCACCAACACATTTCG+GGG - chr2.1:6974347-6974366 None:intergenic 35.0%
TCCACAACCAGAAACTTATT+GGG + chr2.1:6975958-6975977 MS.gene45481:CDS 35.0%
TCCATATGTGTTGAAGATTC+TGG - chr2.1:6976648-6976667 None:intergenic 35.0%
TGACGAATTAGCTCAAATCT+CGG - chr2.1:6974788-6974807 None:intergenic 35.0%
TTGGAAATATATGGATGTGG+TGG - chr2.1:6976234-6976253 None:intergenic 35.0%
TTTCCATCAATCTGTCAACA+AGG - chr2.1:6974593-6974612 None:intergenic 35.0%
TTTGATTATCATAGGCAGCA+TGG + chr2.1:6976498-6976517 MS.gene45481:CDS 35.0%
! AAGCCTTTTAGACAGTTTAC+AGG - chr2.1:6975403-6975422 None:intergenic 35.0%
! AGCCTTTTAGACAGTTTACA+GGG - chr2.1:6975402-6975421 None:intergenic 35.0%
! CCAGTCCAATATGAGAATTT+TGG + chr2.1:6974536-6974555 MS.gene45481:intron 35.0%
! CTTGTTTGGTGAAGAAAACA+TGG - chr2.1:6976540-6976559 None:intergenic 35.0%
! GCGATTTTCCAAATTCTTTC+AGG + chr2.1:6973996-6974015 MS.gene45481:CDS 35.0%
! TAACACTATGTTTTCTGCTC+AGG + chr2.1:6974700-6974719 MS.gene45481:intron 35.0%
! TTGCATATATTTGAGACCAG+AGG - chr2.1:6974928-6974947 None:intergenic 35.0%
!! AATAAGTTTCTGGTTGTGGA+TGG - chr2.1:6975958-6975977 None:intergenic 35.0%
!! GTGACTAGTCTACTAAATCA+AGG - chr2.1:6976920-6976939 None:intergenic 35.0%
!!! TCTGTTGCTTTTGTTATGTC+TGG - chr2.1:6977696-6977715 None:intergenic 35.0%
!!! TTTTTTCCTGATCTGCCTAT+TGG + chr2.1:6974266-6974285 MS.gene45481:intron 35.0%
AACACTGGTCCAATCAACAT+TGG + chr2.1:6977191-6977210 MS.gene45481:CDS 40.0%
AAGCAACAGAATTGCTTGGA+TGG + chr2.1:6977706-6977725 MS.gene45481:CDS 40.0%
AAGTGACTCCTCATTGATAG+AGG + chr2.1:6976557-6976576 MS.gene45481:intron 40.0%
AATCCTCTTCCATAAGAGGA+AGG - chr2.1:6977758-6977777 None:intergenic 40.0%
ACACTGCACATAAGTATCAC+TGG - chr2.1:6977238-6977257 None:intergenic 40.0%
ACACTGGTCCAATCAACATT+GGG + chr2.1:6977192-6977211 MS.gene45481:CDS 40.0%
ACTCACCATTGTAAATCAGC+TGG + chr2.1:6975130-6975149 MS.gene45481:intron 40.0%
AGCAACAGAATTGCTTGGAT+GGG + chr2.1:6977707-6977726 MS.gene45481:CDS 40.0%
ATAAAGTAACCCAAAGCGAG+TGG - chr2.1:6976342-6976361 None:intergenic 40.0%
ATCAAACTGCTAGTGTCAGT+TGG + chr2.1:6975862-6975881 MS.gene45481:intron 40.0%
ATTGGAACACTGAACATGCT+TGG + chr2.1:6975769-6975788 MS.gene45481:CDS 40.0%
CACGCATGAATATCGATGAT+GGG + chr2.1:6976669-6976688 MS.gene45481:CDS 40.0%
CACTGGTATGTAAAGAAACC+TGG - chr2.1:6977221-6977240 None:intergenic 40.0%
CCACAACCAGAAACTTATTG+GGG + chr2.1:6975959-6975978 MS.gene45481:CDS 40.0%
GACCCTGTAAACTGTCTAAA+AGG + chr2.1:6975397-6975416 MS.gene45481:intron 40.0%
GATTTAACCCCGAAATGTGT+TGG + chr2.1:6974337-6974356 MS.gene45481:intron 40.0%
GCCAGAATCTTCAACACATA+TGG + chr2.1:6976644-6976663 MS.gene45481:CDS 40.0%
GGCAATATCCTCTATCAATG+AGG - chr2.1:6976568-6976587 None:intergenic 40.0%
GTTTCTATGGCATTCCAAAC+CGG + chr2.1:6976028-6976047 MS.gene45481:intron 40.0%
TACAAACCAATAGGCAGATC+AGG - chr2.1:6974275-6974294 None:intergenic 40.0%
TATCATAGGCAGCATGGATT+AGG + chr2.1:6976504-6976523 MS.gene45481:CDS 40.0%
TCAATGAGGAGTCACTTGTT+TGG - chr2.1:6976554-6976573 None:intergenic 40.0%
TCACCTTGTTGACAGATTGA+TGG + chr2.1:6974587-6974606 MS.gene45481:CDS 40.0%
TGAGAAAAACGAGGTTTGCA+TGG + chr2.1:6974614-6974633 MS.gene45481:intron 40.0%
TGGGGAAATGTCAATCCTAT+TGG + chr2.1:6975977-6975996 MS.gene45481:CDS 40.0%
TGTAGAAGATTGGAGAAGCA+GGG - chr2.1:6975334-6975353 None:intergenic 40.0%
TTGGAACACTGAACATGCTT+GGG + chr2.1:6975770-6975789 MS.gene45481:CDS 40.0%
TTGTAGAAGATTGGAGAAGC+AGG - chr2.1:6975335-6975354 None:intergenic 40.0%
TTTCTGCTATGTCTCTGACA+TGG + chr2.1:6977047-6977066 MS.gene45481:CDS 40.0%
! ATGGCGTCGAATTCATCAAA+TGG + chr2.1:6973913-6973932 MS.gene45481:CDS 40.0%
! CTCTTGAATCTTGATGACTG+AGG + chr2.1:6976310-6976329 MS.gene45481:intron 40.0%
! TGATCATGTTTTGCAACCCA+TGG + chr2.1:6976385-6976404 MS.gene45481:intron 40.0%
!! ACACTAAATCTTTGAGGCCA+TGG - chr2.1:6976405-6976424 None:intergenic 40.0%
!! CACTAAATCTTTGAGGCCAT+GGG - chr2.1:6976404-6976423 None:intergenic 40.0%
!! TGAACTTGCTGAGAATGTGA+AGG + chr2.1:6977333-6977352 MS.gene45481:CDS 40.0%
AAACTGCGAGTTTGTGTTCC+TGG - chr2.1:6977030-6977049 None:intergenic 45.0%
ACCAATAAAACCAGCTCCTC+CGG - chr2.1:6974565-6974584 None:intergenic 45.0%
ACCATCTTTATCTCCACAGC+TGG - chr2.1:6977639-6977658 None:intergenic 45.0%
AGATGTGACAGAGACACTGT+TGG + chr2.1:6975277-6975296 MS.gene45481:intron 45.0%
AGTTCGGAGTTGCTATGATG+AGG + chr2.1:6976449-6976468 MS.gene45481:CDS 45.0%
ATTGCTTGGATGGGAACCAA+AGG + chr2.1:6977716-6977735 MS.gene45481:CDS 45.0%
CAGTGACACATTTCCATGTC+GGG + chr2.1:6975437-6975456 MS.gene45481:intron 45.0%
CCACGCATGAATATCGATGA+TGG + chr2.1:6976668-6976687 MS.gene45481:CDS 45.0%
CCATCATCGATATTCATGCG+TGG - chr2.1:6976671-6976690 None:intergenic 45.0%
CCTGGAAGTTGGACTGTTAA+GGG - chr2.1:6977012-6977031 None:intergenic 45.0%
CGGAAATCCTCTTCCATAAG+AGG - chr2.1:6977762-6977781 None:intergenic 45.0%
CTCATGGAAGGAGAAAACAC+TGG + chr2.1:6977176-6977195 MS.gene45481:CDS 45.0%
CTGGTTGTGGATGGATAAGA+GGG - chr2.1:6975949-6975968 None:intergenic 45.0%
CTTGTTCTTGTGTGTTGCAG+TGG + chr2.1:6976982-6977001 MS.gene45481:intron 45.0%
GAGTTTGTGTTCCTGGAAGT+TGG - chr2.1:6977023-6977042 None:intergenic 45.0%
GCAGCTTATTAATCCAGCTG+TGG + chr2.1:6977623-6977642 MS.gene45481:intron 45.0%
GCAGTGACACATTTCCATGT+CGG + chr2.1:6975436-6975455 MS.gene45481:intron 45.0%
GTGTCTCTGTCACATCTACT+CGG - chr2.1:6975274-6975293 None:intergenic 45.0%
GTTCGGAGTTGCTATGATGA+GGG + chr2.1:6976450-6976469 MS.gene45481:CDS 45.0%
TAAGGGGGGAGACAAAGAAA+GGG - chr2.1:6975606-6975625 None:intergenic 45.0%
TCCAGCTGTGGAGATAAAGA+TGG + chr2.1:6977635-6977654 MS.gene45481:CDS 45.0%
TCCATTCTTAAAGGCGAGAG+AGG - chr2.1:6974235-6974254 None:intergenic 45.0%
TCCTGGAAGTTGGACTGTTA+AGG - chr2.1:6977013-6977032 None:intergenic 45.0%
TCTGGTTGTGGATGGATAAG+AGG - chr2.1:6975950-6975969 None:intergenic 45.0%
TGAAGCATGCAACAGAAGCT+TGG + chr2.1:6975071-6975090 MS.gene45481:intron 45.0%
TGCACATCGATGCTGATCTA+TGG + chr2.1:6977110-6977129 MS.gene45481:intron 45.0%
TGGAAGAGGATTTCCGTCTA+AGG + chr2.1:6977766-6977785 MS.gene45481:CDS 45.0%
TGTCTCTGTCACATCTACTC+GGG - chr2.1:6975273-6975292 None:intergenic 45.0%
TTAAGGGGGGAGACAAAGAA+AGG - chr2.1:6975607-6975626 None:intergenic 45.0%
TTCTTTGCCGAGGATCATCA+GGG - chr2.1:6977671-6977690 None:intergenic 45.0%
TTGGAAAATCGCAACGGAGA+TGG - chr2.1:6973988-6974007 None:intergenic 45.0%
TTTCTTTGCCGAGGATCATC+AGG - chr2.1:6977672-6977691 None:intergenic 45.0%
! AAGGGCCAGCTGATTTACAA+TGG - chr2.1:6975138-6975157 None:intergenic 45.0%
! ACTTGCTGAGAATGTGAAGG+AGG + chr2.1:6977336-6977355 MS.gene45481:CDS 45.0%
! AGGATTTCCGTCTAAGGCTT+GGG + chr2.1:6977772-6977791 MS.gene45481:CDS 45.0%
! CACTGTTGGTTGAGGTTGAT+CGG + chr2.1:6975291-6975310 MS.gene45481:CDS 45.0%
! CAGTGTTTTCTCCTTCCATG+AGG - chr2.1:6977178-6977197 None:intergenic 45.0%
! GAAATGTGTCACTGCTACAG+AGG - chr2.1:6975431-6975450 None:intergenic 45.0%
! TCCTCTCTCGCCTTTAAGAA+TGG + chr2.1:6974231-6974250 MS.gene45481:intron 45.0%
!! ATGAGAATTTTGGTGACCGG+AGG + chr2.1:6974546-6974565 MS.gene45481:CDS 45.0%
!! CCCCAATAAGTTTCTGGTTG+TGG - chr2.1:6975962-6975981 None:intergenic 45.0%
!! TGATTACCAGAGCACTGTTG+TGG + chr2.1:6974439-6974458 MS.gene45481:intron 45.0%
!!! ATGTCTGGTTTTCTTTGCCG+AGG - chr2.1:6977681-6977700 None:intergenic 45.0%
!!! TTATATTTTTAATATGTATT+AGG + chr2.1:6977136-6977155 MS.gene45481:intron 5.0%
AAAATCGCAACGGAGATGGC+AGG - chr2.1:6973984-6974003 None:intergenic 50.0%
AAATCGCAACGGAGATGGCA+GGG - chr2.1:6973983-6974002 None:intergenic 50.0%
AGAACACCCCTGATGATCCT+CGG + chr2.1:6977661-6977680 MS.gene45481:CDS 50.0%
AGCATGCAACAGAAGCTTGG+TGG + chr2.1:6975074-6975093 MS.gene45481:intron 50.0%
CCAATCAACATTGGGAACCC+AGG + chr2.1:6977200-6977219 MS.gene45481:CDS 50.0%
CCATCACGCAACTTGACCTT+TGG - chr2.1:6977735-6977754 None:intergenic 50.0%
CCCTTAACAGTCCAACTTCC+AGG + chr2.1:6977009-6977028 MS.gene45481:CDS 50.0%
CCTGGGTTCCCAATGTTGAT+TGG - chr2.1:6977203-6977222 None:intergenic 50.0%
CGACACAGACACATTGACAC+CGG - chr2.1:6975523-6975542 None:intergenic 50.0%
CTCCTTCCATGAGGCGAATT+AGG - chr2.1:6977169-6977188 None:intergenic 50.0%
GTCTCTGTCACATCTACTCG+GGG - chr2.1:6975272-6975291 None:intergenic 50.0%
TCTTTGCCGAGGATCATCAG+GGG - chr2.1:6977670-6977689 None:intergenic 50.0%
TGATGGCCTAATTCGCCTCA+TGG + chr2.1:6977160-6977179 MS.gene45481:CDS 50.0%
TGGCCTTCCTCTTATGGAAG+AGG + chr2.1:6977752-6977771 MS.gene45481:CDS 50.0%
TGGTTGCACGTTACTTCCTC+TGG + chr2.1:6974909-6974928 MS.gene45481:intron 50.0%
! AAAGCGAGTTGGAGCAAGGT+CGG + chr2.1:6975798-6975817 MS.gene45481:intron 50.0%
! ACGTGTGTTGTTGTCGTGTC+GGG - chr2.1:6975466-6975485 None:intergenic 50.0%
! AGGCTTTTGCCACTCGCTTT+GGG + chr2.1:6976330-6976349 MS.gene45481:intron 50.0%
! CACGTGTGTTGTTGTCGTGT+CGG - chr2.1:6975467-6975486 None:intergenic 50.0%
! CCAAAGGTCAAGTTGCGTGA+TGG + chr2.1:6977732-6977751 MS.gene45481:CDS 50.0%
! CGGTGTCAATGTGTCTGTGT+CGG + chr2.1:6975521-6975540 MS.gene45481:intron 50.0%
! GACAGAGACACTGTTGGTTG+AGG + chr2.1:6975283-6975302 MS.gene45481:CDS 50.0%
! GAGGATTTCCGTCTAAGGCT+TGG + chr2.1:6977771-6977790 MS.gene45481:CDS 50.0%
! GGATTTCCGTCTAAGGCTTG+GGG + chr2.1:6977773-6977792 MS.gene45481:CDS 50.0%
! TTGCAAAGCGAGTTGGAGCA+AGG + chr2.1:6975794-6975813 MS.gene45481:CDS 50.0%
!!! ACCGGAGGAGCTGGTTTTAT+TGG + chr2.1:6974561-6974580 MS.gene45481:CDS 50.0%
AATCGCAACGGAGATGGCAG+GGG - chr2.1:6973982-6974001 None:intergenic 55.0%
CTATGATGAGGGCAAGCGTG+TGG + chr2.1:6976461-6976480 MS.gene45481:CDS 55.0%
CTTGGGCTTGCAAAGCGAGT+TGG + chr2.1:6975787-6975806 MS.gene45481:CDS 55.0%
GAAGATTGGAGAAGCAGGGC+AGG - chr2.1:6975330-6975349 None:intergenic 55.0%
GCGTGATGGCCTTCCTCTTA+TGG + chr2.1:6977746-6977765 MS.gene45481:CDS 55.0%
GGCCTAATTCGCCTCATGGA+AGG + chr2.1:6977164-6977183 MS.gene45481:CDS 55.0%
TGGGAACCCCAAGCCTTAGA+CGG - chr2.1:6977782-6977801 None:intergenic 55.0%
! CGTGTGTTGTTGTCGTGTCG+GGG - chr2.1:6975465-6975484 None:intergenic 55.0%
! GAGGCTTTTGCCACTCGCTT+TGG + chr2.1:6976329-6976348 MS.gene45481:intron 55.0%
!! ATTTTGGTGACCGGAGGAGC+TGG + chr2.1:6974552-6974571 MS.gene45481:CDS 55.0%
!! TACCAGAGCACTGTTGTGGC+CGG + chr2.1:6974443-6974462 MS.gene45481:intron 55.0%
AGGCGAGAGAGGAAGCTCAC+AGG - chr2.1:6974224-6974243 None:intergenic 60.0%
!! ACCAGAGCACTGTTGTGGCC+GGG + chr2.1:6974444-6974463 MS.gene45481:intron 60.0%
GAGAAGCAGGGCAGGCGAGA+TGG - chr2.1:6975322-6975341 None:intergenic 65.0%
TCCCGGCCACAACAGTGCTC+TGG - chr2.1:6974448-6974467 None:intergenic 65.0%
CGCAACGGAGATGGCAGGGG+AGG - chr2.1:6973979-6973998 None:intergenic 70.0%
! TCGTGTCGGGGCGCCCGACA+TGG - chr2.1:6975453-6975472 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 6973913 6977812 6973913 ID=MS.gene45481
chr2.1 mRNA 6973913 6977812 6973913 ID=MS.gene45481.t1;Parent=MS.gene45481
chr2.1 exon 6973913 6974017 6973913 ID=MS.gene45481.t1.exon1;Parent=MS.gene45481.t1
chr2.1 CDS 6973913 6974017 6973913 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6974540 6974626 6974540 ID=MS.gene45481.t1.exon2;Parent=MS.gene45481.t1
chr2.1 CDS 6974540 6974626 6974540 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6974722 6974809 6974722 ID=MS.gene45481.t1.exon3;Parent=MS.gene45481.t1
chr2.1 CDS 6974722 6974809 6974722 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6975279 6975370 6975279 ID=MS.gene45481.t1.exon4;Parent=MS.gene45481.t1
chr2.1 CDS 6975279 6975370 6975279 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6975751 6975815 6975751 ID=MS.gene45481.t1.exon5;Parent=MS.gene45481.t1
chr2.1 CDS 6975751 6975815 6975751 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6975910 6975998 6975910 ID=MS.gene45481.t1.exon6;Parent=MS.gene45481.t1
chr2.1 CDS 6975910 6975998 6975910 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6976448 6976525 6976448 ID=MS.gene45481.t1.exon7;Parent=MS.gene45481.t1
chr2.1 CDS 6976448 6976525 6976448 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6976633 6976726 6976633 ID=MS.gene45481.t1.exon8;Parent=MS.gene45481.t1
chr2.1 CDS 6976633 6976726 6976633 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6977002 6977068 6977002 ID=MS.gene45481.t1.exon9;Parent=MS.gene45481.t1
chr2.1 CDS 6977002 6977068 6977002 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6977158 6977221 6977158 ID=MS.gene45481.t1.exon10;Parent=MS.gene45481.t1
chr2.1 CDS 6977158 6977221 6977158 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6977317 6977357 6977317 ID=MS.gene45481.t1.exon11;Parent=MS.gene45481.t1
chr2.1 CDS 6977317 6977357 6977317 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
chr2.1 exon 6977627 6977812 6977627 ID=MS.gene45481.t1.exon12;Parent=MS.gene45481.t1
chr2.1 CDS 6977627 6977812 6977627 ID=cds.MS.gene45481.t1;Parent=MS.gene45481.t1
Gene Sequence

>MS.gene45481

ATGGCGTCGAATTCATCAAATGGAGATCAACATAATGGAGATCAACAGACAACAACAAAGCAACCTCCCCTGCCATCTCCGTTGCGATTTTCCAAATTCTTTCAGGTGAATTGCTGCATGATTGCATTTATTCATGCCGTTTTGTCATTTTGATTGTTTCTTGAATCATGTTTTGCCAAATTTGTGTCGTTTTTATTGTGTTTGGTGCATTGTTTTATTTTGACACTGATAATGTTGAATTTGATAATGTTGAATTTGATTCTGACATGTAAAGCATAAATTGTGCATCAGATGATTACTTAGCTGTGCCTGTGAGCTTCCTCTCTCGCCTTTAAGAATGGATCTTTAGTTTTTTTTTTCCTGATCTGCCTATTGGTTTGTAATCATTGCATGCTATCATTTAGTAATTCAGGGAAGGGTATCAGATTTAACCCCGAAATGTGTTGGTGAATTATGTACTTTAGTGAGAGGATCCATTCACATGCATAAGACATAACGTCGTACTATCTCACAATCAAAAAGTTTGTGATTACCAGAGCACTGTTGTGGCCGGGATCATTCATTGTATTAGTTATTTCTTATTCATGGATTTTTAGTCATGGTTTTTTCATTTCATTCTTGAACCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTTTGCATGGCTTATTTCTTTCTGTGTATTTAGTATTCAAGTTTACTAGCTTTGACAAAGTTTCGGTACAACATAACACTATGTTTTCTGCTCAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCATGGTATAATTTCTTCAGTTTTTCTATCACAATCATCTCCAGCCTGATTCTATTATTGCATATAAGATGAAATTTGAAATTGATGTTAAGATTTGTGTCATTTGGTTGCACGTTACTTCCTCTGGTCTCAAATATATGCAAAAATTGGTCAAAGAAAGTTGATGTATTTGGACCAAATACATCAACTTCTTTGACCAATTTTTTCTTATAAGTATAAAGTATTTGGGGTGTTAAATATAGCTTGTTAGTGGTCTTAAAAAACTATGAAGCATGCAACAGAAGCTTGGTGGTTATAAAATAAGATATTAAACTGACTACAAATCACTCACCATTGTAAATCAGCTGGCCCTTTGATATTGTACTTGTACAACACTAATGATGATGCTTCTTCATGAGCACCAAAATTTGTGTTTCCCATTGTTTTTAATAAACTATAGACCTCAACATTCATTTCTGTTTTTTCCCCGAGTAGATGTGACAGAGACACTGTTGGTTGAGGTTGATCGGATCTACCATCTCGCCTGCCCTGCTTCTCCAATCTTCTACAAATACAATCCTGTAAAGGTAGGATATTTATAGTCTTTATACATGACCCTGTAAACTGTCTAAAAGGCTTTATTGCCTCTGTAGCAGTGACACATTTCCATGTCGGGCGCCCCGACACGACAACAACACACGTGATTACTTCAACTAATTCATTTTTCAAATTTTTACCGGTGTCAATGTGTCTGTGTCGGTGTTTCATAGCTTATTTATTGCTTGCTACCTACAACATTTACAAAAGTATCTTACAGAACCCTTTCTTTGTCTCCCCCCTTAAATTTATGTACGAATTTTATCATTATTATTATATCCGGTAACTCAGATTATGTACATTTGTTGATTGATCTATCTGTGTAATGGACCTTTCAAATTATCTAACATTCAAAGGAATAACTTTACAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGTCGGCAATTGTTTCTTTTCTTCTCTTTTTAAATATTTTGTCGATAATCAAACTGCTAGTGTCAGTTGGTTTTACCAAATCTTGATTTTCACAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTATTGGGGAAATGTCAATCCTATTGGTACATACTTATCCTCAATCCAAACTTGTGTTTCTATGGCATTCCAAACCGGATAGTCTAATTTAGTGGTTTATTTTTGGTTAATTGGTTAAGTGGATTTACATTATCATTTAGTTTTTATAATTCAAAGCAACATCGAAAACGTTTTTAATGGACAAACCATTTTTTCAGCTACGTACAAAGCTAAACATTTGAATATATGTTCTCTTTGAATTATATTTTTAAAGTAAGACCACCACATCCATATATTTCCAAACTGTAGCAAAGAATGTTAATTTTTTAAGAGATGTCATTTCTTTTGAAGTTTTAGTCTCTTGAATCTTGATGACTGAGGCTTTTGCCACTCGCTTTGGGTTACTTTATATTAACAGTCCCCTTCAAACAAATGATCATGTTTTGCAACCCATGGCCTCAAAGATTTAGTGTAATTTAAGAATTTTTCACAACAGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGGTAATGTTATGCCATGTTTTCTTCACCAAACAAGTGACTCCTCATTGATAGAGGATATTGCCAATTCATTTTTTTCATCTTTTGTTAACTGAATACTATTTTCACAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCAATTCGGTAAGTCCTTAAATAATGTTTTGATCTGATTGACTAAAATAATTTCTATGAGAAAACTACGTAAGAGATGTACTGTTAACTCTTATGAAAAGAAAATATATACTGTAAGCTCGGTCTTTATAAACAACAGATAAATTTACTCGAATAGCTAGTTGTTTATCTGTTAAATTACTAGTCATTGATCTGAATACCTTGATTTAGTAGACTAGTCACAATTTCTTTTGCACTATTTTGAAACTGGATTTTTGACTGTTACTTGTTCTTGTGTGTTGCAGTGGTGAGCCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTATATATGAAGCGTTGCTCATCGTGTTTTGCTTTTAGAGTTGCACATCGATGCTGATCTATGGTTGTTATATTTTTAATATGTATTAGGTTGATGGCCTAATTCGCCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTTTCTTTACATACCAGTGATACTTATGTGCAGTGTACGCTTTTTTATTCTTCTGTTGTGCTTGTTTGCATTGATTATTCGTATTATTCTTTCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGGTCAGTTACAAACCATTTTAGTTCTTTTGGAATGTCAAATACGTCTCTTTATCTTAGTATTGTTATATTCCTGATGCGATATTTAAGCTTAAACCTCTGAATAATGGAAAATGCAACTCTTGAATACCAATGTATAGGTCTTATATTTTGCGATGAATTGTATATTATATGCATTTTACTAACTACATGTAACGTAACTTTGTGATTTAATAATAGAGATTTATGTGAATTATTTGAAGTTAGTTAATGGTTTGTGGATGATTTTGCAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTAAGGCTTGGGGTTCCCAGAAAGAACTAA
Protein sequence

>MS.gene45481.t1

MASNSSNGDQHNGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN