Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01057.t1 | XP_013461067.1 | 100 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 4.20E-111 | 410.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01057.t1 | O82528 | 88.2 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 2.2e-100 | 366.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01057.t1 | I3T9M3 | 100.0 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 3.1e-111 | 410.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene074400 | MS.gene01057 | PPI |
MS.gene067362 | MS.gene01057 | PPI |
MS.gene036800 | MS.gene01057 | PPI |
MS.gene01057 | MS.gene25903 | PPI |
MS.gene002484 | MS.gene01057 | PPI |
MS.gene59047 | MS.gene01057 | PPI |
MS.gene01057 | MS.gene70579 | PPI |
MS.gene01057 | MS.gene022249 | PPI |
MS.gene01057 | MS.gene067362 | PPI |
MS.gene038837 | MS.gene01057 | PPI |
MS.gene01057 | MS.gene62426 | PPI |
MS.gene01057 | MS.gene047337 | PPI |
MS.gene61498 | MS.gene01057 | PPI |
MS.gene01456 | MS.gene01057 | PPI |
MS.gene045843 | MS.gene01057 | PPI |
MS.gene62426 | MS.gene01057 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01057.t1 | MTR_3g078653 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 8.57e-150 | 414 |
MS.gene01057.t1 | MTR_2g014220 | 99.510 | 204 | 1 | 0 | 1 | 204 | 49 | 252 | 2.38e-149 | 415 |
MS.gene01057.t1 | MTR_7g026915 | 94.915 | 59 | 3 | 0 | 1 | 59 | 1 | 59 | 3.81e-33 | 125 |
MS.gene01057.t1 | MTR_7g026915 | 87.500 | 64 | 8 | 0 | 1 | 64 | 1 | 64 | 1.52e-31 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01057.t1 | AT4G16720 | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 8.64e-122 | 343 |
MS.gene01057.t1 | AT4G17390 | 87.745 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.80e-121 | 342 |
Find 79 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGAAGCTTGGTGGCCTT+AGG | 0.282780 | 2.4:-70646041 | MS.gene01057:CDS |
GTTTCCAAGGGTATTGTATA+CGG | 0.297546 | 2.4:-70646138 | MS.gene01057:CDS |
CAAGTATTTCGAGGTCATTT+TGG | 0.317500 | 2.4:-70645980 | MS.gene01057:CDS |
TTGGTAAGCCAGTTGATTCT+TGG | 0.325346 | 2.4:+70645925 | None:intergenic |
TCCTGACAAAGCTCGCCGTT+TGG | 0.353079 | 2.4:-70646466 | MS.gene01057:CDS |
ACAAGTATGTTTCTGAGTTA+TGG | 0.369598 | 2.4:-70646587 | MS.gene01057:CDS |
TTAGGGTTCTCAATTCCTAC+TGG | 0.369741 | 2.4:-70646023 | MS.gene01057:CDS |
CCTGACAAAGCTCGCCGTTT+GGG | 0.382164 | 2.4:-70646465 | MS.gene01057:CDS |
GTCCTTCCCGCAGGGCAAAC+TGG | 0.382984 | 2.4:-70645807 | MS.gene01057:CDS |
GAGGAAGCTTGGTGGCCTTA+GGG | 0.392690 | 2.4:-70646040 | MS.gene01057:CDS |
TGCGGGAAGGACGGGCTTTG+TGG | 0.410020 | 2.4:+70645818 | None:intergenic |
TCTCTTCCAGTTTGCCCTGC+GGG | 0.416755 | 2.4:+70645801 | None:intergenic |
AGCTCGCCGTTTGGGTTACA+AGG | 0.427870 | 2.4:-70646457 | MS.gene01057:CDS |
TCTGTTGCCGAGGAGCGTGC+TGG | 0.428375 | 2.4:-70646063 | MS.gene01057:CDS |
CCCAAACGGCGAGCTTTGTC+AGG | 0.428600 | 2.4:+70646465 | None:intergenic |
GTTTGCCCTGCGGGAAGGAC+GGG | 0.445042 | 2.4:+70645810 | None:intergenic |
TTTGTCAGGACGAGTGGGTC+TGG | 0.461552 | 2.4:+70646479 | None:intergenic |
AATGACCTCGAAATACTTGA+AGG | 0.462538 | 2.4:+70645984 | None:intergenic |
AGTTTGCCCTGCGGGAAGGA+CGG | 0.463498 | 2.4:+70645809 | None:intergenic |
TATACAATACCCTTGGAAAC+CGG | 0.467374 | 2.4:+70646141 | None:intergenic |
CTGTTGCCGAGGAGCGTGCT+GGG | 0.471029 | 2.4:-70646062 | MS.gene01057:CDS |
GAGCGTGCTGGGAGGAAGCT+TGG | 0.477629 | 2.4:-70646051 | MS.gene01057:CDS |
TTCTACCTTCAAGTATTTCG+AGG | 0.487663 | 2.4:-70645989 | MS.gene01057:CDS |
CCAATCCTGTCCACAAGCAT+AGG | 0.488032 | 2.4:-70645906 | MS.gene01057:CDS |
TTACTCAACTTAAGTTTCAA+AGG | 0.490055 | 2.4:-70646095 | MS.gene01057:CDS |
TACGTAGAGGTGGGAGAAAG+AGG | 0.490900 | 2.4:-70646164 | MS.gene01057:CDS |
CTTCGTGGTCTCACTTCTGC+TGG | 0.495517 | 2.4:-70645880 | MS.gene01057:CDS |
TTGAGTAACTCCCTGGTTAG+TGG | 0.499501 | 2.4:+70646110 | None:intergenic |
TCATGCAGCGTGTGAGGTGT+TGG | 0.501162 | 2.4:-70646536 | MS.gene01057:CDS |
ACAAAGCCCGTCCTTCCCGC+AGG | 0.505243 | 2.4:-70645816 | MS.gene01057:CDS |
CATGCAGCGTGTGAGGTGTT+GGG | 0.510206 | 2.4:-70646535 | MS.gene01057:CDS |
GAGAAAGAGGCCGGTTTCCA+AGG | 0.516642 | 2.4:-70646151 | MS.gene01057:CDS |
TGAGTAACTCCCTGGTTAGT+GGG | 0.518159 | 2.4:+70646111 | None:intergenic |
CCTATGCTTGTGGACAGGAT+TGG | 0.520921 | 2.4:+70645906 | None:intergenic |
TTCCAGTTTGCCCTGCGGGA+AGG | 0.525009 | 2.4:+70645805 | None:intergenic |
CACGAAGTTCCCTATGCTTG+TGG | 0.529755 | 2.4:+70645896 | None:intergenic |
GAAATGATCCAAGAATCAAC+TGG | 0.530060 | 2.4:-70645933 | MS.gene01057:CDS |
TTTCCAAGGGTATTGTATAC+GGG | 0.532253 | 2.4:-70646137 | MS.gene01057:CDS |
TTTGGGTTACAAGGCCAAGC+AGG | 0.540516 | 2.4:-70646448 | MS.gene01057:intron |
AGTTCCCTATGCTTGTGGAC+AGG | 0.542094 | 2.4:+70645901 | None:intergenic |
CGTGCTGGGAGGAAGCTTGG+TGG | 0.543008 | 2.4:-70646048 | MS.gene01057:CDS |
ATACGGGAAGCCCACTAACC+AGG | 0.546286 | 2.4:-70646121 | MS.gene01057:CDS |
GCGAGCTTTGTCAGGACGAG+TGG | 0.547527 | 2.4:+70646473 | None:intergenic |
TAGGGTTCTCAATTCCTACT+GGG | 0.548434 | 2.4:-70646022 | MS.gene01057:CDS |
AACAGAGGTTTGAGTGGCAA+GGG | 0.550062 | 2.4:-70645850 | MS.gene01057:CDS |
CTTCCTCCCAGCACGCTCCT+CGG | 0.550992 | 2.4:+70646056 | None:intergenic |
CACCTCTACGTACCCTCACT+CGG | 0.553002 | 2.4:+70646175 | None:intergenic |
AAGAATAGATGATACCTGCT+TGG | 0.559188 | 2.4:+70646434 | None:intergenic |
CAATCCTGTCCACAAGCATA+GGG | 0.561253 | 2.4:-70645905 | MS.gene01057:CDS |
ACTTAAGTTGAGTAACTCCC+TGG | 0.562594 | 2.4:+70646103 | None:intergenic |
CTTCCCGTATACAATACCCT+TGG | 0.574843 | 2.4:+70646134 | None:intergenic |
CAATTCCTACTGGGTCAATG+AGG | 0.583661 | 2.4:-70646013 | MS.gene01057:CDS |
AGAAAGAGGCCGGTTTCCAA+GGG | 0.585417 | 2.4:-70646150 | MS.gene01057:CDS |
AAACAGAGGTTTGAGTGGCA+AGG | 0.585660 | 2.4:-70645851 | MS.gene01057:CDS |
TTCTCTTCCAGTTTGCCCTG+CGG | 0.587901 | 2.4:+70645800 | None:intergenic |
CGAGTGAGGGTACGTAGAGG+TGG | 0.590318 | 2.4:-70646174 | MS.gene01057:CDS |
GCTTGGCCTTGTAACCCAAA+CGG | 0.594502 | 2.4:+70646451 | None:intergenic |
TAGAGGTGGGAGAAAGAGGC+CGG | 0.597426 | 2.4:-70646160 | MS.gene01057:CDS |
CACAAGCATAGGGAACTTCG+TGG | 0.602517 | 2.4:-70645895 | MS.gene01057:CDS |
CAAAGCCCGTCCTTCCCGCA+GGG | 0.606273 | 2.4:-70645815 | MS.gene01057:CDS |
GAGTAAGAGATCTGTTGCCG+AGG | 0.608981 | 2.4:-70646073 | MS.gene01057:CDS |
TACGGGAAGCCCACTAACCA+GGG | 0.619308 | 2.4:-70646120 | MS.gene01057:CDS |
GTTATGTTGTGTACCGAGTG+AGG | 0.619671 | 2.4:-70646188 | MS.gene01057:CDS |
AGAATCCTCATTGACCCAGT+AGG | 0.619890 | 2.4:+70646008 | None:intergenic |
CGAGCTTTGTCAGGACGAGT+GGG | 0.623786 | 2.4:+70646474 | None:intergenic |
GGGTCTGGTGAGACGAACAA+TGG | 0.629081 | 2.4:+70646494 | None:intergenic |
GACGGGCTTTGTGGTAACGA+TGG | 0.630329 | 2.4:+70645827 | None:intergenic |
ACGATAACGACGGAGAGACA+AGG | 0.632844 | 2.4:+70645771 | None:intergenic |
TGAGATTCATGCAGCGTGTG+AGG | 0.638236 | 2.4:-70646542 | MS.gene01057:CDS |
AAAGAAAACAGAGGTTTGAG+TGG | 0.638472 | 2.4:-70645856 | MS.gene01057:CDS |
AGTATGTTTCTGAGTTATGG+CGG | 0.642445 | 2.4:-70646584 | MS.gene01057:CDS |
AGTAGGAATTGAGAACCCTA+AGG | 0.644888 | 2.4:+70646025 | None:intergenic |
TTATGTTGTGTACCGAGTGA+GGG | 0.645103 | 2.4:-70646187 | MS.gene01057:CDS |
TTGCCGAGGAGCGTGCTGGG+AGG | 0.662735 | 2.4:-70646059 | MS.gene01057:CDS |
GTTATGGCGGAAGAAGCAAT+CGG | 0.676275 | 2.4:-70646571 | MS.gene01057:CDS |
TCTGCTGGTAAAGAAAACAG+AGG | 0.678817 | 2.4:-70645865 | MS.gene01057:CDS |
GAGTGAGGGTACGTAGAGGT+GGG | 0.682033 | 2.4:-70646173 | MS.gene01057:CDS |
AGTAAAATCAACGATAACGA+CGG | 0.699472 | 2.4:+70645761 | None:intergenic |
TACCGAGTGAGGGTACGTAG+AGG | 0.717794 | 2.4:-70646177 | MS.gene01057:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAGCTTATTATTGATA+AGG | + | chr2.4:70646068-70646087 | None:intergenic | 20.0% |
!! | CATCAATATAAGTTCTATTA+AGG | + | chr2.4:70646203-70646222 | None:intergenic | 20.0% |
!!! | ATTTGAACTTCATTGATTTT+AGG | - | chr2.4:70646248-70646267 | MS.gene01057:intron | 20.0% |
!!! | GTTATTTGTGAATTTTGAAT+AGG | - | chr2.4:70645844-70645863 | MS.gene01057:CDS | 20.0% |
!!! | TTTGAACTTCATTGATTTTA+GGG | - | chr2.4:70646249-70646268 | MS.gene01057:intron | 20.0% |
! | AGAAAGAATTAAAGCATGTT+TGG | + | chr2.4:70646133-70646152 | None:intergenic | 25.0% |
! | TTACTCAACTTAAGTTTCAA+AGG | - | chr2.4:70646364-70646383 | MS.gene01057:intron | 25.0% |
GAATTAAAGCATGTTTGGAT+TGG | + | chr2.4:70646128-70646147 | None:intergenic | 30.0% | |
! | ACAAGTATGTTTCTGAGTTA+TGG | - | chr2.4:70645872-70645891 | MS.gene01057:CDS | 30.0% |
!!! | CTGTTTCTATTCATTTTCTC+TGG | - | chr2.4:70645796-70645815 | MS.gene01057:CDS | 30.0% |
AAAGAAAACAGAGGTTTGAG+TGG | - | chr2.4:70646603-70646622 | MS.gene01057:intron | 35.0% | |
AAGAATAGATGATACCTGCT+TGG | + | chr2.4:70646028-70646047 | None:intergenic | 35.0% | |
AATGACCTCGAAATACTTGA+AGG | + | chr2.4:70646478-70646497 | None:intergenic | 35.0% | |
GAAATGATCCAAGAATCAAC+TGG | - | chr2.4:70646526-70646545 | MS.gene01057:CDS | 35.0% | |
TATACAATACCCTTGGAAAC+CGG | + | chr2.4:70646321-70646340 | None:intergenic | 35.0% | |
TTCTACCTTCAAGTATTTCG+AGG | - | chr2.4:70646470-70646489 | MS.gene01057:CDS | 35.0% | |
! | AGTATGTTTCTGAGTTATGG+CGG | - | chr2.4:70645875-70645894 | MS.gene01057:CDS | 35.0% |
! | CAAGTATTTCGAGGTCATTT+TGG | - | chr2.4:70646479-70646498 | MS.gene01057:CDS | 35.0% |
!! | GTTTCCAAGGGTATTGTATA+CGG | - | chr2.4:70646321-70646340 | MS.gene01057:intron | 35.0% |
!! | TTTCCAAGGGTATTGTATAC+GGG | - | chr2.4:70646322-70646341 | MS.gene01057:intron | 35.0% |
AGTAGGAATTGAGAACCCTA+AGG | + | chr2.4:70646437-70646456 | None:intergenic | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | - | chr2.4:70646437-70646456 | MS.gene01057:intron | 40.0% | |
TCTGCTGGTAAAGAAAACAG+AGG | - | chr2.4:70646594-70646613 | MS.gene01057:CDS | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | - | chr2.4:70646436-70646455 | MS.gene01057:intron | 40.0% | |
TTATGTTGTGTACCGAGTGA+GGG | - | chr2.4:70646272-70646291 | MS.gene01057:intron | 40.0% | |
! | TTGGTAAGCCAGTTGATTCT+TGG | + | chr2.4:70646537-70646556 | None:intergenic | 40.0% |
!! | ACTTAAGTTGAGTAACTCCC+TGG | + | chr2.4:70646359-70646378 | None:intergenic | 40.0% |
AAACAGAGGTTTGAGTGGCA+AGG | - | chr2.4:70646608-70646627 | MS.gene01057:intron | 45.0% | |
AACAGAGGTTTGAGTGGCAA+GGG | - | chr2.4:70646609-70646628 | MS.gene01057:intron | 45.0% | |
AGAATCCTCATTGACCCAGT+AGG | + | chr2.4:70646454-70646473 | None:intergenic | 45.0% | |
CAATCCTGTCCACAAGCATA+GGG | - | chr2.4:70646554-70646573 | MS.gene01057:CDS | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | - | chr2.4:70646446-70646465 | MS.gene01057:intron | 45.0% | |
CTTCCCGTATACAATACCCT+TGG | + | chr2.4:70646328-70646347 | None:intergenic | 45.0% | |
GAAACAGCAGCTGCAATAGA+TGG | + | chr2.4:70645783-70645802 | None:intergenic | 45.0% | |
GTTATGTTGTGTACCGAGTG+AGG | - | chr2.4:70646271-70646290 | MS.gene01057:intron | 45.0% | |
TGAGTAACTCCCTGGTTAGT+GGG | + | chr2.4:70646351-70646370 | None:intergenic | 45.0% | |
TTGAGTAACTCCCTGGTTAG+TGG | + | chr2.4:70646352-70646371 | None:intergenic | 45.0% | |
! | GTTATGGCGGAAGAAGCAAT+CGG | - | chr2.4:70645888-70645907 | MS.gene01057:CDS | 45.0% |
ACGATAACGACGGAGAGACA+AGG | + | chr2.4:70646691-70646710 | None:intergenic | 50.0% | |
AGTTCCCTATGCTTGTGGAC+AGG | + | chr2.4:70646561-70646580 | None:intergenic | 50.0% | |
CACAAGCATAGGGAACTTCG+TGG | - | chr2.4:70646564-70646583 | MS.gene01057:CDS | 50.0% | |
CACGAAGTTCCCTATGCTTG+TGG | + | chr2.4:70646566-70646585 | None:intergenic | 50.0% | |
CCAATCCTGTCCACAAGCAT+AGG | - | chr2.4:70646553-70646572 | MS.gene01057:CDS | 50.0% | |
CCTATGCTTGTGGACAGGAT+TGG | + | chr2.4:70646556-70646575 | None:intergenic | 50.0% | |
GAGTAAGAGATCTGTTGCCG+AGG | - | chr2.4:70646386-70646405 | MS.gene01057:intron | 50.0% | |
TACGTAGAGGTGGGAGAAAG+AGG | - | chr2.4:70646295-70646314 | MS.gene01057:intron | 50.0% | |
TGAGATTCATGCAGCGTGTG+AGG | - | chr2.4:70645917-70645936 | MS.gene01057:CDS | 50.0% | |
TTCTCTTCCAGTTTGCCCTG+CGG | + | chr2.4:70646662-70646681 | None:intergenic | 50.0% | |
! | AGAAAGAGGCCGGTTTCCAA+GGG | - | chr2.4:70646309-70646328 | MS.gene01057:intron | 50.0% |
! | TTTGGGTTACAAGGCCAAGC+AGG | - | chr2.4:70646011-70646030 | MS.gene01057:CDS | 50.0% |
!! | GCTTGGCCTTGTAACCCAAA+CGG | + | chr2.4:70646011-70646030 | None:intergenic | 50.0% |
ATACGGGAAGCCCACTAACC+AGG | - | chr2.4:70646338-70646357 | MS.gene01057:intron | 55.0% | |
CACCTCTACGTACCCTCACT+CGG | + | chr2.4:70646287-70646306 | None:intergenic | 55.0% | |
CCTGACAAAGCTCGCCGTTT+GGG | - | chr2.4:70645994-70646013 | MS.gene01057:CDS | 55.0% | |
CTTCGTGGTCTCACTTCTGC+TGG | - | chr2.4:70646579-70646598 | MS.gene01057:CDS | 55.0% | |
GGGTCTGGTGAGACGAACAA+TGG | + | chr2.4:70645968-70645987 | None:intergenic | 55.0% | |
TACGGGAAGCCCACTAACCA+GGG | - | chr2.4:70646339-70646358 | MS.gene01057:intron | 55.0% | |
TAGAGGTGGGAGAAAGAGGC+CGG | - | chr2.4:70646299-70646318 | MS.gene01057:intron | 55.0% | |
TCATGCAGCGTGTGAGGTGT+TGG | - | chr2.4:70645923-70645942 | MS.gene01057:CDS | 55.0% | |
TCCTGACAAAGCTCGCCGTT+TGG | - | chr2.4:70645993-70646012 | MS.gene01057:CDS | 55.0% | |
TCTCTTCCAGTTTGCCCTGC+GGG | + | chr2.4:70646661-70646680 | None:intergenic | 55.0% | |
TTTGTCAGGACGAGTGGGTC+TGG | + | chr2.4:70645983-70646002 | None:intergenic | 55.0% | |
! | AGCTCGCCGTTTGGGTTACA+AGG | - | chr2.4:70646002-70646021 | MS.gene01057:CDS | 55.0% |
! | CATGCAGCGTGTGAGGTGTT+GGG | - | chr2.4:70645924-70645943 | MS.gene01057:CDS | 55.0% |
! | CGAGCTTTGTCAGGACGAGT+GGG | + | chr2.4:70645988-70646007 | None:intergenic | 55.0% |
! | GACGGGCTTTGTGGTAACGA+TGG | + | chr2.4:70646635-70646654 | None:intergenic | 55.0% |
! | GAGAAAGAGGCCGGTTTCCA+AGG | - | chr2.4:70646308-70646327 | MS.gene01057:intron | 55.0% |
! | GAGGAAGCTTGGTGGCCTTA+GGG | - | chr2.4:70646419-70646438 | MS.gene01057:intron | 55.0% |
! | GAGTGAGGGTACGTAGAGGT+GGG | - | chr2.4:70646286-70646305 | MS.gene01057:intron | 55.0% |
! | TACCGAGTGAGGGTACGTAG+AGG | - | chr2.4:70646282-70646301 | MS.gene01057:intron | 55.0% |
AGTTTGCCCTGCGGGAAGGA+CGG | + | chr2.4:70646653-70646672 | None:intergenic | 60.0% | |
TTCCAGTTTGCCCTGCGGGA+AGG | + | chr2.4:70646657-70646676 | None:intergenic | 60.0% | |
! | CCCAAACGGCGAGCTTTGTC+AGG | + | chr2.4:70645997-70646016 | None:intergenic | 60.0% |
! | CGAGTGAGGGTACGTAGAGG+TGG | - | chr2.4:70646285-70646304 | MS.gene01057:intron | 60.0% |
! | GCGAGCTTTGTCAGGACGAG+TGG | + | chr2.4:70645989-70646008 | None:intergenic | 60.0% |
! | GGAGGAAGCTTGGTGGCCTT+AGG | - | chr2.4:70646418-70646437 | MS.gene01057:intron | 60.0% |
ACAAAGCCCGTCCTTCCCGC+AGG | - | chr2.4:70646643-70646662 | MS.gene01057:intron | 65.0% | |
CAAAGCCCGTCCTTCCCGCA+GGG | - | chr2.4:70646644-70646663 | MS.gene01057:intron | 65.0% | |
CGTGCTGGGAGGAAGCTTGG+TGG | - | chr2.4:70646411-70646430 | MS.gene01057:intron | 65.0% | |
CTTCCTCCCAGCACGCTCCT+CGG | + | chr2.4:70646406-70646425 | None:intergenic | 65.0% | |
GAGCGTGCTGGGAGGAAGCT+TGG | - | chr2.4:70646408-70646427 | MS.gene01057:intron | 65.0% | |
GTCCTTCCCGCAGGGCAAAC+TGG | - | chr2.4:70646652-70646671 | MS.gene01057:intron | 65.0% | |
GTTTGCCCTGCGGGAAGGAC+GGG | + | chr2.4:70646652-70646671 | None:intergenic | 65.0% | |
! | CTGTTGCCGAGGAGCGTGCT+GGG | - | chr2.4:70646397-70646416 | MS.gene01057:intron | 65.0% |
! | TCTGTTGCCGAGGAGCGTGC+TGG | - | chr2.4:70646396-70646415 | MS.gene01057:intron | 65.0% |
! | TGCGGGAAGGACGGGCTTTG+TGG | + | chr2.4:70646644-70646663 | None:intergenic | 65.0% |
! | TTGCCGAGGAGCGTGCTGGG+AGG | - | chr2.4:70646400-70646419 | MS.gene01057:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 70645768 | 70646713 | 70645768 | ID=MS.gene01057 |
chr2.4 | mRNA | 70645768 | 70646713 | 70645768 | ID=MS.gene01057.t1;Parent=MS.gene01057 |
chr2.4 | exon | 70646710 | 70646713 | 70646710 | ID=MS.gene01057.t1.exon1;Parent=MS.gene01057.t1 |
chr2.4 | CDS | 70646710 | 70646713 | 70646710 | ID=cds.MS.gene01057.t1;Parent=MS.gene01057.t1 |
chr2.4 | exon | 70646449 | 70646615 | 70646449 | ID=MS.gene01057.t1.exon2;Parent=MS.gene01057.t1 |
chr2.4 | CDS | 70646449 | 70646615 | 70646449 | ID=cds.MS.gene01057.t1;Parent=MS.gene01057.t1 |
chr2.4 | exon | 70645768 | 70646211 | 70645768 | ID=MS.gene01057.t1.exon3;Parent=MS.gene01057.t1 |
chr2.4 | CDS | 70645768 | 70646211 | 70645768 | ID=cds.MS.gene01057.t1;Parent=MS.gene01057.t1 |
Gene Sequence |
Protein sequence |