Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74061.t1 | XP_003621871.1 | 94.9 | 570 | 29 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1126.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74061.t1 | A0A1P8B8F8 | 37.9 | 562 | 318 | 6 | 3 | 553 | 12 | 553 | 4.4e-114 | 413.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74061.t1 | G7KWV0 | 94.9 | 570 | 29 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1126.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74061 | MS.gene75410 | PPI |
| MS.gene74061 | MS.gene53185 | PPI |
| MS.gene74061 | MS.gene90963 | PPI |
| MS.gene99993 | MS.gene74061 | PPI |
| MS.gene054660 | MS.gene74061 | PPI |
| MS.gene74061 | MS.gene057723 | PPI |
| MS.gene74061 | MS.gene68149 | PPI |
| MS.gene74061 | MS.gene68749 | PPI |
| MS.gene74061 | MS.gene52090 | PPI |
| MS.gene044959 | MS.gene74061 | PPI |
| MS.gene74061 | MS.gene59021 | PPI |
| MS.gene74061 | MS.gene063101 | PPI |
| MS.gene74061 | MS.gene003507 | PPI |
| MS.gene74061 | MS.gene032541 | PPI |
| MS.gene74061 | MS.gene62099 | PPI |
| MS.gene74061 | MS.gene044959 | PPI |
| MS.gene062453 | MS.gene74061 | PPI |
| MS.gene014213 | MS.gene74061 | PPI |
| MS.gene52090 | MS.gene74061 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74061.t1 | MTR_7g024420 | 94.912 | 570 | 29 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1119 |
| MS.gene74061.t1 | MTR_5g049180 | 80.877 | 570 | 109 | 0 | 1 | 570 | 1 | 570 | 0.0 | 991 |
| MS.gene74061.t1 | MTR_4g074070 | 74.606 | 571 | 144 | 1 | 1 | 570 | 1 | 571 | 0.0 | 925 |
| MS.gene74061.t1 | MTR_1g106200 | 48.893 | 542 | 272 | 3 | 9 | 545 | 18 | 559 | 0.0 | 560 |
| MS.gene74061.t1 | MTR_1g106790 | 48.141 | 538 | 275 | 3 | 8 | 541 | 17 | 554 | 0.0 | 548 |
| MS.gene74061.t1 | MTR_1g106910 | 47.247 | 563 | 287 | 5 | 4 | 559 | 10 | 569 | 0.0 | 543 |
| MS.gene74061.t1 | MTR_1g106770 | 48.177 | 521 | 266 | 3 | 29 | 545 | 4 | 524 | 0.0 | 527 |
| MS.gene74061.t1 | MTR_1g106200 | 44.834 | 542 | 261 | 4 | 9 | 545 | 24 | 532 | 7.36e-170 | 493 |
| MS.gene74061.t1 | MTR_3g117800 | 38.574 | 547 | 298 | 10 | 9 | 546 | 1 | 518 | 1.21e-132 | 397 |
| MS.gene74061.t1 | MTR_3g117800 | 41.978 | 455 | 254 | 6 | 99 | 546 | 16 | 467 | 1.54e-127 | 382 |
| MS.gene74061.t1 | MTR_3g117800 | 42.925 | 424 | 234 | 4 | 128 | 546 | 17 | 437 | 5.96e-124 | 372 |
| MS.gene74061.t1 | MTR_1g017020 | 30.515 | 544 | 330 | 15 | 35 | 543 | 353 | 883 | 1.51e-66 | 233 |
| MS.gene74061.t1 | MTR_3g103610 | 30.654 | 535 | 311 | 15 | 43 | 537 | 200 | 714 | 1.43e-64 | 225 |
| MS.gene74061.t1 | MTR_4g121520 | 43.842 | 203 | 88 | 1 | 305 | 507 | 223 | 399 | 4.95e-48 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74061.t1 | AT4G33840 | 56.912 | 557 | 225 | 6 | 16 | 564 | 19 | 568 | 0.0 | 671 |
| MS.gene74061.t1 | AT4G33860 | 56.881 | 545 | 227 | 5 | 16 | 555 | 19 | 560 | 0.0 | 662 |
| MS.gene74061.t1 | AT4G33830 | 56.835 | 556 | 231 | 6 | 7 | 557 | 11 | 562 | 0.0 | 662 |
| MS.gene74061.t1 | AT4G33810 | 37.766 | 564 | 320 | 6 | 1 | 553 | 10 | 553 | 1.43e-139 | 416 |
| MS.gene74061.t1 | AT4G33810 | 37.766 | 564 | 320 | 6 | 1 | 553 | 10 | 553 | 1.43e-139 | 416 |
| MS.gene74061.t1 | AT4G33810 | 37.766 | 564 | 320 | 6 | 1 | 553 | 10 | 553 | 1.43e-139 | 416 |
| MS.gene74061.t1 | AT4G33810 | 41.387 | 476 | 270 | 4 | 87 | 553 | 38 | 513 | 1.58e-136 | 407 |
| MS.gene74061.t1 | AT4G33810 | 41.387 | 476 | 270 | 4 | 87 | 553 | 38 | 513 | 1.58e-136 | 407 |
| MS.gene74061.t1 | AT4G38650 | 39.405 | 538 | 287 | 9 | 22 | 546 | 34 | 545 | 9.51e-134 | 401 |
| MS.gene74061.t1 | AT4G33820 | 37.726 | 554 | 307 | 7 | 5 | 540 | 8 | 541 | 9.59e-134 | 402 |
| MS.gene74061.t1 | AT2G14690 | 36.697 | 545 | 300 | 8 | 18 | 544 | 28 | 545 | 1.38e-122 | 373 |
| MS.gene74061.t1 | AT4G38300 | 44.358 | 257 | 131 | 2 | 192 | 448 | 12 | 256 | 3.87e-74 | 238 |
| MS.gene74061.t1 | AT1G58370 | 29.596 | 544 | 324 | 15 | 35 | 537 | 362 | 887 | 4.02e-66 | 232 |
| MS.gene74061.t1 | AT1G58370 | 29.596 | 544 | 324 | 15 | 35 | 537 | 390 | 915 | 4.92e-66 | 232 |
| MS.gene74061.t1 | AT1G10050 | 29.490 | 529 | 330 | 17 | 43 | 537 | 518 | 1037 | 2.68e-60 | 216 |
| MS.gene74061.t1 | AT1G10050 | 29.490 | 529 | 330 | 17 | 43 | 537 | 518 | 1037 | 2.68e-60 | 216 |
| MS.gene74061.t1 | AT1G10050 | 29.490 | 529 | 330 | 17 | 43 | 537 | 550 | 1069 | 3.63e-60 | 216 |
| MS.gene74061.t1 | AT4G08160 | 28.467 | 548 | 339 | 18 | 35 | 540 | 190 | 726 | 2.57e-58 | 208 |
| MS.gene74061.t1 | AT4G08160 | 29.289 | 478 | 287 | 16 | 35 | 471 | 190 | 657 | 5.55e-54 | 194 |
Find 130 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTCTTCGAAAGTAAAT+TGG | 0.117129 | 7.4:+76909248 | MS.gene74061:CDS |
| ATAATACTTCTGCGGAAATT+TGG | 0.146645 | 7.4:+76908607 | MS.gene74061:CDS |
| TTAGAGGCCACAATATATTT+TGG | 0.154693 | 7.4:+76909079 | MS.gene74061:CDS |
| TTTGAATCTCTTTGATCTTC+TGG | 0.181295 | 7.4:-76909398 | None:intergenic |
| ATCCTCAATACCAACCTTAT+TGG | 0.189375 | 7.4:+76909106 | MS.gene74061:CDS |
| ACAACCAAAGGATTTAAATT+TGG | 0.200208 | 7.4:+76908389 | MS.gene74061:CDS |
| TTTCGTAGTCGCCGTGAAAA+AGG | 0.211235 | 7.4:-76909891 | None:intergenic |
| CTATGTGTCATCCTACTTTC+AGG | 0.218103 | 7.4:+76906505 | MS.gene74061:CDS |
| GGCAAGTTAGGAGGACTATT+AGG | 0.280499 | 7.4:-76909468 | None:intergenic |
| GGTCACCGCAAGGTTGTTAT+AGG | 0.291268 | 7.4:+76909743 | MS.gene74061:CDS |
| AGCCAATTGCCTCTTGGAAT+TGG | 0.304415 | 7.4:+76909429 | MS.gene74061:CDS |
| CCTGAACAATAATGCATATC+AGG | 0.315794 | 7.4:+76908918 | MS.gene74061:CDS |
| AGGCCTCAAAGTATCCATTT+TGG | 0.316564 | 7.4:-76909867 | None:intergenic |
| CCTGATATGCATTATTGTTC+AGG | 0.318329 | 7.4:-76908918 | None:intergenic |
| AAATTATTATTCTTCTTGAT+AGG | 0.320746 | 7.4:-76909928 | None:intergenic |
| GAGCCACTGGTATGCCAATA+TGG | 0.320894 | 7.4:+76909520 | MS.gene74061:CDS |
| ACCACCAAATTTAAATCCTT+TGG | 0.322474 | 7.4:-76908393 | None:intergenic |
| TCCTCAATACCAACCTTATT+GGG | 0.330100 | 7.4:+76909107 | MS.gene74061:CDS |
| TAATTGTTGGTCCATGCTTA+AGG | 0.335231 | 7.4:+76908433 | MS.gene74061:CDS |
| TACAAGGATGGACAACATTT+GGG | 0.335968 | 7.4:+76907741 | MS.gene74061:CDS |
| TAATACTTCTGCGGAAATTT+GGG | 0.337149 | 7.4:+76908608 | MS.gene74061:CDS |
| TAATTTCACTCATCATATAA+AGG | 0.356203 | 7.4:+76909945 | MS.gene74061:CDS |
| CGTCGCAAGCCAACCTAATC+AGG | 0.365336 | 7.4:+76909557 | MS.gene74061:CDS |
| CTACAAGGATGGACAACATT+TGG | 0.365394 | 7.4:+76907740 | MS.gene74061:CDS |
| TCTAATTCTGTGATCCATAT+TGG | 0.366863 | 7.4:-76909534 | None:intergenic |
| GCTCTCATGTAAGGCAAGTT+AGG | 0.374261 | 7.4:-76909480 | None:intergenic |
| AGATACAAGGGTCAGCTTAT+TGG | 0.375943 | 7.4:+76909195 | MS.gene74061:CDS |
| AGAATTGCATTATTCTTTCT+CGG | 0.377564 | 7.4:+76907868 | MS.gene74061:CDS |
| GCAAGTTAGGAGGACTATTA+GGG | 0.379213 | 7.4:-76909467 | None:intergenic |
| AATTGTTGGTCCATGCTTAA+GGG | 0.382621 | 7.4:+76908434 | MS.gene74061:CDS |
| CCACAAAAGCCTCAGTATAA+TGG | 0.382731 | 7.4:+76907683 | MS.gene74061:CDS |
| GTAAGAGATATACTTGCATT+TGG | 0.383405 | 7.4:-76908847 | None:intergenic |
| TCAGGGATGACAGACCAAAA+TGG | 0.396995 | 7.4:+76909853 | MS.gene74061:CDS |
| ATATACTTGCATTTGGTAAA+GGG | 0.408985 | 7.4:-76908840 | None:intergenic |
| TTAAGCATGGACCAACAATT+AGG | 0.409585 | 7.4:-76908431 | None:intergenic |
| CATTCTCACCCTGGGATTCA+AGG | 0.416224 | 7.4:+76909700 | MS.gene74061:CDS |
| TCATTCTTCGAAAGTAAATT+GGG | 0.419021 | 7.4:+76909249 | MS.gene74061:CDS |
| TTTCGAAGAATGAGAAATGT+AGG | 0.419626 | 7.4:-76909239 | None:intergenic |
| ACCAAAGGATTTAAATTTGG+TGG | 0.427149 | 7.4:+76908392 | MS.gene74061:CDS |
| ATCAGGATTGGTTCGCATCT+AGG | 0.431094 | 7.4:+76908935 | MS.gene74061:CDS |
| GATATACTTGCATTTGGTAA+AGG | 0.436075 | 7.4:-76908841 | None:intergenic |
| GACAGTGAAGAAACCCAATA+AGG | 0.439540 | 7.4:-76909120 | None:intergenic |
| CGATCAGTTGATCAATGAAT+GGG | 0.439697 | 7.4:+76909816 | MS.gene74061:CDS |
| GAATTGCATTATTCTTTCTC+GGG | 0.441704 | 7.4:+76907869 | MS.gene74061:CDS |
| CAAGGGTCAGCTTATTGGTT+GGG | 0.443725 | 7.4:+76909200 | MS.gene74061:CDS |
| ATCATTAGGCAACAAATTTG+TGG | 0.445827 | 7.4:+76907787 | MS.gene74061:CDS |
| ATTATAATGCCTTGAATCCC+AGG | 0.448750 | 7.4:-76909709 | None:intergenic |
| AAACAAGGTATTGCTATTAG+AGG | 0.453226 | 7.4:+76909063 | MS.gene74061:CDS |
| TTTCGACTGCATCGTTAAGC+TGG | 0.459220 | 7.4:-76909149 | None:intergenic |
| ATTGAACATAGAGAATCATT+AGG | 0.472919 | 7.4:+76907773 | MS.gene74061:CDS |
| ACCCAATAAGGTTGGTATTG+AGG | 0.474337 | 7.4:-76909108 | None:intergenic |
| ATCTTCTGGATATAACTTGG+CGG | 0.475969 | 7.4:-76909384 | None:intergenic |
| CATGTGGTTGATTTCTACCA+TGG | 0.476899 | 7.4:-76907814 | None:intergenic |
| TTGGGTTTCTTCACTGTCAC+CGG | 0.477213 | 7.4:+76909125 | MS.gene74061:CDS |
| TAGAAAGCTTACTTCAACGT+TGG | 0.478795 | 7.4:-76907573 | None:intergenic |
| CAGTGGCTCGAAGGGTATCA+AGG | 0.479030 | 7.4:-76909506 | None:intergenic |
| AATTATTATTCTTCTTGATA+GGG | 0.480741 | 7.4:-76909927 | None:intergenic |
| GTGAATAGCCAATTGCCTCT+TGG | 0.483750 | 7.4:+76909423 | MS.gene74061:CDS |
| CTTGATACCCTTCGAGCCAC+TGG | 0.485343 | 7.4:+76909507 | MS.gene74061:CDS |
| AATGAGGTTCACAACATTGA+CGG | 0.485943 | 7.4:+76909297 | MS.gene74061:CDS |
| TCGATCAGTTGATCAATGAA+TGG | 0.489187 | 7.4:+76909815 | MS.gene74061:CDS |
| TCTTCTGGATATAACTTGGC+GGG | 0.490488 | 7.4:-76909383 | None:intergenic |
| GTCCAATTCCAAGAGGCAAT+TGG | 0.492692 | 7.4:-76909431 | None:intergenic |
| TTCAGCTAGGATGTTTAATG+AGG | 0.494998 | 7.4:+76909281 | MS.gene74061:CDS |
| TCAAGGGAAGCTCTCATGTA+AGG | 0.502828 | 7.4:-76909489 | None:intergenic |
| TCAACAACAAAGTATTGAAA+AGG | 0.503870 | 7.4:+76908680 | MS.gene74061:CDS |
| ATCTCTTACAATGAAGAGGC+CGG | 0.504359 | 7.4:+76908861 | MS.gene74061:CDS |
| TTGATCTTCTGGATATAACT+TGG | 0.504419 | 7.4:-76909387 | None:intergenic |
| TTCCATTGTGTCAAGATACA+AGG | 0.510850 | 7.4:+76909182 | MS.gene74061:CDS |
| ACAATAATGCATATCAGGAT+TGG | 0.518619 | 7.4:+76908923 | MS.gene74061:CDS |
| GTAGGCATTGTACTTCGAGC+AGG | 0.518834 | 7.4:+76909663 | MS.gene74061:intron |
| TTTGACGCTGATGCAATGCT+AGG | 0.520772 | 7.4:+76909030 | MS.gene74061:CDS |
| ATGTGGTTGATTTCTACCAT+GGG | 0.524713 | 7.4:-76907813 | None:intergenic |
| TTGTTGATAGCACTTCCAAA+TGG | 0.528695 | 7.4:-76908889 | None:intergenic |
| GTGGTTACTAACCTGAAAGT+AGG | 0.528846 | 7.4:-76906516 | None:intergenic |
| TCTCTTACAATGAAGAGGCC+GGG | 0.532395 | 7.4:+76908862 | MS.gene74061:CDS |
| AACGTTGGCACTATAATCAT+AGG | 0.533743 | 7.4:-76907558 | None:intergenic |
| GAGAGGCACATTCTCACCCT+GGG | 0.534920 | 7.4:+76909692 | MS.gene74061:CDS |
| ACTGCATCGTTAAGCTGGTC+CGG | 0.540100 | 7.4:-76909144 | None:intergenic |
| AATTTCAAGAACTTGCCTGC+AGG | 0.540391 | 7.4:+76909784 | MS.gene74061:CDS |
| ACAAGGGTCAGCTTATTGGT+TGG | 0.540589 | 7.4:+76909199 | MS.gene74061:CDS |
| GGTCTTATAGCAGATACAAC+AGG | 0.541628 | 7.4:+76908458 | MS.gene74061:CDS |
| ACCATTGAGGATAGTAGAGA+TGG | 0.546920 | 7.4:+76909351 | MS.gene74061:CDS |
| TTGGCATACCAGTGGCTCGA+AGG | 0.552421 | 7.4:-76909515 | None:intergenic |
| TTGACGCTGATGCAATGCTA+GGG | 0.560587 | 7.4:+76909031 | MS.gene74061:CDS |
| ACCATCTCTACTATCCTCAA+TGG | 0.563345 | 7.4:-76909352 | None:intergenic |
| AACAAATTTGTGGTAGCCCA+TGG | 0.573356 | 7.4:+76907797 | MS.gene74061:CDS |
| GAACTGAATGATGGACTACA+AGG | 0.574266 | 7.4:+76907725 | MS.gene74061:CDS |
| TGGCATACCAGTGGCTCGAA+GGG | 0.577741 | 7.4:-76909514 | None:intergenic |
| GTATATCTCTTACAATGAAG+AGG | 0.580146 | 7.4:+76908857 | MS.gene74061:CDS |
| TAACTTGGCAGGACCGCAAG+AGG | 0.582823 | 7.4:+76908782 | MS.gene74061:intron |
| GTGAAGAAACCCAATAAGGT+TGG | 0.583381 | 7.4:-76909116 | None:intergenic |
| AGACCAAAATGGATACTTTG+AGG | 0.584675 | 7.4:+76909864 | MS.gene74061:CDS |
| CTCATGTAAGGCAAGTTAGG+AGG | 0.585719 | 7.4:-76909477 | None:intergenic |
| GAACTACTACTTTCCTCTTG+CGG | 0.588961 | 7.4:-76908795 | None:intergenic |
| CATTTGAAAATGAAATGAAG+TGG | 0.592024 | 7.4:+76908971 | MS.gene74061:CDS |
| TGAATGATGGACTACAAGGA+TGG | 0.593461 | 7.4:+76907729 | MS.gene74061:CDS |
| CTAGGGTTTGCAGAGAAACA+AGG | 0.596108 | 7.4:+76909048 | MS.gene74061:CDS |
| TGATCGACAATATCACCTGC+AGG | 0.596189 | 7.4:-76909799 | None:intergenic |
| GATCATCCCAAAATATATTG+TGG | 0.597363 | 7.4:-76909086 | None:intergenic |
| GTAGAGCAATAATACTTCTG+CGG | 0.599674 | 7.4:+76908599 | MS.gene74061:intron |
| GCACTTCCAAATGGAAAACC+CGG | 0.599845 | 7.4:-76908880 | None:intergenic |
| AGAGAGGCACATTCTCACCC+TGG | 0.599965 | 7.4:+76909691 | MS.gene74061:CDS |
| TGTTGGTCCATGCTTAAGGG+TGG | 0.602822 | 7.4:+76908437 | MS.gene74061:CDS |
| CTTCGAGCAGGTTCTTAGAG+AGG | 0.610309 | 7.4:+76909675 | MS.gene74061:CDS |
| CTTCTGGATATAACTTGGCG+GGG | 0.615259 | 7.4:-76909382 | None:intergenic |
| ATGATTCCTCCATTATACTG+AGG | 0.615693 | 7.4:-76907692 | None:intergenic |
| GCAGTAGTCAAAACAACCAA+AGG | 0.615768 | 7.4:+76908377 | MS.gene74061:CDS |
| GTAGGATGACACATAGCAGA+AGG | 0.615796 | 7.4:-76906498 | None:intergenic |
| ACCCTTGTATCTTGACACAA+TGG | 0.616316 | 7.4:-76909184 | None:intergenic |
| AACCATTCACAGAAAAGCAA+TGG | 0.617386 | 7.4:+76908649 | MS.gene74061:CDS |
| GAATGAATATAATACCATTG+AGG | 0.618665 | 7.4:+76909338 | MS.gene74061:CDS |
| CAAAAGCCTCAGTATAATGG+AGG | 0.621253 | 7.4:+76907686 | MS.gene74061:CDS |
| AGTGGCTCGAAGGGTATCAA+GGG | 0.623716 | 7.4:-76909505 | None:intergenic |
| GGATTCAAGGCATTATAATG+TGG | 0.623749 | 7.4:+76909713 | MS.gene74061:CDS |
| TGGACAGCGTGGTCACCGCA+AGG | 0.637568 | 7.4:+76909733 | MS.gene74061:CDS |
| TCCATTGTGTCAAGATACAA+GGG | 0.642157 | 7.4:+76909183 | MS.gene74061:CDS |
| AGCTTGGATACAAGTGAGTG+AGG | 0.658683 | 7.4:+76908337 | MS.gene74061:intron |
| TTATAATGCCTTGAATCCCA+GGG | 0.658986 | 7.4:-76909708 | None:intergenic |
| GCATTATAATGTGGACAGCG+TGG | 0.659654 | 7.4:+76909722 | MS.gene74061:CDS |
| GATCAGTTGATCAATGAATG+GGG | 0.660135 | 7.4:+76909817 | MS.gene74061:CDS |
| ACAAGGATGGACAACATTTG+GGG | 0.661237 | 7.4:+76907742 | MS.gene74061:CDS |
| ATCAGTTGATCAATGAATGG+GGG | 0.663857 | 7.4:+76909818 | MS.gene74061:CDS |
| TATAAGACCACCCTTAAGCA+TGG | 0.666965 | 7.4:-76908444 | None:intergenic |
| TACACGAATGAATATGCGCA+AGG | 0.670467 | 7.4:+76908994 | MS.gene74061:CDS |
| GTTCAAGCAGTTAACGAACA+AGG | 0.671205 | 7.4:+76908814 | MS.gene74061:CDS |
| GACTCAAGTCCAATTCCAAG+AGG | 0.679929 | 7.4:-76909438 | None:intergenic |
| GATCCATATTGGCATACCAG+TGG | 0.683936 | 7.4:-76909523 | None:intergenic |
| TTCTGTGAGACACTATCATG+TGG | 0.711259 | 7.4:-76907830 | None:intergenic |
| CAAATCCTATAACAACCTTG+CGG | 0.718001 | 7.4:-76909748 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAGAATTAATTTTTTTT+GGG | - | chr7.4:76908566-76908585 | None:intergenic | 10.0% |
| !!! | TTTGAAGAATTAATTTTTTT+TGG | - | chr7.4:76908567-76908586 | None:intergenic | 10.0% |
| !! | AAATTATTATTCTTCTTGAT+AGG | - | chr7.4:76909931-76909950 | None:intergenic | 15.0% |
| !! | AATTATTATTCTTCTTGATA+GGG | - | chr7.4:76909930-76909949 | None:intergenic | 15.0% |
| !! | AGGAAAATAAAAAAAATTGA+AGG | - | chr7.4:76907440-76907459 | None:intergenic | 15.0% |
| !! | CAATCATAATAAACAATAAA+TGG | - | chr7.4:76908096-76908115 | None:intergenic | 15.0% |
| !! | TTACTAGATTTATATATTCT+TGG | - | chr7.4:76907496-76907515 | None:intergenic | 15.0% |
| !! | TTATTGTTTATTATGATTGT+AGG | + | chr7.4:76908097-76908116 | MS.gene74061:intron | 15.0% |
| !!! | AAAAACTAAGCAATTTTTTT+AGG | - | chr7.4:76908035-76908054 | None:intergenic | 15.0% |
| !!! | AAAACTAAGCAATTTTTTTA+GGG | - | chr7.4:76908034-76908053 | None:intergenic | 15.0% |
| !!! | AAAATTGCTTAGTTTTTAAA+AGG | + | chr7.4:76908038-76908057 | MS.gene74061:intron | 15.0% |
| !!! | AATTTTTTTTTTACCTGATT+AGG | - | chr7.4:76909573-76909592 | None:intergenic | 15.0% |
| !!! | ATCATTTTTTCCTAAAAAAT+CGG | - | chr7.4:76906819-76906838 | None:intergenic | 15.0% |
| !!! | TGTTTTTTATTTTAGCTTTA+CGG | + | chr7.4:76907211-76907230 | MS.gene74061:intron | 15.0% |
| !!! | TTTTTATTGCTTATTGTATA+CGG | - | chr7.4:76907410-76907429 | None:intergenic | 15.0% |
| !! | AAAAAGTAAGTACGAAATTT+GGG | + | chr7.4:76907980-76907999 | MS.gene74061:intron | 20.0% |
| !! | AAATTAATTCTTCAAAATGC+TGG | + | chr7.4:76908571-76908590 | MS.gene74061:intron | 20.0% |
| !! | ATAGACCCTTAAAAAAAATT+TGG | - | chr7.4:76908007-76908026 | None:intergenic | 20.0% |
| !! | CAAGTTTAATAATTCTAACT+TGG | + | chr7.4:76908767-76908786 | MS.gene74061:intron | 20.0% |
| !! | CAATAGGTGTAAAATTAATA+AGG | + | chr7.4:76908731-76908750 | MS.gene74061:intron | 20.0% |
| !! | TAAATGAACTCATTAAACAT+TGG | + | chr7.4:76906937-76906956 | MS.gene74061:intron | 20.0% |
| !! | TAATTTCACTCATCATATAA+AGG | + | chr7.4:76909945-76909964 | MS.gene74061:CDS | 20.0% |
| !! | TAGACCCTTAAAAAAAATTT+GGG | - | chr7.4:76908006-76908025 | None:intergenic | 20.0% |
| !! | TGATTTATTAAGTCGTATTT+CGG | + | chr7.4:76906835-76906854 | MS.gene74061:intron | 20.0% |
| !! | TGCATCAAATTAAATATCAT+AGG | - | chr7.4:76907460-76907479 | None:intergenic | 20.0% |
| !! | TGTTTAATGAGTTCATTTAA+AGG | - | chr7.4:76906936-76906955 | None:intergenic | 20.0% |
| !!! | AAATTTCGTACTTACTTTTT+GGG | - | chr7.4:76907980-76907999 | None:intergenic | 20.0% |
| !!! | ATTAATTTTACACCTATTGA+AGG | - | chr7.4:76908730-76908749 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAAGGGTCTATT+AGG | + | chr7.4:76908008-76908027 | MS.gene74061:intron | 20.0% |
| !!! | TATTGATTCAAAATTTACAC+CGG | + | chr7.4:76906552-76906571 | MS.gene74061:intron | 20.0% |
| !!! | TGTTTTTCTCAAATTATTAG+CGG | + | chr7.4:76906697-76906716 | MS.gene74061:intron | 20.0% |
| !!! | TTAAGCAATTTTGTTAACTT+TGG | - | chr7.4:76907129-76907148 | None:intergenic | 20.0% |
| ! | AAAAATTCAGAACTGAATGA+TGG | + | chr7.4:76907716-76907735 | MS.gene74061:CDS | 25.0% |
| ! | ACAACCAAAGGATTTAAATT+TGG | + | chr7.4:76908389-76908408 | MS.gene74061:CDS | 25.0% |
| ! | AGAATTGCATTATTCTTTCT+CGG | + | chr7.4:76907868-76907887 | MS.gene74061:CDS | 25.0% |
| ! | ATATACTTGCATTTGGTAAA+GGG | - | chr7.4:76908843-76908862 | None:intergenic | 25.0% |
| ! | ATATGTGTGCTTATTAGTAA+TGG | + | chr7.4:76908061-76908080 | MS.gene74061:intron | 25.0% |
| ! | ATTGAACATAGAGAATCATT+AGG | + | chr7.4:76907773-76907792 | MS.gene74061:CDS | 25.0% |
| ! | ATTGTTCTTGAATCTAGTTA+GGG | + | chr7.4:76907924-76907943 | MS.gene74061:intron | 25.0% |
| ! | CAAAAAGTAAGTACGAAATT+TGG | + | chr7.4:76907979-76907998 | MS.gene74061:intron | 25.0% |
| ! | CAATATAAATTACACTAGCT+AGG | - | chr7.4:76908158-76908177 | None:intergenic | 25.0% |
| ! | CATTTGAAAATGAAATGAAG+TGG | + | chr7.4:76908971-76908990 | MS.gene74061:CDS | 25.0% |
| ! | CTAGCTAGTGTAATTTATAT+TGG | + | chr7.4:76908156-76908175 | MS.gene74061:intron | 25.0% |
| ! | GAATACATACTTATGAAACA+CGG | - | chr7.4:76906764-76906783 | None:intergenic | 25.0% |
| ! | GAATGAATATAATACCATTG+AGG | + | chr7.4:76909338-76909357 | MS.gene74061:CDS | 25.0% |
| ! | TATTGTTCTTGAATCTAGTT+AGG | + | chr7.4:76907923-76907942 | MS.gene74061:intron | 25.0% |
| ! | TCATTCTTCGAAAGTAAATT+GGG | + | chr7.4:76909249-76909268 | MS.gene74061:CDS | 25.0% |
| ! | TTTAATAATTCTAACTTGGC+AGG | + | chr7.4:76908771-76908790 | MS.gene74061:intron | 25.0% |
| ! | TTTAATGTGATTACATGTGT+CGG | - | chr7.4:76906672-76906691 | None:intergenic | 25.0% |
| !! | AATAATGCAATTCTTTTCGT+AGG | - | chr7.4:76907862-76907881 | None:intergenic | 25.0% |
| !! | CTTCATTTCATTTTCAAATG+TGG | - | chr7.4:76908971-76908990 | None:intergenic | 25.0% |
| !! | TTGTTTTCAATTTCAGTGTT+TGG | + | chr7.4:76907655-76907674 | MS.gene74061:intron | 25.0% |
| !!! | AATTTCGTACTTACTTTTTG+GGG | - | chr7.4:76907979-76907998 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCTAAAAAATCGG+AGG | - | chr7.4:76906816-76906835 | None:intergenic | 25.0% |
| !!! | CAAATTTCGTACTTACTTTT+TGG | - | chr7.4:76907981-76908000 | None:intergenic | 25.0% |
| !!! | TCAACAACAAAGTATTGAAA+AGG | + | chr7.4:76908680-76908699 | MS.gene74061:CDS | 25.0% |
| !!! | TTTTTTCCTAAAAAATCGGA+GGG | - | chr7.4:76906815-76906834 | None:intergenic | 25.0% |
| !!! | TTTTTTTTACCTGATTAGGT+TGG | - | chr7.4:76909569-76909588 | None:intergenic | 25.0% |
| AAATCTCTTGGTTATATTCG+TGG | + | chr7.4:76906964-76906983 | MS.gene74061:intron | 30.0% | |
| ACAATAATGCATATCAGGAT+TGG | + | chr7.4:76908923-76908942 | MS.gene74061:CDS | 30.0% | |
| ACATGAAGTTATATTACCAC+AGG | + | chr7.4:76907515-76907534 | MS.gene74061:intron | 30.0% | |
| ACCAAAGGATTTAAATTTGG+TGG | + | chr7.4:76908392-76908411 | MS.gene74061:CDS | 30.0% | |
| ACCACCAAATTTAAATCCTT+TGG | - | chr7.4:76908396-76908415 | None:intergenic | 30.0% | |
| ATAATACTTCTGCGGAAATT+TGG | + | chr7.4:76908607-76908626 | MS.gene74061:CDS | 30.0% | |
| ATACTTATGAAACACGGATA+CGG | - | chr7.4:76906758-76906777 | None:intergenic | 30.0% | |
| ATCATTAGGCAACAAATTTG+TGG | + | chr7.4:76907787-76907806 | MS.gene74061:CDS | 30.0% | |
| CACACAAAAACACAAAAACA+AGG | - | chr7.4:76906790-76906809 | None:intergenic | 30.0% | |
| CATTCTTATCAACCTTCAAT+AGG | + | chr7.4:76908715-76908734 | MS.gene74061:intron | 30.0% | |
| CTCATTCTTCGAAAGTAAAT+TGG | + | chr7.4:76909248-76909267 | MS.gene74061:CDS | 30.0% | |
| GAATTGCATTATTCTTTCTC+GGG | + | chr7.4:76907869-76907888 | MS.gene74061:CDS | 30.0% | |
| GACTATGATCAATTGTATTG+TGG | + | chr7.4:76908301-76908320 | MS.gene74061:intron | 30.0% | |
| GATATACTTGCATTTGGTAA+AGG | - | chr7.4:76908844-76908863 | None:intergenic | 30.0% | |
| GATCATCCCAAAATATATTG+TGG | - | chr7.4:76909089-76909108 | None:intergenic | 30.0% | |
| GTAAGAGATATACTTGCATT+TGG | - | chr7.4:76908850-76908869 | None:intergenic | 30.0% | |
| GTATATCTCTTACAATGAAG+AGG | + | chr7.4:76908857-76908876 | MS.gene74061:CDS | 30.0% | |
| TAATACTTCTGCGGAAATTT+GGG | + | chr7.4:76908608-76908627 | MS.gene74061:CDS | 30.0% | |
| TCTAATTCTGTGATCCATAT+TGG | - | chr7.4:76909537-76909556 | None:intergenic | 30.0% | |
| TTGATCTTCTGGATATAACT+TGG | - | chr7.4:76909390-76909409 | None:intergenic | 30.0% | |
| TTGTATGTATCAATGAAGCA+CGG | + | chr7.4:76906611-76906630 | MS.gene74061:intron | 30.0% | |
| TTTCGAAGAATGAGAAATGT+AGG | - | chr7.4:76909242-76909261 | None:intergenic | 30.0% | |
| TTTGAATCTCTTTGATCTTC+TGG | - | chr7.4:76909401-76909420 | None:intergenic | 30.0% | |
| ! | AAAACGTACTTTTACTTTGC+CGG | - | chr7.4:76906574-76906593 | None:intergenic | 30.0% |
| ! | TAGAGGCCACAATATATTTT+GGG | + | chr7.4:76909080-76909099 | MS.gene74061:CDS | 30.0% |
| ! | TTAGAGGCCACAATATATTT+TGG | + | chr7.4:76909079-76909098 | MS.gene74061:CDS | 30.0% |
| ! | TTCTCACTTATGATTTGTGT+AGG | + | chr7.4:76909645-76909664 | MS.gene74061:intron | 30.0% |
| !! | AAACAAGGTATTGCTATTAG+AGG | + | chr7.4:76909063-76909082 | MS.gene74061:CDS | 30.0% |
| !!! | TGGGCCCAAATTTTTTTTAA+GGG | + | chr7.4:76907999-76908018 | MS.gene74061:intron | 30.0% |
| !!! | TTGGGCCCAAATTTTTTTTA+AGG | + | chr7.4:76907998-76908017 | MS.gene74061:intron | 30.0% |
| AACATTGGAGTCAAATCTCT+TGG | + | chr7.4:76906952-76906971 | MS.gene74061:intron | 35.0% | |
| AACCATTCACAGAAAAGCAA+TGG | + | chr7.4:76908649-76908668 | MS.gene74061:CDS | 35.0% | |
| AACGTTGGCACTATAATCAT+AGG | - | chr7.4:76907561-76907580 | None:intergenic | 35.0% | |
| AATGAGGTTCACAACATTGA+CGG | + | chr7.4:76909297-76909316 | MS.gene74061:CDS | 35.0% | |
| AATTGTTGGTCCATGCTTAA+GGG | + | chr7.4:76908434-76908453 | MS.gene74061:CDS | 35.0% | |
| AGACCAAAATGGATACTTTG+AGG | + | chr7.4:76909864-76909883 | MS.gene74061:CDS | 35.0% | |
| ATCAGTTGATCAATGAATGG+GGG | + | chr7.4:76909818-76909837 | MS.gene74061:CDS | 35.0% | |
| ATCCTCAATACCAACCTTAT+TGG | + | chr7.4:76909106-76909125 | MS.gene74061:CDS | 35.0% | |
| ATCTTCTGGATATAACTTGG+CGG | - | chr7.4:76909387-76909406 | None:intergenic | 35.0% | |
| ATGATTCCTCCATTATACTG+AGG | - | chr7.4:76907695-76907714 | None:intergenic | 35.0% | |
| ATTATAATGCCTTGAATCCC+AGG | - | chr7.4:76909712-76909731 | None:intergenic | 35.0% | |
| CAAATCCTATAACAACCTTG+CGG | - | chr7.4:76909751-76909770 | None:intergenic | 35.0% | |
| CCTGAACAATAATGCATATC+AGG | + | chr7.4:76908918-76908937 | MS.gene74061:CDS | 35.0% | |
| CCTGATATGCATTATTGTTC+AGG | - | chr7.4:76908921-76908940 | None:intergenic | 35.0% | |
| CGATCAGTTGATCAATGAAT+GGG | + | chr7.4:76909816-76909835 | MS.gene74061:CDS | 35.0% | |
| GATCAGTTGATCAATGAATG+GGG | + | chr7.4:76909817-76909836 | MS.gene74061:CDS | 35.0% | |
| GTAGAGCAATAATACTTCTG+CGG | + | chr7.4:76908599-76908618 | MS.gene74061:intron | 35.0% | |
| GTTATATTCGTGGAACACTT+TGG | + | chr7.4:76906974-76906993 | MS.gene74061:intron | 35.0% | |
| TAACGATGCAGTCGAAAAAA+GGG | + | chr7.4:76909155-76909174 | MS.gene74061:CDS | 35.0% | |
| TAATTGTTGGTCCATGCTTA+AGG | + | chr7.4:76908433-76908452 | MS.gene74061:CDS | 35.0% | |
| TACAAGGATGGACAACATTT+GGG | + | chr7.4:76907741-76907760 | MS.gene74061:CDS | 35.0% | |
| TAGAAAGCTTACTTCAACGT+TGG | - | chr7.4:76907576-76907595 | None:intergenic | 35.0% | |
| TCCATTGTGTCAAGATACAA+GGG | + | chr7.4:76909183-76909202 | MS.gene74061:CDS | 35.0% | |
| TCCTCAATACCAACCTTATT+GGG | + | chr7.4:76909107-76909126 | MS.gene74061:CDS | 35.0% | |
| TCGATCAGTTGATCAATGAA+TGG | + | chr7.4:76909815-76909834 | MS.gene74061:CDS | 35.0% | |
| TTAACGATGCAGTCGAAAAA+AGG | + | chr7.4:76909154-76909173 | MS.gene74061:CDS | 35.0% | |
| TTAAGCATGGACCAACAATT+AGG | - | chr7.4:76908434-76908453 | None:intergenic | 35.0% | |
| TTAATAGGATACCTCGAAGT+AGG | - | chr7.4:76907301-76907320 | None:intergenic | 35.0% | |
| TTAGTAACCACGAAACTCTA+GGG | + | chr7.4:76906528-76906547 | MS.gene74061:intron | 35.0% | |
| TTATAATGCCTTGAATCCCA+GGG | - | chr7.4:76909711-76909730 | None:intergenic | 35.0% | |
| TTCAGCTAGGATGTTTAATG+AGG | + | chr7.4:76909281-76909300 | MS.gene74061:CDS | 35.0% | |
| TTCCATTGTGTCAAGATACA+AGG | + | chr7.4:76909182-76909201 | MS.gene74061:CDS | 35.0% | |
| ! | ATGTGGTTGATTTCTACCAT+GGG | - | chr7.4:76907816-76907835 | None:intergenic | 35.0% |
| ! | CATTATACTGAGGCTTTTGT+GGG | - | chr7.4:76907685-76907704 | None:intergenic | 35.0% |
| ! | GGATTCAAGGCATTATAATG+TGG | + | chr7.4:76909713-76909732 | MS.gene74061:CDS | 35.0% |
| ! | TGGTTTGAAATTATGCAGCT+TGG | + | chr7.4:76908321-76908340 | MS.gene74061:intron | 35.0% |
| ! | TTTTTGCTGAGCCTAATTGT+TGG | + | chr7.4:76908420-76908439 | MS.gene74061:CDS | 35.0% |
| !! | TATGAGATTTTGGTGGCTTA+GGG | - | chr7.4:76908127-76908146 | None:intergenic | 35.0% |
| !! | TTCACGTGACTTTTGATTCT+AGG | + | chr7.4:76908225-76908244 | MS.gene74061:intron | 35.0% |
| !! | TTGTTGATAGCACTTCCAAA+TGG | - | chr7.4:76908892-76908911 | None:intergenic | 35.0% |
| !!! | TACTTACTTTTTGGGGTCTA+AGG | - | chr7.4:76907972-76907991 | None:intergenic | 35.0% |
| AAATTACACTAGCTAGGTGC+AGG | - | chr7.4:76908152-76908171 | None:intergenic | 40.0% | |
| AACAAATTTGTGGTAGCCCA+TGG | + | chr7.4:76907797-76907816 | MS.gene74061:CDS | 40.0% | |
| AATTACACTAGCTAGGTGCA+GGG | - | chr7.4:76908151-76908170 | None:intergenic | 40.0% | |
| AATTTCAAGAACTTGCCTGC+AGG | + | chr7.4:76909784-76909803 | MS.gene74061:CDS | 40.0% | |
| ACAAGGATGGACAACATTTG+GGG | + | chr7.4:76907742-76907761 | MS.gene74061:CDS | 40.0% | |
| ACCATCTCTACTATCCTCAA+TGG | - | chr7.4:76909355-76909374 | None:intergenic | 40.0% | |
| ACCATTGAGGATAGTAGAGA+TGG | + | chr7.4:76909351-76909370 | MS.gene74061:CDS | 40.0% | |
| ACCCTTGTATCTTGACACAA+TGG | - | chr7.4:76909187-76909206 | None:intergenic | 40.0% | |
| AGATACAAGGGTCAGCTTAT+TGG | + | chr7.4:76909195-76909214 | MS.gene74061:CDS | 40.0% | |
| ATATTCGTGGAACACTTTGG+TGG | + | chr7.4:76906977-76906996 | MS.gene74061:intron | 40.0% | |
| ATCTCTTACAATGAAGAGGC+CGG | + | chr7.4:76908861-76908880 | MS.gene74061:CDS | 40.0% | |
| ATGTATCAATGAAGCACGGA+CGG | + | chr7.4:76906615-76906634 | MS.gene74061:intron | 40.0% | |
| CAAAAGCCTCAGTATAATGG+AGG | + | chr7.4:76907686-76907705 | MS.gene74061:CDS | 40.0% | |
| CCACAAAAGCCTCAGTATAA+TGG | + | chr7.4:76907683-76907702 | MS.gene74061:CDS | 40.0% | |
| CTACAAGGATGGACAACATT+TGG | + | chr7.4:76907740-76907759 | MS.gene74061:CDS | 40.0% | |
| CTATGTGTCATCCTACTTTC+AGG | + | chr7.4:76906505-76906524 | MS.gene74061:CDS | 40.0% | |
| CTCAATAGAATCCTACTTCG+AGG | + | chr7.4:76907287-76907306 | MS.gene74061:intron | 40.0% | |
| GAACTACTACTTTCCTCTTG+CGG | - | chr7.4:76908798-76908817 | None:intergenic | 40.0% | |
| GACAGTGAAGAAACCCAATA+AGG | - | chr7.4:76909123-76909142 | None:intergenic | 40.0% | |
| GCAAGTTAGGAGGACTATTA+GGG | - | chr7.4:76909470-76909489 | None:intergenic | 40.0% | |
| GCAGTAGTCAAAACAACCAA+AGG | + | chr7.4:76908377-76908396 | MS.gene74061:CDS | 40.0% | |
| GTGAAGAAACCCAATAAGGT+TGG | - | chr7.4:76909119-76909138 | None:intergenic | 40.0% | |
| GTGGTTACTAACCTGAAAGT+AGG | - | chr7.4:76906519-76906538 | None:intergenic | 40.0% | |
| GTTAGTAACCACGAAACTCT+AGG | + | chr7.4:76906527-76906546 | MS.gene74061:intron | 40.0% | |
| GTTCAAGCAGTTAACGAACA+AGG | + | chr7.4:76908814-76908833 | MS.gene74061:CDS | 40.0% | |
| TACACGAATGAATATGCGCA+AGG | + | chr7.4:76908994-76909013 | MS.gene74061:CDS | 40.0% | |
| TATAAGACCACCCTTAAGCA+TGG | - | chr7.4:76908447-76908466 | None:intergenic | 40.0% | |
| TATTCGTGGAACACTTTGGT+GGG | + | chr7.4:76906978-76906997 | MS.gene74061:intron | 40.0% | |
| TCAATAACCCTAGAGTTTCG+TGG | - | chr7.4:76906538-76906557 | None:intergenic | 40.0% | |
| TCTTCTGGATATAACTTGGC+GGG | - | chr7.4:76909386-76909405 | None:intergenic | 40.0% | |
| TTCTGTGAGACACTATCATG+TGG | - | chr7.4:76907833-76907852 | None:intergenic | 40.0% | |
| ! | CATGTGGTTGATTTCTACCA+TGG | - | chr7.4:76907817-76907836 | None:intergenic | 40.0% |
| ! | CCATTATACTGAGGCTTTTG+TGG | - | chr7.4:76907686-76907705 | None:intergenic | 40.0% |
| ! | CTTTTCTGTGAATGGTTGCA+AGG | - | chr7.4:76908646-76908665 | None:intergenic | 40.0% |
| ! | GGTCTTATAGCAGATACAAC+AGG | + | chr7.4:76908458-76908477 | MS.gene74061:CDS | 40.0% |
| ! | TGGGACAAAACTTTTCAGCT+AGG | + | chr7.4:76909268-76909287 | MS.gene74061:CDS | 40.0% |
| !! | ACCCAATAAGGTTGGTATTG+AGG | - | chr7.4:76909111-76909130 | None:intergenic | 40.0% |
| !! | AGGCCTCAAAGTATCCATTT+TGG | - | chr7.4:76909870-76909889 | None:intergenic | 40.0% |
| !! | CTATGAGATTTTGGTGGCTT+AGG | - | chr7.4:76908128-76908147 | None:intergenic | 40.0% |
| !! | CTCCATTGCTTTTCTGTGAA+TGG | - | chr7.4:76908654-76908673 | None:intergenic | 40.0% |
| !! | GAACTGAATGATGGACTACA+AGG | + | chr7.4:76907725-76907744 | MS.gene74061:CDS | 40.0% |
| !! | TGAATGATGGACTACAAGGA+TGG | + | chr7.4:76907729-76907748 | MS.gene74061:CDS | 40.0% |
| !!! | TGTGAACCCTCCGATTTTTT+AGG | + | chr7.4:76906806-76906825 | MS.gene74061:intron | 40.0% |
| ACAAGGGTCAGCTTATTGGT+TGG | + | chr7.4:76909199-76909218 | MS.gene74061:CDS | 45.0% | |
| ACTAGCACTCTCATTTGCAG+AGG | + | chr7.4:76907595-76907614 | MS.gene74061:intron | 45.0% | |
| AGCCAATTGCCTCTTGGAAT+TGG | + | chr7.4:76909429-76909448 | MS.gene74061:CDS | 45.0% | |
| AGCTTGGATACAAGTGAGTG+AGG | + | chr7.4:76908337-76908356 | MS.gene74061:intron | 45.0% | |
| CTAGGGTTTGCAGAGAAACA+AGG | + | chr7.4:76909048-76909067 | MS.gene74061:CDS | 45.0% | |
| CTCATGTAAGGCAAGTTAGG+AGG | - | chr7.4:76909480-76909499 | None:intergenic | 45.0% | |
| CTTCTGGATATAACTTGGCG+GGG | - | chr7.4:76909385-76909404 | None:intergenic | 45.0% | |
| GACTCAAGTCCAATTCCAAG+AGG | - | chr7.4:76909441-76909460 | None:intergenic | 45.0% | |
| GATCCATATTGGCATACCAG+TGG | - | chr7.4:76909526-76909545 | None:intergenic | 45.0% | |
| GCACTTCCAAATGGAAAACC+CGG | - | chr7.4:76908883-76908902 | None:intergenic | 45.0% | |
| GCATTATAATGTGGACAGCG+TGG | + | chr7.4:76909722-76909741 | MS.gene74061:CDS | 45.0% | |
| GCTCTCATGTAAGGCAAGTT+AGG | - | chr7.4:76909483-76909502 | None:intergenic | 45.0% | |
| GGCAAGTTAGGAGGACTATT+AGG | - | chr7.4:76909471-76909490 | None:intergenic | 45.0% | |
| GGGGGAGAGCAAAAATATCA+GGG | + | chr7.4:76909836-76909855 | MS.gene74061:CDS | 45.0% | |
| GTAGGATGACACATAGCAGA+AGG | - | chr7.4:76906501-76906520 | None:intergenic | 45.0% | |
| GTCAGTGTCTATGTCATGTC+CGG | + | chr7.4:76906729-76906748 | MS.gene74061:intron | 45.0% | |
| GTCCAATTCCAAGAGGCAAT+TGG | - | chr7.4:76909434-76909453 | None:intergenic | 45.0% | |
| GTGAATAGCCAATTGCCTCT+TGG | + | chr7.4:76909423-76909442 | MS.gene74061:CDS | 45.0% | |
| TCAAGGGAAGCTCTCATGTA+AGG | - | chr7.4:76909492-76909511 | None:intergenic | 45.0% | |
| TCAGGGATGACAGACCAAAA+TGG | + | chr7.4:76909853-76909872 | MS.gene74061:CDS | 45.0% | |
| TCTCTTACAATGAAGAGGCC+GGG | + | chr7.4:76908862-76908881 | MS.gene74061:CDS | 45.0% | |
| TGATCGACAATATCACCTGC+AGG | - | chr7.4:76909802-76909821 | None:intergenic | 45.0% | |
| TGCTTCAGCTTCAAAACCTG+TGG | - | chr7.4:76907534-76907553 | None:intergenic | 45.0% | |
| TGGGGGAGAGCAAAAATATC+AGG | + | chr7.4:76909835-76909854 | MS.gene74061:CDS | 45.0% | |
| TTCGTAGTCGCCGTGAAAAA+GGG | - | chr7.4:76909893-76909912 | None:intergenic | 45.0% | |
| TTGACGCTGATGCAATGCTA+GGG | + | chr7.4:76909031-76909050 | MS.gene74061:CDS | 45.0% | |
| TTGGGTTTCTTCACTGTCAC+CGG | + | chr7.4:76909125-76909144 | MS.gene74061:CDS | 45.0% | |
| TTTCGACTGCATCGTTAAGC+TGG | - | chr7.4:76909152-76909171 | None:intergenic | 45.0% | |
| TTTCGTAGTCGCCGTGAAAA+AGG | - | chr7.4:76909894-76909913 | None:intergenic | 45.0% | |
| TTTGACGCTGATGCAATGCT+AGG | + | chr7.4:76909030-76909049 | MS.gene74061:CDS | 45.0% | |
| ! | AGCAGCTGAGCTCTATTTTG+AGG | + | chr7.4:76908481-76908500 | MS.gene74061:CDS | 45.0% |
| ! | CAAGGGTCAGCTTATTGGTT+GGG | + | chr7.4:76909200-76909219 | MS.gene74061:CDS | 45.0% |
| ! | TTTTCACGGCGACTACGAAA+TGG | + | chr7.4:76909894-76909913 | MS.gene74061:CDS | 45.0% |
| !! | ATCAGGATTGGTTCGCATCT+AGG | + | chr7.4:76908935-76908954 | MS.gene74061:CDS | 45.0% |
| !! | TTTGAGGCCTCCCTTTTTCA+CGG | + | chr7.4:76909880-76909899 | MS.gene74061:CDS | 45.0% |
| !!! | GTTTTGACTACTGCTGTGAC+AGG | - | chr7.4:76908371-76908390 | None:intergenic | 45.0% |
| !! | AGTTTATTAATATATATATT+AGG | + | chr7.4:76907383-76907402 | MS.gene74061:intron | 5.0% |
| !!! | TAATTATTTTTTCAATTAAT+AGG | - | chr7.4:76907316-76907335 | None:intergenic | 5.0% |
| ACTGCATCGTTAAGCTGGTC+CGG | - | chr7.4:76909147-76909166 | None:intergenic | 50.0% | |
| CATTCTCACCCTGGGATTCA+AGG | + | chr7.4:76909700-76909719 | MS.gene74061:CDS | 50.0% | |
| CTTCGAGCAGGTTCTTAGAG+AGG | + | chr7.4:76909675-76909694 | MS.gene74061:CDS | 50.0% | |
| GAGCCACTGGTATGCCAATA+TGG | + | chr7.4:76909520-76909539 | MS.gene74061:CDS | 50.0% | |
| GGTCACCGCAAGGTTGTTAT+AGG | + | chr7.4:76909743-76909762 | MS.gene74061:CDS | 50.0% | |
| TGAAACACGGATACGGACAC+CGG | - | chr7.4:76906751-76906770 | None:intergenic | 50.0% | |
| TGTTGGTCCATGCTTAAGGG+TGG | + | chr7.4:76908437-76908456 | MS.gene74061:CDS | 50.0% | |
| ! | AAGAGGCCGGGTTTTCCATT+TGG | + | chr7.4:76908874-76908893 | MS.gene74061:CDS | 50.0% |
| ! | CAATGAAGCACGGACGGATT+AGG | + | chr7.4:76906621-76906640 | MS.gene74061:intron | 50.0% |
| ! | GCAGGGCTATGAGATTTTGG+TGG | - | chr7.4:76908134-76908153 | None:intergenic | 50.0% |
| ! | GGTGCAGGGCTATGAGATTT+TGG | - | chr7.4:76908137-76908156 | None:intergenic | 50.0% |
| ! | GTAGGCATTGTACTTCGAGC+AGG | + | chr7.4:76909663-76909682 | MS.gene74061:intron | 50.0% |
| !! | AGTGGCTCGAAGGGTATCAA+GGG | - | chr7.4:76909508-76909527 | None:intergenic | 50.0% |
| !! | TGTCGGTGTCATGTCGATGT+CGG | - | chr7.4:76906655-76906674 | None:intergenic | 50.0% |
| AGTTAGGGCCGTATCTGAGC+AGG | + | chr7.4:76907939-76907958 | MS.gene74061:intron | 55.0% | |
| CGTCGCAAGCCAACCTAATC+AGG | + | chr7.4:76909557-76909576 | MS.gene74061:CDS | 55.0% | |
| CTTGATACCCTTCGAGCCAC+TGG | + | chr7.4:76909507-76909526 | MS.gene74061:CDS | 55.0% | |
| GTAGTCGCCGTGAAAAAGGG+AGG | - | chr7.4:76909890-76909909 | None:intergenic | 55.0% | |
| GTTAGGGCCGTATCTGAGCA+GGG | + | chr7.4:76907940-76907959 | MS.gene74061:intron | 55.0% | |
| TAACTTGGCAGGACCGCAAG+AGG | + | chr7.4:76908782-76908801 | MS.gene74061:intron | 55.0% | |
| TGGCATACCAGTGGCTCGAA+GGG | - | chr7.4:76909517-76909536 | None:intergenic | 55.0% | |
| TTGGCATACCAGTGGCTCGA+AGG | - | chr7.4:76909518-76909537 | None:intergenic | 55.0% | |
| ! | AGAGAGGCACATTCTCACCC+TGG | + | chr7.4:76909691-76909710 | MS.gene74061:CDS | 55.0% |
| ! | GAGAGGCACATTCTCACCCT+GGG | + | chr7.4:76909692-76909711 | MS.gene74061:CDS | 55.0% |
| !! | CAGTGGCTCGAAGGGTATCA+AGG | - | chr7.4:76909509-76909528 | None:intergenic | 55.0% |
| GCGATCGCCCTGCTCAGATA+CGG | - | chr7.4:76907950-76907969 | None:intergenic | 60.0% | |
| TGGACAGCGTGGTCACCGCA+AGG | + | chr7.4:76909733-76909752 | MS.gene74061:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 76906487 | 76910023 | 76906487 | ID=MS.gene74061 |
| chr7.4 | mRNA | 76906487 | 76910023 | 76906487 | ID=MS.gene74061.t1;Parent=MS.gene74061 |
| chr7.4 | exon | 76906487 | 76906526 | 76906487 | ID=MS.gene74061.t1.exon1;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76906487 | 76906526 | 76906487 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76907537 | 76907583 | 76907537 | ID=MS.gene74061.t1.exon2;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76907537 | 76907583 | 76907537 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76907671 | 76907890 | 76907671 | ID=MS.gene74061.t1.exon3;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76907671 | 76907890 | 76907671 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76908339 | 76908502 | 76908339 | ID=MS.gene74061.t1.exon4;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76908339 | 76908502 | 76908339 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76908603 | 76908701 | 76908603 | ID=MS.gene74061.t1.exon5;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76908603 | 76908701 | 76908603 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76908793 | 76909578 | 76908793 | ID=MS.gene74061.t1.exon6;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76908793 | 76909578 | 76908793 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| chr7.4 | exon | 76909667 | 76910023 | 76909667 | ID=MS.gene74061.t1.exon7;Parent=MS.gene74061.t1 |
| chr7.4 | CDS | 76909667 | 76910023 | 76909667 | ID=cds.MS.gene74061.t1;Parent=MS.gene74061.t1 |
| Gene Sequence |
| Protein sequence |
