Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52090.t1 | XP_013456504.1 | 96.8 | 571 | 16 | 2 | 1 | 569 | 1 | 571 | 0.00E+00 | 1132.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52090.t1 | A0A1P8B8F8 | 37.2 | 565 | 324 | 6 | 3 | 556 | 12 | 556 | 4.7e-108 | 393.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52090.t1 | A0A072UXE0 | 96.8 | 571 | 16 | 2 | 1 | 569 | 1 | 571 | 0.0e+00 | 1132.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52090 | MS.gene68149 | PPI |
| MS.gene52090 | MS.gene75410 | PPI |
| MS.gene52090 | MS.gene53185 | PPI |
| MS.gene52090 | MS.gene90963 | PPI |
| MS.gene054660 | MS.gene52090 | PPI |
| MS.gene044959 | MS.gene52090 | PPI |
| MS.gene52090 | MS.gene057723 | PPI |
| MS.gene062453 | MS.gene52090 | PPI |
| MS.gene52090 | MS.gene59021 | PPI |
| MS.gene74061 | MS.gene52090 | PPI |
| MS.gene52090 | MS.gene003507 | PPI |
| MS.gene52090 | MS.gene032541 | PPI |
| MS.gene52090 | MS.gene62099 | PPI |
| MS.gene014213 | MS.gene52090 | PPI |
| MS.gene52090 | MS.gene68749 | PPI |
| MS.gene52090 | MS.gene044959 | PPI |
| MS.gene99993 | MS.gene52090 | PPI |
| MS.gene52090 | MS.gene063101 | PPI |
| MS.gene52090 | MS.gene74061 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52090.t1 | MTR_4g074070 | 96.848 | 571 | 16 | 2 | 1 | 569 | 1 | 571 | 0.0 | 1147 |
| MS.gene52090.t1 | MTR_7g024420 | 76.140 | 570 | 135 | 1 | 1 | 569 | 1 | 570 | 0.0 | 916 |
| MS.gene52090.t1 | MTR_5g049180 | 71.754 | 570 | 160 | 1 | 1 | 569 | 1 | 570 | 0.0 | 884 |
| MS.gene52090.t1 | MTR_1g106200 | 47.715 | 547 | 281 | 3 | 3 | 544 | 12 | 558 | 0.0 | 542 |
| MS.gene52090.t1 | MTR_1g106910 | 48.182 | 550 | 277 | 5 | 4 | 546 | 10 | 558 | 0.0 | 529 |
| MS.gene52090.t1 | MTR_1g106790 | 47.300 | 537 | 277 | 4 | 9 | 540 | 18 | 553 | 1.00e-177 | 514 |
| MS.gene52090.t1 | MTR_1g106770 | 47.601 | 521 | 267 | 4 | 29 | 544 | 4 | 523 | 6.85e-175 | 506 |
| MS.gene52090.t1 | MTR_1g106200 | 43.590 | 546 | 270 | 4 | 4 | 544 | 19 | 531 | 1.04e-162 | 475 |
| MS.gene52090.t1 | MTR_3g117800 | 40.481 | 541 | 288 | 12 | 9 | 542 | 1 | 514 | 1.62e-133 | 400 |
| MS.gene52090.t1 | MTR_3g117800 | 44.124 | 451 | 242 | 8 | 99 | 542 | 16 | 463 | 5.07e-130 | 389 |
| MS.gene52090.t1 | MTR_3g117800 | 44.965 | 427 | 227 | 6 | 121 | 542 | 10 | 433 | 9.81e-128 | 382 |
| MS.gene52090.t1 | MTR_1g017020 | 30.162 | 557 | 342 | 15 | 35 | 558 | 353 | 895 | 7.62e-63 | 222 |
| MS.gene52090.t1 | MTR_3g103610 | 31.965 | 463 | 281 | 12 | 43 | 478 | 200 | 655 | 4.22e-61 | 215 |
| MS.gene52090.t1 | MTR_4g121520 | 43.069 | 202 | 89 | 1 | 305 | 506 | 223 | 398 | 1.16e-41 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52090.t1 | AT4G33840 | 55.556 | 558 | 241 | 5 | 16 | 568 | 19 | 574 | 0.0 | 657 |
| MS.gene52090.t1 | AT4G33860 | 56.827 | 542 | 227 | 4 | 16 | 552 | 19 | 558 | 0.0 | 652 |
| MS.gene52090.t1 | AT4G33830 | 56.429 | 560 | 235 | 7 | 9 | 563 | 13 | 568 | 0.0 | 644 |
| MS.gene52090.t1 | AT4G33810 | 37.037 | 567 | 326 | 6 | 1 | 556 | 10 | 556 | 1.06e-131 | 396 |
| MS.gene52090.t1 | AT4G33810 | 37.037 | 567 | 326 | 6 | 1 | 556 | 10 | 556 | 1.06e-131 | 396 |
| MS.gene52090.t1 | AT4G33810 | 37.037 | 567 | 326 | 6 | 1 | 556 | 10 | 556 | 1.06e-131 | 396 |
| MS.gene52090.t1 | AT4G38650 | 39.139 | 534 | 286 | 11 | 22 | 542 | 34 | 541 | 5.76e-130 | 392 |
| MS.gene52090.t1 | AT4G33810 | 41.127 | 479 | 273 | 4 | 87 | 556 | 38 | 516 | 2.32e-129 | 389 |
| MS.gene52090.t1 | AT4G33810 | 41.127 | 479 | 273 | 4 | 87 | 556 | 38 | 516 | 2.32e-129 | 389 |
| MS.gene52090.t1 | AT4G33820 | 35.813 | 578 | 338 | 8 | 1 | 565 | 10 | 567 | 1.72e-126 | 383 |
| MS.gene52090.t1 | AT2G14690 | 36.491 | 570 | 315 | 10 | 18 | 569 | 28 | 568 | 1.43e-120 | 368 |
| MS.gene52090.t1 | AT4G38300 | 40.149 | 269 | 149 | 3 | 192 | 460 | 12 | 268 | 1.05e-66 | 218 |
| MS.gene52090.t1 | AT1G58370 | 29.390 | 541 | 329 | 16 | 35 | 537 | 362 | 887 | 8.76e-63 | 222 |
| MS.gene52090.t1 | AT1G58370 | 29.390 | 541 | 329 | 16 | 35 | 537 | 390 | 915 | 9.22e-63 | 223 |
| MS.gene52090.t1 | AT1G10050 | 28.598 | 528 | 336 | 15 | 43 | 537 | 518 | 1037 | 5.41e-58 | 209 |
| MS.gene52090.t1 | AT1G10050 | 28.598 | 528 | 336 | 15 | 43 | 537 | 518 | 1037 | 5.41e-58 | 209 |
| MS.gene52090.t1 | AT1G10050 | 28.598 | 528 | 336 | 15 | 43 | 537 | 550 | 1069 | 7.97e-58 | 209 |
| MS.gene52090.t1 | AT4G08160 | 28.108 | 555 | 334 | 17 | 35 | 541 | 190 | 727 | 4.14e-57 | 204 |
| MS.gene52090.t1 | AT4G08160 | 29.474 | 475 | 290 | 13 | 35 | 471 | 190 | 657 | 3.29e-53 | 192 |
Find 126 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGTCCATCATTTATTTC+TGG | 0.060365 | 4.1:+29804341 | None:intergenic |
| ATAATACTTATGTGGAAATT+TGG | 0.168155 | 4.1:-29803756 | MS.gene52090:CDS |
| GAGAGTGAATAAACCCATTT+TGG | 0.219642 | 4.1:+29803224 | None:intergenic |
| ATCCTAAGTATCAACCAAAA+TGG | 0.221542 | 4.1:-29803238 | MS.gene52090:CDS |
| CTGCTTCTCGTTTGCCAATA+TGG | 0.254889 | 4.1:-29802824 | MS.gene52090:CDS |
| GTTATACTCATTAATAAATA+AGG | 0.255913 | 4.1:+29803016 | None:intergenic |
| CTGCTAAGTTAAGTTGGTTT+GGG | 0.279949 | 4.1:+29803201 | None:intergenic |
| GTAGTCCATCATTTATTTCT+GGG | 0.282535 | 4.1:+29804342 | None:intergenic |
| GGGATGTATTATACTTTATC+TGG | 0.299029 | 4.1:-29804194 | MS.gene52090:intron |
| AGATACAAGGGCCAAGTTAT+TGG | 0.302678 | 4.1:-29803149 | MS.gene52090:CDS |
| CTCCATTTCTCATTCTTTGA+AGG | 0.334895 | 4.1:-29803104 | MS.gene52090:CDS |
| TAATTGTTGGTCTATGCTTA+AGG | 0.340081 | 4.1:-29803951 | MS.gene52090:CDS |
| AGGCAATTGCCGCTTGGAAT+TGG | 0.344122 | 4.1:-29802915 | MS.gene52090:CDS |
| TACAGGGATGGACATCATTT+GGG | 0.347819 | 4.1:-29804322 | MS.gene52090:CDS |
| AAGTATAATACATCCCCTTT+TGG | 0.366965 | 4.1:+29804201 | None:intergenic |
| ATGAACCTGGTTAAATGCTT+TGG | 0.368490 | 4.1:+29803058 | None:intergenic |
| ATATACTCGCATTTGGTAAA+GGG | 0.369495 | 4.1:+29803504 | None:intergenic |
| TCTAATTCTGTAATCCATAT+TGG | 0.372646 | 4.1:+29802810 | None:intergenic |
| ACCAAGATTGGTTCTCATCT+AGG | 0.377645 | 4.1:-29803409 | MS.gene52090:CDS |
| TGTTGCAAGCCAACCTAATC+AGG | 0.378512 | 4.1:-29802787 | MS.gene52090:intron |
| AATAAACCAAAGTTTCCATT+TGG | 0.380065 | 4.1:-29803470 | MS.gene52090:CDS |
| GTTATTGACATTACCTGATT+AGG | 0.381191 | 4.1:+29802774 | None:intergenic |
| TTCCTTGTTCGTCTAGTGCT+TGG | 0.384450 | 4.1:+29803528 | None:intergenic |
| AATTGTTGGTCTATGCTTAA+GGG | 0.388951 | 4.1:-29803950 | MS.gene52090:CDS |
| ACTGCTAAGTTAAGTTGGTT+TGG | 0.390321 | 4.1:+29803200 | None:intergenic |
| GCAAGTTGAGAGGGAGGGAA+GGG | 0.410237 | 4.1:+29802877 | None:intergenic |
| TCATTCTTTGAAGGTAAACT+TGG | 0.410337 | 4.1:-29803095 | MS.gene52090:CDS |
| CTACAGGGATGGACATCATT+TGG | 0.410813 | 4.1:-29804323 | MS.gene52090:CDS |
| GCACTTCCAAATGGAAACTT+TGG | 0.412889 | 4.1:+29803464 | None:intergenic |
| TACCTTCAAAGAATGAGAAA+TGG | 0.422772 | 4.1:+29803102 | None:intergenic |
| TATATACTCGCATTTGGTAA+AGG | 0.423694 | 4.1:+29803503 | None:intergenic |
| CACTCTCACCCAGGGGTTCA+AGG | 0.423710 | 4.1:-29802294 | MS.gene52090:CDS |
| GGCAAGTTGAGAGGGAGGGA+AGG | 0.424561 | 4.1:+29802876 | None:intergenic |
| ACAACCGTGCGTACCAAGAT+TGG | 0.432597 | 4.1:-29803421 | MS.gene52090:CDS |
| AGAAATAAATGATGGACTAC+AGG | 0.433056 | 4.1:-29804339 | MS.gene52090:CDS |
| CTATTTATTGCACTTCCAAA+TGG | 0.433671 | 4.1:+29803455 | None:intergenic |
| GTAATATATATACTCGCATT+TGG | 0.435045 | 4.1:+29803497 | None:intergenic |
| TTCCATTGTTGTTCTGTGAA+TGG | 0.442187 | 4.1:+29803712 | None:intergenic |
| AACAAATTCGAAGTGTGAAT+AGG | 0.444598 | 4.1:-29802935 | MS.gene52090:CDS |
| GCGGTTGTTAAAACAAATGA+AGG | 0.447006 | 4.1:-29804007 | MS.gene52090:CDS |
| TTTGGACTGCTAAGTTAAGT+TGG | 0.448271 | 4.1:+29803195 | None:intergenic |
| CAACATCCCAACCAATAACT+TGG | 0.449449 | 4.1:+29803138 | None:intergenic |
| TTGTTCTGTGAATGGTTGTA+AGG | 0.456277 | 4.1:+29803720 | None:intergenic |
| TGGAAATAGTTATCTTTCCC+TGG | 0.461702 | 4.1:+29803332 | None:intergenic |
| CATTTGAAAATGAAATGAAA+TGG | 0.462838 | 4.1:-29803373 | MS.gene52090:CDS |
| ATACAACATAGAGAATCATT+AGG | 0.469427 | 4.1:-29804290 | MS.gene52090:CDS |
| TCCTAAGTATCAACCAAAAT+GGG | 0.472270 | 4.1:-29803237 | MS.gene52090:CDS |
| CAAAAGATTCACCTCCAAAA+GGG | 0.472620 | 4.1:-29804215 | MS.gene52090:CDS |
| CAAGGGCCAAGTTATTGGTT+GGG | 0.475373 | 4.1:-29803144 | MS.gene52090:CDS |
| TTCTGTTGTGGGAAGATACA+AGG | 0.475645 | 4.1:-29803162 | MS.gene52090:CDS |
| CCAAAAGATTCACCTCCAAA+AGG | 0.479483 | 4.1:-29804216 | MS.gene52090:CDS |
| CCATTGTACTGAGGCTTCTG+TGG | 0.482877 | 4.1:+29804380 | None:intergenic |
| AGAAGCAGTAAGGGTATCAA+TGG | 0.488249 | 4.1:+29802839 | None:intergenic |
| ATTGCCGCTTGGAATTGGCT+TGG | 0.488568 | 4.1:-29802910 | MS.gene52090:CDS |
| TCAAGATCAAAGCATTGAAA+AGG | 0.491272 | 4.1:-29803683 | MS.gene52090:intron |
| ACAACTCAAGGAGTCCATCT+TGG | 0.491918 | 4.1:+29802127 | None:intergenic |
| GGAAGCTGAGCTATACTTTG+AGG | 0.492380 | 4.1:-29803903 | MS.gene52090:intron |
| ACTGTAGCATTTGATCAGCT+TGG | 0.494016 | 4.1:+29803312 | None:intergenic |
| ATAGAGTAATTCTTCTTGCT+AGG | 0.494726 | 4.1:+29802066 | None:intergenic |
| ATTACAATACCTTGAACCCC+TGG | 0.497957 | 4.1:+29802285 | None:intergenic |
| ACAAGGGCCAAGTTATTGGT+TGG | 0.504170 | 4.1:-29803145 | MS.gene52090:CDS |
| TCACACAATATTACCGTTCG+AGG | 0.504212 | 4.1:-29803281 | MS.gene52090:CDS |
| ACCTAGATGAGAACCAATCT+TGG | 0.505709 | 4.1:+29803408 | None:intergenic |
| CATTGTACTGAGGCTTCTGT+GGG | 0.507610 | 4.1:+29804381 | None:intergenic |
| TCAATGGAAGCTCTCATGTA+AGG | 0.515536 | 4.1:+29802855 | None:intergenic |
| GGTTTCATAGCAGATACATC+AGG | 0.520938 | 4.1:-29803926 | MS.gene52090:CDS |
| AAAAGAATGAATTCTGTTGT+GGG | 0.523267 | 4.1:-29803173 | MS.gene52090:CDS |
| TTGGCAAACGAGAAGCAGTA+AGG | 0.525147 | 4.1:+29802829 | None:intergenic |
| TAGAGTAATTCTTCTTGCTA+GGG | 0.532300 | 4.1:+29802067 | None:intergenic |
| CAAAACCCAGAAATAAATGA+TGG | 0.533809 | 4.1:-29804347 | MS.gene52090:CDS |
| TTAATAAATAAGGTGGCTTG+TGG | 0.537468 | 4.1:+29803026 | None:intergenic |
| GTGGACAGCATGGACACCGC+AGG | 0.544659 | 4.1:-29802262 | MS.gene52090:CDS |
| TAATGAGTATAACACAATTG+AGG | 0.545937 | 4.1:-29803006 | MS.gene52090:CDS |
| TTGACATTACCTGATTAGGT+TGG | 0.549035 | 4.1:+29802778 | None:intergenic |
| GTAGAGTAATAATACTTATG+TGG | 0.553769 | 4.1:-29803764 | MS.gene52090:intron |
| TGACAAACTAATATCTGAGT+GGG | 0.553941 | 4.1:-29802178 | MS.gene52090:CDS |
| GTGAATAGGCAATTGCCGCT+TGG | 0.559881 | 4.1:-29802921 | MS.gene52090:CDS |
| TGTTGGTCTATGCTTAAGGG+TGG | 0.565512 | 4.1:-29803947 | MS.gene52090:CDS |
| ATCATTAGGTAACAAATATG+TGG | 0.568281 | 4.1:-29804276 | MS.gene52090:CDS |
| TACACAAATGAATACGCACC+AGG | 0.568567 | 4.1:-29803350 | MS.gene52090:CDS |
| ATGTATGTCATCATACTCGC+AGG | 0.570894 | 4.1:-29805918 | MS.gene52090:intron |
| GTGGATCAATATTATGAACC+TGG | 0.571439 | 4.1:+29803045 | None:intergenic |
| AGAGAGGCACACTCTCACCC+AGG | 0.571476 | 4.1:-29802303 | MS.gene52090:CDS |
| CTCATGTAAGGCAAGTTGAG+AGG | 0.574507 | 4.1:+29802867 | None:intergenic |
| ACAATTGAGGATAGTAGAGA+TGG | 0.575559 | 4.1:-29802993 | MS.gene52090:CDS |
| ATACTCATTAATAAATAAGG+TGG | 0.578304 | 4.1:+29803019 | None:intergenic |
| TGCTAAGTTAAGTTGGTTTG+GGG | 0.579956 | 4.1:+29803202 | None:intergenic |
| AAATATATTGTGTCCTCGAA+CGG | 0.581157 | 4.1:+29803268 | None:intergenic |
| TTCAGCCAAAGCATTTAACC+AGG | 0.582794 | 4.1:-29803063 | MS.gene52090:CDS |
| CATGCAGGAACGGAAGAGAA+AGG | 0.585673 | 4.1:-29803558 | MS.gene52090:intron |
| TCATGTAAGGCAAGTTGAGA+GGG | 0.593623 | 4.1:+29802868 | None:intergenic |
| CCACAGAAGCCTCAGTACAA+TGG | 0.596512 | 4.1:-29804380 | MS.gene52090:CDS |
| GCTTGGTTACAAGTGAGTAA+TGG | 0.599139 | 4.1:-29804046 | MS.gene52090:CDS |
| AACCATTCACAGAACAACAA+TGG | 0.601388 | 4.1:-29803714 | MS.gene52090:CDS |
| TGGCAAACGAGAAGCAGTAA+GGG | 0.602105 | 4.1:+29802830 | None:intergenic |
| CATAGACCAACAATTAGACT+CGG | 0.602186 | 4.1:+29803958 | None:intergenic |
| GTATTGTAATGTGGACAGCA+TGG | 0.607804 | 4.1:-29802272 | MS.gene52090:CDS |
| TTACAATACCTTGAACCCCT+GGG | 0.613681 | 4.1:+29802286 | None:intergenic |
| TAAATGATGGACTACAGGGA+TGG | 0.614495 | 4.1:-29804334 | MS.gene52090:CDS |
| GTTTCATAGCAGATACATCA+GGG | 0.616391 | 4.1:-29803925 | MS.gene52090:CDS |
| TTAGGGACAACAGACCAAGA+TGG | 0.617849 | 4.1:-29802141 | MS.gene52090:CDS |
| AAAAGATTCACCTCCAAAAG+GGG | 0.619313 | 4.1:-29804214 | MS.gene52090:CDS |
| GAAATAAATGATGGACTACA+GGG | 0.623693 | 4.1:-29804338 | MS.gene52090:CDS |
| GACAAACTAATATCTGAGTG+GGG | 0.623791 | 4.1:-29802177 | MS.gene52090:CDS |
| GAGAGGCACACTCTCACCCA+GGG | 0.625535 | 4.1:-29802302 | MS.gene52090:CDS |
| TGGAAATGTTCCTGTAACAG+CGG | 0.627807 | 4.1:-29804026 | MS.gene52090:CDS |
| TGTAAGGCAAGTTGAGAGGG+AGG | 0.629805 | 4.1:+29802871 | None:intergenic |
| ATTATTCCTCCATTGTACTG+AGG | 0.630818 | 4.1:+29804371 | None:intergenic |
| AGAACCAATCTTGGTACGCA+CGG | 0.635919 | 4.1:+29803417 | None:intergenic |
| GTATGATGACATACATCAGA+AGG | 0.636716 | 4.1:+29805925 | None:intergenic |
| GGGTTCAAGGTATTGTAATG+TGG | 0.638497 | 4.1:-29802281 | MS.gene52090:CDS |
| TTGTCAACAACATCACCTGT+TGG | 0.643740 | 4.1:+29802195 | None:intergenic |
| ACAAACTAATATCTGAGTGG+GGG | 0.644964 | 4.1:-29802176 | MS.gene52090:CDS |
| TGGACAGCATGGACACCGCA+GGG | 0.648221 | 4.1:-29802261 | MS.gene52090:CDS |
| GTAAGGCAAGTTGAGAGGGA+GGG | 0.653299 | 4.1:+29802872 | None:intergenic |
| CAGAAGCCTCAGTACAATGG+AGG | 0.654580 | 4.1:-29804377 | MS.gene52090:CDS |
| GTCCAAGCACTAGACGAACA+AGG | 0.656484 | 4.1:-29803530 | MS.gene52090:CDS |
| TTGACAAACTAATATCTGAG+TGG | 0.663292 | 4.1:-29802179 | MS.gene52090:CDS |
| GACTCCAAGCCAATTCCAAG+CGG | 0.675630 | 4.1:+29802906 | None:intergenic |
| TCTGTTGTGGGAAGATACAA+GGG | 0.678876 | 4.1:-29803161 | MS.gene52090:CDS |
| ACAGGGATGGACATCATTTG+GGG | 0.680750 | 4.1:-29804321 | MS.gene52090:CDS |
| CTTCGAGCAAGCTCTTAGAG+AGG | 0.684078 | 4.1:-29802319 | MS.gene52090:CDS |
| ACACAAATGAATACGCACCA+GGG | 0.690338 | 4.1:-29803349 | MS.gene52090:CDS |
| TTTCATAGCAGATACATCAG+GGG | 0.754520 | 4.1:-29803924 | MS.gene52090:CDS |
| AGAGGCACACTCTCACCCAG+GGG | 0.761814 | 4.1:-29802301 | MS.gene52090:CDS |
| CACATCTTATAGCAACCCTG+CGG | 0.776758 | 4.1:+29802246 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAGAAAAACAAATAT+TGG | + | chr4.1:29805185-29805204 | None:intergenic | 10.0% |
| !! | ATATATTAGATAACTATAAA+TGG | - | chr4.1:29802182-29802201 | MS.gene52090:CDS | 10.0% |
| !! | ATGTTAATTAAAATTAAACT+TGG | + | chr4.1:29804352-29804371 | None:intergenic | 10.0% |
| !! | TAAAATTAACAATTGAAAAT+GGG | + | chr4.1:29802652-29802671 | None:intergenic | 10.0% |
| !! | TATTATTTGAATGATAAATA+AGG | - | chr4.1:29804089-29804108 | MS.gene52090:intron | 10.0% |
| !! | TATTTAAAAAAATAAAAGTC+GGG | - | chr4.1:29802942-29802961 | MS.gene52090:CDS | 10.0% |
| !! | TTAAAATTAACAATTGAAAA+TGG | + | chr4.1:29802653-29802672 | None:intergenic | 10.0% |
| !!! | AAGTTTAATTTTAATTAACA+TGG | - | chr4.1:29804351-29804370 | MS.gene52090:CDS | 10.0% |
| !!! | ATTTATTTTATTCAATTATG+TGG | + | chr4.1:29802709-29802728 | None:intergenic | 10.0% |
| !!! | TAATTTGAAATTTCAAATTA+TGG | + | chr4.1:29803033-29803014 | None:intergenic | 10.0% |
| !!! | TCTTAATATATTTTTTTGTT+TGG | + | chr4.1:29803168-29803187 | None:intergenic | 10.0% |
| !!! | TCTTTTAAAAATATCATTTT+TGG | - | chr4.1:29803045-29803064 | MS.gene52090:CDS | 10.0% |
| !!! | TTGATAACTATAAAATTTAA+AGG | - | chr4.1:29804314-29804333 | MS.gene52090:CDS | 10.0% |
| !!! | TTTATTTTATTCAATTATGT+GGG | + | chr4.1:29802708-29802727 | None:intergenic | 10.0% |
| !! | GAGTAAAAAAAAAATTGATT+TGG | - | chr4.1:29802377-29802396 | MS.gene52090:intron | 15.0% |
| !! | GTTATACTCATTAATAAATA+AGG | + | chr4.1:29804919-29804938 | None:intergenic | 15.0% |
| !!! | ATTCTTTGATATTGTTTTAA+GGG | + | chr4.1:29803314-29803333 | None:intergenic | 15.0% |
| !!! | TAAAAAAAAAATTGATTTGG+AGG | - | chr4.1:29802380-29802399 | MS.gene52090:intron | 15.0% |
| !!! | TATTCTTTGATATTGTTTTA+AGG | + | chr4.1:29803315-29803334 | None:intergenic | 15.0% |
| !! | AATTTCAAAAATTTACCAAC+AGG | - | chr4.1:29805722-29805741 | MS.gene52090:intron | 20.0% |
| !! | ATAATACTTATGTGGAAATT+TGG | - | chr4.1:29804176-29804195 | MS.gene52090:intron | 20.0% |
| !! | ATACTCATTAATAAATAAGG+TGG | + | chr4.1:29804916-29804935 | None:intergenic | 20.0% |
| !! | ATTTCAAATTATGGAAAATG+TGG | + | chr4.1:29803005-29803024 | None:intergenic | 20.0% |
| !! | CATTGTTTGAATGATAAATT+TGG | - | chr4.1:29802849-29802868 | MS.gene52090:CDS | 20.0% |
| !! | CATTTGAAAATGAAATGAAA+TGG | - | chr4.1:29804559-29804578 | MS.gene52090:CDS | 20.0% |
| !! | TAATACTAGATTGTCTAATA+TGG | + | chr4.1:29805502-29805521 | None:intergenic | 20.0% |
| !! | TACTCTACATGATTAAAATT+TGG | + | chr4.1:29804156-29804175 | None:intergenic | 20.0% |
| !! | TTGAAAATGGGATAATTAAA+AGG | + | chr4.1:29802640-29802659 | None:intergenic | 20.0% |
| !!! | AACATTTATTTCTGTTTTTG+AGG | - | chr4.1:29803435-29803454 | MS.gene52090:CDS | 20.0% |
| !!! | AATAATATGCACTGATTTAT+AGG | - | chr4.1:29803826-29803845 | MS.gene52090:intron | 20.0% |
| !!! | AATGAAGGATTTAAATTTTG+TGG | - | chr4.1:29803940-29803959 | MS.gene52090:CDS | 20.0% |
| !!! | AATTAGTGATCGATTAATTT+TGG | - | chr4.1:29802135-29802154 | MS.gene52090:CDS | 20.0% |
| !!! | AGTTTTTTTAGCTATGTTAT+TGG | + | chr4.1:29802490-29802509 | None:intergenic | 20.0% |
| !!! | TATCAATTGTGTTGTTTTAT+TGG | + | chr4.1:29805924-29805943 | None:intergenic | 20.0% |
| !!! | TATTTTACTCATTTATGACT+TGG | - | chr4.1:29805529-29805548 | MS.gene52090:intron | 20.0% |
| !!! | TTGGATAAACTTTAAAATGA+AGG | - | chr4.1:29802868-29802887 | MS.gene52090:CDS | 20.0% |
| ! | AAAAAGAATGAATTCTGTTG+TGG | - | chr4.1:29804758-29804777 | MS.gene52090:intron | 25.0% |
| ! | AAAAGAATGAATTCTGTTGT+GGG | - | chr4.1:29804759-29804778 | MS.gene52090:intron | 25.0% |
| ! | AATAAACCAAAGTTTCCATT+TGG | - | chr4.1:29804462-29804481 | MS.gene52090:intron | 25.0% |
| ! | AATACATTTCTCTTATAGTG+TGG | - | chr4.1:29802761-29802780 | MS.gene52090:intron | 25.0% |
| ! | AATTATATTCCCTCTAACTT+TGG | - | chr4.1:29803494-29803513 | MS.gene52090:CDS | 25.0% |
| ! | AGAAAATACATAAAGAGTGA+TGG | + | chr4.1:29802563-29802582 | None:intergenic | 25.0% |
| ! | AGGGTCTATATTAAATTTCA+AGG | - | chr4.1:29802965-29802984 | MS.gene52090:CDS | 25.0% |
| ! | AGGTAAACAACTAATTTCAT+AGG | - | chr4.1:29804269-29804288 | MS.gene52090:CDS | 25.0% |
| ! | AGTTATCAATTGTCTGAATA+TGG | + | chr4.1:29804303-29804322 | None:intergenic | 25.0% |
| ! | ATACAACATAGAGAATCATT+AGG | - | chr4.1:29803642-29803661 | MS.gene52090:intron | 25.0% |
| ! | ATACGGTTTATTACATTACA+TGG | - | chr4.1:29803471-29803490 | MS.gene52090:CDS | 25.0% |
| ! | ATCATTAGGTAACAAATATG+TGG | - | chr4.1:29803656-29803675 | MS.gene52090:intron | 25.0% |
| ! | ATTATATTCCCTCTAACTTT+GGG | - | chr4.1:29803495-29803514 | MS.gene52090:CDS | 25.0% |
| ! | CAATCAAAGCAAAATAATGT+TGG | + | chr4.1:29802324-29802343 | None:intergenic | 25.0% |
| ! | GTAATATATATACTCGCATT+TGG | + | chr4.1:29804438-29804457 | None:intergenic | 25.0% |
| ! | GTAGAGTAATAATACTTATG+TGG | - | chr4.1:29804168-29804187 | MS.gene52090:intron | 25.0% |
| ! | TAAAAAAATAAAAGTCGGGA+GGG | - | chr4.1:29802946-29802965 | MS.gene52090:CDS | 25.0% |
| ! | TAATGAGTATAACACAATTG+AGG | - | chr4.1:29804926-29804945 | MS.gene52090:intron | 25.0% |
| ! | TCTAATTCTGTAATCCATAT+TGG | + | chr4.1:29805125-29805144 | None:intergenic | 25.0% |
| ! | TTAAAAAAATAAAAGTCGGG+AGG | - | chr4.1:29802945-29802964 | MS.gene52090:CDS | 25.0% |
| ! | TTTGTAATCTCCATGAAAAA+GGG | + | chr4.1:29805831-29805850 | None:intergenic | 25.0% |
| !! | TATTTTGCTTTGATTGAAAG+TGG | - | chr4.1:29802328-29802347 | MS.gene52090:CDS | 25.0% |
| !! | TTTTGTAATCTCCATGAAAA+AGG | + | chr4.1:29805832-29805851 | None:intergenic | 25.0% |
| !!! | AGATGAAGAAAAAAAGTGTT+AGG | + | chr4.1:29803257-29803276 | None:intergenic | 25.0% |
| !!! | CAACAGAATTCATTCTTTTT+TGG | + | chr4.1:29804758-29804777 | None:intergenic | 25.0% |
| !!! | GTTTTATTGGAATCTTCTTT+TGG | + | chr4.1:29805911-29805930 | None:intergenic | 25.0% |
| !!! | TTCGAATTTGTTTGATTTTC+TGG | + | chr4.1:29804989-29805008 | None:intergenic | 25.0% |
| AAATATATTGTGTCCTCGAA+CGG | + | chr4.1:29804667-29804686 | None:intergenic | 30.0% | |
| AACAAATTCGAAGTGTGAAT+AGG | - | chr4.1:29804997-29805016 | MS.gene52090:intron | 30.0% | |
| AAGTAATACCCAAAGTTAGA+GGG | + | chr4.1:29803506-29803525 | None:intergenic | 30.0% | |
| AAGTGTTAGGATGAGATAAT+CGG | + | chr4.1:29803244-29803263 | None:intergenic | 30.0% | |
| AATTATGTGGGACTGAATTA+AGG | + | chr4.1:29802696-29802715 | None:intergenic | 30.0% | |
| ATAGAGTAATTCTTCTTGCT+AGG | + | chr4.1:29805869-29805888 | None:intergenic | 30.0% | |
| ATATACTCGCATTTGGTAAA+GGG | + | chr4.1:29804431-29804450 | None:intergenic | 30.0% | |
| ATCCTAAGTATCAACCAAAA+TGG | - | chr4.1:29804694-29804713 | MS.gene52090:intron | 30.0% | |
| CAAAACCCAGAAATAAATGA+TGG | - | chr4.1:29803585-29803604 | MS.gene52090:intron | 30.0% | |
| CATTGTGAGATTTACTTTGT+GGG | + | chr4.1:29802295-29802314 | None:intergenic | 30.0% | |
| CTATTTATTGCACTTCCAAA+TGG | + | chr4.1:29804480-29804499 | None:intergenic | 30.0% | |
| GGGATGTATTATACTTTATC+TGG | - | chr4.1:29803738-29803757 | MS.gene52090:CDS | 30.0% | |
| GTTATTGACATTACCTGATT+AGG | + | chr4.1:29805161-29805180 | None:intergenic | 30.0% | |
| TACCTTCAAAGAATGAGAAA+TGG | + | chr4.1:29804833-29804852 | None:intergenic | 30.0% | |
| TAGAGTAATTCTTCTTGCTA+GGG | + | chr4.1:29805868-29805887 | None:intergenic | 30.0% | |
| TATATACTCGCATTTGGTAA+AGG | + | chr4.1:29804432-29804451 | None:intergenic | 30.0% | |
| TCATTGTGAGATTTACTTTG+TGG | + | chr4.1:29802296-29802315 | None:intergenic | 30.0% | |
| TCCTAAGTATCAACCAAAAT+GGG | - | chr4.1:29804695-29804714 | MS.gene52090:intron | 30.0% | |
| TGACAAACTAATATCTGAGT+GGG | - | chr4.1:29805754-29805773 | MS.gene52090:intron | 30.0% | |
| TGTAGTCCATCATTTATTTC+TGG | + | chr4.1:29803594-29803613 | None:intergenic | 30.0% | |
| TTAATAAATAAGGTGGCTTG+TGG | + | chr4.1:29804909-29804928 | None:intergenic | 30.0% | |
| TTGACAAACTAATATCTGAG+TGG | - | chr4.1:29805753-29805772 | MS.gene52090:intron | 30.0% | |
| TTTACTCATAAAGTGTGAAC+AGG | + | chr4.1:29802364-29802383 | None:intergenic | 30.0% | |
| TTTCTCTTATAGTGTGGTAA+TGG | - | chr4.1:29802767-29802786 | MS.gene52090:intron | 30.0% | |
| ! | AAGTATAATACATCCCCTTT+TGG | + | chr4.1:29803734-29803753 | None:intergenic | 30.0% |
| ! | AATTGTTGGTCTATGCTTAA+GGG | - | chr4.1:29803982-29804001 | MS.gene52090:CDS | 30.0% |
| ! | ATTTTCTGGATGTAACTTGA+TGG | + | chr4.1:29804975-29804994 | None:intergenic | 30.0% |
| ! | GTAGTCCATCATTTATTTCT+GGG | + | chr4.1:29803593-29803612 | None:intergenic | 30.0% |
| ! | TAATTGTTGGTCTATGCTTA+AGG | - | chr4.1:29803981-29804000 | MS.gene52090:CDS | 30.0% |
| ! | TCATTCTTTGAAGGTAAACT+TGG | - | chr4.1:29804837-29804856 | MS.gene52090:intron | 30.0% |
| !! | AGAAATAAATGATGGACTAC+AGG | - | chr4.1:29803593-29803612 | MS.gene52090:intron | 30.0% |
| !! | GAAATAAATGATGGACTACA+GGG | - | chr4.1:29803594-29803613 | MS.gene52090:intron | 30.0% |
| !! | TACTTTGAGGTACTTAAGTA+TGG | - | chr4.1:29804042-29804061 | MS.gene52090:CDS | 30.0% |
| !! | TCAAGATCAAAGCATTGAAA+AGG | - | chr4.1:29804249-29804268 | MS.gene52090:CDS | 30.0% |
| !! | TTTTAATTAACATGGCATGC+AGG | - | chr4.1:29804359-29804378 | MS.gene52090:CDS | 30.0% |
| !!! | TGTGGTAATGGTACAATTTT+TGG | - | chr4.1:29802779-29802798 | MS.gene52090:intron | 30.0% |
| AAAAGATTCACCTCCAAAAG+GGG | - | chr4.1:29803718-29803737 | MS.gene52090:CDS | 35.0% | |
| AACCATTCACAGAACAACAA+TGG | - | chr4.1:29804218-29804237 | MS.gene52090:CDS | 35.0% | |
| ACAAACTAATATCTGAGTGG+GGG | - | chr4.1:29805756-29805775 | MS.gene52090:intron | 35.0% | |
| ACAATTGAGGATAGTAGAGA+TGG | - | chr4.1:29804939-29804958 | MS.gene52090:intron | 35.0% | |
| ACATAAAGACATGCAACTAC+AGG | - | chr4.1:29803351-29803370 | MS.gene52090:CDS | 35.0% | |
| ATCTTTAACTAGTGTCCAAG+AGG | - | chr4.1:29803273-29803292 | MS.gene52090:CDS | 35.0% | |
| ATGAACCTGGTTAAATGCTT+TGG | + | chr4.1:29804877-29804896 | None:intergenic | 35.0% | |
| ATTATTCCTCCATTGTACTG+AGG | + | chr4.1:29803564-29803583 | None:intergenic | 35.0% | |
| CAAAAGATTCACCTCCAAAA+GGG | - | chr4.1:29803717-29803736 | MS.gene52090:CDS | 35.0% | |
| CAAGTAATACCCAAAGTTAG+AGG | + | chr4.1:29803507-29803526 | None:intergenic | 35.0% | |
| CATAGACCAACAATTAGACT+CGG | + | chr4.1:29803977-29803996 | None:intergenic | 35.0% | |
| CTCCATTTCTCATTCTTTGA+AGG | - | chr4.1:29804828-29804847 | MS.gene52090:intron | 35.0% | |
| GACAAACTAATATCTGAGTG+GGG | - | chr4.1:29805755-29805774 | MS.gene52090:intron | 35.0% | |
| GCGGTTGTTAAAACAAATGA+AGG | - | chr4.1:29803925-29803944 | MS.gene52090:CDS | 35.0% | |
| GTATGATGACATACATCAGA+AGG | + | chr4.1:29802010-29802029 | None:intergenic | 35.0% | |
| GTGGATCAATATTATGAACC+TGG | + | chr4.1:29804890-29804909 | None:intergenic | 35.0% | |
| GTTTCATAGCAGATACATCA+GGG | - | chr4.1:29804007-29804026 | MS.gene52090:CDS | 35.0% | |
| TATTCTGACTACTTGAGTGT+GGG | + | chr4.1:29805310-29805329 | None:intergenic | 35.0% | |
| TGGAAATAGTTATCTTTCCC+TGG | + | chr4.1:29804603-29804622 | None:intergenic | 35.0% | |
| TTATTCTGACTACTTGAGTG+TGG | + | chr4.1:29805311-29805330 | None:intergenic | 35.0% | |
| TTGACATTACCTGATTAGGT+TGG | + | chr4.1:29805157-29805176 | None:intergenic | 35.0% | |
| TTGTTCTGTGAATGGTTGTA+AGG | + | chr4.1:29804215-29804234 | None:intergenic | 35.0% | |
| TTTCATAGCAGATACATCAG+GGG | - | chr4.1:29804008-29804027 | MS.gene52090:CDS | 35.0% | |
| TTTCCATTCGTGATTTGAGT+AGG | - | chr4.1:29805583-29805602 | MS.gene52090:intron | 35.0% | |
| TTTGGACTGCTAAGTTAAGT+TGG | + | chr4.1:29804740-29804759 | None:intergenic | 35.0% | |
| ! | GAGAGTGAATAAACCCATTT+TGG | + | chr4.1:29804711-29804730 | None:intergenic | 35.0% |
| ! | TATAATACATCCCCTTTTGG+AGG | + | chr4.1:29803731-29803750 | None:intergenic | 35.0% |
| ! | TTCCATTGTTGTTCTGTGAA+TGG | + | chr4.1:29804223-29804242 | None:intergenic | 35.0% |
| ! | TTTTTGCCGAGTCTAATTGT+TGG | - | chr4.1:29803968-29803987 | MS.gene52090:CDS | 35.0% |
| !! | ACTGCTAAGTTAAGTTGGTT+TGG | + | chr4.1:29804735-29804754 | None:intergenic | 35.0% |
| !! | CTGCTAAGTTAAGTTGGTTT+GGG | + | chr4.1:29804734-29804753 | None:intergenic | 35.0% |
| !! | CTTTTGGAGGTGAATCTTTT+GGG | + | chr4.1:29803718-29803737 | None:intergenic | 35.0% |
| !! | TGCTAAGTTAAGTTGGTTTG+GGG | + | chr4.1:29804733-29804752 | None:intergenic | 35.0% |
| !! | TTGATTTGGAGGTAAAATCC+TGG | - | chr4.1:29802391-29802410 | MS.gene52090:intron | 35.0% |
| !! | TTTTGGGAGACACTATCATA+TGG | + | chr4.1:29803702-29803721 | None:intergenic | 35.0% |
| !!! | ACCCATTTTGGTTGATACTT+AGG | + | chr4.1:29804699-29804718 | None:intergenic | 35.0% |
| AAGAGTCGTCCTATCTTACT+TGG | + | chr4.1:29805429-29805448 | None:intergenic | 40.0% | |
| ACACAAATGAATACGCACCA+GGG | - | chr4.1:29804583-29804602 | MS.gene52090:intron | 40.0% | |
| ACCTAGATGAGAACCAATCT+TGG | + | chr4.1:29804527-29804546 | None:intergenic | 40.0% | |
| ACTGTAGCATTTGATCAGCT+TGG | + | chr4.1:29804623-29804642 | None:intergenic | 40.0% | |
| AGAACTCACAATCATGCAGT+CGG | + | chr4.1:29805456-29805475 | None:intergenic | 40.0% | |
| AGATACAAGGGCCAAGTTAT+TGG | - | chr4.1:29804783-29804802 | MS.gene52090:intron | 40.0% | |
| ATGTATGTCATCATACTCGC+AGG | - | chr4.1:29802014-29802033 | MS.gene52090:CDS | 40.0% | |
| ATTAACATGGCATGCAGGAA+CGG | - | chr4.1:29804364-29804383 | MS.gene52090:CDS | 40.0% | |
| ATTACAATACCTTGAACCCC+TGG | + | chr4.1:29805650-29805669 | None:intergenic | 40.0% | |
| CAACATCCCAACCAATAACT+TGG | + | chr4.1:29804797-29804816 | None:intergenic | 40.0% | |
| CATGAAAAAGGGACAACTCA+AGG | + | chr4.1:29805820-29805839 | None:intergenic | 40.0% | |
| CCAAAAGATTCACCTCCAAA+AGG | - | chr4.1:29803716-29803735 | MS.gene52090:CDS | 40.0% | |
| GAGGATTTGAGAGTCACATA+CGG | - | chr4.1:29803454-29803473 | MS.gene52090:CDS | 40.0% | |
| GCACTTCCAAATGGAAACTT+TGG | + | chr4.1:29804471-29804490 | None:intergenic | 40.0% | |
| GCTTGGTTACAAGTGAGTAA+TGG | - | chr4.1:29803886-29803905 | MS.gene52090:intron | 40.0% | |
| GGTTTCATAGCAGATACATC+AGG | - | chr4.1:29804006-29804025 | MS.gene52090:CDS | 40.0% | |
| GTACCTACTCAAATCACGAA+TGG | + | chr4.1:29805589-29805608 | None:intergenic | 40.0% | |
| GTATTGTAATGTGGACAGCA+TGG | - | chr4.1:29805660-29805679 | MS.gene52090:intron | 40.0% | |
| TAATGCTAACTAGTGCCTCT+TGG | + | chr4.1:29803291-29803310 | None:intergenic | 40.0% | |
| TACACAAATGAATACGCACC+AGG | - | chr4.1:29804582-29804601 | MS.gene52090:intron | 40.0% | |
| TACAGGGATGGACATCATTT+GGG | - | chr4.1:29803610-29803629 | MS.gene52090:intron | 40.0% | |
| TATGACCGTCCAAGTAAGAT+AGG | - | chr4.1:29805417-29805436 | MS.gene52090:intron | 40.0% | |
| TCAATGGAAGCTCTCATGTA+AGG | + | chr4.1:29805080-29805099 | None:intergenic | 40.0% | |
| TCACACAATATTACCGTTCG+AGG | - | chr4.1:29804651-29804670 | MS.gene52090:intron | 40.0% | |
| TCTGTTGTGGGAAGATACAA+GGG | - | chr4.1:29804771-29804790 | MS.gene52090:intron | 40.0% | |
| TGGAAATGTTCCTGTAACAG+CGG | - | chr4.1:29803906-29803925 | MS.gene52090:CDS | 40.0% | |
| TGGAGGTAAAATCCTGGTAA+AGG | - | chr4.1:29802397-29802416 | MS.gene52090:intron | 40.0% | |
| TTACAATACCTTGAACCCCT+GGG | + | chr4.1:29805649-29805668 | None:intergenic | 40.0% | |
| TTCTGTTGTGGGAAGATACA+AGG | - | chr4.1:29804770-29804789 | MS.gene52090:intron | 40.0% | |
| TTGTCAACAACATCACCTGT+TGG | + | chr4.1:29805740-29805759 | None:intergenic | 40.0% | |
| ! | ACCAAGATTGGTTCTCATCT+AGG | - | chr4.1:29804523-29804542 | MS.gene52090:intron | 40.0% |
| ! | CCTAGAGCTTTTGATCTTGA+CGG | - | chr4.1:29805331-29805350 | MS.gene52090:intron | 40.0% |
| ! | CTTGCTGATTGCAAGGAATT+CGG | - | chr4.1:29805474-29805493 | MS.gene52090:intron | 40.0% |
| ! | TCATGTAAGGCAAGTTGAGA+GGG | + | chr4.1:29805067-29805086 | None:intergenic | 40.0% |
| ! | TTCAGCCAAAGCATTTAACC+AGG | - | chr4.1:29804869-29804888 | MS.gene52090:intron | 40.0% |
| ! | TTGCTGATTGCAAGGAATTC+GGG | - | chr4.1:29805475-29805494 | MS.gene52090:intron | 40.0% |
| !! | AGAAGCAGTAAGGGTATCAA+TGG | + | chr4.1:29805096-29805115 | None:intergenic | 40.0% |
| !! | CCTTTTGGAGGTGAATCTTT+TGG | + | chr4.1:29803719-29803738 | None:intergenic | 40.0% |
| !! | CTTGAGTTGTCCCTTTTTCA+TGG | - | chr4.1:29805818-29805837 | MS.gene52090:intron | 40.0% |
| !! | GGGTTCAAGGTATTGTAATG+TGG | - | chr4.1:29805651-29805670 | MS.gene52090:intron | 40.0% |
| !! | GTTTTAACAACCGCTGTTAC+AGG | + | chr4.1:29803919-29803938 | None:intergenic | 40.0% |
| !! | TAAATGATGGACTACAGGGA+TGG | - | chr4.1:29803598-29803617 | MS.gene52090:intron | 40.0% |
| ACAACTCAAGGAGTCCATCT+TGG | + | chr4.1:29805808-29805827 | None:intergenic | 45.0% | |
| ACAAGGGCCAAGTTATTGGT+TGG | - | chr4.1:29804787-29804806 | MS.gene52090:intron | 45.0% | |
| ACAGGGATGGACATCATTTG+GGG | - | chr4.1:29803611-29803630 | MS.gene52090:intron | 45.0% | |
| AGAACCAATCTTGGTACGCA+CGG | + | chr4.1:29804518-29804537 | None:intergenic | 45.0% | |
| CACATCTTATAGCAACCCTG+CGG | + | chr4.1:29805689-29805708 | None:intergenic | 45.0% | |
| CATTGTACTGAGGCTTCTGT+GGG | + | chr4.1:29803554-29803573 | None:intergenic | 45.0% | |
| CCGTCAAGATCAAAAGCTCT+AGG | + | chr4.1:29805334-29805353 | None:intergenic | 45.0% | |
| CTACAGGGATGGACATCATT+TGG | - | chr4.1:29803609-29803628 | MS.gene52090:intron | 45.0% | |
| CTCGCTCACAACAAGATTTC+AGG | + | chr4.1:29805285-29805304 | None:intergenic | 45.0% | |
| CTGCTTCTCGTTTGCCAATA+TGG | - | chr4.1:29805108-29805127 | MS.gene52090:intron | 45.0% | |
| CTTGGTTGACTACCTTTACC+AGG | + | chr4.1:29802412-29802431 | None:intergenic | 45.0% | |
| GAACTCACAATCATGCAGTC+GGG | + | chr4.1:29805455-29805474 | None:intergenic | 45.0% | |
| GGAAGCTGAGCTATACTTTG+AGG | - | chr4.1:29804029-29804048 | MS.gene52090:CDS | 45.0% | |
| GTAATCTCTGCTCGAGAACT+TGG | + | chr4.1:29802430-29802449 | None:intergenic | 45.0% | |
| GTCGTCCTATCTTACTTGGA+CGG | + | chr4.1:29805425-29805444 | None:intergenic | 45.0% | |
| TGGCAAACGAGAAGCAGTAA+GGG | + | chr4.1:29805105-29805124 | None:intergenic | 45.0% | |
| TGTTGCAAGCCAACCTAATC+AGG | - | chr4.1:29805145-29805164 | MS.gene52090:intron | 45.0% | |
| TTAGGGACAACAGACCAAGA+TGG | - | chr4.1:29805791-29805810 | MS.gene52090:intron | 45.0% | |
| TTCCTTGTTCGTCTAGTGCT+TGG | + | chr4.1:29804407-29804426 | None:intergenic | 45.0% | |
| TTGGCAAACGAGAAGCAGTA+AGG | + | chr4.1:29805106-29805125 | None:intergenic | 45.0% | |
| ! | CAAGGGCCAAGTTATTGGTT+GGG | - | chr4.1:29804788-29804807 | MS.gene52090:intron | 45.0% |
| ! | CGCTTTTGAATTGTGCAGCT+TGG | - | chr4.1:29803869-29803888 | MS.gene52090:intron | 45.0% |
| ! | CTCATGTAAGGCAAGTTGAG+AGG | + | chr4.1:29805068-29805087 | None:intergenic | 45.0% |
| ! | GGGGGAAAGCAGAAGTTTTA+GGG | - | chr4.1:29805774-29805793 | MS.gene52090:intron | 45.0% |
| ! | GTGAGTTCTTGCTGATTGCA+AGG | - | chr4.1:29805467-29805486 | MS.gene52090:intron | 45.0% |
| ! | TGGGGGAAAGCAGAAGTTTT+AGG | - | chr4.1:29805773-29805792 | MS.gene52090:intron | 45.0% |
| ! | TGTTGGTCTATGCTTAAGGG+TGG | - | chr4.1:29803985-29804004 | MS.gene52090:CDS | 45.0% |
| !! | ATATTTAAAAAAATAAAAGT+CGG | - | chr4.1:29802941-29802960 | MS.gene52090:CDS | 5.0% |
| !!! | AATTGAATAAAATAAATTTT+AGG | - | chr4.1:29802712-29802731 | MS.gene52090:intron | 5.0% |
| !!! | TTATAAATTTATAAAGTTTT+GGG | + | chr4.1:29803102-29803121 | None:intergenic | 5.0% |
| !!! | TTTATAAATTTATAAAGTTT+TGG | + | chr4.1:29803103-29803122 | None:intergenic | 5.0% |
| ACAACCGTGCGTACCAAGAT+TGG | - | chr4.1:29804511-29804530 | MS.gene52090:intron | 50.0% | |
| CAGAAGCCTCAGTACAATGG+AGG | - | chr4.1:29803555-29803574 | MS.gene52090:intron | 50.0% | |
| CATGCAGGAACGGAAGAGAA+AGG | - | chr4.1:29804374-29804393 | MS.gene52090:CDS | 50.0% | |
| CCACAGAAGCCTCAGTACAA+TGG | - | chr4.1:29803552-29803571 | MS.gene52090:CDS | 50.0% | |
| CCATTGTACTGAGGCTTCTG+TGG | + | chr4.1:29803555-29803574 | None:intergenic | 50.0% | |
| CTTCGAGCAAGCTCTTAGAG+AGG | - | chr4.1:29805613-29805632 | MS.gene52090:intron | 50.0% | |
| GACTCCAAGCCAATTCCAAG+CGG | + | chr4.1:29805029-29805048 | None:intergenic | 50.0% | |
| GTCCAAGCACTAGACGAACA+AGG | - | chr4.1:29804402-29804421 | MS.gene52090:intron | 50.0% | |
| GTGAATAGGCAATTGCCGCT+TGG | - | chr4.1:29805011-29805030 | MS.gene52090:intron | 50.0% | |
| ! | AGGCAATTGCCGCTTGGAAT+TGG | - | chr4.1:29805017-29805036 | MS.gene52090:intron | 50.0% |
| ! | ATTGCCGCTTGGAATTGGCT+TGG | - | chr4.1:29805022-29805041 | MS.gene52090:intron | 50.0% |
| ! | GTAAGGCAAGTTGAGAGGGA+GGG | + | chr4.1:29805063-29805082 | None:intergenic | 50.0% |
| ! | TGTAAGGCAAGTTGAGAGGG+AGG | + | chr4.1:29805064-29805083 | None:intergenic | 50.0% |
| ! | GCAAGTTGAGAGGGAGGGAA+GGG | + | chr4.1:29805058-29805077 | None:intergenic | 55.0% |
| CACTCTCACCCAGGGGTTCA+AGG | - | chr4.1:29805638-29805657 | MS.gene52090:intron | 60.0% | |
| TGGACAGCATGGACACCGCA+GGG | - | chr4.1:29805671-29805690 | MS.gene52090:intron | 60.0% | |
| ! | AGAGAGGCACACTCTCACCC+AGG | - | chr4.1:29805629-29805648 | MS.gene52090:intron | 60.0% |
| ! | AGAGGCACACTCTCACCCAG+GGG | - | chr4.1:29805631-29805650 | MS.gene52090:intron | 60.0% |
| ! | GAGAGGCACACTCTCACCCA+GGG | - | chr4.1:29805630-29805649 | MS.gene52090:intron | 60.0% |
| ! | GGCAAGTTGAGAGGGAGGGA+AGG | + | chr4.1:29805059-29805078 | None:intergenic | 60.0% |
| GTGGACAGCATGGACACCGC+AGG | - | chr4.1:29805670-29805689 | MS.gene52090:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29801996 | 29805958 | 29801996 | ID=MS.gene52090 |
| chr4.1 | mRNA | 29801996 | 29805958 | 29801996 | ID=MS.gene52090.t1;Parent=MS.gene52090 |
| chr4.1 | exon | 29805919 | 29805958 | 29805919 | ID=MS.gene52090.t1.exon1;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29805919 | 29805958 | 29805919 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29804535 | 29804581 | 29804535 | ID=MS.gene52090.t1.exon2;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29804535 | 29804581 | 29804535 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29804195 | 29804414 | 29804195 | ID=MS.gene52090.t1.exon3;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29804195 | 29804414 | 29804195 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29803904 | 29804067 | 29803904 | ID=MS.gene52090.t1.exon4;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29803904 | 29804067 | 29803904 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29803684 | 29803782 | 29803684 | ID=MS.gene52090.t1.exon5;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29803684 | 29803782 | 29803684 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29802788 | 29803573 | 29802788 | ID=MS.gene52090.t1.exon6;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29802788 | 29803573 | 29802788 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| chr4.1 | exon | 29801996 | 29802349 | 29801996 | ID=MS.gene52090.t1.exon7;Parent=MS.gene52090.t1 |
| chr4.1 | CDS | 29801996 | 29802349 | 29801996 | ID=cds.MS.gene52090.t1;Parent=MS.gene52090.t1 |
| Gene Sequence |
| Protein sequence |
