Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003507.t1 | XP_013456504.1 | 96.3 | 573 | 17 | 3 | 1 | 571 | 1 | 571 | 0.00E+00 | 1127.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003507.t1 | A0A1P8B8F8 | 36.9 | 567 | 325 | 7 | 3 | 558 | 12 | 556 | 9.8e-106 | 385.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003507.t1 | A0A072UXE0 | 96.3 | 573 | 17 | 3 | 1 | 571 | 1 | 571 | 0.0e+00 | 1127.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99993 | MS.gene003507 | PPI |
| MS.gene063101 | MS.gene003507 | PPI |
| MS.gene75410 | MS.gene003507 | PPI |
| MS.gene054660 | MS.gene003507 | PPI |
| MS.gene003507 | MS.gene68149 | PPI |
| MS.gene62099 | MS.gene003507 | PPI |
| MS.gene044959 | MS.gene003507 | PPI |
| MS.gene003507 | MS.gene75410 | PPI |
| MS.gene003507 | MS.gene53185 | PPI |
| MS.gene062453 | MS.gene003507 | PPI |
| MS.gene014213 | MS.gene003507 | PPI |
| MS.gene52090 | MS.gene003507 | PPI |
| MS.gene74061 | MS.gene003507 | PPI |
| MS.gene057723 | MS.gene003507 | PPI |
| MS.gene003507 | MS.gene59021 | PPI |
| MS.gene003507 | MS.gene032541 | PPI |
| MS.gene90963 | MS.gene003507 | PPI |
| MS.gene003507 | MS.gene68749 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003507.t1 | MTR_4g074070 | 96.335 | 573 | 17 | 3 | 1 | 571 | 1 | 571 | 0.0 | 1140 |
| MS.gene003507.t1 | MTR_7g024420 | 75.699 | 572 | 136 | 2 | 1 | 571 | 1 | 570 | 0.0 | 910 |
| MS.gene003507.t1 | MTR_5g049180 | 71.503 | 572 | 160 | 2 | 1 | 571 | 1 | 570 | 0.0 | 878 |
| MS.gene003507.t1 | MTR_1g106200 | 47.445 | 548 | 281 | 4 | 4 | 546 | 13 | 558 | 0.0 | 535 |
| MS.gene003507.t1 | MTR_1g106910 | 48.000 | 550 | 280 | 5 | 4 | 548 | 10 | 558 | 0.0 | 523 |
| MS.gene003507.t1 | MTR_1g106790 | 46.939 | 539 | 278 | 5 | 9 | 542 | 18 | 553 | 1.27e-174 | 506 |
| MS.gene003507.t1 | MTR_1g106770 | 47.115 | 520 | 271 | 3 | 31 | 546 | 4 | 523 | 2.90e-173 | 502 |
| MS.gene003507.t1 | MTR_1g106200 | 43.248 | 548 | 271 | 5 | 4 | 546 | 19 | 531 | 8.42e-160 | 468 |
| MS.gene003507.t1 | MTR_3g117800 | 41.098 | 528 | 277 | 12 | 24 | 544 | 14 | 514 | 1.04e-132 | 398 |
| MS.gene003507.t1 | MTR_3g117800 | 43.902 | 451 | 243 | 8 | 101 | 544 | 16 | 463 | 2.30e-129 | 387 |
| MS.gene003507.t1 | MTR_3g117800 | 44.731 | 427 | 228 | 6 | 123 | 544 | 10 | 433 | 3.36e-127 | 381 |
| MS.gene003507.t1 | MTR_1g017020 | 30.108 | 558 | 341 | 16 | 37 | 560 | 353 | 895 | 3.84e-63 | 223 |
| MS.gene003507.t1 | MTR_3g103610 | 32.120 | 467 | 275 | 14 | 45 | 480 | 200 | 655 | 1.92e-62 | 219 |
| MS.gene003507.t1 | MTR_4g121520 | 42.574 | 202 | 90 | 1 | 307 | 508 | 223 | 398 | 2.79e-40 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003507.t1 | AT4G33840 | 55.357 | 560 | 243 | 5 | 16 | 570 | 17 | 574 | 0.0 | 655 |
| MS.gene003507.t1 | AT4G33830 | 57.117 | 555 | 229 | 7 | 16 | 565 | 18 | 568 | 0.0 | 648 |
| MS.gene003507.t1 | AT4G33860 | 56.250 | 544 | 231 | 4 | 16 | 554 | 17 | 558 | 0.0 | 645 |
| MS.gene003507.t1 | AT4G38650 | 39.326 | 534 | 285 | 11 | 24 | 544 | 34 | 541 | 1.33e-130 | 393 |
| MS.gene003507.t1 | AT4G33810 | 36.731 | 569 | 327 | 7 | 1 | 558 | 10 | 556 | 1.68e-128 | 388 |
| MS.gene003507.t1 | AT4G33810 | 36.731 | 569 | 327 | 7 | 1 | 558 | 10 | 556 | 1.68e-128 | 388 |
| MS.gene003507.t1 | AT4G33810 | 36.731 | 569 | 327 | 7 | 1 | 558 | 10 | 556 | 1.68e-128 | 388 |
| MS.gene003507.t1 | AT4G33810 | 40.919 | 479 | 274 | 4 | 89 | 558 | 38 | 516 | 3.22e-128 | 386 |
| MS.gene003507.t1 | AT4G33810 | 40.919 | 479 | 274 | 4 | 89 | 558 | 38 | 516 | 3.22e-128 | 386 |
| MS.gene003507.t1 | AT4G33820 | 35.517 | 580 | 339 | 9 | 1 | 567 | 10 | 567 | 3.38e-123 | 374 |
| MS.gene003507.t1 | AT2G14690 | 36.444 | 568 | 314 | 10 | 22 | 571 | 30 | 568 | 2.69e-119 | 364 |
| MS.gene003507.t1 | AT4G38300 | 42.023 | 257 | 137 | 3 | 194 | 450 | 12 | 256 | 2.15e-67 | 220 |
| MS.gene003507.t1 | AT1G58370 | 29.575 | 541 | 328 | 16 | 37 | 539 | 390 | 915 | 3.91e-63 | 224 |
| MS.gene003507.t1 | AT1G58370 | 29.575 | 541 | 328 | 16 | 37 | 539 | 362 | 887 | 4.25e-63 | 223 |
| MS.gene003507.t1 | AT1G10050 | 28.788 | 528 | 335 | 15 | 45 | 539 | 550 | 1069 | 2.66e-58 | 211 |
| MS.gene003507.t1 | AT1G10050 | 28.788 | 528 | 335 | 15 | 45 | 539 | 518 | 1037 | 2.66e-58 | 211 |
| MS.gene003507.t1 | AT1G10050 | 28.788 | 528 | 335 | 15 | 45 | 539 | 518 | 1037 | 2.66e-58 | 211 |
| MS.gene003507.t1 | AT4G08160 | 28.108 | 555 | 334 | 17 | 37 | 543 | 190 | 727 | 7.47e-58 | 206 |
| MS.gene003507.t1 | AT4G08160 | 29.474 | 475 | 290 | 13 | 37 | 473 | 190 | 657 | 3.91e-54 | 195 |
Find 120 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGTCCATCATTTATTTC+TGG | 0.060365 | 4.3:+32966792 | None:intergenic |
| ATAATACTTATGTGGAAATT+TGG | 0.168155 | 4.3:-32966187 | MS.gene003507:CDS |
| GAGAGTGAATAAACCCATTT+TGG | 0.219642 | 4.3:+32965655 | None:intergenic |
| ATCCTAAGTATCAACCAAAA+TGG | 0.221542 | 4.3:-32965669 | MS.gene003507:CDS |
| CACTCTCACCCAGGGGTTAA+AGG | 0.241754 | 4.3:-32964743 | MS.gene003507:CDS |
| CTGCTTCTCGTTTGCCAATA+TGG | 0.254889 | 4.3:-32965255 | MS.gene003507:CDS |
| GTTATACTCATTAATAAATA+AGG | 0.255913 | 4.3:+32965447 | None:intergenic |
| GTAGTCCATCATTTATTTCT+GGG | 0.282535 | 4.3:+32966793 | None:intergenic |
| CTGCTAAGTTAAGCTGGTTT+GGG | 0.286004 | 4.3:+32965632 | None:intergenic |
| GGGATGTATTATACTTTATC+TGG | 0.299029 | 4.3:-32966645 | MS.gene003507:intron |
| AGATACAAGGGCCAAGTTAT+TGG | 0.302678 | 4.3:-32965580 | MS.gene003507:CDS |
| CTCCATTTCTCATTCTTTGA+AGG | 0.334895 | 4.3:-32965535 | MS.gene003507:CDS |
| TAATTGTTGGTCTATGCTTA+AGG | 0.340081 | 4.3:-32966402 | MS.gene003507:CDS |
| AGGCAATTGCCGCTTGGAAT+TGG | 0.344122 | 4.3:-32965346 | MS.gene003507:CDS |
| TACAGGGATGGACATCATTT+GGG | 0.347819 | 4.3:-32966773 | MS.gene003507:CDS |
| ACTGCTAAGTTAAGCTGGTT+TGG | 0.351329 | 4.3:+32965631 | None:intergenic |
| AAGTATAATACATCCCCTTT+TGG | 0.366965 | 4.3:+32966652 | None:intergenic |
| ATGAACCTGGTTAAATGCTT+TGG | 0.368490 | 4.3:+32965489 | None:intergenic |
| TCTAATTCTGTAATCCATAT+TGG | 0.372646 | 4.3:+32965241 | None:intergenic |
| ACCAAGATTGGTTCTCATCT+AGG | 0.377645 | 4.3:-32965840 | MS.gene003507:CDS |
| AATAAACCAAAGTTTCCATT+TGG | 0.380065 | 4.3:-32965901 | MS.gene003507:CDS |
| AATTGTTGGTCTATGCTTAA+GGG | 0.388951 | 4.3:-32966401 | MS.gene003507:CDS |
| GCAAGTTGAGAGGGAGGGAA+GGG | 0.410237 | 4.3:+32965308 | None:intergenic |
| TCATTCTTTGAAGGTAAACT+TGG | 0.410337 | 4.3:-32965526 | MS.gene003507:CDS |
| CTACAGGGATGGACATCATT+TGG | 0.410813 | 4.3:-32966774 | MS.gene003507:CDS |
| GCACTTCCAAATGGAAACTT+TGG | 0.412889 | 4.3:+32965895 | None:intergenic |
| GTCCTTGTTCGTCTAGTGCT+TGG | 0.413467 | 4.3:+32965959 | None:intergenic |
| TGTTGCAAGCCAATCTAATC+AGG | 0.413602 | 4.3:-32965218 | MS.gene003507:intron |
| TTGACATTACCTGATTAGAT+TGG | 0.416962 | 4.3:+32965209 | None:intergenic |
| TACCTTCAAAGAATGAGAAA+TGG | 0.422772 | 4.3:+32965533 | None:intergenic |
| GGCAAGTTGAGAGGGAGGGA+AGG | 0.424561 | 4.3:+32965307 | None:intergenic |
| AACAAATTCAAAGTGTGAAT+AGG | 0.428320 | 4.3:-32965366 | MS.gene003507:CDS |
| ACAACCGTGCGTACCAAGAT+TGG | 0.432597 | 4.3:-32965852 | MS.gene003507:CDS |
| ATATACTCGCATTTGGTAAA+GGG | 0.432945 | 4.3:+32965935 | None:intergenic |
| AGAAATAAATGATGGACTAC+AGG | 0.433056 | 4.3:-32966790 | MS.gene003507:CDS |
| CTATTTATTGCACTTCCAAA+TGG | 0.433671 | 4.3:+32965886 | None:intergenic |
| GTAATATATATACTCGCATT+TGG | 0.435045 | 4.3:+32965928 | None:intergenic |
| TTTGGACTGCTAAGTTAAGC+TGG | 0.440724 | 4.3:+32965626 | None:intergenic |
| TTCCATTGTTGTTCTGTGAA+TGG | 0.442187 | 4.3:+32966143 | None:intergenic |
| TATATACTCGCATTTGGTAA+AGG | 0.445171 | 4.3:+32965934 | None:intergenic |
| GCGATTGTTAAAACAAATGA+AGG | 0.447006 | 4.3:-32966458 | MS.gene003507:CDS |
| CAACATCCCAACCAATAACT+TGG | 0.449449 | 4.3:+32965569 | None:intergenic |
| TTGTTCTGTGAATGGTTGTA+AGG | 0.456277 | 4.3:+32966151 | None:intergenic |
| CATTTGAAAATGAAATGAAA+TGG | 0.462838 | 4.3:-32965804 | MS.gene003507:CDS |
| ATACAACATAGAGAATCATT+AGG | 0.469427 | 4.3:-32966741 | MS.gene003507:CDS |
| TCCTAAGTATCAACCAAAAT+GGG | 0.472270 | 4.3:-32965668 | MS.gene003507:CDS |
| CAAAAGATTCACCTCCAAAA+GGG | 0.472620 | 4.3:-32966666 | MS.gene003507:CDS |
| CAAGGGCCAAGTTATTGGTT+GGG | 0.475373 | 4.3:-32965575 | MS.gene003507:CDS |
| TTCTGTTGTGGGAAGATACA+AGG | 0.475645 | 4.3:-32965593 | MS.gene003507:CDS |
| CCAAAAGATTCACCTCCAAA+AGG | 0.479483 | 4.3:-32966667 | MS.gene003507:CDS |
| CCATTGTACTGAGGCTTCTG+TGG | 0.482877 | 4.3:+32966831 | None:intergenic |
| AGAAGCAGTAAGGGTATCAA+TGG | 0.488249 | 4.3:+32965270 | None:intergenic |
| ATTGCCGCTTGGAATTGGCT+TGG | 0.488568 | 4.3:-32965341 | MS.gene003507:CDS |
| TCAAGATCAAAGCATTGAAA+AGG | 0.491272 | 4.3:-32966114 | MS.gene003507:intron |
| ACAACTCAAGGAGTCCATCT+TGG | 0.491918 | 4.3:+32964576 | None:intergenic |
| GGAAGCTGAGCTCTACTTTG+AGG | 0.494676 | 4.3:-32966354 | MS.gene003507:intron |
| ATAGAGTAATTCTTCTTGCT+AGG | 0.494726 | 4.3:+32964515 | None:intergenic |
| ATTACAATACCTTTAACCCC+TGG | 0.498991 | 4.3:+32964734 | None:intergenic |
| ACAAGGGCCAAGTTATTGGT+TGG | 0.504170 | 4.3:-32965576 | MS.gene003507:CDS |
| TCACACAATATTACTGTTCG+AGG | 0.504212 | 4.3:-32965712 | MS.gene003507:CDS |
| ACTGCAGCATTTGATCAGCT+TGG | 0.504894 | 4.3:+32965743 | None:intergenic |
| ACCTAGATGAGAACCAATCT+TGG | 0.505709 | 4.3:+32965839 | None:intergenic |
| CATTGTACTGAGGCTTCTGT+GGG | 0.507610 | 4.3:+32966832 | None:intergenic |
| TCAATGGAAGCTCTCATGTA+AGG | 0.515536 | 4.3:+32965286 | None:intergenic |
| GGTTTCATAGCAGATACATC+AGG | 0.520938 | 4.3:-32966377 | MS.gene003507:CDS |
| AAAAGAATGAATTCTGTTGT+GGG | 0.523267 | 4.3:-32965604 | MS.gene003507:CDS |
| TTGGCAAACGAGAAGCAGTA+AGG | 0.525147 | 4.3:+32965260 | None:intergenic |
| TTACAATACCTTTAACCCCT+GGG | 0.527114 | 4.3:+32964735 | None:intergenic |
| TAGAGTAATTCTTCTTGCTA+GGG | 0.532300 | 4.3:+32964516 | None:intergenic |
| CAAAACCCAGAAATAAATGA+TGG | 0.533809 | 4.3:-32966798 | MS.gene003507:CDS |
| TTAATAAATAAGGTGGCTTG+TGG | 0.537468 | 4.3:+32965457 | None:intergenic |
| GTGGACAGCATGGACACCGC+AGG | 0.544659 | 4.3:-32964711 | MS.gene003507:CDS |
| TAATGAGTATAACACAATTG+AGG | 0.545937 | 4.3:-32965437 | MS.gene003507:CDS |
| GTAGAGTAATAATACTTATG+TGG | 0.553769 | 4.3:-32966195 | MS.gene003507:intron |
| TGACAAACTAATATCTGAGT+GGG | 0.553941 | 4.3:-32964627 | MS.gene003507:CDS |
| GTGAATAGGCAATTGCCGCT+TGG | 0.559881 | 4.3:-32965352 | MS.gene003507:CDS |
| TGTTGGTCTATGCTTAAGGG+TGG | 0.565512 | 4.3:-32966398 | MS.gene003507:CDS |
| ATCATTAGGTAACAAATATG+TGG | 0.568281 | 4.3:-32966727 | MS.gene003507:CDS |
| ATGTATGTCATCATACTCGC+AGG | 0.570894 | 4.3:-32968406 | MS.gene003507:intron |
| GTGGATCAATATTATGAACC+TGG | 0.571439 | 4.3:+32965476 | None:intergenic |
| AGAGAGGCACACTCTCACCC+AGG | 0.571476 | 4.3:-32964752 | MS.gene003507:CDS |
| CTCATGTAAGGCAAGTTGAG+AGG | 0.574507 | 4.3:+32965298 | None:intergenic |
| ACAATTGAGGATAGTAGAGA+TGG | 0.575559 | 4.3:-32965424 | MS.gene003507:CDS |
| ATACTCATTAATAAATAAGG+TGG | 0.578304 | 4.3:+32965450 | None:intergenic |
| TTCAGCCAAAGCATTTAACC+AGG | 0.582794 | 4.3:-32965494 | MS.gene003507:CDS |
| CATGCAGGAACGGAAGAGAA+AGG | 0.585673 | 4.3:-32965989 | MS.gene003507:intron |
| TCATGTAAGGCAAGTTGAGA+GGG | 0.593623 | 4.3:+32965299 | None:intergenic |
| CCACAGAAGCCTCAGTACAA+TGG | 0.596512 | 4.3:-32966831 | MS.gene003507:CDS |
| GCTTGGTTACAAGTGAGTAA+TGG | 0.599139 | 4.3:-32966497 | MS.gene003507:CDS |
| AACCATTCACAGAACAACAA+TGG | 0.601388 | 4.3:-32966145 | MS.gene003507:CDS |
| TGGCAAACGAGAAGCAGTAA+GGG | 0.602105 | 4.3:+32965261 | None:intergenic |
| GTATTGTAATGTGGACAGCA+TGG | 0.607804 | 4.3:-32964721 | MS.gene003507:CDS |
| TAAATGATGGACTACAGGGA+TGG | 0.614495 | 4.3:-32966785 | MS.gene003507:CDS |
| GTTTCATAGCAGATACATCA+GGG | 0.616391 | 4.3:-32966376 | MS.gene003507:CDS |
| AAAAGATTCACCTCCAAAAG+GGG | 0.619313 | 4.3:-32966665 | MS.gene003507:CDS |
| GAAATAAATGATGGACTACA+GGG | 0.623693 | 4.3:-32966789 | MS.gene003507:CDS |
| GACAAACTAATATCTGAGTG+GGG | 0.623791 | 4.3:-32964626 | MS.gene003507:CDS |
| GAGAGGCACACTCTCACCCA+GGG | 0.625535 | 4.3:-32964751 | MS.gene003507:CDS |
| GGGTTAAAGGTATTGTAATG+TGG | 0.628241 | 4.3:-32964730 | MS.gene003507:CDS |
| TGTAAGGCAAGTTGAGAGGG+AGG | 0.629805 | 4.3:+32965302 | None:intergenic |
| ATTATTCCTCCATTGTACTG+AGG | 0.630818 | 4.3:+32966822 | None:intergenic |
| TACACAAATGAATACGCACC+AGG | 0.632244 | 4.3:-32965781 | MS.gene003507:CDS |
| TTGTCAACAACATCCCCTGT+TGG | 0.633617 | 4.3:+32964644 | None:intergenic |
| TGCTAAGTTAAGCTGGTTTG+GGG | 0.635037 | 4.3:+32965633 | None:intergenic |
| AGAACCAATCTTGGTACGCA+CGG | 0.635919 | 4.3:+32965848 | None:intergenic |
| GTATGATGACATACATCAGA+AGG | 0.636716 | 4.3:+32968413 | None:intergenic |
| TTAGGGACGACAGACCAAGA+TGG | 0.643605 | 4.3:-32964590 | MS.gene003507:CDS |
| ACAAACTAATATCTGAGTGG+GGG | 0.644964 | 4.3:-32964625 | MS.gene003507:CDS |
| TGGACAGCATGGACACCGCA+GGG | 0.648221 | 4.3:-32964710 | MS.gene003507:CDS |
| GTAAGGCAAGTTGAGAGGGA+GGG | 0.653299 | 4.3:+32965303 | None:intergenic |
| CAGAAGCCTCAGTACAATGG+AGG | 0.654580 | 4.3:-32966828 | MS.gene003507:CDS |
| TTGACAAACTAATATCTGAG+TGG | 0.663292 | 4.3:-32964628 | MS.gene003507:CDS |
| GACTCCAAGCCAATTCCAAG+CGG | 0.675630 | 4.3:+32965337 | None:intergenic |
| TCTGTTGTGGGAAGATACAA+GGG | 0.678876 | 4.3:-32965592 | MS.gene003507:CDS |
| GTCCAAGCACTAGACGAACA+AGG | 0.680698 | 4.3:-32965961 | MS.gene003507:CDS |
| ACAGGGATGGACATCATTTG+GGG | 0.680750 | 4.3:-32966772 | MS.gene003507:CDS |
| CTTCGAGCAAGCTCTTAGAG+AGG | 0.684078 | 4.3:-32964768 | MS.gene003507:CDS |
| TTTCATAGCAGATACATCAG+GGG | 0.754520 | 4.3:-32966375 | MS.gene003507:CDS |
| AGAGGCACACTCTCACCCAG+GGG | 0.761814 | 4.3:-32964750 | MS.gene003507:CDS |
| CACATCTTATAGCAACCCTG+CGG | 0.776758 | 4.3:+32964695 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAGAAAAACAAATAT+TGG | + | chr4.3:32967691-32967710 | None:intergenic | 10.0% |
| !! | ATATATTAGATAACTATAAA+TGG | - | chr4.3:32964631-32964650 | MS.gene003507:CDS | 10.0% |
| !! | ATGTTAATTAAAATTAAACT+TGG | + | chr4.3:32966858-32966877 | None:intergenic | 10.0% |
| !! | TAAAATAGAAAAAATAATAC+TGG | + | chr4.3:32968010-32968029 | None:intergenic | 10.0% |
| !! | TAAAATTAACAATTGAAAAT+GGG | + | chr4.3:32965137-32965156 | None:intergenic | 10.0% |
| !! | TATTATTTGAATGATAAATA+AGG | - | chr4.3:32966575-32966594 | MS.gene003507:intron | 10.0% |
| !! | TATTTAAAAAAATAAAAGTC+GGG | - | chr4.3:32965427-32965446 | MS.gene003507:CDS | 10.0% |
| !! | TTAAAATTAACAATTGAAAA+TGG | + | chr4.3:32965138-32965157 | None:intergenic | 10.0% |
| !!! | AAGTTTAATTTTAATTAACA+TGG | - | chr4.3:32966857-32966876 | MS.gene003507:intron | 10.0% |
| !!! | ATCTTTAAAAATATCATTTT+TGG | - | chr4.3:32965529-32965548 | MS.gene003507:CDS | 10.0% |
| !!! | ATTTATTTTATTCAATTATG+TGG | + | chr4.3:32965194-32965213 | None:intergenic | 10.0% |
| !!! | TAATTTGAAATTTCAAATTA+TGG | + | chr4.3:32965518-32965499 | None:intergenic | 10.0% |
| !!! | TCTTAATATATTTTTTTGTT+TGG | + | chr4.3:32965653-32965672 | None:intergenic | 10.0% |
| !!! | TTGATAACTATAAAATTTAA+AGG | - | chr4.3:32966820-32966839 | MS.gene003507:CDS | 10.0% |
| !!! | TTTATTTTATTCAATTATGT+GGG | + | chr4.3:32965193-32965212 | None:intergenic | 10.0% |
| !! | AGTAACAAAAAAAATTGATT+TGG | - | chr4.3:32964829-32964848 | MS.gene003507:intron | 15.0% |
| !! | GTTATACTCATTAATAAATA+AGG | + | chr4.3:32967425-32967444 | None:intergenic | 15.0% |
| !! | TTTACAGATGTATTAAAATT+TGG | + | chr4.3:32966642-32966661 | None:intergenic | 15.0% |
| !! | AAAACAAGTAATAAGTTAGA+GGG | + | chr4.3:32965997-32966016 | None:intergenic | 20.0% |
| !! | AATCAAAAGCAAAATAATGT+TGG | + | chr4.3:32964774-32964793 | None:intergenic | 20.0% |
| !! | AATTTCAAAAATTTACCAAC+AGG | - | chr4.3:32968210-32968229 | MS.gene003507:intron | 20.0% |
| !! | ATAATACTTATGTGGAAATT+TGG | - | chr4.3:32966682-32966701 | MS.gene003507:CDS | 20.0% |
| !! | ATACTCATTAATAAATAAGG+TGG | + | chr4.3:32967422-32967441 | None:intergenic | 20.0% |
| !! | ATTTCAAAAATTTACCAACA+GGG | - | chr4.3:32968211-32968230 | MS.gene003507:intron | 20.0% |
| !! | ATTTCAAATTATGGAAAATG+TGG | + | chr4.3:32965490-32965509 | None:intergenic | 20.0% |
| !! | CATTGTTTGAATGATAAATT+TGG | - | chr4.3:32965334-32965353 | MS.gene003507:CDS | 20.0% |
| !! | CATTTGAAAATGAAATGAAA+TGG | - | chr4.3:32967065-32967084 | MS.gene003507:intron | 20.0% |
| !! | TTGAAAATGGGATAATTAAA+AGG | + | chr4.3:32965125-32965144 | None:intergenic | 20.0% |
| !!! | AACAAAAAAAATTGATTTGG+AGG | - | chr4.3:32964832-32964851 | MS.gene003507:intron | 20.0% |
| !!! | AACATTTATTTCTGTTTTTG+AGG | - | chr4.3:32965926-32965945 | MS.gene003507:CDS | 20.0% |
| !!! | AATAATATGCACTGATTTAT+AGG | - | chr4.3:32966312-32966331 | MS.gene003507:intron | 20.0% |
| !!! | AATGAAGGATTTAAATTTTG+TGG | - | chr4.3:32966426-32966445 | MS.gene003507:CDS | 20.0% |
| !!! | AATTAGTGATCGATTAATTT+TGG | - | chr4.3:32964584-32964603 | MS.gene003507:CDS | 20.0% |
| !!! | AGTTTTTTTAGCTATGTTAT+TGG | + | chr4.3:32964942-32964961 | None:intergenic | 20.0% |
| !!! | ATTCTTTGATACTGTTTTAA+GGG | + | chr4.3:32965799-32965818 | None:intergenic | 20.0% |
| !!! | TATCAATTGTGTTGTTTTAT+TGG | + | chr4.3:32968412-32968431 | None:intergenic | 20.0% |
| !!! | TATTCTTTGATACTGTTTTA+AGG | + | chr4.3:32965800-32965819 | None:intergenic | 20.0% |
| !!! | TATTTTACTCATTTATGACT+TGG | - | chr4.3:32968023-32968042 | MS.gene003507:intron | 20.0% |
| !!! | TTGGATAAACTTTAAAATGA+AGG | - | chr4.3:32965353-32965372 | MS.gene003507:CDS | 20.0% |
| !!! | TTTGAATTTGTTTGATTTTC+TGG | + | chr4.3:32967495-32967514 | None:intergenic | 20.0% |
| ! | AAAAAGAATGAATTCTGTTG+TGG | - | chr4.3:32967264-32967283 | MS.gene003507:intron | 25.0% |
| ! | AAAAGAATGAATTCTGTTGT+GGG | - | chr4.3:32967265-32967284 | MS.gene003507:intron | 25.0% |
| ! | AACAAATTCAAAGTGTGAAT+AGG | - | chr4.3:32967503-32967522 | MS.gene003507:intron | 25.0% |
| ! | AATAAACCAAAGTTTCCATT+TGG | - | chr4.3:32966968-32966987 | MS.gene003507:intron | 25.0% |
| ! | AATACATTTCTCTTATAGTG+TGG | - | chr4.3:32965246-32965265 | MS.gene003507:CDS | 25.0% |
| ! | AGAAAATACATAAAGAGTGA+TGG | + | chr4.3:32965015-32965034 | None:intergenic | 25.0% |
| ! | AGGTAAACAACTAATTTCAT+AGG | - | chr4.3:32966775-32966794 | MS.gene003507:CDS | 25.0% |
| ! | AGTTATCAATTGTCTGAATA+TGG | + | chr4.3:32966809-32966828 | None:intergenic | 25.0% |
| ! | ATACAACATAGAGAATCATT+AGG | - | chr4.3:32966128-32966147 | MS.gene003507:CDS | 25.0% |
| ! | ATACGGTTTATTACATTACA+TGG | - | chr4.3:32965962-32965981 | MS.gene003507:CDS | 25.0% |
| ! | ATCATTAGGTAACAAATATG+TGG | - | chr4.3:32966142-32966161 | MS.gene003507:CDS | 25.0% |
| ! | GAAAACAAGTAATAAGTTAG+AGG | + | chr4.3:32965998-32966017 | None:intergenic | 25.0% |
| ! | GTAATATATATACTCGCATT+TGG | + | chr4.3:32966944-32966963 | None:intergenic | 25.0% |
| ! | GTAGAGTAATAATACTTATG+TGG | - | chr4.3:32966674-32966693 | MS.gene003507:CDS | 25.0% |
| ! | TAAAAAAATAAAAGTCGGGA+GGG | - | chr4.3:32965431-32965450 | MS.gene003507:CDS | 25.0% |
| ! | TAATACTGGATTGTCTAATA+TGG | + | chr4.3:32967996-32968015 | None:intergenic | 25.0% |
| ! | TAATGAGTATAACACAATTG+AGG | - | chr4.3:32967432-32967451 | MS.gene003507:intron | 25.0% |
| ! | TCTAATTCTGTAATCCATAT+TGG | + | chr4.3:32967631-32967650 | None:intergenic | 25.0% |
| ! | TTAAAAAAATAAAAGTCGGG+AGG | - | chr4.3:32965430-32965449 | MS.gene003507:CDS | 25.0% |
| ! | TTTCAAAAATTTACCAACAG+GGG | - | chr4.3:32968212-32968231 | MS.gene003507:intron | 25.0% |
| ! | TTTGTAATCTCCATGAAAAA+GGG | + | chr4.3:32968319-32968338 | None:intergenic | 25.0% |
| !! | TTTTGTAATCTCCATGAAAA+AGG | + | chr4.3:32968320-32968339 | None:intergenic | 25.0% |
| !!! | AGATGAAGAAAAAAAGTGTT+AGG | + | chr4.3:32965742-32965761 | None:intergenic | 25.0% |
| !!! | ATTTTGCTTTTGATTGAAAG+TGG | - | chr4.3:32964779-32964798 | MS.gene003507:CDS | 25.0% |
| !!! | CAACAGAATTCATTCTTTTT+TGG | + | chr4.3:32967264-32967283 | None:intergenic | 25.0% |
| !!! | GTTTTATTGGAATCTTCTTT+TGG | + | chr4.3:32968399-32968418 | None:intergenic | 25.0% |
| AAGTGTTAGGATGAGATAAT+CGG | + | chr4.3:32965729-32965748 | None:intergenic | 30.0% | |
| AATTATGTGGGACTGAATTA+AGG | + | chr4.3:32965181-32965200 | None:intergenic | 30.0% | |
| ATAGAGTAATTCTTCTTGCT+AGG | + | chr4.3:32968357-32968376 | None:intergenic | 30.0% | |
| ATATACTCGCATTTGGTAAA+GGG | + | chr4.3:32966937-32966956 | None:intergenic | 30.0% | |
| ATCCTAAGTATCAACCAAAA+TGG | - | chr4.3:32967200-32967219 | MS.gene003507:intron | 30.0% | |
| CAAAACCCAGAAATAAATGA+TGG | - | chr4.3:32966071-32966090 | MS.gene003507:intron | 30.0% | |
| CATTGTGAGATTTACTTTGT+GGG | + | chr4.3:32964745-32964764 | None:intergenic | 30.0% | |
| CTATTTATTGCACTTCCAAA+TGG | + | chr4.3:32966986-32967005 | None:intergenic | 30.0% | |
| GCGATTGTTAAAACAAATGA+AGG | - | chr4.3:32966411-32966430 | MS.gene003507:CDS | 30.0% | |
| GGGATGTATTATACTTTATC+TGG | - | chr4.3:32966224-32966243 | MS.gene003507:intron | 30.0% | |
| TACCTTCAAAGAATGAGAAA+TGG | + | chr4.3:32967339-32967358 | None:intergenic | 30.0% | |
| TAGAGTAATTCTTCTTGCTA+GGG | + | chr4.3:32968356-32968375 | None:intergenic | 30.0% | |
| TATATACTCGCATTTGGTAA+AGG | + | chr4.3:32966938-32966957 | None:intergenic | 30.0% | |
| TCATTGTGAGATTTACTTTG+TGG | + | chr4.3:32964746-32964765 | None:intergenic | 30.0% | |
| TCCTAAGTATCAACCAAAAT+GGG | - | chr4.3:32967201-32967220 | MS.gene003507:intron | 30.0% | |
| TGACAAACTAATATCTGAGT+GGG | - | chr4.3:32968242-32968261 | MS.gene003507:intron | 30.0% | |
| TGTAGTCCATCATTTATTTC+TGG | + | chr4.3:32966080-32966099 | None:intergenic | 30.0% | |
| TTAATAAATAAGGTGGCTTG+TGG | + | chr4.3:32967415-32967434 | None:intergenic | 30.0% | |
| TTGACAAACTAATATCTGAG+TGG | - | chr4.3:32968241-32968260 | MS.gene003507:intron | 30.0% | |
| TTGACATTACCTGATTAGAT+TGG | + | chr4.3:32967663-32967682 | None:intergenic | 30.0% | |
| TTTACATTCGTGATTTGAGT+AGG | - | chr4.3:32968071-32968090 | MS.gene003507:intron | 30.0% | |
| TTTCTCTTATAGTGTGGTAA+TGG | - | chr4.3:32965252-32965271 | MS.gene003507:CDS | 30.0% | |
| ! | AAGTATAATACATCCCCTTT+TGG | + | chr4.3:32966220-32966239 | None:intergenic | 30.0% |
| ! | AATTGTTGGTCTATGCTTAA+GGG | - | chr4.3:32966468-32966487 | MS.gene003507:CDS | 30.0% |
| ! | ATTTTCTGGATGTAACTTGA+TGG | + | chr4.3:32967481-32967500 | None:intergenic | 30.0% |
| ! | GTAGTCCATCATTTATTTCT+GGG | + | chr4.3:32966079-32966098 | None:intergenic | 30.0% |
| ! | TAATTGTTGGTCTATGCTTA+AGG | - | chr4.3:32966467-32966486 | MS.gene003507:CDS | 30.0% |
| ! | TCATTCTTTGAAGGTAAACT+TGG | - | chr4.3:32967343-32967362 | MS.gene003507:intron | 30.0% |
| ! | TGGAAATAGTTATCTTTTCC+TGG | + | chr4.3:32967109-32967128 | None:intergenic | 30.0% |
| ! | TTTTTGCTGAGTCTAATTGT+TGG | - | chr4.3:32966454-32966473 | MS.gene003507:CDS | 30.0% |
| !! | AGAAATAAATGATGGACTAC+AGG | - | chr4.3:32966079-32966098 | MS.gene003507:intron | 30.0% |
| !! | CACTGATTTATAGGTAGTTA+TGG | - | chr4.3:32966321-32966340 | MS.gene003507:intron | 30.0% |
| !! | GAAATAAATGATGGACTACA+GGG | - | chr4.3:32966080-32966099 | MS.gene003507:intron | 30.0% |
| !! | TACTTTGAGGTACTTAAGTA+TGG | - | chr4.3:32966528-32966547 | MS.gene003507:intron | 30.0% |
| !! | TCAAGATCAAAGCATTGAAA+AGG | - | chr4.3:32966755-32966774 | MS.gene003507:CDS | 30.0% |
| !! | TTTTAATTAACATGGCATGC+AGG | - | chr4.3:32966865-32966884 | MS.gene003507:intron | 30.0% |
| !!! | TGTGGTAATGGTACAATTTT+TGG | - | chr4.3:32965264-32965283 | MS.gene003507:CDS | 30.0% |
| AAAAGATTCACCTCCAAAAG+GGG | - | chr4.3:32966204-32966223 | MS.gene003507:intron | 35.0% | |
| AACCATTCACAGAACAACAA+TGG | - | chr4.3:32966724-32966743 | MS.gene003507:CDS | 35.0% | |
| ACAAACTAATATCTGAGTGG+GGG | - | chr4.3:32968244-32968263 | MS.gene003507:intron | 35.0% | |
| ACAATTGAGGATAGTAGAGA+TGG | - | chr4.3:32967445-32967464 | MS.gene003507:intron | 35.0% | |
| ACATAAAGACATGCAACTAC+AGG | - | chr4.3:32965836-32965855 | MS.gene003507:CDS | 35.0% | |
| ATCTTTAACTAGTGTCCAAG+AGG | - | chr4.3:32965758-32965777 | MS.gene003507:CDS | 35.0% | |
| ATGAACCTGGTTAAATGCTT+TGG | + | chr4.3:32967383-32967402 | None:intergenic | 35.0% | |
| ATTACAATACCTTTAACCCC+TGG | + | chr4.3:32968138-32968157 | None:intergenic | 35.0% | |
| ATTATTCCTCCATTGTACTG+AGG | + | chr4.3:32966050-32966069 | None:intergenic | 35.0% | |
| CAAAAGATTCACCTCCAAAA+GGG | - | chr4.3:32966203-32966222 | MS.gene003507:intron | 35.0% | |
| CTCCATTTCTCATTCTTTGA+AGG | - | chr4.3:32967334-32967353 | MS.gene003507:intron | 35.0% | |
| GACAAACTAATATCTGAGTG+GGG | - | chr4.3:32968243-32968262 | MS.gene003507:intron | 35.0% | |
| GTATGATGACATACATCAGA+AGG | + | chr4.3:32964459-32964478 | None:intergenic | 35.0% | |
| GTGGATCAATATTATGAACC+TGG | + | chr4.3:32967396-32967415 | None:intergenic | 35.0% | |
| GTTACTCATAAAGTGTGAAC+AGG | + | chr4.3:32964815-32964834 | None:intergenic | 35.0% | |
| GTTTCATAGCAGATACATCA+GGG | - | chr4.3:32966493-32966512 | MS.gene003507:CDS | 35.0% | |
| TATTCTGACTACTTGAGTGT+GGG | + | chr4.3:32967816-32967835 | None:intergenic | 35.0% | |
| TCACACAATATTACTGTTCG+AGG | - | chr4.3:32967157-32967176 | MS.gene003507:intron | 35.0% | |
| TTACAATACCTTTAACCCCT+GGG | + | chr4.3:32968137-32968156 | None:intergenic | 35.0% | |
| TTATTCTGACTACTTGAGTG+TGG | + | chr4.3:32967817-32967836 | None:intergenic | 35.0% | |
| TTGTTCTGTGAATGGTTGTA+AGG | + | chr4.3:32966721-32966740 | None:intergenic | 35.0% | |
| TTTCATAGCAGATACATCAG+GGG | - | chr4.3:32966494-32966513 | MS.gene003507:CDS | 35.0% | |
| ! | GAGAGTGAATAAACCCATTT+TGG | + | chr4.3:32967217-32967236 | None:intergenic | 35.0% |
| ! | TATAATACATCCCCTTTTGG+AGG | + | chr4.3:32966217-32966236 | None:intergenic | 35.0% |
| ! | TTCCATTGTTGTTCTGTGAA+TGG | + | chr4.3:32966729-32966748 | None:intergenic | 35.0% |
| !! | CTTTTGGAGGTGAATCTTTT+GGG | + | chr4.3:32966204-32966223 | None:intergenic | 35.0% |
| !! | GGGTTAAAGGTATTGTAATG+TGG | - | chr4.3:32968139-32968158 | MS.gene003507:intron | 35.0% |
| !! | GTTTTAACAATCGCTGTTAC+AGG | + | chr4.3:32966405-32966424 | None:intergenic | 35.0% |
| !! | TTGATTTGGAGGTAAAATCC+TGG | - | chr4.3:32964843-32964862 | MS.gene003507:intron | 35.0% |
| !! | TTTTGGGAGACACTATCATA+TGG | + | chr4.3:32966188-32966207 | None:intergenic | 35.0% |
| !!! | ACCCATTTTGGTTGATACTT+AGG | + | chr4.3:32967205-32967224 | None:intergenic | 35.0% |
| AAGAGTCGTCCTATCTTACT+TGG | + | chr4.3:32967931-32967950 | None:intergenic | 40.0% | |
| ACCTAGATGAGAACCAATCT+TGG | + | chr4.3:32967033-32967052 | None:intergenic | 40.0% | |
| ACTGCTAAGTTAAGCTGGTT+TGG | + | chr4.3:32967241-32967260 | None:intergenic | 40.0% | |
| AGATACAAGGGCCAAGTTAT+TGG | - | chr4.3:32967289-32967308 | MS.gene003507:intron | 40.0% | |
| ATGTATGTCATCATACTCGC+AGG | - | chr4.3:32964463-32964482 | MS.gene003507:CDS | 40.0% | |
| ATTAACATGGCATGCAGGAA+CGG | - | chr4.3:32966870-32966889 | MS.gene003507:intron | 40.0% | |
| CAACATCCCAACCAATAACT+TGG | + | chr4.3:32967303-32967322 | None:intergenic | 40.0% | |
| CATGAAAAAGGGACAACTCA+AGG | + | chr4.3:32968308-32968327 | None:intergenic | 40.0% | |
| CCAAAAGATTCACCTCCAAA+AGG | - | chr4.3:32966202-32966221 | MS.gene003507:intron | 40.0% | |
| CTAGCTGATTGCAAGGAATT+CGG | - | chr4.3:32967968-32967987 | MS.gene003507:intron | 40.0% | |
| GAGGATTTGAGAGTCACATA+CGG | - | chr4.3:32965945-32965964 | MS.gene003507:CDS | 40.0% | |
| GCACTTCCAAATGGAAACTT+TGG | + | chr4.3:32966977-32966996 | None:intergenic | 40.0% | |
| GCTTGGTTACAAGTGAGTAA+TGG | - | chr4.3:32966372-32966391 | MS.gene003507:CDS | 40.0% | |
| GGTTTCATAGCAGATACATC+AGG | - | chr4.3:32966492-32966511 | MS.gene003507:CDS | 40.0% | |
| GTATTGTAATGTGGACAGCA+TGG | - | chr4.3:32968148-32968167 | MS.gene003507:intron | 40.0% | |
| TAATGCTAACTAGTGCCTCT+TGG | + | chr4.3:32965776-32965795 | None:intergenic | 40.0% | |
| TACACAAATGAATACGCACC+AGG | - | chr4.3:32967088-32967107 | MS.gene003507:intron | 40.0% | |
| TACAGGGATGGACATCATTT+GGG | - | chr4.3:32966096-32966115 | MS.gene003507:intron | 40.0% | |
| TAGCTGATTGCAAGGAATTC+GGG | - | chr4.3:32967969-32967988 | MS.gene003507:intron | 40.0% | |
| TATGACCGTCCAAGTAAGAT+AGG | - | chr4.3:32967919-32967938 | MS.gene003507:intron | 40.0% | |
| TCAATGGAAGCTCTCATGTA+AGG | + | chr4.3:32967586-32967605 | None:intergenic | 40.0% | |
| TCTGTTGTGGGAAGATACAA+GGG | - | chr4.3:32967277-32967296 | MS.gene003507:intron | 40.0% | |
| TGGAGGTAAAATCCTGGTAA+AGG | - | chr4.3:32964849-32964868 | MS.gene003507:intron | 40.0% | |
| TGTTGCAAGCCAATCTAATC+AGG | - | chr4.3:32967651-32967670 | MS.gene003507:intron | 40.0% | |
| TTCTGTTGTGGGAAGATACA+AGG | - | chr4.3:32967276-32967295 | MS.gene003507:intron | 40.0% | |
| TTTGGACTGCTAAGTTAAGC+TGG | + | chr4.3:32967246-32967265 | None:intergenic | 40.0% | |
| ! | ACCAAGATTGGTTCTCATCT+AGG | - | chr4.3:32967029-32967048 | MS.gene003507:intron | 40.0% |
| ! | CTGCTAAGTTAAGCTGGTTT+GGG | + | chr4.3:32967240-32967259 | None:intergenic | 40.0% |
| ! | TCATGTAAGGCAAGTTGAGA+GGG | + | chr4.3:32967573-32967592 | None:intergenic | 40.0% |
| ! | TTCAGCCAAAGCATTTAACC+AGG | - | chr4.3:32967375-32967394 | MS.gene003507:intron | 40.0% |
| !! | AGAAGCAGTAAGGGTATCAA+TGG | + | chr4.3:32967602-32967621 | None:intergenic | 40.0% |
| !! | CCTTTTGGAGGTGAATCTTT+TGG | + | chr4.3:32966205-32966224 | None:intergenic | 40.0% |
| !! | CTTGAGTTGTCCCTTTTTCA+TGG | - | chr4.3:32968306-32968325 | MS.gene003507:intron | 40.0% |
| !! | TAAATGATGGACTACAGGGA+TGG | - | chr4.3:32966084-32966103 | MS.gene003507:intron | 40.0% |
| !! | TGCTAAGTTAAGCTGGTTTG+GGG | + | chr4.3:32967239-32967258 | None:intergenic | 40.0% |
| ACAACTCAAGGAGTCCATCT+TGG | + | chr4.3:32968296-32968315 | None:intergenic | 45.0% | |
| ACAAGGGCCAAGTTATTGGT+TGG | - | chr4.3:32967293-32967312 | MS.gene003507:intron | 45.0% | |
| ACAGGGATGGACATCATTTG+GGG | - | chr4.3:32966097-32966116 | MS.gene003507:intron | 45.0% | |
| ACTGCAGCATTTGATCAGCT+TGG | + | chr4.3:32967129-32967148 | None:intergenic | 45.0% | |
| AGAACCAATCTTGGTACGCA+CGG | + | chr4.3:32967024-32967043 | None:intergenic | 45.0% | |
| CACATCTTATAGCAACCCTG+CGG | + | chr4.3:32968177-32968196 | None:intergenic | 45.0% | |
| CATTGTACTGAGGCTTCTGT+GGG | + | chr4.3:32966040-32966059 | None:intergenic | 45.0% | |
| CTACAGGGATGGACATCATT+TGG | - | chr4.3:32966095-32966114 | MS.gene003507:intron | 45.0% | |
| CTCGCTCACAACAAGATTTC+AGG | + | chr4.3:32967791-32967810 | None:intergenic | 45.0% | |
| CTGCTTCTCGTTTGCCAATA+TGG | - | chr4.3:32967614-32967633 | MS.gene003507:intron | 45.0% | |
| CTTGGTTGACTACCTTTACC+AGG | + | chr4.3:32964864-32964883 | None:intergenic | 45.0% | |
| GTAATCTCTGCTCGAGAACT+TGG | + | chr4.3:32964882-32964901 | None:intergenic | 45.0% | |
| GTCGTCCTATCTTACTTGGA+CGG | + | chr4.3:32967927-32967946 | None:intergenic | 45.0% | |
| TGGCAAACGAGAAGCAGTAA+GGG | + | chr4.3:32967611-32967630 | None:intergenic | 45.0% | |
| TGTGGGATTGTCAAACACTG+AGG | + | chr4.3:32966023-32966042 | None:intergenic | 45.0% | |
| TTGGCAAACGAGAAGCAGTA+AGG | + | chr4.3:32967612-32967631 | None:intergenic | 45.0% | |
| TTGTCAACAACATCCCCTGT+TGG | + | chr4.3:32968228-32968247 | None:intergenic | 45.0% | |
| ! | CAAGGGCCAAGTTATTGGTT+GGG | - | chr4.3:32967294-32967313 | MS.gene003507:intron | 45.0% |
| ! | CCTAGAGCGTTTGATCTTGA+CGG | - | chr4.3:32967837-32967856 | MS.gene003507:intron | 45.0% |
| ! | CGCTTTTGAATTGTGCAGCT+TGG | - | chr4.3:32966355-32966374 | MS.gene003507:CDS | 45.0% |
| ! | CTCATGTAAGGCAAGTTGAG+AGG | + | chr4.3:32967574-32967593 | None:intergenic | 45.0% |
| ! | GGGGGAAAGCAGAAGTTTTA+GGG | - | chr4.3:32968262-32968281 | MS.gene003507:intron | 45.0% |
| ! | TGGGGGAAAGCAGAAGTTTT+AGG | - | chr4.3:32968261-32968280 | MS.gene003507:intron | 45.0% |
| ! | TGTTGGTCTATGCTTAAGGG+TGG | - | chr4.3:32966471-32966490 | MS.gene003507:CDS | 45.0% |
| !! | ATATTTAAAAAAATAAAAGT+CGG | - | chr4.3:32965426-32965445 | MS.gene003507:CDS | 5.0% |
| !!! | AATTGAATAAAATAAATTTT+AGG | - | chr4.3:32965197-32965216 | MS.gene003507:intron | 5.0% |
| !!! | TTATAAATTTTTAAAGTTTT+GGG | + | chr4.3:32965586-32965605 | None:intergenic | 5.0% |
| !!! | TTTATAAATTTTTAAAGTTT+TGG | + | chr4.3:32965587-32965606 | None:intergenic | 5.0% |
| ACAACCGTGCGTACCAAGAT+TGG | - | chr4.3:32967017-32967036 | MS.gene003507:intron | 50.0% | |
| ATCAGCTAGAACTCGCAGTC+AGG | + | chr4.3:32967957-32967976 | None:intergenic | 50.0% | |
| CAGAAGCCTCAGTACAATGG+AGG | - | chr4.3:32966041-32966060 | MS.gene003507:intron | 50.0% | |
| CATGCAGGAACGGAAGAGAA+AGG | - | chr4.3:32966880-32966899 | MS.gene003507:intron | 50.0% | |
| CCACAGAAGCCTCAGTACAA+TGG | - | chr4.3:32966038-32966057 | MS.gene003507:intron | 50.0% | |
| CCATTGTACTGAGGCTTCTG+TGG | + | chr4.3:32966041-32966060 | None:intergenic | 50.0% | |
| CCGTCAAGATCAAACGCTCT+AGG | + | chr4.3:32967840-32967859 | None:intergenic | 50.0% | |
| CTTCGAGCAAGCTCTTAGAG+AGG | - | chr4.3:32968101-32968120 | MS.gene003507:intron | 50.0% | |
| GACTCCAAGCCAATTCCAAG+CGG | + | chr4.3:32967535-32967554 | None:intergenic | 50.0% | |
| GGAAGCTGAGCTCTACTTTG+AGG | - | chr4.3:32966515-32966534 | MS.gene003507:intron | 50.0% | |
| GTCCAAGCACTAGACGAACA+AGG | - | chr4.3:32966908-32966927 | MS.gene003507:intron | 50.0% | |
| GTCCTTGTTCGTCTAGTGCT+TGG | + | chr4.3:32966913-32966932 | None:intergenic | 50.0% | |
| GTGAATAGGCAATTGCCGCT+TGG | - | chr4.3:32967517-32967536 | MS.gene003507:intron | 50.0% | |
| TTAGGGACGACAGACCAAGA+TGG | - | chr4.3:32968279-32968298 | MS.gene003507:intron | 50.0% | |
| ! | AGGCAATTGCCGCTTGGAAT+TGG | - | chr4.3:32967523-32967542 | MS.gene003507:intron | 50.0% |
| ! | ATTGCCGCTTGGAATTGGCT+TGG | - | chr4.3:32967528-32967547 | MS.gene003507:intron | 50.0% |
| ! | GCGAGTTCTAGCTGATTGCA+AGG | - | chr4.3:32967961-32967980 | MS.gene003507:intron | 50.0% |
| ! | GTAAGGCAAGTTGAGAGGGA+GGG | + | chr4.3:32967569-32967588 | None:intergenic | 50.0% |
| ! | TGTAAGGCAAGTTGAGAGGG+AGG | + | chr4.3:32967570-32967589 | None:intergenic | 50.0% |
| CACTCTCACCCAGGGGTTAA+AGG | - | chr4.3:32968126-32968145 | MS.gene003507:intron | 55.0% | |
| ! | GCAAGTTGAGAGGGAGGGAA+GGG | + | chr4.3:32967564-32967583 | None:intergenic | 55.0% |
| TGGACAGCATGGACACCGCA+GGG | - | chr4.3:32968159-32968178 | MS.gene003507:intron | 60.0% | |
| ! | AGAGAGGCACACTCTCACCC+AGG | - | chr4.3:32968117-32968136 | MS.gene003507:intron | 60.0% |
| ! | AGAGGCACACTCTCACCCAG+GGG | - | chr4.3:32968119-32968138 | MS.gene003507:intron | 60.0% |
| ! | GAGAGGCACACTCTCACCCA+GGG | - | chr4.3:32968118-32968137 | MS.gene003507:intron | 60.0% |
| ! | GGCAAGTTGAGAGGGAGGGA+AGG | + | chr4.3:32967565-32967584 | None:intergenic | 60.0% |
| GTGGACAGCATGGACACCGC+AGG | - | chr4.3:32968158-32968177 | MS.gene003507:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 32964445 | 32968446 | 32964445 | ID=MS.gene003507 |
| chr4.3 | mRNA | 32964445 | 32968446 | 32964445 | ID=MS.gene003507.t1;Parent=MS.gene003507 |
| chr4.3 | exon | 32968407 | 32968446 | 32968407 | ID=MS.gene003507.t1.exon1;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32968407 | 32968446 | 32968407 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32966981 | 32967033 | 32966981 | ID=MS.gene003507.t1.exon2;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32966981 | 32967033 | 32966981 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32966646 | 32966865 | 32966646 | ID=MS.gene003507.t1.exon3;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32966646 | 32966865 | 32966646 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32966355 | 32966518 | 32966355 | ID=MS.gene003507.t1.exon4;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32966355 | 32966518 | 32966355 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32966115 | 32966213 | 32966115 | ID=MS.gene003507.t1.exon5;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32966115 | 32966213 | 32966115 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32965219 | 32966004 | 32965219 | ID=MS.gene003507.t1.exon6;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32965219 | 32966004 | 32965219 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| chr4.3 | exon | 32964445 | 32964798 | 32964445 | ID=MS.gene003507.t1.exon7;Parent=MS.gene003507.t1 |
| chr4.3 | CDS | 32964445 | 32964798 | 32964445 | ID=cds.MS.gene003507.t1;Parent=MS.gene003507.t1 |
| Gene Sequence |
| Protein sequence |
