Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047337.t1 | XP_013461067.1 | 100 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 4.20E-111 | 410.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047337.t1 | O82528 | 88.2 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 2.2e-100 | 366.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047337.t1 | I3T9M3 | 100.0 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 3.1e-111 | 410.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene036800 | MS.gene047337 | PPI |
MS.gene59047 | MS.gene047337 | PPI |
MS.gene047337 | MS.gene25903 | PPI |
MS.gene002484 | MS.gene047337 | PPI |
MS.gene038837 | MS.gene047337 | PPI |
MS.gene61498 | MS.gene047337 | PPI |
MS.gene01456 | MS.gene047337 | PPI |
MS.gene01057 | MS.gene047337 | PPI |
MS.gene045843 | MS.gene047337 | PPI |
MS.gene022249 | MS.gene047337 | PPI |
MS.gene62426 | MS.gene047337 | PPI |
MS.gene074400 | MS.gene047337 | PPI |
MS.gene70579 | MS.gene047337 | PPI |
MS.gene067362 | MS.gene047337 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047337.t1 | MTR_3g078653 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 8.57e-150 | 414 |
MS.gene047337.t1 | MTR_2g014220 | 99.510 | 204 | 1 | 0 | 1 | 204 | 49 | 252 | 2.38e-149 | 415 |
MS.gene047337.t1 | MTR_7g026915 | 94.915 | 59 | 3 | 0 | 1 | 59 | 1 | 59 | 3.81e-33 | 125 |
MS.gene047337.t1 | MTR_7g026915 | 87.500 | 64 | 8 | 0 | 1 | 64 | 1 | 64 | 1.52e-31 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047337.t1 | AT4G16720 | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 8.64e-122 | 343 |
MS.gene047337.t1 | AT4G17390 | 87.745 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.80e-121 | 342 |
Find 77 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGAAGCTTGGTGGCCTT+AGG | 0.282780 | 2.3:-70560434 | MS.gene047337:CDS |
GTTTCCAAGGGTATTGTATA+CGG | 0.297546 | 2.3:-70560531 | MS.gene047337:CDS |
TTGGTAAGCCAGTTGATTCT+TGG | 0.325346 | 2.3:+70560318 | None:intergenic |
TCCTGACAAAGCTCGCCGTT+TGG | 0.353079 | 2.3:-70560859 | MS.gene047337:CDS |
ACAAGTATGTTTCTGAGTTA+TGG | 0.369598 | 2.3:-70560980 | MS.gene047337:CDS |
TTAGGGTTCTCAATTCCTAC+TGG | 0.369741 | 2.3:-70560416 | MS.gene047337:CDS |
CCTGACAAAGCTCGCCGTTT+GGG | 0.382164 | 2.3:-70560858 | MS.gene047337:CDS |
GTCCTTCCCGCAGGGCAAAC+TGG | 0.382984 | 2.3:-70560200 | MS.gene047337:CDS |
GAGGAAGCTTGGTGGCCTTA+GGG | 0.392690 | 2.3:-70560433 | MS.gene047337:CDS |
TGCGGGAAGGACGGGCTTTG+TGG | 0.410020 | 2.3:+70560211 | None:intergenic |
TCTCTTCCAGTTTGCCCTGC+GGG | 0.416755 | 2.3:+70560194 | None:intergenic |
AATGACCTCAAAATACTTGA+AGG | 0.426532 | 2.3:+70560377 | None:intergenic |
AGCTCGCCGTTTGGGTTACA+AGG | 0.427870 | 2.3:-70560850 | MS.gene047337:CDS |
TCTGTTGCCGAGGAGCGTGC+TGG | 0.428375 | 2.3:-70560456 | MS.gene047337:CDS |
CCCAAACGGCGAGCTTTGTC+AGG | 0.428600 | 2.3:+70560858 | None:intergenic |
GTTTGCCCTGCGGGAAGGAC+GGG | 0.445042 | 2.3:+70560203 | None:intergenic |
TTTGTCAGGACGAGTGGGTC+TGG | 0.461552 | 2.3:+70560872 | None:intergenic |
AGTTTGCCCTGCGGGAAGGA+CGG | 0.463498 | 2.3:+70560202 | None:intergenic |
TATACAATACCCTTGGAAAC+CGG | 0.467374 | 2.3:+70560534 | None:intergenic |
CTGTTGCCGAGGAGCGTGCT+GGG | 0.471029 | 2.3:-70560455 | MS.gene047337:CDS |
GAGCGTGCTGGGAGGAAGCT+TGG | 0.477629 | 2.3:-70560444 | MS.gene047337:CDS |
CCAATCCTGTCCACAAGCAT+AGG | 0.488032 | 2.3:-70560299 | MS.gene047337:CDS |
TTACTCAACTTAAGTTTCAA+AGG | 0.490055 | 2.3:-70560488 | MS.gene047337:CDS |
TACGTAGAGGTGGGAGAAAG+AGG | 0.490900 | 2.3:-70560557 | MS.gene047337:CDS |
CTTCGTGGTCTCACTTCTGC+TGG | 0.495517 | 2.3:-70560273 | MS.gene047337:CDS |
TTGAGTAACTCCCTGGTTAG+TGG | 0.499501 | 2.3:+70560503 | None:intergenic |
TCATGCAGCGTGTGAGGTGT+TGG | 0.501162 | 2.3:-70560929 | MS.gene047337:CDS |
ACAAAGCCCGTCCTTCCCGC+AGG | 0.505243 | 2.3:-70560209 | MS.gene047337:CDS |
CATGCAGCGTGTGAGGTGTT+GGG | 0.510206 | 2.3:-70560928 | MS.gene047337:CDS |
GAGAAAGAGGCCGGTTTCCA+AGG | 0.516642 | 2.3:-70560544 | MS.gene047337:CDS |
TGAGTAACTCCCTGGTTAGT+GGG | 0.518159 | 2.3:+70560504 | None:intergenic |
CCTATGCTTGTGGACAGGAT+TGG | 0.520921 | 2.3:+70560299 | None:intergenic |
TTCCAGTTTGCCCTGCGGGA+AGG | 0.525009 | 2.3:+70560198 | None:intergenic |
CACGAAGTTCCCTATGCTTG+TGG | 0.529755 | 2.3:+70560289 | None:intergenic |
GAAATGATCCAAGAATCAAC+TGG | 0.530060 | 2.3:-70560326 | MS.gene047337:CDS |
TTTCCAAGGGTATTGTATAC+GGG | 0.532253 | 2.3:-70560530 | MS.gene047337:CDS |
TTTGGGTTACAAGGCCAAGC+AGG | 0.540516 | 2.3:-70560841 | MS.gene047337:intron |
AGTTCCCTATGCTTGTGGAC+AGG | 0.542094 | 2.3:+70560294 | None:intergenic |
CGTGCTGGGAGGAAGCTTGG+TGG | 0.543008 | 2.3:-70560441 | MS.gene047337:CDS |
ATACGGGAAGCCCACTAACC+AGG | 0.546286 | 2.3:-70560514 | MS.gene047337:CDS |
GCGAGCTTTGTCAGGACGAG+TGG | 0.547527 | 2.3:+70560866 | None:intergenic |
TAGGGTTCTCAATTCCTACT+GGG | 0.548434 | 2.3:-70560415 | MS.gene047337:CDS |
AACAGAGGTTTGAGTGGCAA+GGG | 0.550062 | 2.3:-70560243 | MS.gene047337:CDS |
CTTCCTCCCAGCACGCTCCT+CGG | 0.550992 | 2.3:+70560449 | None:intergenic |
CACCTCTACGTACCCTCACT+CGG | 0.553002 | 2.3:+70560568 | None:intergenic |
AAGAATAGATGATACCTGCT+TGG | 0.559188 | 2.3:+70560827 | None:intergenic |
CAATCCTGTCCACAAGCATA+GGG | 0.561253 | 2.3:-70560298 | MS.gene047337:CDS |
ACTTAAGTTGAGTAACTCCC+TGG | 0.562594 | 2.3:+70560496 | None:intergenic |
CTTCCCGTATACAATACCCT+TGG | 0.574843 | 2.3:+70560527 | None:intergenic |
CAATTCCTACTGGGTCAATG+AGG | 0.583661 | 2.3:-70560406 | MS.gene047337:CDS |
AGAAAGAGGCCGGTTTCCAA+GGG | 0.585417 | 2.3:-70560543 | MS.gene047337:CDS |
AAACAGAGGTTTGAGTGGCA+AGG | 0.585660 | 2.3:-70560244 | MS.gene047337:CDS |
TTCTCTTCCAGTTTGCCCTG+CGG | 0.587901 | 2.3:+70560193 | None:intergenic |
CGAGTGAGGGTACGTAGAGG+TGG | 0.590318 | 2.3:-70560567 | MS.gene047337:CDS |
GCTTGGCCTTGTAACCCAAA+CGG | 0.594502 | 2.3:+70560844 | None:intergenic |
TAGAGGTGGGAGAAAGAGGC+CGG | 0.597426 | 2.3:-70560553 | MS.gene047337:CDS |
CACAAGCATAGGGAACTTCG+TGG | 0.602517 | 2.3:-70560288 | MS.gene047337:CDS |
CAAAGCCCGTCCTTCCCGCA+GGG | 0.606273 | 2.3:-70560208 | MS.gene047337:CDS |
GAGTAAGAGATCTGTTGCCG+AGG | 0.608981 | 2.3:-70560466 | MS.gene047337:CDS |
TACGGGAAGCCCACTAACCA+GGG | 0.619308 | 2.3:-70560513 | MS.gene047337:CDS |
GTTATGTTGTGTACCGAGTG+AGG | 0.619671 | 2.3:-70560581 | MS.gene047337:CDS |
AGAATCCTCATTGACCCAGT+AGG | 0.619890 | 2.3:+70560401 | None:intergenic |
CGAGCTTTGTCAGGACGAGT+GGG | 0.623786 | 2.3:+70560867 | None:intergenic |
GGGTCTGGTGAGACGAACAA+TGG | 0.629081 | 2.3:+70560887 | None:intergenic |
GACGGGCTTTGTGGTAACGA+TGG | 0.630329 | 2.3:+70560220 | None:intergenic |
ACGATAACGACGGAGAGACA+AGG | 0.632844 | 2.3:+70560164 | None:intergenic |
TGAGATTCATGCAGCGTGTG+AGG | 0.638236 | 2.3:-70560935 | MS.gene047337:CDS |
AAAGAAAACAGAGGTTTGAG+TGG | 0.638472 | 2.3:-70560249 | MS.gene047337:CDS |
AGTATGTTTCTGAGTTATGG+CGG | 0.642445 | 2.3:-70560977 | MS.gene047337:CDS |
AGTAGGAATTGAGAACCCTA+AGG | 0.644888 | 2.3:+70560418 | None:intergenic |
TTATGTTGTGTACCGAGTGA+GGG | 0.645103 | 2.3:-70560580 | MS.gene047337:CDS |
TTGCCGAGGAGCGTGCTGGG+AGG | 0.662735 | 2.3:-70560452 | MS.gene047337:CDS |
GTTATGGCGGAAGAAGCAAT+CGG | 0.676275 | 2.3:-70560964 | MS.gene047337:CDS |
TCTGCTGGTAAAGAAAACAG+AGG | 0.678817 | 2.3:-70560258 | MS.gene047337:CDS |
GAGTGAGGGTACGTAGAGGT+GGG | 0.682033 | 2.3:-70560566 | MS.gene047337:CDS |
AGTAAAATCAACGATAACGA+CGG | 0.699472 | 2.3:+70560154 | None:intergenic |
TACCGAGTGAGGGTACGTAG+AGG | 0.717794 | 2.3:-70560570 | MS.gene047337:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAGCTTATTATTGATA+AGG | + | chr2.3:70560461-70560480 | None:intergenic | 20.0% |
!! | CATCAATATAAGTTCTATTA+AGG | + | chr2.3:70560596-70560615 | None:intergenic | 20.0% |
!!! | ATTTGAACTTCATTGATTTT+AGG | - | chr2.3:70560641-70560660 | MS.gene047337:intron | 20.0% |
!!! | GTTATTTGTGAATTTTGAAT+AGG | - | chr2.3:70560237-70560256 | MS.gene047337:CDS | 20.0% |
!!! | TTTGAACTTCATTGATTTTA+GGG | - | chr2.3:70560642-70560661 | MS.gene047337:intron | 20.0% |
! | AGAAAGAATTAAAGCATGTT+TGG | + | chr2.3:70560526-70560545 | None:intergenic | 25.0% |
! | TTACTCAACTTAAGTTTCAA+AGG | - | chr2.3:70560757-70560776 | MS.gene047337:intron | 25.0% |
AATGACCTCAAAATACTTGA+AGG | + | chr2.3:70560871-70560890 | None:intergenic | 30.0% | |
GAATTAAAGCATGTTTGGAT+TGG | + | chr2.3:70560521-70560540 | None:intergenic | 30.0% | |
! | ACAAGTATGTTTCTGAGTTA+TGG | - | chr2.3:70560265-70560284 | MS.gene047337:CDS | 30.0% |
! | TTCTACCTTCAAGTATTTTG+AGG | - | chr2.3:70560863-70560882 | MS.gene047337:CDS | 30.0% |
!!! | CAAGTATTTTGAGGTCATTT+TGG | - | chr2.3:70560872-70560891 | MS.gene047337:CDS | 30.0% |
AAAGAAAACAGAGGTTTGAG+TGG | - | chr2.3:70560996-70561015 | MS.gene047337:intron | 35.0% | |
AAGAATAGATGATACCTGCT+TGG | + | chr2.3:70560421-70560440 | None:intergenic | 35.0% | |
GAAATGATCCAAGAATCAAC+TGG | - | chr2.3:70560919-70560938 | MS.gene047337:CDS | 35.0% | |
TATACAATACCCTTGGAAAC+CGG | + | chr2.3:70560714-70560733 | None:intergenic | 35.0% | |
! | AGTATGTTTCTGAGTTATGG+CGG | - | chr2.3:70560268-70560287 | MS.gene047337:CDS | 35.0% |
!! | CTGTTTCTATTCATTCTCTC+TGG | - | chr2.3:70560189-70560208 | MS.gene047337:CDS | 35.0% |
!! | GTTTCCAAGGGTATTGTATA+CGG | - | chr2.3:70560714-70560733 | MS.gene047337:intron | 35.0% |
!! | TTTCCAAGGGTATTGTATAC+GGG | - | chr2.3:70560715-70560734 | MS.gene047337:intron | 35.0% |
AGTAGGAATTGAGAACCCTA+AGG | + | chr2.3:70560830-70560849 | None:intergenic | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | - | chr2.3:70560830-70560849 | MS.gene047337:intron | 40.0% | |
TCTGCTGGTAAAGAAAACAG+AGG | - | chr2.3:70560987-70561006 | MS.gene047337:CDS | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | - | chr2.3:70560829-70560848 | MS.gene047337:intron | 40.0% | |
TTATGTTGTGTACCGAGTGA+GGG | - | chr2.3:70560665-70560684 | MS.gene047337:intron | 40.0% | |
! | TTGGTAAGCCAGTTGATTCT+TGG | + | chr2.3:70560930-70560949 | None:intergenic | 40.0% |
!! | ACTTAAGTTGAGTAACTCCC+TGG | + | chr2.3:70560752-70560771 | None:intergenic | 40.0% |
AAACAGAGGTTTGAGTGGCA+AGG | - | chr2.3:70561001-70561020 | MS.gene047337:intron | 45.0% | |
AACAGAGGTTTGAGTGGCAA+GGG | - | chr2.3:70561002-70561021 | MS.gene047337:intron | 45.0% | |
AGAATCCTCATTGACCCAGT+AGG | + | chr2.3:70560847-70560866 | None:intergenic | 45.0% | |
CAATCCTGTCCACAAGCATA+GGG | - | chr2.3:70560947-70560966 | MS.gene047337:CDS | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | - | chr2.3:70560839-70560858 | MS.gene047337:intron | 45.0% | |
CTTCCCGTATACAATACCCT+TGG | + | chr2.3:70560721-70560740 | None:intergenic | 45.0% | |
GAAACAGCAGCTGCAATAGA+TGG | + | chr2.3:70560176-70560195 | None:intergenic | 45.0% | |
GTTATGTTGTGTACCGAGTG+AGG | - | chr2.3:70560664-70560683 | MS.gene047337:intron | 45.0% | |
TGAGTAACTCCCTGGTTAGT+GGG | + | chr2.3:70560744-70560763 | None:intergenic | 45.0% | |
TTGAGTAACTCCCTGGTTAG+TGG | + | chr2.3:70560745-70560764 | None:intergenic | 45.0% | |
! | GTTATGGCGGAAGAAGCAAT+CGG | - | chr2.3:70560281-70560300 | MS.gene047337:CDS | 45.0% |
ACGATAACGACGGAGAGACA+AGG | + | chr2.3:70561084-70561103 | None:intergenic | 50.0% | |
AGTTCCCTATGCTTGTGGAC+AGG | + | chr2.3:70560954-70560973 | None:intergenic | 50.0% | |
CACAAGCATAGGGAACTTCG+TGG | - | chr2.3:70560957-70560976 | MS.gene047337:CDS | 50.0% | |
CACGAAGTTCCCTATGCTTG+TGG | + | chr2.3:70560959-70560978 | None:intergenic | 50.0% | |
CCAATCCTGTCCACAAGCAT+AGG | - | chr2.3:70560946-70560965 | MS.gene047337:CDS | 50.0% | |
CCTATGCTTGTGGACAGGAT+TGG | + | chr2.3:70560949-70560968 | None:intergenic | 50.0% | |
GAGTAAGAGATCTGTTGCCG+AGG | - | chr2.3:70560779-70560798 | MS.gene047337:intron | 50.0% | |
TACGTAGAGGTGGGAGAAAG+AGG | - | chr2.3:70560688-70560707 | MS.gene047337:intron | 50.0% | |
TGAGATTCATGCAGCGTGTG+AGG | - | chr2.3:70560310-70560329 | MS.gene047337:CDS | 50.0% | |
TTCTCTTCCAGTTTGCCCTG+CGG | + | chr2.3:70561055-70561074 | None:intergenic | 50.0% | |
! | AGAAAGAGGCCGGTTTCCAA+GGG | - | chr2.3:70560702-70560721 | MS.gene047337:intron | 50.0% |
! | TTTGGGTTACAAGGCCAAGC+AGG | - | chr2.3:70560404-70560423 | MS.gene047337:CDS | 50.0% |
!! | GCTTGGCCTTGTAACCCAAA+CGG | + | chr2.3:70560404-70560423 | None:intergenic | 50.0% |
ATACGGGAAGCCCACTAACC+AGG | - | chr2.3:70560731-70560750 | MS.gene047337:intron | 55.0% | |
CACCTCTACGTACCCTCACT+CGG | + | chr2.3:70560680-70560699 | None:intergenic | 55.0% | |
CCTGACAAAGCTCGCCGTTT+GGG | - | chr2.3:70560387-70560406 | MS.gene047337:CDS | 55.0% | |
CTTCGTGGTCTCACTTCTGC+TGG | - | chr2.3:70560972-70560991 | MS.gene047337:CDS | 55.0% | |
GGGTCTGGTGAGACGAACAA+TGG | + | chr2.3:70560361-70560380 | None:intergenic | 55.0% | |
TACGGGAAGCCCACTAACCA+GGG | - | chr2.3:70560732-70560751 | MS.gene047337:intron | 55.0% | |
TAGAGGTGGGAGAAAGAGGC+CGG | - | chr2.3:70560692-70560711 | MS.gene047337:intron | 55.0% | |
TCATGCAGCGTGTGAGGTGT+TGG | - | chr2.3:70560316-70560335 | MS.gene047337:CDS | 55.0% | |
TCCTGACAAAGCTCGCCGTT+TGG | - | chr2.3:70560386-70560405 | MS.gene047337:CDS | 55.0% | |
TCTCTTCCAGTTTGCCCTGC+GGG | + | chr2.3:70561054-70561073 | None:intergenic | 55.0% | |
TTTGTCAGGACGAGTGGGTC+TGG | + | chr2.3:70560376-70560395 | None:intergenic | 55.0% | |
! | AGCTCGCCGTTTGGGTTACA+AGG | - | chr2.3:70560395-70560414 | MS.gene047337:CDS | 55.0% |
! | CATGCAGCGTGTGAGGTGTT+GGG | - | chr2.3:70560317-70560336 | MS.gene047337:CDS | 55.0% |
! | CGAGCTTTGTCAGGACGAGT+GGG | + | chr2.3:70560381-70560400 | None:intergenic | 55.0% |
! | GACGGGCTTTGTGGTAACGA+TGG | + | chr2.3:70561028-70561047 | None:intergenic | 55.0% |
! | GAGAAAGAGGCCGGTTTCCA+AGG | - | chr2.3:70560701-70560720 | MS.gene047337:intron | 55.0% |
! | GAGGAAGCTTGGTGGCCTTA+GGG | - | chr2.3:70560812-70560831 | MS.gene047337:intron | 55.0% |
! | GAGTGAGGGTACGTAGAGGT+GGG | - | chr2.3:70560679-70560698 | MS.gene047337:intron | 55.0% |
! | TACCGAGTGAGGGTACGTAG+AGG | - | chr2.3:70560675-70560694 | MS.gene047337:intron | 55.0% |
AGTTTGCCCTGCGGGAAGGA+CGG | + | chr2.3:70561046-70561065 | None:intergenic | 60.0% | |
TTCCAGTTTGCCCTGCGGGA+AGG | + | chr2.3:70561050-70561069 | None:intergenic | 60.0% | |
! | CCCAAACGGCGAGCTTTGTC+AGG | + | chr2.3:70560390-70560409 | None:intergenic | 60.0% |
! | CGAGTGAGGGTACGTAGAGG+TGG | - | chr2.3:70560678-70560697 | MS.gene047337:intron | 60.0% |
! | GCGAGCTTTGTCAGGACGAG+TGG | + | chr2.3:70560382-70560401 | None:intergenic | 60.0% |
! | GGAGGAAGCTTGGTGGCCTT+AGG | - | chr2.3:70560811-70560830 | MS.gene047337:intron | 60.0% |
ACAAAGCCCGTCCTTCCCGC+AGG | - | chr2.3:70561036-70561055 | MS.gene047337:intron | 65.0% | |
CAAAGCCCGTCCTTCCCGCA+GGG | - | chr2.3:70561037-70561056 | MS.gene047337:intron | 65.0% | |
CGTGCTGGGAGGAAGCTTGG+TGG | - | chr2.3:70560804-70560823 | MS.gene047337:intron | 65.0% | |
CTTCCTCCCAGCACGCTCCT+CGG | + | chr2.3:70560799-70560818 | None:intergenic | 65.0% | |
GAGCGTGCTGGGAGGAAGCT+TGG | - | chr2.3:70560801-70560820 | MS.gene047337:intron | 65.0% | |
GTCCTTCCCGCAGGGCAAAC+TGG | - | chr2.3:70561045-70561064 | MS.gene047337:intron | 65.0% | |
GTTTGCCCTGCGGGAAGGAC+GGG | + | chr2.3:70561045-70561064 | None:intergenic | 65.0% | |
! | CTGTTGCCGAGGAGCGTGCT+GGG | - | chr2.3:70560790-70560809 | MS.gene047337:intron | 65.0% |
! | TCTGTTGCCGAGGAGCGTGC+TGG | - | chr2.3:70560789-70560808 | MS.gene047337:intron | 65.0% |
! | TGCGGGAAGGACGGGCTTTG+TGG | + | chr2.3:70561037-70561056 | None:intergenic | 65.0% |
! | TTGCCGAGGAGCGTGCTGGG+AGG | - | chr2.3:70560793-70560812 | MS.gene047337:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 70560161 | 70561106 | 70560161 | ID=MS.gene047337 |
chr2.3 | mRNA | 70560161 | 70561106 | 70560161 | ID=MS.gene047337.t1;Parent=MS.gene047337 |
chr2.3 | exon | 70561103 | 70561106 | 70561103 | ID=MS.gene047337.t1.exon1;Parent=MS.gene047337.t1 |
chr2.3 | CDS | 70561103 | 70561106 | 70561103 | ID=cds.MS.gene047337.t1;Parent=MS.gene047337.t1 |
chr2.3 | exon | 70560842 | 70561008 | 70560842 | ID=MS.gene047337.t1.exon2;Parent=MS.gene047337.t1 |
chr2.3 | CDS | 70560842 | 70561008 | 70560842 | ID=cds.MS.gene047337.t1;Parent=MS.gene047337.t1 |
chr2.3 | exon | 70560161 | 70560604 | 70560161 | ID=MS.gene047337.t1.exon3;Parent=MS.gene047337.t1 |
chr2.3 | CDS | 70560161 | 70560604 | 70560161 | ID=cds.MS.gene047337.t1;Parent=MS.gene047337.t1 |
Gene Sequence |
Protein sequence |