Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002484.t1 | XP_013461067.1 | 100 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 4.20E-111 | 410.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002484.t1 | O82528 | 88.2 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 2.2e-100 | 366.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002484.t1 | I3T9M3 | 100.0 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 3.1e-111 | 410.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61498 | MS.gene002484 | PPI |
| MS.gene01456 | MS.gene002484 | PPI |
| MS.gene045843 | MS.gene002484 | PPI |
| MS.gene002484 | MS.gene045843 | PPI |
| MS.gene002484 | MS.gene01057 | PPI |
| MS.gene002484 | MS.gene022249 | PPI |
| MS.gene002484 | MS.gene067362 | PPI |
| MS.gene002484 | MS.gene62426 | PPI |
| MS.gene002484 | MS.gene047337 | PPI |
| MS.gene002484 | MS.gene61498 | PPI |
| MS.gene036800 | MS.gene002484 | PPI |
| MS.gene59047 | MS.gene002484 | PPI |
| MS.gene002484 | MS.gene01456 | PPI |
| MS.gene074400 | MS.gene002484 | PPI |
| MS.gene002484 | MS.gene70579 | PPI |
| MS.gene002484 | MS.gene038837 | PPI |
| MS.gene002484 | MS.gene25903 | PPI |
| MS.gene038837 | MS.gene002484 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002484.t1 | MTR_3g078653 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 8.57e-150 | 414 |
| MS.gene002484.t1 | MTR_2g014220 | 99.510 | 204 | 1 | 0 | 1 | 204 | 49 | 252 | 2.38e-149 | 415 |
| MS.gene002484.t1 | MTR_7g026915 | 94.915 | 59 | 3 | 0 | 1 | 59 | 1 | 59 | 3.81e-33 | 125 |
| MS.gene002484.t1 | MTR_7g026915 | 87.500 | 64 | 8 | 0 | 1 | 64 | 1 | 64 | 1.52e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002484.t1 | AT4G16720 | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 8.64e-122 | 343 |
| MS.gene002484.t1 | AT4G17390 | 87.745 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.80e-121 | 342 |
Find 73 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGAAGCTTGGTGGCCTT+AGG | 0.282780 | 2.1:-70772174 | MS.gene002484:CDS |
| GTTTCCAAGGGTATTGTATA+CGG | 0.297546 | 2.1:-70772271 | MS.gene002484:CDS |
| TTGGTAAGCCAGTTGATTCT+TGG | 0.325346 | 2.1:+70772058 | None:intergenic |
| TCCTGACAAAGCTCGCCGTT+TGG | 0.353079 | 2.1:-70772599 | MS.gene002484:CDS |
| ACAAGTATGTTTCTGAGTTA+TGG | 0.369598 | 2.1:-70772720 | MS.gene002484:CDS |
| TTAGGGTTCTCAATTCCTAC+TGG | 0.369741 | 2.1:-70772156 | MS.gene002484:CDS |
| CCTGACAAAGCTCGCCGTTT+GGG | 0.382164 | 2.1:-70772598 | MS.gene002484:CDS |
| GTCCATCTCGCAGGGCAAAC+TGG | 0.382984 | 2.1:-70771940 | MS.gene002484:CDS |
| TGCGAGATGGACGGGCTTTG+TGG | 0.391277 | 2.1:+70771951 | None:intergenic |
| GAGGAAGCTTGGTGGCCTTA+GGG | 0.392690 | 2.1:-70772173 | MS.gene002484:CDS |
| AATGACCTCAAAATACTTGA+AGG | 0.426532 | 2.1:+70772117 | None:intergenic |
| AGCTCGCCGTTTGGGTTACA+AGG | 0.427870 | 2.1:-70772590 | MS.gene002484:CDS |
| TCTGTTGCCGAGGAGCGTGC+TGG | 0.428375 | 2.1:-70772196 | MS.gene002484:CDS |
| CCCAAACGGCGAGCTTTGTC+AGG | 0.428600 | 2.1:+70772598 | None:intergenic |
| GTTTGCCCTGCGAGATGGAC+GGG | 0.443094 | 2.1:+70771943 | None:intergenic |
| TTTGTCAGGACGAGTGGGTC+TGG | 0.461552 | 2.1:+70772612 | None:intergenic |
| TATACAATACCCTTGGAAAC+CGG | 0.467374 | 2.1:+70772274 | None:intergenic |
| CTGTTGCCGAGGAGCGTGCT+GGG | 0.471029 | 2.1:-70772195 | MS.gene002484:CDS |
| GAGCGTGCTGGGAGGAAGCT+TGG | 0.477629 | 2.1:-70772184 | MS.gene002484:CDS |
| CCAATCCTGTCCACAAGCAT+AGG | 0.488032 | 2.1:-70772039 | MS.gene002484:CDS |
| TTCCAGTTTGCCCTGCGAGA+TGG | 0.489110 | 2.1:+70771938 | None:intergenic |
| TTACTCAACTTAAGTTTCAA+AGG | 0.490055 | 2.1:-70772228 | MS.gene002484:CDS |
| TACGTAGAGGTGGGAGAAAG+AGG | 0.490900 | 2.1:-70772297 | MS.gene002484:CDS |
| ACAAAGCCCGTCCATCTCGC+AGG | 0.495488 | 2.1:-70771949 | MS.gene002484:CDS |
| CTTCGTGGTCTCACTTCTGC+TGG | 0.495517 | 2.1:-70772013 | MS.gene002484:CDS |
| TTGAGTAACTCCCTGGTTAG+TGG | 0.499501 | 2.1:+70772243 | None:intergenic |
| TCATGCAGCGTGTGAGGTGT+TGG | 0.501162 | 2.1:-70772669 | MS.gene002484:CDS |
| CATGCAGCGTGTGAGGTGTT+GGG | 0.510206 | 2.1:-70772668 | MS.gene002484:CDS |
| AGTTTGCCCTGCGAGATGGA+CGG | 0.510514 | 2.1:+70771942 | None:intergenic |
| GAGAAAGAGGCCGGTTTCCA+AGG | 0.516642 | 2.1:-70772284 | MS.gene002484:CDS |
| TGAGTAACTCCCTGGTTAGT+GGG | 0.518159 | 2.1:+70772244 | None:intergenic |
| CCTATGCTTGTGGACAGGAT+TGG | 0.520921 | 2.1:+70772039 | None:intergenic |
| CACGAAGTTCCCTATGCTTG+TGG | 0.529755 | 2.1:+70772029 | None:intergenic |
| GAAATGATCCAAGAATCAAC+TGG | 0.530060 | 2.1:-70772066 | MS.gene002484:CDS |
| AACAGAGGTTTGAGTGGCAA+AGG | 0.530737 | 2.1:-70771983 | MS.gene002484:CDS |
| TTTCCAAGGGTATTGTATAC+GGG | 0.532253 | 2.1:-70772270 | MS.gene002484:CDS |
| TTTGGGTTACAAGGCCAAGC+AGG | 0.540516 | 2.1:-70772581 | MS.gene002484:intron |
| AGTTCCCTATGCTTGTGGAC+AGG | 0.542094 | 2.1:+70772034 | None:intergenic |
| CGTGCTGGGAGGAAGCTTGG+TGG | 0.543008 | 2.1:-70772181 | MS.gene002484:CDS |
| ATACGGGAAGCCCACTAACC+AGG | 0.546286 | 2.1:-70772254 | MS.gene002484:CDS |
| GCGAGCTTTGTCAGGACGAG+TGG | 0.547527 | 2.1:+70772606 | None:intergenic |
| TAGGGTTCTCAATTCCTACT+GGG | 0.548434 | 2.1:-70772155 | MS.gene002484:CDS |
| CTTCCTCCCAGCACGCTCCT+CGG | 0.550992 | 2.1:+70772189 | None:intergenic |
| CACCTCTACGTACCCTCACT+CGG | 0.553002 | 2.1:+70772308 | None:intergenic |
| AAGAATAGATGATACCTGCT+TGG | 0.559188 | 2.1:+70772567 | None:intergenic |
| CAATCCTGTCCACAAGCATA+GGG | 0.561253 | 2.1:-70772038 | MS.gene002484:CDS |
| ACTTAAGTTGAGTAACTCCC+TGG | 0.562594 | 2.1:+70772236 | None:intergenic |
| CTTCCCGTATACAATACCCT+TGG | 0.574843 | 2.1:+70772267 | None:intergenic |
| CAATTCCTACTGGGTCAATG+AGG | 0.583661 | 2.1:-70772146 | MS.gene002484:CDS |
| AGAAAGAGGCCGGTTTCCAA+GGG | 0.585417 | 2.1:-70772283 | MS.gene002484:CDS |
| CGAGTGAGGGTACGTAGAGG+TGG | 0.590318 | 2.1:-70772307 | MS.gene002484:CDS |
| ACAGAGGTTTGAGTGGCAAA+GGG | 0.593708 | 2.1:-70771982 | MS.gene002484:CDS |
| GCTTGGCCTTGTAACCCAAA+CGG | 0.594502 | 2.1:+70772584 | None:intergenic |
| TAGAGGTGGGAGAAAGAGGC+CGG | 0.597426 | 2.1:-70772293 | MS.gene002484:CDS |
| CAAAGCCCGTCCATCTCGCA+GGG | 0.599732 | 2.1:-70771948 | MS.gene002484:CDS |
| CACAAGCATAGGGAACTTCG+TGG | 0.602517 | 2.1:-70772028 | MS.gene002484:CDS |
| GAGTAAGAGATCTGTTGCCG+AGG | 0.608981 | 2.1:-70772206 | MS.gene002484:CDS |
| TACGGGAAGCCCACTAACCA+GGG | 0.619308 | 2.1:-70772253 | MS.gene002484:CDS |
| GTTATGTTGTGTACCGAGTG+AGG | 0.619671 | 2.1:-70772321 | MS.gene002484:CDS |
| AGAATCCTCATTGACCCAGT+AGG | 0.619890 | 2.1:+70772141 | None:intergenic |
| CGAGCTTTGTCAGGACGAGT+GGG | 0.623786 | 2.1:+70772607 | None:intergenic |
| GGGTCTGGTGAGACGAACAA+TGG | 0.629081 | 2.1:+70772627 | None:intergenic |
| TGAGATTCATGCAGCGTGTG+AGG | 0.638236 | 2.1:-70772675 | MS.gene002484:CDS |
| AAAGAAAACAGAGGTTTGAG+TGG | 0.638472 | 2.1:-70771989 | MS.gene002484:CDS |
| AGTATGTTTCTGAGTTATGG+CGG | 0.642445 | 2.1:-70772717 | MS.gene002484:CDS |
| AGTAGGAATTGAGAACCCTA+AGG | 0.644888 | 2.1:+70772158 | None:intergenic |
| TTATGTTGTGTACCGAGTGA+GGG | 0.645103 | 2.1:-70772320 | MS.gene002484:CDS |
| TTGCCGAGGAGCGTGCTGGG+AGG | 0.662735 | 2.1:-70772192 | MS.gene002484:CDS |
| GTTATGGCGGAAGAAGCAAT+CGG | 0.676275 | 2.1:-70772704 | MS.gene002484:CDS |
| TCTGCTGGTAAAGAAAACAG+AGG | 0.678817 | 2.1:-70771998 | MS.gene002484:CDS |
| GAGTGAGGGTACGTAGAGGT+GGG | 0.682033 | 2.1:-70772306 | MS.gene002484:CDS |
| AGTAAAATCAACGATAACGA+CGG | 0.699472 | 2.1:+70771894 | None:intergenic |
| TACCGAGTGAGGGTACGTAG+AGG | 0.717794 | 2.1:-70772310 | MS.gene002484:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAGCTTATTATTGATA+AGG | + | chr2.1:70772201-70772220 | None:intergenic | 20.0% |
| !! | CATCAATATAAGTTCTATTA+AGG | + | chr2.1:70772336-70772355 | None:intergenic | 20.0% |
| !!! | ATTTGAACTTCATTGATTTT+AGG | - | chr2.1:70772381-70772400 | MS.gene002484:intron | 20.0% |
| !!! | GTTATTTGTGAATTTTGAAT+AGG | - | chr2.1:70771977-70771996 | MS.gene002484:CDS | 20.0% |
| !!! | TTTGAACTTCATTGATTTTA+GGG | - | chr2.1:70772382-70772401 | MS.gene002484:intron | 20.0% |
| ! | AGAAAGAATTAAAGCATGTT+TGG | + | chr2.1:70772266-70772285 | None:intergenic | 25.0% |
| ! | TTACTCAACTTAAGTTTCAA+AGG | - | chr2.1:70772497-70772516 | MS.gene002484:intron | 25.0% |
| AATGACCTCAAAATACTTGA+AGG | + | chr2.1:70772611-70772630 | None:intergenic | 30.0% | |
| GAATTAAAGCATGTTTGGAT+TGG | + | chr2.1:70772261-70772280 | None:intergenic | 30.0% | |
| ! | ACAAGTATGTTTCTGAGTTA+TGG | - | chr2.1:70772005-70772024 | MS.gene002484:CDS | 30.0% |
| ! | TTCTACCTTCAAGTATTTTG+AGG | - | chr2.1:70772603-70772622 | MS.gene002484:CDS | 30.0% |
| !!! | CAAGTATTTTGAGGTCATTT+TGG | - | chr2.1:70772612-70772631 | MS.gene002484:CDS | 30.0% |
| AAAGAAAACAGAGGTTTGAG+TGG | - | chr2.1:70772736-70772755 | MS.gene002484:intron | 35.0% | |
| AAGAATAGATGATACCTGCT+TGG | + | chr2.1:70772161-70772180 | None:intergenic | 35.0% | |
| GAAATGATCCAAGAATCAAC+TGG | - | chr2.1:70772659-70772678 | MS.gene002484:CDS | 35.0% | |
| TATACAATACCCTTGGAAAC+CGG | + | chr2.1:70772454-70772473 | None:intergenic | 35.0% | |
| ! | AGTATGTTTCTGAGTTATGG+CGG | - | chr2.1:70772008-70772027 | MS.gene002484:CDS | 35.0% |
| !! | CTGTTTCTATTCATTCTCTC+AGG | - | chr2.1:70771929-70771948 | MS.gene002484:CDS | 35.0% |
| !! | GTTTCCAAGGGTATTGTATA+CGG | - | chr2.1:70772454-70772473 | MS.gene002484:intron | 35.0% |
| !! | TTTCCAAGGGTATTGTATAC+GGG | - | chr2.1:70772455-70772474 | MS.gene002484:intron | 35.0% |
| AGTAGGAATTGAGAACCCTA+AGG | + | chr2.1:70772570-70772589 | None:intergenic | 40.0% | |
| TAGGGTTCTCAATTCCTACT+GGG | - | chr2.1:70772570-70772589 | MS.gene002484:intron | 40.0% | |
| TCTGCTGGTAAAGAAAACAG+AGG | - | chr2.1:70772727-70772746 | MS.gene002484:CDS | 40.0% | |
| TTAGGGTTCTCAATTCCTAC+TGG | - | chr2.1:70772569-70772588 | MS.gene002484:intron | 40.0% | |
| TTATGTTGTGTACCGAGTGA+GGG | - | chr2.1:70772405-70772424 | MS.gene002484:intron | 40.0% | |
| ! | TTGGTAAGCCAGTTGATTCT+TGG | + | chr2.1:70772670-70772689 | None:intergenic | 40.0% |
| !! | ACTTAAGTTGAGTAACTCCC+TGG | + | chr2.1:70772492-70772511 | None:intergenic | 40.0% |
| AACAGAGGTTTGAGTGGCAA+AGG | - | chr2.1:70772742-70772761 | MS.gene002484:intron | 45.0% | |
| ACAGAGGTTTGAGTGGCAAA+GGG | - | chr2.1:70772743-70772762 | MS.gene002484:intron | 45.0% | |
| AGAATCCTCATTGACCCAGT+AGG | + | chr2.1:70772587-70772606 | None:intergenic | 45.0% | |
| CAATCCTGTCCACAAGCATA+GGG | - | chr2.1:70772687-70772706 | MS.gene002484:CDS | 45.0% | |
| CAATTCCTACTGGGTCAATG+AGG | - | chr2.1:70772579-70772598 | MS.gene002484:intron | 45.0% | |
| CTTCCCGTATACAATACCCT+TGG | + | chr2.1:70772461-70772480 | None:intergenic | 45.0% | |
| GAAACAGCAGCTGCAATAGA+TGG | + | chr2.1:70771916-70771935 | None:intergenic | 45.0% | |
| GTTATGTTGTGTACCGAGTG+AGG | - | chr2.1:70772404-70772423 | MS.gene002484:intron | 45.0% | |
| TGAGTAACTCCCTGGTTAGT+GGG | + | chr2.1:70772484-70772503 | None:intergenic | 45.0% | |
| TTGAGTAACTCCCTGGTTAG+TGG | + | chr2.1:70772485-70772504 | None:intergenic | 45.0% | |
| ! | GTTATGGCGGAAGAAGCAAT+CGG | - | chr2.1:70772021-70772040 | MS.gene002484:CDS | 45.0% |
| AGTTCCCTATGCTTGTGGAC+AGG | + | chr2.1:70772694-70772713 | None:intergenic | 50.0% | |
| CACAAGCATAGGGAACTTCG+TGG | - | chr2.1:70772697-70772716 | MS.gene002484:CDS | 50.0% | |
| CACGAAGTTCCCTATGCTTG+TGG | + | chr2.1:70772699-70772718 | None:intergenic | 50.0% | |
| CCAATCCTGTCCACAAGCAT+AGG | - | chr2.1:70772686-70772705 | MS.gene002484:CDS | 50.0% | |
| CCTATGCTTGTGGACAGGAT+TGG | + | chr2.1:70772689-70772708 | None:intergenic | 50.0% | |
| GAGTAAGAGATCTGTTGCCG+AGG | - | chr2.1:70772519-70772538 | MS.gene002484:intron | 50.0% | |
| TACGTAGAGGTGGGAGAAAG+AGG | - | chr2.1:70772428-70772447 | MS.gene002484:intron | 50.0% | |
| TGAGATTCATGCAGCGTGTG+AGG | - | chr2.1:70772050-70772069 | MS.gene002484:CDS | 50.0% | |
| ! | AGAAAGAGGCCGGTTTCCAA+GGG | - | chr2.1:70772442-70772461 | MS.gene002484:intron | 50.0% |
| ! | TTTGGGTTACAAGGCCAAGC+AGG | - | chr2.1:70772144-70772163 | MS.gene002484:CDS | 50.0% |
| !! | GCTTGGCCTTGTAACCCAAA+CGG | + | chr2.1:70772144-70772163 | None:intergenic | 50.0% |
| AGTTTGCCCTGCGAGATGGA+CGG | + | chr2.1:70772786-70772805 | None:intergenic | 55.0% | |
| ATACGGGAAGCCCACTAACC+AGG | - | chr2.1:70772471-70772490 | MS.gene002484:intron | 55.0% | |
| CACCTCTACGTACCCTCACT+CGG | + | chr2.1:70772420-70772439 | None:intergenic | 55.0% | |
| CCTGACAAAGCTCGCCGTTT+GGG | - | chr2.1:70772127-70772146 | MS.gene002484:CDS | 55.0% | |
| CTTCGTGGTCTCACTTCTGC+TGG | - | chr2.1:70772712-70772731 | MS.gene002484:CDS | 55.0% | |
| GGGTCTGGTGAGACGAACAA+TGG | + | chr2.1:70772101-70772120 | None:intergenic | 55.0% | |
| TACGGGAAGCCCACTAACCA+GGG | - | chr2.1:70772472-70772491 | MS.gene002484:intron | 55.0% | |
| TAGAGGTGGGAGAAAGAGGC+CGG | - | chr2.1:70772432-70772451 | MS.gene002484:intron | 55.0% | |
| TCATGCAGCGTGTGAGGTGT+TGG | - | chr2.1:70772056-70772075 | MS.gene002484:CDS | 55.0% | |
| TCCTGACAAAGCTCGCCGTT+TGG | - | chr2.1:70772126-70772145 | MS.gene002484:CDS | 55.0% | |
| TTCCAGTTTGCCCTGCGAGA+TGG | + | chr2.1:70772790-70772809 | None:intergenic | 55.0% | |
| TTTGTCAGGACGAGTGGGTC+TGG | + | chr2.1:70772116-70772135 | None:intergenic | 55.0% | |
| ! | AGCTCGCCGTTTGGGTTACA+AGG | - | chr2.1:70772135-70772154 | MS.gene002484:CDS | 55.0% |
| ! | CATGCAGCGTGTGAGGTGTT+GGG | - | chr2.1:70772057-70772076 | MS.gene002484:CDS | 55.0% |
| ! | CGAGCTTTGTCAGGACGAGT+GGG | + | chr2.1:70772121-70772140 | None:intergenic | 55.0% |
| ! | GAGAAAGAGGCCGGTTTCCA+AGG | - | chr2.1:70772441-70772460 | MS.gene002484:intron | 55.0% |
| ! | GAGGAAGCTTGGTGGCCTTA+GGG | - | chr2.1:70772552-70772571 | MS.gene002484:intron | 55.0% |
| ! | GAGTGAGGGTACGTAGAGGT+GGG | - | chr2.1:70772419-70772438 | MS.gene002484:intron | 55.0% |
| ! | TACCGAGTGAGGGTACGTAG+AGG | - | chr2.1:70772415-70772434 | MS.gene002484:intron | 55.0% |
| ACAAAGCCCGTCCATCTCGC+AGG | - | chr2.1:70772776-70772795 | MS.gene002484:intron | 60.0% | |
| CAAAGCCCGTCCATCTCGCA+GGG | - | chr2.1:70772777-70772796 | MS.gene002484:intron | 60.0% | |
| GTCCATCTCGCAGGGCAAAC+TGG | - | chr2.1:70772785-70772804 | MS.gene002484:intron | 60.0% | |
| GTTTGCCCTGCGAGATGGAC+GGG | + | chr2.1:70772785-70772804 | None:intergenic | 60.0% | |
| ! | CCCAAACGGCGAGCTTTGTC+AGG | + | chr2.1:70772130-70772149 | None:intergenic | 60.0% |
| ! | CGAGTGAGGGTACGTAGAGG+TGG | - | chr2.1:70772418-70772437 | MS.gene002484:intron | 60.0% |
| ! | GCGAGCTTTGTCAGGACGAG+TGG | + | chr2.1:70772122-70772141 | None:intergenic | 60.0% |
| ! | GGAGGAAGCTTGGTGGCCTT+AGG | - | chr2.1:70772551-70772570 | MS.gene002484:intron | 60.0% |
| ! | TGCGAGATGGACGGGCTTTG+TGG | + | chr2.1:70772777-70772796 | None:intergenic | 60.0% |
| CGTGCTGGGAGGAAGCTTGG+TGG | - | chr2.1:70772544-70772563 | MS.gene002484:intron | 65.0% | |
| CTTCCTCCCAGCACGCTCCT+CGG | + | chr2.1:70772539-70772558 | None:intergenic | 65.0% | |
| GAGCGTGCTGGGAGGAAGCT+TGG | - | chr2.1:70772541-70772560 | MS.gene002484:intron | 65.0% | |
| ! | CTGTTGCCGAGGAGCGTGCT+GGG | - | chr2.1:70772530-70772549 | MS.gene002484:intron | 65.0% |
| ! | TCTGTTGCCGAGGAGCGTGC+TGG | - | chr2.1:70772529-70772548 | MS.gene002484:intron | 65.0% |
| ! | TTGCCGAGGAGCGTGCTGGG+AGG | - | chr2.1:70772533-70772552 | MS.gene002484:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 70771901 | 70772846 | 70771901 | ID=MS.gene002484 |
| chr2.1 | mRNA | 70771901 | 70772846 | 70771901 | ID=MS.gene002484.t1;Parent=MS.gene002484 |
| chr2.1 | exon | 70772843 | 70772846 | 70772843 | ID=MS.gene002484.t1.exon1;Parent=MS.gene002484.t1 |
| chr2.1 | CDS | 70772843 | 70772846 | 70772843 | ID=cds.MS.gene002484.t1;Parent=MS.gene002484.t1 |
| chr2.1 | exon | 70772582 | 70772748 | 70772582 | ID=MS.gene002484.t1.exon2;Parent=MS.gene002484.t1 |
| chr2.1 | CDS | 70772582 | 70772748 | 70772582 | ID=cds.MS.gene002484.t1;Parent=MS.gene002484.t1 |
| chr2.1 | exon | 70771901 | 70772344 | 70771901 | ID=MS.gene002484.t1.exon3;Parent=MS.gene002484.t1 |
| chr2.1 | CDS | 70771901 | 70772344 | 70771901 | ID=cds.MS.gene002484.t1;Parent=MS.gene002484.t1 |
| Gene Sequence |
| Protein sequence |