Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90963.t1 | XP_013456504.1 | 93.7 | 571 | 17 | 3 | 1 | 552 | 1 | 571 | 0.00E+00 | 1088.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90963.t1 | A0A1P8B8F8 | 37.0 | 549 | 330 | 7 | 3 | 539 | 12 | 556 | 5.2e-104 | 379.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90963.t1 | A0A072UXE0 | 93.7 | 571 | 17 | 3 | 1 | 552 | 1 | 571 | 0.0e+00 | 1088.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062453 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene032541 | PPI |
| MS.gene52090 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene68749 | PPI |
| MS.gene74061 | MS.gene90963 | PPI |
| MS.gene057723 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene68149 | PPI |
| MS.gene014213 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene063101 | PPI |
| MS.gene99993 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene75410 | PPI |
| MS.gene054660 | MS.gene90963 | PPI |
| MS.gene044959 | MS.gene90963 | PPI |
| MS.gene62099 | MS.gene90963 | PPI |
| MS.gene90963 | MS.gene53185 | PPI |
| MS.gene90963 | MS.gene59021 | PPI |
| MS.gene90963 | MS.gene003507 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90963.t1 | MTR_4g074070 | 93.695 | 571 | 17 | 3 | 1 | 552 | 1 | 571 | 0.0 | 1100 |
| MS.gene90963.t1 | MTR_7g024420 | 73.684 | 570 | 132 | 2 | 1 | 552 | 1 | 570 | 0.0 | 877 |
| MS.gene90963.t1 | MTR_5g049180 | 69.649 | 570 | 155 | 2 | 1 | 552 | 1 | 570 | 0.0 | 846 |
| MS.gene90963.t1 | MTR_1g106200 | 45.338 | 547 | 277 | 4 | 3 | 527 | 12 | 558 | 1.35e-174 | 506 |
| MS.gene90963.t1 | MTR_1g106910 | 46.000 | 550 | 272 | 6 | 4 | 529 | 10 | 558 | 8.49e-170 | 493 |
| MS.gene90963.t1 | MTR_1g106790 | 45.065 | 537 | 272 | 5 | 9 | 523 | 18 | 553 | 1.08e-164 | 480 |
| MS.gene90963.t1 | MTR_1g106770 | 45.000 | 520 | 265 | 4 | 29 | 527 | 4 | 523 | 1.43e-160 | 469 |
| MS.gene90963.t1 | MTR_1g106200 | 41.209 | 546 | 266 | 5 | 4 | 527 | 19 | 531 | 1.12e-148 | 439 |
| MS.gene90963.t1 | MTR_3g117800 | 40.458 | 524 | 295 | 10 | 9 | 525 | 1 | 514 | 1.74e-132 | 396 |
| MS.gene90963.t1 | MTR_3g117800 | 43.668 | 458 | 242 | 9 | 81 | 525 | 9 | 463 | 6.55e-128 | 383 |
| MS.gene90963.t1 | MTR_3g117800 | 44.731 | 427 | 228 | 6 | 104 | 525 | 10 | 433 | 3.11e-127 | 380 |
| MS.gene90963.t1 | MTR_1g017020 | 29.032 | 558 | 330 | 16 | 35 | 541 | 353 | 895 | 1.29e-58 | 210 |
| MS.gene90963.t1 | MTR_3g103610 | 30.621 | 467 | 265 | 14 | 43 | 461 | 200 | 655 | 1.22e-56 | 202 |
| MS.gene90963.t1 | MTR_4g121520 | 42.079 | 202 | 91 | 1 | 288 | 489 | 223 | 398 | 4.33e-40 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90963.t1 | AT4G33840 | 53.226 | 558 | 237 | 6 | 16 | 551 | 19 | 574 | 0.0 | 620 |
| MS.gene90963.t1 | AT4G33830 | 54.286 | 560 | 230 | 8 | 9 | 546 | 13 | 568 | 0.0 | 610 |
| MS.gene90963.t1 | AT4G33860 | 53.875 | 542 | 226 | 5 | 16 | 535 | 19 | 558 | 0.0 | 609 |
| MS.gene90963.t1 | AT4G38650 | 40.154 | 518 | 286 | 11 | 22 | 525 | 34 | 541 | 8.82e-131 | 393 |
| MS.gene90963.t1 | AT4G33810 | 36.842 | 551 | 332 | 7 | 1 | 539 | 10 | 556 | 7.13e-126 | 380 |
| MS.gene90963.t1 | AT4G33810 | 36.842 | 551 | 332 | 7 | 1 | 539 | 10 | 556 | 7.13e-126 | 380 |
| MS.gene90963.t1 | AT4G33810 | 36.842 | 551 | 332 | 7 | 1 | 539 | 10 | 556 | 7.13e-126 | 380 |
| MS.gene90963.t1 | AT4G33810 | 40.430 | 465 | 268 | 4 | 84 | 539 | 52 | 516 | 2.39e-122 | 370 |
| MS.gene90963.t1 | AT4G33810 | 40.430 | 465 | 268 | 4 | 84 | 539 | 52 | 516 | 2.39e-122 | 370 |
| MS.gene90963.t1 | AT4G33820 | 35.294 | 561 | 347 | 8 | 1 | 548 | 10 | 567 | 4.99e-121 | 368 |
| MS.gene90963.t1 | AT2G14690 | 36.709 | 553 | 320 | 9 | 18 | 552 | 28 | 568 | 7.02e-117 | 357 |
| MS.gene90963.t1 | AT4G38300 | 42.023 | 257 | 137 | 3 | 175 | 431 | 12 | 256 | 1.32e-67 | 220 |
| MS.gene90963.t1 | AT1G58370 | 28.651 | 541 | 316 | 16 | 35 | 520 | 390 | 915 | 7.48e-59 | 211 |
| MS.gene90963.t1 | AT1G58370 | 28.651 | 541 | 316 | 16 | 35 | 520 | 362 | 887 | 9.08e-59 | 211 |
| MS.gene90963.t1 | AT1G10050 | 27.757 | 526 | 326 | 14 | 43 | 520 | 550 | 1069 | 5.75e-54 | 197 |
| MS.gene90963.t1 | AT1G10050 | 27.757 | 526 | 326 | 14 | 43 | 520 | 518 | 1037 | 7.75e-54 | 197 |
| MS.gene90963.t1 | AT1G10050 | 27.757 | 526 | 326 | 14 | 43 | 520 | 518 | 1037 | 7.75e-54 | 197 |
| MS.gene90963.t1 | AT4G08160 | 26.944 | 553 | 326 | 16 | 35 | 524 | 190 | 727 | 4.34e-53 | 192 |
| MS.gene90963.t1 | AT4G08160 | 28.118 | 473 | 282 | 12 | 35 | 454 | 190 | 657 | 2.88e-49 | 181 |
Find 115 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGTCCATCATTTATTTC+TGG | 0.060365 | 4.2:+34628351 | None:intergenic |
| ATAATACTTATGTGGAAATT+TGG | 0.168155 | 4.2:-34627746 | MS.gene90963:CDS |
| GAGAGTGAATAAACCCATTT+TGG | 0.219642 | 4.2:+34627214 | None:intergenic |
| ATCCTAAGTATCAACCAAAA+TGG | 0.221542 | 4.2:-34627228 | MS.gene90963:CDS |
| CTGCTTCTCGTTTGCCAATA+TGG | 0.254889 | 4.2:-34626814 | MS.gene90963:CDS |
| GTTATACTCATTAATAAATA+AGG | 0.255913 | 4.2:+34627006 | None:intergenic |
| GTAGTCCATCATTTATTTCT+GGG | 0.282535 | 4.2:+34628352 | None:intergenic |
| CTGCTAAGTTAAGCTGGTTT+GGG | 0.286004 | 4.2:+34627191 | None:intergenic |
| AGATACAAGGGCCAAGTTAT+TGG | 0.302678 | 4.2:-34627139 | MS.gene90963:CDS |
| CTCCATTTCTCATTCTTTGA+AGG | 0.334895 | 4.2:-34627094 | MS.gene90963:CDS |
| TAATTGTTGGTCTATGCTTA+AGG | 0.340081 | 4.2:-34627961 | MS.gene90963:CDS |
| AGGCAATTGCCGCTTGGAAT+TGG | 0.344122 | 4.2:-34626905 | MS.gene90963:CDS |
| TACAGGGATGGACATCATTT+GGG | 0.347819 | 4.2:-34628332 | MS.gene90963:CDS |
| ACTGCTAAGTTAAGCTGGTT+TGG | 0.351329 | 4.2:+34627190 | None:intergenic |
| ATGAACCTGGTTAAATGCTT+TGG | 0.368490 | 4.2:+34627048 | None:intergenic |
| TCTAATTCTGTAATCCATAT+TGG | 0.372646 | 4.2:+34626800 | None:intergenic |
| ACCAAGATTGGTTCTCATCT+AGG | 0.377645 | 4.2:-34627399 | MS.gene90963:CDS |
| AATAAACCAAAGTTTCCATT+TGG | 0.380065 | 4.2:-34627460 | MS.gene90963:CDS |
| AATTGTTGGTCTATGCTTAA+GGG | 0.388951 | 4.2:-34627960 | MS.gene90963:CDS |
| GCAAGTTGAGAGGGAGGGAA+GGG | 0.410237 | 4.2:+34626867 | None:intergenic |
| TCATTCTTTGAAGGTAAACT+TGG | 0.410337 | 4.2:-34627085 | MS.gene90963:CDS |
| CTACAGGGATGGACATCATT+TGG | 0.410813 | 4.2:-34628333 | MS.gene90963:CDS |
| GCACTTCCAAATGGAAACTT+TGG | 0.412889 | 4.2:+34627454 | None:intergenic |
| GTCCTTGTTCGTCTAGTGCT+TGG | 0.413467 | 4.2:+34627518 | None:intergenic |
| TGTTGCAAGCCAATCTAATC+AGG | 0.413602 | 4.2:-34626777 | MS.gene90963:intron |
| TTGACATTACCTGATTAGAT+TGG | 0.416962 | 4.2:+34626768 | None:intergenic |
| TACCTTCAAAGAATGAGAAA+TGG | 0.422772 | 4.2:+34627092 | None:intergenic |
| CACTCTCACCCAGGGGTTCA+AGG | 0.423710 | 4.2:-34626302 | MS.gene90963:CDS |
| GGCAAGTTGAGAGGGAGGGA+AGG | 0.424561 | 4.2:+34626866 | None:intergenic |
| AACAAATTCAAAGTGTGAAT+AGG | 0.428320 | 4.2:-34626925 | MS.gene90963:CDS |
| ACAACCGTGCGTACCAAGAT+TGG | 0.432597 | 4.2:-34627411 | MS.gene90963:CDS |
| ATATACTCGCATTTGGTAAA+GGG | 0.432945 | 4.2:+34627494 | None:intergenic |
| AGAAATAAATGATGGACTAC+AGG | 0.433056 | 4.2:-34628349 | MS.gene90963:CDS |
| CTATTTATTGCACTTCCAAA+TGG | 0.433671 | 4.2:+34627445 | None:intergenic |
| GTAATATATATACTCGCATT+TGG | 0.435045 | 4.2:+34627487 | None:intergenic |
| TTTGGACTGCTAAGTTAAGC+TGG | 0.440724 | 4.2:+34627185 | None:intergenic |
| TTCCATTGTTGTTCTGTGAA+TGG | 0.442187 | 4.2:+34627702 | None:intergenic |
| TATATACTCGCATTTGGTAA+AGG | 0.445171 | 4.2:+34627493 | None:intergenic |
| GCGATTGTTAAAACAAATGA+AGG | 0.447006 | 4.2:-34628017 | MS.gene90963:CDS |
| CAACATCCCAACCAATAACT+TGG | 0.449449 | 4.2:+34627128 | None:intergenic |
| TTGTTCTGTGAATGGTTGTA+AGG | 0.456277 | 4.2:+34627710 | None:intergenic |
| CATTTGAAAATGAAATGAAA+TGG | 0.462838 | 4.2:-34627363 | MS.gene90963:CDS |
| ATACAACATAGAGAATCATT+AGG | 0.469427 | 4.2:-34628300 | MS.gene90963:CDS |
| TCCTAAGTATCAACCAAAAT+GGG | 0.472270 | 4.2:-34627227 | MS.gene90963:CDS |
| CAAGGGCCAAGTTATTGGTT+GGG | 0.475373 | 4.2:-34627134 | MS.gene90963:CDS |
| TTCTGTTGTGGGAAGATACA+AGG | 0.475645 | 4.2:-34627152 | MS.gene90963:CDS |
| CCATTGTACTGAGGCTTCTG+TGG | 0.482877 | 4.2:+34628390 | None:intergenic |
| AGAAGCAGTAAGGGTATCAA+TGG | 0.488249 | 4.2:+34626829 | None:intergenic |
| ATTGCCGCTTGGAATTGGCT+TGG | 0.488568 | 4.2:-34626900 | MS.gene90963:CDS |
| TCAAGATCAAAGCATTGAAA+AGG | 0.491272 | 4.2:-34627673 | MS.gene90963:intron |
| ACAACTCAAGGAGTCCATCT+TGG | 0.491918 | 4.2:+34626135 | None:intergenic |
| GGAAGCTGAGCTCTACTTTG+AGG | 0.494676 | 4.2:-34627913 | MS.gene90963:intron |
| ATAGAGTAATTCTTCTTGCT+AGG | 0.494726 | 4.2:+34626074 | None:intergenic |
| ATTACAATACCTTGAACCCC+TGG | 0.497957 | 4.2:+34626293 | None:intergenic |
| ACAAGGGCCAAGTTATTGGT+TGG | 0.504170 | 4.2:-34627135 | MS.gene90963:CDS |
| TCACACAATATTACTGTTCG+AGG | 0.504212 | 4.2:-34627271 | MS.gene90963:CDS |
| ACTGCAGCATTTGATCAGCT+TGG | 0.504894 | 4.2:+34627302 | None:intergenic |
| ACCTAGATGAGAACCAATCT+TGG | 0.505709 | 4.2:+34627398 | None:intergenic |
| CATTGTACTGAGGCTTCTGT+GGG | 0.507610 | 4.2:+34628391 | None:intergenic |
| TCAATGGAAGCTCTCATGTA+AGG | 0.515536 | 4.2:+34626845 | None:intergenic |
| GGTTTCATAGCAGATACATC+AGG | 0.520938 | 4.2:-34627936 | MS.gene90963:CDS |
| AAAAGAATGAATTCTGTTGT+GGG | 0.523267 | 4.2:-34627163 | MS.gene90963:CDS |
| TTGGCAAACGAGAAGCAGTA+AGG | 0.525147 | 4.2:+34626819 | None:intergenic |
| TAGAGTAATTCTTCTTGCTA+GGG | 0.532300 | 4.2:+34626075 | None:intergenic |
| CAAAACCCAGAAATAAATGA+TGG | 0.533809 | 4.2:-34628357 | MS.gene90963:CDS |
| TTAATAAATAAGGTGGCTTG+TGG | 0.537468 | 4.2:+34627016 | None:intergenic |
| GTGGACAGCATGGACACCGC+AGG | 0.544659 | 4.2:-34626270 | MS.gene90963:CDS |
| TAATGAGTATAACACAATTG+AGG | 0.545937 | 4.2:-34626996 | MS.gene90963:CDS |
| GTAGAGTAATAATACTTATG+TGG | 0.553769 | 4.2:-34627754 | MS.gene90963:intron |
| TGACAAACTAATATCTGAGT+GGG | 0.553941 | 4.2:-34626186 | MS.gene90963:CDS |
| GTGAATAGGCAATTGCCGCT+TGG | 0.559881 | 4.2:-34626911 | MS.gene90963:CDS |
| TGTTGGTCTATGCTTAAGGG+TGG | 0.565512 | 4.2:-34627957 | MS.gene90963:CDS |
| ATCATTAGGTAACAAATATG+TGG | 0.568281 | 4.2:-34628286 | MS.gene90963:CDS |
| ATGTATGTCATCATACTCGC+AGG | 0.570894 | 4.2:-34629937 | MS.gene90963:intron |
| GTGGATCAATATTATGAACC+TGG | 0.571439 | 4.2:+34627035 | None:intergenic |
| AGAGAGGCACACTCTCACCC+AGG | 0.571476 | 4.2:-34626311 | MS.gene90963:CDS |
| CTCATGTAAGGCAAGTTGAG+AGG | 0.574507 | 4.2:+34626857 | None:intergenic |
| ACAATTGAGGATAGTAGAGA+TGG | 0.575559 | 4.2:-34626983 | MS.gene90963:CDS |
| ATACTCATTAATAAATAAGG+TGG | 0.578304 | 4.2:+34627009 | None:intergenic |
| TTCAGCCAAAGCATTTAACC+AGG | 0.582794 | 4.2:-34627053 | MS.gene90963:CDS |
| CATGCAGGAACGGAAGAGAA+AGG | 0.585673 | 4.2:-34627548 | MS.gene90963:intron |
| TCATGTAAGGCAAGTTGAGA+GGG | 0.593623 | 4.2:+34626858 | None:intergenic |
| CCACAGAAGCCTCAGTACAA+TGG | 0.596512 | 4.2:-34628390 | MS.gene90963:CDS |
| GCTTGGTTACAAGTGAGTAA+TGG | 0.599139 | 4.2:-34628056 | MS.gene90963:CDS |
| AACCATTCACAGAACAACAA+TGG | 0.601388 | 4.2:-34627704 | MS.gene90963:CDS |
| TGGCAAACGAGAAGCAGTAA+GGG | 0.602105 | 4.2:+34626820 | None:intergenic |
| GTATTGTAATGTGGACAGCA+TGG | 0.607804 | 4.2:-34626280 | MS.gene90963:CDS |
| TTACAATACCTTGAACCCCT+GGG | 0.613681 | 4.2:+34626294 | None:intergenic |
| TAAATGATGGACTACAGGGA+TGG | 0.614495 | 4.2:-34628344 | MS.gene90963:CDS |
| GTTTCATAGCAGATACATCA+GGG | 0.616391 | 4.2:-34627935 | MS.gene90963:CDS |
| TTAGGGACAACAGACCAAGA+TGG | 0.617849 | 4.2:-34626149 | MS.gene90963:CDS |
| GAAATAAATGATGGACTACA+GGG | 0.623693 | 4.2:-34628348 | MS.gene90963:CDS |
| GACAAACTAATATCTGAGTG+GGG | 0.623791 | 4.2:-34626185 | MS.gene90963:CDS |
| GAGAGGCACACTCTCACCCA+GGG | 0.625535 | 4.2:-34626310 | MS.gene90963:CDS |
| TGTAAGGCAAGTTGAGAGGG+AGG | 0.629805 | 4.2:+34626861 | None:intergenic |
| ATTATTCCTCCATTGTACTG+AGG | 0.630818 | 4.2:+34628381 | None:intergenic |
| TACACAAATGAATACGCACC+AGG | 0.632244 | 4.2:-34627340 | MS.gene90963:CDS |
| TGCTAAGTTAAGCTGGTTTG+GGG | 0.635037 | 4.2:+34627192 | None:intergenic |
| AGAACCAATCTTGGTACGCA+CGG | 0.635919 | 4.2:+34627407 | None:intergenic |
| GTATGATGACATACATCAGA+AGG | 0.636716 | 4.2:+34629944 | None:intergenic |
| GGGTTCAAGGTATTGTAATG+TGG | 0.638497 | 4.2:-34626289 | MS.gene90963:CDS |
| TTGTCAACAACATCACCTGT+TGG | 0.643740 | 4.2:+34626203 | None:intergenic |
| ACAAACTAATATCTGAGTGG+GGG | 0.644964 | 4.2:-34626184 | MS.gene90963:CDS |
| TGGACAGCATGGACACCGCA+GGG | 0.648221 | 4.2:-34626269 | MS.gene90963:CDS |
| GTAAGGCAAGTTGAGAGGGA+GGG | 0.653299 | 4.2:+34626862 | None:intergenic |
| CAGAAGCCTCAGTACAATGG+AGG | 0.654580 | 4.2:-34628387 | MS.gene90963:CDS |
| TTGACAAACTAATATCTGAG+TGG | 0.663292 | 4.2:-34626187 | MS.gene90963:CDS |
| GACTCCAAGCCAATTCCAAG+CGG | 0.675630 | 4.2:+34626896 | None:intergenic |
| TCTGTTGTGGGAAGATACAA+GGG | 0.678876 | 4.2:-34627151 | MS.gene90963:CDS |
| GTCCAAGCACTAGACGAACA+AGG | 0.680698 | 4.2:-34627520 | MS.gene90963:CDS |
| ACAGGGATGGACATCATTTG+GGG | 0.680750 | 4.2:-34628331 | MS.gene90963:CDS |
| CTACGAGCAAGCTCTTAGAG+AGG | 0.692802 | 4.2:-34626327 | MS.gene90963:CDS |
| TTTCATAGCAGATACATCAG+GGG | 0.754520 | 4.2:-34627934 | MS.gene90963:CDS |
| AGAGGCACACTCTCACCCAG+GGG | 0.761814 | 4.2:-34626309 | MS.gene90963:CDS |
| CACATCTTATAGCAACCCTG+CGG | 0.776758 | 4.2:+34626254 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAAAAAAAAAATTGATT+TGG | - | chr4.2:34626387-34626406 | MS.gene90963:intron | 10.0% |
| !! | ATAAATAGAAAAACAAATAT+TGG | + | chr4.2:34629222-34629241 | None:intergenic | 10.0% |
| !! | ATATATTAGATAACTATAAA+TGG | - | chr4.2:34626190-34626209 | MS.gene90963:CDS | 10.0% |
| !! | ATGTTAATTAAAATTAAACT+TGG | + | chr4.2:34628389-34628408 | None:intergenic | 10.0% |
| !! | TAAAATAGAAAAAATAATAC+TGG | + | chr4.2:34629541-34629560 | None:intergenic | 10.0% |
| !! | TAAAATTAACAATTGAAAAT+GGG | + | chr4.2:34626674-34626693 | None:intergenic | 10.0% |
| !! | TATTATTTGAATGATAAATA+AGG | - | chr4.2:34628106-34628125 | MS.gene90963:intron | 10.0% |
| !! | TATTTAAAAAAATAAAAGTC+GGG | - | chr4.2:34626964-34626983 | MS.gene90963:CDS | 10.0% |
| !! | TTAAAATTAACAATTGAAAA+TGG | + | chr4.2:34626675-34626694 | None:intergenic | 10.0% |
| !!! | AAGTTTAATTTTAATTAACA+TGG | - | chr4.2:34628388-34628407 | MS.gene90963:CDS | 10.0% |
| !!! | ATCTTTAAAAATATCATTTT+TGG | - | chr4.2:34627066-34627085 | MS.gene90963:CDS | 10.0% |
| !!! | ATTTATTTTATTCAATTATG+TGG | + | chr4.2:34626731-34626750 | None:intergenic | 10.0% |
| !!! | TAATTTGAAATTTCAAATTA+TGG | + | chr4.2:34627055-34627036 | None:intergenic | 10.0% |
| !!! | TCTTAATATATTTTTTTGTT+TGG | + | chr4.2:34627190-34627209 | None:intergenic | 10.0% |
| !!! | TTGATAACTATAAAATTTAA+AGG | - | chr4.2:34628351-34628370 | MS.gene90963:CDS | 10.0% |
| !!! | TTTATTTTATTCAATTATGT+GGG | + | chr4.2:34626730-34626749 | None:intergenic | 10.0% |
| !! | GTTATACTCATTAATAAATA+AGG | + | chr4.2:34628956-34628975 | None:intergenic | 15.0% |
| !! | TTTACAGATGTATTAAAATT+TGG | + | chr4.2:34628173-34628192 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAATTGATTTGG+AGG | - | chr4.2:34626390-34626409 | MS.gene90963:intron | 15.0% |
| !! | AAAACAAGTAATAAGTTAGA+GGG | + | chr4.2:34627528-34627547 | None:intergenic | 20.0% |
| !! | AATTTCAAAAATTTACCAAC+AGG | - | chr4.2:34629741-34629760 | MS.gene90963:intron | 20.0% |
| !! | ATAATACTTATGTGGAAATT+TGG | - | chr4.2:34628213-34628232 | MS.gene90963:intron | 20.0% |
| !! | ATACTCATTAATAAATAAGG+TGG | + | chr4.2:34628953-34628972 | None:intergenic | 20.0% |
| !! | ATTTCAAATTATGGAAAATG+TGG | + | chr4.2:34627027-34627046 | None:intergenic | 20.0% |
| !! | CATTGTTTGAATGATAAATT+TGG | - | chr4.2:34626871-34626890 | MS.gene90963:CDS | 20.0% |
| !! | CATTTGAAAATGAAATGAAA+TGG | - | chr4.2:34628596-34628615 | MS.gene90963:intron | 20.0% |
| !! | TTGAAAATGGGATAATTAAA+AGG | + | chr4.2:34626662-34626681 | None:intergenic | 20.0% |
| !!! | AACATTTATTTCTGTTTTTG+AGG | - | chr4.2:34627457-34627476 | MS.gene90963:CDS | 20.0% |
| !!! | AATAATATGCACTGATTTAT+AGG | - | chr4.2:34627843-34627862 | MS.gene90963:intron | 20.0% |
| !!! | AATGAAGGATTTAAATTTTG+TGG | - | chr4.2:34627957-34627976 | MS.gene90963:CDS | 20.0% |
| !!! | AATTAGTGATCGATTAATTT+TGG | - | chr4.2:34626143-34626162 | MS.gene90963:CDS | 20.0% |
| !!! | AGTTTTTTTAGCTATGTTAT+TGG | + | chr4.2:34626500-34626519 | None:intergenic | 20.0% |
| !!! | ATTCTTTGATACTGTTTTAA+GGG | + | chr4.2:34627336-34627355 | None:intergenic | 20.0% |
| !!! | TATCAATTGTGTTGTTTTAT+TGG | + | chr4.2:34629943-34629962 | None:intergenic | 20.0% |
| !!! | TATTCTTTGATACTGTTTTA+AGG | + | chr4.2:34627337-34627356 | None:intergenic | 20.0% |
| !!! | TTGGATAAACTTTAAAATGA+AGG | - | chr4.2:34626890-34626909 | MS.gene90963:CDS | 20.0% |
| !!! | TTTGAATTTGTTTGATTTTC+TGG | + | chr4.2:34629026-34629045 | None:intergenic | 20.0% |
| ! | AAAAAGAATGAATTCTGTTG+TGG | - | chr4.2:34628795-34628814 | MS.gene90963:intron | 25.0% |
| ! | AAAAGAATGAATTCTGTTGT+GGG | - | chr4.2:34628796-34628815 | MS.gene90963:intron | 25.0% |
| ! | AACAAATTCAAAGTGTGAAT+AGG | - | chr4.2:34629034-34629053 | MS.gene90963:intron | 25.0% |
| ! | AATAAACCAAAGTTTCCATT+TGG | - | chr4.2:34628499-34628518 | MS.gene90963:intron | 25.0% |
| ! | AATACATTTCTCTTATAGTG+TGG | - | chr4.2:34626783-34626802 | MS.gene90963:CDS | 25.0% |
| ! | AGAAAATACATAAAGAGTGA+TGG | + | chr4.2:34626573-34626592 | None:intergenic | 25.0% |
| ! | AGGTAAACAACTAATTTCAT+AGG | - | chr4.2:34628306-34628325 | MS.gene90963:CDS | 25.0% |
| ! | AGTTATCAATTGTCTGAATA+TGG | + | chr4.2:34628340-34628359 | None:intergenic | 25.0% |
| ! | ATACAACATAGAGAATCATT+AGG | - | chr4.2:34627659-34627678 | MS.gene90963:intron | 25.0% |
| ! | ATACGGTTTATTACATTACA+TGG | - | chr4.2:34627493-34627512 | MS.gene90963:CDS | 25.0% |
| ! | ATCATTAGGTAACAAATATG+TGG | - | chr4.2:34627673-34627692 | MS.gene90963:intron | 25.0% |
| ! | CAATCAAAGCAAAATAATGT+TGG | + | chr4.2:34626333-34626352 | None:intergenic | 25.0% |
| ! | GAAAACAAGTAATAAGTTAG+AGG | + | chr4.2:34627529-34627548 | None:intergenic | 25.0% |
| ! | GTAATATATATACTCGCATT+TGG | + | chr4.2:34628475-34628494 | None:intergenic | 25.0% |
| ! | GTAGAGTAATAATACTTATG+TGG | - | chr4.2:34628205-34628224 | MS.gene90963:intron | 25.0% |
| ! | TAAAAAAATAAAAGTCGGGA+GGG | - | chr4.2:34626968-34626987 | MS.gene90963:CDS | 25.0% |
| ! | TAATACTGGATTGTCTAATA+TGG | + | chr4.2:34629527-34629546 | None:intergenic | 25.0% |
| ! | TAATGAGTATAACACAATTG+AGG | - | chr4.2:34628963-34628982 | MS.gene90963:intron | 25.0% |
| ! | TCTAATTCTGTAATCCATAT+TGG | + | chr4.2:34629162-34629181 | None:intergenic | 25.0% |
| ! | TTAAAAAAATAAAAGTCGGG+AGG | - | chr4.2:34626967-34626986 | MS.gene90963:CDS | 25.0% |
| ! | TTTGTAATCTCCATGAAAAA+GGG | + | chr4.2:34629850-34629869 | None:intergenic | 25.0% |
| !! | CTATTTTACTCATTATGACT+TGG | - | chr4.2:34629553-34629572 | MS.gene90963:intron | 25.0% |
| !! | TATTTTGCTTTGATTGAAAG+TGG | - | chr4.2:34626337-34626356 | MS.gene90963:CDS | 25.0% |
| !! | TTTTGTAATCTCCATGAAAA+AGG | + | chr4.2:34629851-34629870 | None:intergenic | 25.0% |
| !!! | AGATGAAGAAAAAAAGTGTT+AGG | + | chr4.2:34627279-34627298 | None:intergenic | 25.0% |
| !!! | CAACAGAATTCATTCTTTTT+TGG | + | chr4.2:34628795-34628814 | None:intergenic | 25.0% |
| !!! | GTTTTATTGGAATCTTCTTT+TGG | + | chr4.2:34629930-34629949 | None:intergenic | 25.0% |
| AAGTGTTAGGATGAGATAAT+CGG | + | chr4.2:34627266-34627285 | None:intergenic | 30.0% | |
| AATTATGTGGGACTGAATTA+AGG | + | chr4.2:34626718-34626737 | None:intergenic | 30.0% | |
| ATAGAGTAATTCTTCTTGCT+AGG | + | chr4.2:34629888-34629907 | None:intergenic | 30.0% | |
| ATATACTCGCATTTGGTAAA+GGG | + | chr4.2:34628468-34628487 | None:intergenic | 30.0% | |
| ATCCTAAGTATCAACCAAAA+TGG | - | chr4.2:34628731-34628750 | MS.gene90963:intron | 30.0% | |
| CAAAACCCAGAAATAAATGA+TGG | - | chr4.2:34627602-34627621 | MS.gene90963:intron | 30.0% | |
| CATTGTGAGATTTACTTTGT+GGG | + | chr4.2:34626304-34626323 | None:intergenic | 30.0% | |
| CTATTTATTGCACTTCCAAA+TGG | + | chr4.2:34628517-34628536 | None:intergenic | 30.0% | |
| GCGATTGTTAAAACAAATGA+AGG | - | chr4.2:34627942-34627961 | MS.gene90963:CDS | 30.0% | |
| GGGATGTATTATACTTTATC+TGG | - | chr4.2:34627755-34627774 | MS.gene90963:intron | 30.0% | |
| TACCTTCAAAGAATGAGAAA+TGG | + | chr4.2:34628870-34628889 | None:intergenic | 30.0% | |
| TAGAGTAATTCTTCTTGCTA+GGG | + | chr4.2:34629887-34629906 | None:intergenic | 30.0% | |
| TATATACTCGCATTTGGTAA+AGG | + | chr4.2:34628469-34628488 | None:intergenic | 30.0% | |
| TCATTGTGAGATTTACTTTG+TGG | + | chr4.2:34626305-34626324 | None:intergenic | 30.0% | |
| TCCTAAGTATCAACCAAAAT+GGG | - | chr4.2:34628732-34628751 | MS.gene90963:intron | 30.0% | |
| TGACAAACTAATATCTGAGT+GGG | - | chr4.2:34629773-34629792 | MS.gene90963:intron | 30.0% | |
| TGTAGTCCATCATTTATTTC+TGG | + | chr4.2:34627611-34627630 | None:intergenic | 30.0% | |
| TTAATAAATAAGGTGGCTTG+TGG | + | chr4.2:34628946-34628965 | None:intergenic | 30.0% | |
| TTGACAAACTAATATCTGAG+TGG | - | chr4.2:34629772-34629791 | MS.gene90963:intron | 30.0% | |
| TTGACATTACCTGATTAGAT+TGG | + | chr4.2:34629194-34629213 | None:intergenic | 30.0% | |
| TTTACATTCGTGATTTGAGT+AGG | - | chr4.2:34629602-34629621 | MS.gene90963:intron | 30.0% | |
| TTTACTCATAAAGTGTGAAC+AGG | + | chr4.2:34626373-34626392 | None:intergenic | 30.0% | |
| TTTCTCTTATAGTGTGGTAA+TGG | - | chr4.2:34626789-34626808 | MS.gene90963:CDS | 30.0% | |
| ! | AAGTATAATACATCCCCTTT+TGG | + | chr4.2:34627751-34627770 | None:intergenic | 30.0% |
| ! | AATTGTTGGTCTATGCTTAA+GGG | - | chr4.2:34627999-34628018 | MS.gene90963:CDS | 30.0% |
| ! | ATTTTCTGGATGTAACTTGA+TGG | + | chr4.2:34629012-34629031 | None:intergenic | 30.0% |
| ! | GTAGTCCATCATTTATTTCT+GGG | + | chr4.2:34627610-34627629 | None:intergenic | 30.0% |
| ! | TAATTGTTGGTCTATGCTTA+AGG | - | chr4.2:34627998-34628017 | MS.gene90963:CDS | 30.0% |
| ! | TCATTCTTTGAAGGTAAACT+TGG | - | chr4.2:34628874-34628893 | MS.gene90963:intron | 30.0% |
| ! | TGGAAATAGTTATCTTTTCC+TGG | + | chr4.2:34628640-34628659 | None:intergenic | 30.0% |
| ! | TTTTTGCTGAGTCTAATTGT+TGG | - | chr4.2:34627985-34628004 | MS.gene90963:CDS | 30.0% |
| !! | AGAAATAAATGATGGACTAC+AGG | - | chr4.2:34627610-34627629 | MS.gene90963:intron | 30.0% |
| !! | CACTGATTTATAGGTAGTTA+TGG | - | chr4.2:34627852-34627871 | MS.gene90963:intron | 30.0% |
| !! | GAAATAAATGATGGACTACA+GGG | - | chr4.2:34627611-34627630 | MS.gene90963:intron | 30.0% |
| !! | TACTTTGAGGTACTTAAGTA+TGG | - | chr4.2:34628059-34628078 | MS.gene90963:intron | 30.0% |
| !! | TCAAGATCAAAGCATTGAAA+AGG | - | chr4.2:34628286-34628305 | MS.gene90963:CDS | 30.0% |
| !! | TTTTAATTAACATGGCATGC+AGG | - | chr4.2:34628396-34628415 | MS.gene90963:CDS | 30.0% |
| !!! | TGTGGTAATGGTACAATTTT+TGG | - | chr4.2:34626801-34626820 | MS.gene90963:CDS | 30.0% |
| AAAAGATTCACCTCCAAAAG+GGG | - | chr4.2:34627735-34627754 | MS.gene90963:CDS | 35.0% | |
| AACCATTCACAGAACAACAA+TGG | - | chr4.2:34628255-34628274 | MS.gene90963:intron | 35.0% | |
| ACAAACTAATATCTGAGTGG+GGG | - | chr4.2:34629775-34629794 | MS.gene90963:intron | 35.0% | |
| ACAATTGAGGATAGTAGAGA+TGG | - | chr4.2:34628976-34628995 | MS.gene90963:intron | 35.0% | |
| ACATAAAGACATGCAACTAC+AGG | - | chr4.2:34627373-34627392 | MS.gene90963:CDS | 35.0% | |
| ATCTTTAACTAGTGTCCAAG+AGG | - | chr4.2:34627295-34627314 | MS.gene90963:CDS | 35.0% | |
| ATGAACCTGGTTAAATGCTT+TGG | + | chr4.2:34628914-34628933 | None:intergenic | 35.0% | |
| ATTATTCCTCCATTGTACTG+AGG | + | chr4.2:34627581-34627600 | None:intergenic | 35.0% | |
| CAAAAGATTCACCTCCAAAA+GGG | - | chr4.2:34627734-34627753 | MS.gene90963:CDS | 35.0% | |
| CTCCATTTCTCATTCTTTGA+AGG | - | chr4.2:34628865-34628884 | MS.gene90963:intron | 35.0% | |
| GACAAACTAATATCTGAGTG+GGG | - | chr4.2:34629774-34629793 | MS.gene90963:intron | 35.0% | |
| GTATGATGACATACATCAGA+AGG | + | chr4.2:34626018-34626037 | None:intergenic | 35.0% | |
| GTGGATCAATATTATGAACC+TGG | + | chr4.2:34628927-34628946 | None:intergenic | 35.0% | |
| GTTTCATAGCAGATACATCA+GGG | - | chr4.2:34628024-34628043 | MS.gene90963:CDS | 35.0% | |
| TATTCTGACTACTTGAGTGT+GGG | + | chr4.2:34629347-34629366 | None:intergenic | 35.0% | |
| TCACACAATATTACTGTTCG+AGG | - | chr4.2:34628688-34628707 | MS.gene90963:intron | 35.0% | |
| TTATTCTGACTACTTGAGTG+TGG | + | chr4.2:34629348-34629367 | None:intergenic | 35.0% | |
| TTGTTCTGTGAATGGTTGTA+AGG | + | chr4.2:34628252-34628271 | None:intergenic | 35.0% | |
| TTTCATAGCAGATACATCAG+GGG | - | chr4.2:34628025-34628044 | MS.gene90963:CDS | 35.0% | |
| ! | GAGAGTGAATAAACCCATTT+TGG | + | chr4.2:34628748-34628767 | None:intergenic | 35.0% |
| ! | TATAATACATCCCCTTTTGG+AGG | + | chr4.2:34627748-34627767 | None:intergenic | 35.0% |
| ! | TTCCATTGTTGTTCTGTGAA+TGG | + | chr4.2:34628260-34628279 | None:intergenic | 35.0% |
| !! | CTTTTGGAGGTGAATCTTTT+GGG | + | chr4.2:34627735-34627754 | None:intergenic | 35.0% |
| !! | GTTTTAACAATCGCTGTTAC+AGG | + | chr4.2:34627936-34627955 | None:intergenic | 35.0% |
| !! | TTGATTTGGAGGTAAAATCC+TGG | - | chr4.2:34626401-34626420 | MS.gene90963:intron | 35.0% |
| !! | TTTTGGGAGACACTATCATA+TGG | + | chr4.2:34627719-34627738 | None:intergenic | 35.0% |
| !!! | ACCCATTTTGGTTGATACTT+AGG | + | chr4.2:34628736-34628755 | None:intergenic | 35.0% |
| AAGAGTCGTCCTATCTTACT+TGG | + | chr4.2:34629462-34629481 | None:intergenic | 40.0% | |
| ACCTAGATGAGAACCAATCT+TGG | + | chr4.2:34628564-34628583 | None:intergenic | 40.0% | |
| ACTGCTAAGTTAAGCTGGTT+TGG | + | chr4.2:34628772-34628791 | None:intergenic | 40.0% | |
| AGATACAAGGGCCAAGTTAT+TGG | - | chr4.2:34628820-34628839 | MS.gene90963:intron | 40.0% | |
| ATGTATGTCATCATACTCGC+AGG | - | chr4.2:34626022-34626041 | MS.gene90963:CDS | 40.0% | |
| ATTAACATGGCATGCAGGAA+CGG | - | chr4.2:34628401-34628420 | MS.gene90963:CDS | 40.0% | |
| ATTACAATACCTTGAACCCC+TGG | + | chr4.2:34629669-34629688 | None:intergenic | 40.0% | |
| CAACATCCCAACCAATAACT+TGG | + | chr4.2:34628834-34628853 | None:intergenic | 40.0% | |
| CATGAAAAAGGGACAACTCA+AGG | + | chr4.2:34629839-34629858 | None:intergenic | 40.0% | |
| CCAAAAGATTCACCTCCAAA+AGG | - | chr4.2:34627733-34627752 | MS.gene90963:CDS | 40.0% | |
| CTAGCTGATTGCAAGGAATT+CGG | - | chr4.2:34629499-34629518 | MS.gene90963:intron | 40.0% | |
| GAGGATTTGAGAGTCACATA+CGG | - | chr4.2:34627476-34627495 | MS.gene90963:CDS | 40.0% | |
| GCACTTCCAAATGGAAACTT+TGG | + | chr4.2:34628508-34628527 | None:intergenic | 40.0% | |
| GCTTGGTTACAAGTGAGTAA+TGG | - | chr4.2:34627903-34627922 | MS.gene90963:intron | 40.0% | |
| GGTTTCATAGCAGATACATC+AGG | - | chr4.2:34628023-34628042 | MS.gene90963:CDS | 40.0% | |
| GTATTGTAATGTGGACAGCA+TGG | - | chr4.2:34629679-34629698 | MS.gene90963:intron | 40.0% | |
| TAATGCTAACTAGTGCCTCT+TGG | + | chr4.2:34627313-34627332 | None:intergenic | 40.0% | |
| TACACAAATGAATACGCACC+AGG | - | chr4.2:34628619-34628638 | MS.gene90963:intron | 40.0% | |
| TACAGGGATGGACATCATTT+GGG | - | chr4.2:34627627-34627646 | MS.gene90963:intron | 40.0% | |
| TAGCTGATTGCAAGGAATTC+GGG | - | chr4.2:34629500-34629519 | MS.gene90963:intron | 40.0% | |
| TATGACCGTCCAAGTAAGAT+AGG | - | chr4.2:34629450-34629469 | MS.gene90963:intron | 40.0% | |
| TCAATGGAAGCTCTCATGTA+AGG | + | chr4.2:34629117-34629136 | None:intergenic | 40.0% | |
| TCTGTTGTGGGAAGATACAA+GGG | - | chr4.2:34628808-34628827 | MS.gene90963:intron | 40.0% | |
| TGGAGGTAAAATCCTGGTAA+AGG | - | chr4.2:34626407-34626426 | MS.gene90963:intron | 40.0% | |
| TGTTGCAAGCCAATCTAATC+AGG | - | chr4.2:34629182-34629201 | MS.gene90963:intron | 40.0% | |
| TTACAATACCTTGAACCCCT+GGG | + | chr4.2:34629668-34629687 | None:intergenic | 40.0% | |
| TTCTGTTGTGGGAAGATACA+AGG | - | chr4.2:34628807-34628826 | MS.gene90963:intron | 40.0% | |
| TTGTCAACAACATCACCTGT+TGG | + | chr4.2:34629759-34629778 | None:intergenic | 40.0% | |
| TTTGGACTGCTAAGTTAAGC+TGG | + | chr4.2:34628777-34628796 | None:intergenic | 40.0% | |
| ! | ACCAAGATTGGTTCTCATCT+AGG | - | chr4.2:34628560-34628579 | MS.gene90963:CDS | 40.0% |
| ! | CTGCTAAGTTAAGCTGGTTT+GGG | + | chr4.2:34628771-34628790 | None:intergenic | 40.0% |
| ! | TCATGTAAGGCAAGTTGAGA+GGG | + | chr4.2:34629104-34629123 | None:intergenic | 40.0% |
| ! | TTCAGCCAAAGCATTTAACC+AGG | - | chr4.2:34628906-34628925 | MS.gene90963:intron | 40.0% |
| !! | AGAAGCAGTAAGGGTATCAA+TGG | + | chr4.2:34629133-34629152 | None:intergenic | 40.0% |
| !! | CCTTTTGGAGGTGAATCTTT+TGG | + | chr4.2:34627736-34627755 | None:intergenic | 40.0% |
| !! | CTTGAGTTGTCCCTTTTTCA+TGG | - | chr4.2:34629837-34629856 | MS.gene90963:intron | 40.0% |
| !! | GGGTTCAAGGTATTGTAATG+TGG | - | chr4.2:34629670-34629689 | MS.gene90963:intron | 40.0% |
| !! | TAAATGATGGACTACAGGGA+TGG | - | chr4.2:34627615-34627634 | MS.gene90963:intron | 40.0% |
| !! | TGCTAAGTTAAGCTGGTTTG+GGG | + | chr4.2:34628770-34628789 | None:intergenic | 40.0% |
| ACAACTCAAGGAGTCCATCT+TGG | + | chr4.2:34629827-34629846 | None:intergenic | 45.0% | |
| ACAAGGGCCAAGTTATTGGT+TGG | - | chr4.2:34628824-34628843 | MS.gene90963:intron | 45.0% | |
| ACAGGGATGGACATCATTTG+GGG | - | chr4.2:34627628-34627647 | MS.gene90963:intron | 45.0% | |
| ACTGCAGCATTTGATCAGCT+TGG | + | chr4.2:34628660-34628679 | None:intergenic | 45.0% | |
| AGAACCAATCTTGGTACGCA+CGG | + | chr4.2:34628555-34628574 | None:intergenic | 45.0% | |
| CACATCTTATAGCAACCCTG+CGG | + | chr4.2:34629708-34629727 | None:intergenic | 45.0% | |
| CATTGTACTGAGGCTTCTGT+GGG | + | chr4.2:34627571-34627590 | None:intergenic | 45.0% | |
| CTACAGGGATGGACATCATT+TGG | - | chr4.2:34627626-34627645 | MS.gene90963:intron | 45.0% | |
| CTCGCTCACAACAAGATTTC+AGG | + | chr4.2:34629322-34629341 | None:intergenic | 45.0% | |
| CTGCTTCTCGTTTGCCAATA+TGG | - | chr4.2:34629145-34629164 | MS.gene90963:intron | 45.0% | |
| CTTGGTTGACTACCTTTACC+AGG | + | chr4.2:34626422-34626441 | None:intergenic | 45.0% | |
| GTAATCTCTGCTCGAGAACT+TGG | + | chr4.2:34626440-34626459 | None:intergenic | 45.0% | |
| GTCGTCCTATCTTACTTGGA+CGG | + | chr4.2:34629458-34629477 | None:intergenic | 45.0% | |
| TGGCAAACGAGAAGCAGTAA+GGG | + | chr4.2:34629142-34629161 | None:intergenic | 45.0% | |
| TTAGGGACAACAGACCAAGA+TGG | - | chr4.2:34629810-34629829 | MS.gene90963:intron | 45.0% | |
| TTGGCAAACGAGAAGCAGTA+AGG | + | chr4.2:34629143-34629162 | None:intergenic | 45.0% | |
| ! | CAAGGGCCAAGTTATTGGTT+GGG | - | chr4.2:34628825-34628844 | MS.gene90963:intron | 45.0% |
| ! | CCTAGAGCGTTTGATCTTGA+CGG | - | chr4.2:34629368-34629387 | MS.gene90963:intron | 45.0% |
| ! | CGCTTTTGAATTGTGCAGCT+TGG | - | chr4.2:34627886-34627905 | MS.gene90963:intron | 45.0% |
| ! | CTCATGTAAGGCAAGTTGAG+AGG | + | chr4.2:34629105-34629124 | None:intergenic | 45.0% |
| ! | GGGGGAAAGCAGAAGTTTTA+GGG | - | chr4.2:34629793-34629812 | MS.gene90963:intron | 45.0% |
| ! | TGGGGGAAAGCAGAAGTTTT+AGG | - | chr4.2:34629792-34629811 | MS.gene90963:intron | 45.0% |
| ! | TGTTGGTCTATGCTTAAGGG+TGG | - | chr4.2:34628002-34628021 | MS.gene90963:CDS | 45.0% |
| !! | ATATTTAAAAAAATAAAAGT+CGG | - | chr4.2:34626963-34626982 | MS.gene90963:CDS | 5.0% |
| !!! | AATTGAATAAAATAAATTTT+AGG | - | chr4.2:34626734-34626753 | MS.gene90963:intron | 5.0% |
| !!! | TTATAAATTTTTAAAGTTTT+GGG | + | chr4.2:34627123-34627142 | None:intergenic | 5.0% |
| !!! | TTTATAAATTTTTAAAGTTT+TGG | + | chr4.2:34627124-34627143 | None:intergenic | 5.0% |
| ACAACCGTGCGTACCAAGAT+TGG | - | chr4.2:34628548-34628567 | MS.gene90963:CDS | 50.0% | |
| ATCAGCTAGAACTCGCAGTC+AGG | + | chr4.2:34629488-34629507 | None:intergenic | 50.0% | |
| CAGAAGCCTCAGTACAATGG+AGG | - | chr4.2:34627572-34627591 | MS.gene90963:intron | 50.0% | |
| CATGCAGGAACGGAAGAGAA+AGG | - | chr4.2:34628411-34628430 | MS.gene90963:intron | 50.0% | |
| CCACAGAAGCCTCAGTACAA+TGG | - | chr4.2:34627569-34627588 | MS.gene90963:intron | 50.0% | |
| CCATTGTACTGAGGCTTCTG+TGG | + | chr4.2:34627572-34627591 | None:intergenic | 50.0% | |
| CCGTCAAGATCAAACGCTCT+AGG | + | chr4.2:34629371-34629390 | None:intergenic | 50.0% | |
| CTACGAGCAAGCTCTTAGAG+AGG | - | chr4.2:34629632-34629651 | MS.gene90963:intron | 50.0% | |
| GACTCCAAGCCAATTCCAAG+CGG | + | chr4.2:34629066-34629085 | None:intergenic | 50.0% | |
| GGAAGCTGAGCTCTACTTTG+AGG | - | chr4.2:34628046-34628065 | MS.gene90963:CDS | 50.0% | |
| GTCCAAGCACTAGACGAACA+AGG | - | chr4.2:34628439-34628458 | MS.gene90963:intron | 50.0% | |
| GTCCTTGTTCGTCTAGTGCT+TGG | + | chr4.2:34628444-34628463 | None:intergenic | 50.0% | |
| GTGAATAGGCAATTGCCGCT+TGG | - | chr4.2:34629048-34629067 | MS.gene90963:intron | 50.0% | |
| ! | AGGCAATTGCCGCTTGGAAT+TGG | - | chr4.2:34629054-34629073 | MS.gene90963:intron | 50.0% |
| ! | ATTGCCGCTTGGAATTGGCT+TGG | - | chr4.2:34629059-34629078 | MS.gene90963:intron | 50.0% |
| ! | GCGAGTTCTAGCTGATTGCA+AGG | - | chr4.2:34629492-34629511 | MS.gene90963:intron | 50.0% |
| ! | GTAAGGCAAGTTGAGAGGGA+GGG | + | chr4.2:34629100-34629119 | None:intergenic | 50.0% |
| ! | TGTAAGGCAAGTTGAGAGGG+AGG | + | chr4.2:34629101-34629120 | None:intergenic | 50.0% |
| ! | TGTGGGATTGTCAAGCACTG+AGG | + | chr4.2:34627554-34627573 | None:intergenic | 50.0% |
| ! | GCAAGTTGAGAGGGAGGGAA+GGG | + | chr4.2:34629095-34629114 | None:intergenic | 55.0% |
| CACTCTCACCCAGGGGTTCA+AGG | - | chr4.2:34629657-34629676 | MS.gene90963:intron | 60.0% | |
| TGGACAGCATGGACACCGCA+GGG | - | chr4.2:34629690-34629709 | MS.gene90963:intron | 60.0% | |
| ! | AGAGAGGCACACTCTCACCC+AGG | - | chr4.2:34629648-34629667 | MS.gene90963:intron | 60.0% |
| ! | AGAGGCACACTCTCACCCAG+GGG | - | chr4.2:34629650-34629669 | MS.gene90963:intron | 60.0% |
| ! | GAGAGGCACACTCTCACCCA+GGG | - | chr4.2:34629649-34629668 | MS.gene90963:intron | 60.0% |
| ! | GGCAAGTTGAGAGGGAGGGA+AGG | + | chr4.2:34629096-34629115 | None:intergenic | 60.0% |
| GTGGACAGCATGGACACCGC+AGG | - | chr4.2:34629689-34629708 | MS.gene90963:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 34626004 | 34629977 | 34626004 | ID=MS.gene90963 |
| chr4.2 | mRNA | 34626004 | 34629977 | 34626004 | ID=MS.gene90963.t1;Parent=MS.gene90963 |
| chr4.2 | exon | 34629938 | 34629977 | 34629938 | ID=MS.gene90963.t1.exon1;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34629938 | 34629977 | 34629938 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34628540 | 34628586 | 34628540 | ID=MS.gene90963.t1.exon2;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34628540 | 34628586 | 34628540 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34628256 | 34628424 | 34628256 | ID=MS.gene90963.t1.exon3;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34628256 | 34628424 | 34628256 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34627914 | 34628077 | 34627914 | ID=MS.gene90963.t1.exon4;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34627914 | 34628077 | 34627914 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34627674 | 34627772 | 34627674 | ID=MS.gene90963.t1.exon5;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34627674 | 34627772 | 34627674 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34626778 | 34627563 | 34626778 | ID=MS.gene90963.t1.exon6;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34626778 | 34627563 | 34626778 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| chr4.2 | exon | 34626004 | 34626357 | 34626004 | ID=MS.gene90963.t1.exon7;Parent=MS.gene90963.t1 |
| chr4.2 | CDS | 34626004 | 34626357 | 34626004 | ID=cds.MS.gene90963.t1;Parent=MS.gene90963.t1 |
| Gene Sequence |
| Protein sequence |
