Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044959.t1 | XP_003621871.1 | 96 | 570 | 23 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1134.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044959.t1 | A0A1P8B8F8 | 38.8 | 562 | 313 | 7 | 3 | 553 | 12 | 553 | 4.0e-115 | 416.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044959.t1 | G7KWV0 | 96.0 | 570 | 23 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1134.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014213 | MS.gene044959 | PPI |
| MS.gene044959 | MS.gene057723 | PPI |
| MS.gene99993 | MS.gene044959 | PPI |
| MS.gene054660 | MS.gene044959 | PPI |
| MS.gene044959 | MS.gene52090 | PPI |
| MS.gene044959 | MS.gene59021 | PPI |
| MS.gene044959 | MS.gene003507 | PPI |
| MS.gene044959 | MS.gene032541 | PPI |
| MS.gene044959 | MS.gene62099 | PPI |
| MS.gene044959 | MS.gene68749 | PPI |
| MS.gene044959 | MS.gene063101 | PPI |
| MS.gene044959 | MS.gene74061 | PPI |
| MS.gene044959 | MS.gene68149 | PPI |
| MS.gene044959 | MS.gene75410 | PPI |
| MS.gene044959 | MS.gene53185 | PPI |
| MS.gene044959 | MS.gene90963 | PPI |
| MS.gene062453 | MS.gene044959 | PPI |
| MS.gene52090 | MS.gene044959 | PPI |
| MS.gene74061 | MS.gene044959 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044959.t1 | MTR_7g024420 | 95.965 | 570 | 23 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1127 |
| MS.gene044959.t1 | MTR_5g049180 | 81.404 | 570 | 106 | 0 | 1 | 570 | 1 | 570 | 0.0 | 998 |
| MS.gene044959.t1 | MTR_4g074070 | 75.657 | 571 | 138 | 1 | 1 | 570 | 1 | 571 | 0.0 | 934 |
| MS.gene044959.t1 | MTR_1g106200 | 48.893 | 542 | 272 | 3 | 9 | 545 | 18 | 559 | 0.0 | 559 |
| MS.gene044959.t1 | MTR_1g106910 | 47.780 | 563 | 284 | 5 | 4 | 559 | 10 | 569 | 0.0 | 547 |
| MS.gene044959.t1 | MTR_1g106790 | 48.327 | 538 | 274 | 3 | 8 | 541 | 17 | 554 | 0.0 | 546 |
| MS.gene044959.t1 | MTR_1g106770 | 48.752 | 521 | 263 | 3 | 29 | 545 | 4 | 524 | 0.0 | 531 |
| MS.gene044959.t1 | MTR_1g106200 | 44.649 | 542 | 262 | 4 | 9 | 545 | 24 | 532 | 5.67e-169 | 491 |
| MS.gene044959.t1 | MTR_3g117800 | 38.532 | 545 | 301 | 10 | 9 | 546 | 1 | 518 | 3.83e-132 | 396 |
| MS.gene044959.t1 | MTR_3g117800 | 41.758 | 455 | 255 | 6 | 99 | 546 | 16 | 467 | 1.03e-126 | 380 |
| MS.gene044959.t1 | MTR_3g117800 | 42.925 | 424 | 234 | 4 | 128 | 546 | 17 | 437 | 3.51e-124 | 373 |
| MS.gene044959.t1 | MTR_1g017020 | 30.882 | 544 | 328 | 15 | 35 | 543 | 353 | 883 | 4.77e-68 | 237 |
| MS.gene044959.t1 | MTR_3g103610 | 30.280 | 535 | 313 | 15 | 43 | 537 | 200 | 714 | 5.73e-64 | 223 |
| MS.gene044959.t1 | MTR_4g121520 | 43.842 | 203 | 88 | 1 | 305 | 507 | 223 | 399 | 1.61e-47 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044959.t1 | AT4G33840 | 57.989 | 557 | 219 | 6 | 16 | 564 | 19 | 568 | 0.0 | 679 |
| MS.gene044959.t1 | AT4G33830 | 57.914 | 556 | 225 | 6 | 7 | 557 | 11 | 562 | 0.0 | 669 |
| MS.gene044959.t1 | AT4G33860 | 57.798 | 545 | 222 | 5 | 16 | 555 | 19 | 560 | 0.0 | 668 |
| MS.gene044959.t1 | AT4G33810 | 38.652 | 564 | 315 | 7 | 1 | 553 | 10 | 553 | 2.80e-141 | 421 |
| MS.gene044959.t1 | AT4G33810 | 38.652 | 564 | 315 | 7 | 1 | 553 | 10 | 553 | 2.80e-141 | 421 |
| MS.gene044959.t1 | AT4G33810 | 38.652 | 564 | 315 | 7 | 1 | 553 | 10 | 553 | 2.80e-141 | 421 |
| MS.gene044959.t1 | AT4G33810 | 42.647 | 476 | 264 | 5 | 87 | 553 | 38 | 513 | 9.81e-139 | 413 |
| MS.gene044959.t1 | AT4G33810 | 42.647 | 476 | 264 | 5 | 87 | 553 | 38 | 513 | 9.81e-139 | 413 |
| MS.gene044959.t1 | AT4G33820 | 39.060 | 553 | 301 | 8 | 5 | 540 | 8 | 541 | 7.53e-136 | 407 |
| MS.gene044959.t1 | AT4G38650 | 39.739 | 536 | 288 | 10 | 22 | 546 | 34 | 545 | 1.45e-133 | 401 |
| MS.gene044959.t1 | AT2G14690 | 37.615 | 545 | 295 | 8 | 18 | 544 | 28 | 545 | 5.28e-126 | 382 |
| MS.gene044959.t1 | AT4G38300 | 44.747 | 257 | 130 | 2 | 192 | 448 | 12 | 256 | 4.35e-74 | 238 |
| MS.gene044959.t1 | AT1G58370 | 29.963 | 544 | 322 | 15 | 35 | 537 | 362 | 887 | 1.19e-67 | 236 |
| MS.gene044959.t1 | AT1G58370 | 29.963 | 544 | 322 | 15 | 35 | 537 | 390 | 915 | 1.46e-67 | 236 |
| MS.gene044959.t1 | AT1G10050 | 29.679 | 529 | 329 | 17 | 43 | 537 | 550 | 1069 | 7.21e-61 | 218 |
| MS.gene044959.t1 | AT1G10050 | 29.679 | 529 | 329 | 17 | 43 | 537 | 518 | 1037 | 8.71e-61 | 218 |
| MS.gene044959.t1 | AT1G10050 | 29.679 | 529 | 329 | 17 | 43 | 537 | 518 | 1037 | 8.71e-61 | 218 |
| MS.gene044959.t1 | AT4G08160 | 27.788 | 547 | 344 | 17 | 35 | 540 | 190 | 726 | 4.91e-57 | 204 |
| MS.gene044959.t1 | AT4G08160 | 28.512 | 477 | 292 | 15 | 35 | 471 | 190 | 657 | 2.04e-52 | 190 |
Find 132 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTCTTCGAAAGTAAAT+TGG | 0.117129 | 7.1:+73248947 | MS.gene044959:CDS |
| ATAATACTTCTGCGGAAATT+TGG | 0.146645 | 7.1:+73248306 | MS.gene044959:CDS |
| TTAGAGGCCACAATATATTT+TGG | 0.167474 | 7.1:+73248778 | MS.gene044959:CDS |
| ATCCTCAATACCAACCTTAT+TGG | 0.189375 | 7.1:+73248805 | MS.gene044959:CDS |
| ACAACCAAAGGATTTAAATT+TGG | 0.200208 | 7.1:+73248105 | MS.gene044959:CDS |
| CTATGTGTCATCCTACTTTC+AGG | 0.218103 | 7.1:+73246287 | MS.gene044959:CDS |
| GAGCCACTGGTTTGCCAATA+TGG | 0.224836 | 7.1:+73249219 | MS.gene044959:CDS |
| TGTAGTCCATCATTCAATTC+TGG | 0.258365 | 7.1:-73247459 | None:intergenic |
| CATGTGGTTGATTTCTACTA+TGG | 0.259879 | 7.1:-73247551 | None:intergenic |
| TTAACGATGCAGTCGAAAAT+AGG | 0.263043 | 7.1:+73248853 | MS.gene044959:CDS |
| GGCAAGTTAGGAGGACTATT+AGG | 0.280499 | 7.1:-73249167 | None:intergenic |
| GGTCACCGCAAGGTTGTTAT+AGG | 0.291268 | 7.1:+73249441 | MS.gene044959:CDS |
| AGCCAATTGCCTCTTGGAAT+TGG | 0.304415 | 7.1:+73249128 | MS.gene044959:CDS |
| CCTGAACAATAATGCATATC+AGG | 0.315794 | 7.1:+73248617 | MS.gene044959:CDS |
| AGGCCTCAAAGTATCCATTT+TGG | 0.316564 | 7.1:-73249565 | None:intergenic |
| CCTGATATGCATTATTGTTC+AGG | 0.318329 | 7.1:-73248617 | None:intergenic |
| AAATTATTATTCTTCTTGAT+AGG | 0.320746 | 7.1:-73249626 | None:intergenic |
| ACCACCAAATTTAAATCCTT+TGG | 0.322474 | 7.1:-73248109 | None:intergenic |
| AGGATTGCATTATTCTTTAT+CGG | 0.324729 | 7.1:+73247605 | MS.gene044959:CDS |
| TCCTCAATACCAACCTTATT+GGG | 0.330100 | 7.1:+73248806 | MS.gene044959:CDS |
| TAATTGTTGGTCCATGCTTA+AGG | 0.335231 | 7.1:+73248149 | MS.gene044959:CDS |
| TACAAGGATGGACAACATTT+GGG | 0.335968 | 7.1:+73247478 | MS.gene044959:CDS |
| TAATACTTCTGCGGAAATTT+GGG | 0.337149 | 7.1:+73248307 | MS.gene044959:CDS |
| TAATTTCACTCATCATATAA+AGG | 0.356203 | 7.1:+73249643 | MS.gene044959:CDS |
| CCACAAAAGCCTCAGTATAA+TGG | 0.361959 | 7.1:+73247420 | MS.gene044959:CDS |
| CGTCGCAAGCCAACCTAATC+AGG | 0.365336 | 7.1:+73249256 | MS.gene044959:CDS |
| CTACAAGGATGGACAACATT+TGG | 0.365394 | 7.1:+73247477 | MS.gene044959:CDS |
| TCTAATTCTGTGATCCATAT+TGG | 0.366863 | 7.1:-73249233 | None:intergenic |
| GCTCTCATGTAAGGCAAGTT+AGG | 0.374261 | 7.1:-73249179 | None:intergenic |
| AGATACAAGGGTCAGCTTAT+TGG | 0.375943 | 7.1:+73248894 | MS.gene044959:CDS |
| GCAAGTTAGGAGGACTATTA+GGG | 0.379213 | 7.1:-73249166 | None:intergenic |
| AATTGTTGGTCCATGCTTAA+GGG | 0.382621 | 7.1:+73248150 | MS.gene044959:CDS |
| GTAAGAGATATACTTGCATT+TGG | 0.383405 | 7.1:-73248546 | None:intergenic |
| ATATACTTGCATTTGGTAAA+GGG | 0.408985 | 7.1:-73248539 | None:intergenic |
| TTAAGCATGGACCAACAATT+AGG | 0.409585 | 7.1:-73248147 | None:intergenic |
| TCAGGGATGACAGACCAAAA+TGG | 0.411241 | 7.1:+73249551 | MS.gene044959:CDS |
| CATTCTCACCCTGGGATTCA+AGG | 0.416224 | 7.1:+73249398 | MS.gene044959:CDS |
| TCATTCTTCGAAAGTAAATT+GGG | 0.419021 | 7.1:+73248948 | MS.gene044959:CDS |
| TTTCGAAGAATGAGAAATGT+AGG | 0.419626 | 7.1:-73248938 | None:intergenic |
| ACCAAAGGATTTAAATTTGG+TGG | 0.427149 | 7.1:+73248108 | MS.gene044959:CDS |
| ATCAGGATTGGTTCGCATCT+AGG | 0.431094 | 7.1:+73248634 | MS.gene044959:CDS |
| GGATTGCATTATTCTTTATC+GGG | 0.431352 | 7.1:+73247606 | MS.gene044959:CDS |
| GATATACTTGCATTTGGTAA+AGG | 0.436075 | 7.1:-73248540 | None:intergenic |
| TAGAAAGCTTACTTCAACAT+TGG | 0.438640 | 7.1:-73247309 | None:intergenic |
| GACAGTGAAGAAACCCAATA+AGG | 0.439540 | 7.1:-73248819 | None:intergenic |
| CGATCAGTTGATCAATGAAT+GGG | 0.439697 | 7.1:+73249514 | MS.gene044959:CDS |
| CAAGGGTCAGCTTATTGGTT+GGG | 0.443725 | 7.1:+73248899 | MS.gene044959:CDS |
| ATCATTAGGCAACAAATTTG+TGG | 0.445827 | 7.1:+73247524 | MS.gene044959:CDS |
| ATTATAATGCCTTGAATCCC+AGG | 0.448750 | 7.1:-73249407 | None:intergenic |
| AACATTGGCACTATAATCAT+AGG | 0.449608 | 7.1:-73247294 | None:intergenic |
| CTTGATACCCTTCGAGCCAC+TGG | 0.451044 | 7.1:+73249206 | MS.gene044959:CDS |
| TCTTCTCGATATACCTTGGC+GGG | 0.451065 | 7.1:-73249082 | None:intergenic |
| TAACGATGCAGTCGAAAATA+GGG | 0.456769 | 7.1:+73248854 | MS.gene044959:CDS |
| AAACAAGGTATTGCTGTTAG+AGG | 0.466497 | 7.1:+73248762 | MS.gene044959:CDS |
| TTTCGACTGCATCGTTAAGC+TGG | 0.469980 | 7.1:-73248848 | None:intergenic |
| ATTGAACATAGAGAATCATT+AGG | 0.471444 | 7.1:+73247510 | MS.gene044959:CDS |
| CAGTGGCTCGAAGGGTATCA+AGG | 0.472209 | 7.1:-73249205 | None:intergenic |
| ACCCAATAAGGTTGGTATTG+AGG | 0.474337 | 7.1:-73248807 | None:intergenic |
| CAGAAGATTTACCTACGAAA+AGG | 0.474683 | 7.1:+73247585 | MS.gene044959:CDS |
| TTGGGTTTCTTCACTGTCAC+CGG | 0.477213 | 7.1:+73248824 | MS.gene044959:CDS |
| ATCTTCTCGATATACCTTGG+CGG | 0.480704 | 7.1:-73249083 | None:intergenic |
| AATTATTATTCTTCTTGATA+GGG | 0.480741 | 7.1:-73249625 | None:intergenic |
| GTGAATAGCCAATTGCCTCT+TGG | 0.483750 | 7.1:+73249122 | MS.gene044959:CDS |
| AATGAGGTTCACAACATTGA+CGG | 0.485943 | 7.1:+73248996 | MS.gene044959:CDS |
| TCGATCAGTTGATCAATGAA+TGG | 0.489187 | 7.1:+73249513 | MS.gene044959:CDS |
| TCAAGAACAAAGTATTGAAA+AGG | 0.491272 | 7.1:+73248379 | MS.gene044959:CDS |
| ATGTGGTTGATTTCTACTAT+GGG | 0.491943 | 7.1:-73247550 | None:intergenic |
| GTCCAATTCCAAGAGGCAAT+TGG | 0.492692 | 7.1:-73249130 | None:intergenic |
| TTCAGCTAGGATGTTTAATG+AGG | 0.494998 | 7.1:+73248980 | MS.gene044959:CDS |
| TTGATCTTCTCGATATACCT+TGG | 0.495115 | 7.1:-73249086 | None:intergenic |
| TCAAGGGAAGCTCTCATGTA+AGG | 0.502828 | 7.1:-73249188 | None:intergenic |
| ATCTCTTACAATGAAGAGGC+CGG | 0.504359 | 7.1:+73248560 | MS.gene044959:CDS |
| TTCCATTGTGTCAAGATACA+AGG | 0.510850 | 7.1:+73248881 | MS.gene044959:CDS |
| ACAATAATGCATATCAGGAT+TGG | 0.518619 | 7.1:+73248622 | MS.gene044959:CDS |
| GTAGGCATTGTACTTCGAGC+AGG | 0.518834 | 7.1:+73249361 | MS.gene044959:intron |
| TTTGACGCTGATGCAATGCT+AGG | 0.520772 | 7.1:+73248729 | MS.gene044959:CDS |
| TTGTTGATAGCACTTCCAAA+TGG | 0.528695 | 7.1:-73248588 | None:intergenic |
| GTGGTTACTAACCTGAAAGT+AGG | 0.528846 | 7.1:-73246298 | None:intergenic |
| TCTCTTACAATGAAGAGGCC+GGG | 0.532395 | 7.1:+73248561 | MS.gene044959:CDS |
| GAGAGGCACATTCTCACCCT+GGG | 0.534920 | 7.1:+73249390 | MS.gene044959:CDS |
| ACTGCATCGTTAAGCTGGTC+CGG | 0.540100 | 7.1:-73248843 | None:intergenic |
| AATTTCAAGAACTTGCCTGC+AGG | 0.540391 | 7.1:+73249482 | MS.gene044959:CDS |
| ACAAGGGTCAGCTTATTGGT+TGG | 0.540589 | 7.1:+73248898 | MS.gene044959:CDS |
| GGTCTTATAGCAGATACAAC+AGG | 0.541628 | 7.1:+73248174 | MS.gene044959:CDS |
| ACCATTGAGGATAGTAGAGA+TGG | 0.546920 | 7.1:+73249050 | MS.gene044959:CDS |
| TTGGCAAACCAGTGGCTCGA+AGG | 0.547234 | 7.1:-73249214 | None:intergenic |
| TTGACGCTGATGCAATGCTA+GGG | 0.560587 | 7.1:+73248730 | MS.gene044959:CDS |
| ACCATCTCTACTATCCTCAA+TGG | 0.563345 | 7.1:-73249051 | None:intergenic |
| TGGCAAACCAGTGGCTCGAA+GGG | 0.572553 | 7.1:-73249213 | None:intergenic |
| GAATTGAATGATGGACTACA+AGG | 0.575757 | 7.1:+73247462 | MS.gene044959:CDS |
| GTATATCTCTTACAATGAAG+AGG | 0.580146 | 7.1:+73248556 | MS.gene044959:CDS |
| GTGAAGAAACCCAATAAGGT+TGG | 0.583381 | 7.1:-73248815 | None:intergenic |
| AGACCAAAATGGATACTTTG+AGG | 0.584675 | 7.1:+73249562 | MS.gene044959:CDS |
| CTCATGTAAGGCAAGTTAGG+AGG | 0.585719 | 7.1:-73249176 | None:intergenic |
| CATTTGAAAATGAAATGAAG+TGG | 0.592024 | 7.1:+73248670 | MS.gene044959:CDS |
| TGAATGATGGACTACAAGGA+TGG | 0.595944 | 7.1:+73247466 | MS.gene044959:CDS |
| CTAGGGTTTGCAGAGAAACA+AGG | 0.596108 | 7.1:+73248747 | MS.gene044959:CDS |
| TGATCGACAATATCACCTGC+AGG | 0.596189 | 7.1:-73249497 | None:intergenic |
| GATCATCCCAAAATATATTG+TGG | 0.597363 | 7.1:-73248785 | None:intergenic |
| GTAGAGCAATAATACTTCTG+CGG | 0.599674 | 7.1:+73248298 | MS.gene044959:intron |
| GCACTTCCAAATGGAAAACC+CGG | 0.599845 | 7.1:-73248579 | None:intergenic |
| AGAGAGGCACATTCTCACCC+TGG | 0.599965 | 7.1:+73249389 | MS.gene044959:CDS |
| TGTTGGTCCATGCTTAAGGG+TGG | 0.602822 | 7.1:+73248153 | MS.gene044959:CDS |
| CTTCGAGCAGGTTCTTAGAG+AGG | 0.610309 | 7.1:+73249373 | MS.gene044959:CDS |
| ATGATTCCTCCATTATACTG+AGG | 0.615693 | 7.1:-73247429 | None:intergenic |
| GTAGGATGACACATAGCAGA+AGG | 0.615796 | 7.1:-73246280 | None:intergenic |
| CTTCTCGATATACCTTGGCG+GGG | 0.616242 | 7.1:-73249081 | None:intergenic |
| ACCCTTGTATCTTGACACAA+TGG | 0.616316 | 7.1:-73248883 | None:intergenic |
| AACCATTCACAGAAAAGCAA+TGG | 0.617386 | 7.1:+73248348 | MS.gene044959:CDS |
| GAATGAATATAATACCATTG+AGG | 0.618665 | 7.1:+73249037 | MS.gene044959:CDS |
| CAAAAGCCTCAGTATAATGG+AGG | 0.621253 | 7.1:+73247423 | MS.gene044959:CDS |
| AGTGGCTCGAAGGGTATCAA+GGG | 0.623716 | 7.1:-73249204 | None:intergenic |
| GGATTCAAGGCATTATAATG+TGG | 0.623749 | 7.1:+73249411 | MS.gene044959:CDS |
| CATTCACAGAAAAGCAATGG+AGG | 0.635054 | 7.1:+73248351 | MS.gene044959:CDS |
| TGGACAGCGTGGTCACCGCA+AGG | 0.637568 | 7.1:+73249431 | MS.gene044959:CDS |
| ATGGTTTATCAACCCCGCCA+AGG | 0.638842 | 7.1:+73249069 | MS.gene044959:CDS |
| AAATGTTCCTGTCACAGCAG+TGG | 0.639689 | 7.1:+73248077 | MS.gene044959:CDS |
| GCAGTGGTTAAAACAACCAA+AGG | 0.642121 | 7.1:+73248093 | MS.gene044959:CDS |
| TCCATTGTGTCAAGATACAA+GGG | 0.642157 | 7.1:+73248882 | MS.gene044959:CDS |
| TTATAATGCCTTGAATCCCA+GGG | 0.658986 | 7.1:-73249406 | None:intergenic |
| GCATTATAATGTGGACAGCG+TGG | 0.659654 | 7.1:+73249420 | MS.gene044959:CDS |
| GATCAGTTGATCAATGAATG+GGG | 0.660135 | 7.1:+73249515 | MS.gene044959:CDS |
| ACAAGGATGGACAACATTTG+GGG | 0.661237 | 7.1:+73247479 | MS.gene044959:CDS |
| ATCAGTTGATCAATGAATGG+GGG | 0.663857 | 7.1:+73249516 | MS.gene044959:CDS |
| GATCCATATTGGCAAACCAG+TGG | 0.666725 | 7.1:-73249222 | None:intergenic |
| TATAAGACCACCCTTAAGCA+TGG | 0.666965 | 7.1:-73248160 | None:intergenic |
| TACACGAATGAATATGCGCA+AGG | 0.670467 | 7.1:+73248693 | MS.gene044959:CDS |
| GTTCAAGCAGTTAACGAACA+AGG | 0.671205 | 7.1:+73248513 | MS.gene044959:CDS |
| AGCTTGGATGCAAGTGAGTG+AGG | 0.677863 | 7.1:+73248053 | MS.gene044959:intron |
| GACTCAAGTCCAATTCCAAG+AGG | 0.679929 | 7.1:-73249137 | None:intergenic |
| TTCTGTGAGACACTATCATG+TGG | 0.711259 | 7.1:-73247567 | None:intergenic |
| CAAATCCTATAACAACCTTG+CGG | 0.718001 | 7.1:-73249446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAATATATATATATT+AGG | + | chr7.1:73247118-73247137 | MS.gene044959:intron | 0.0% |
| !! | TTATTAGATTTATATATTCT+TGG | - | chr7.1:73247232-73247251 | None:intergenic | 10.0% |
| !! | TTGAAGAATTAAAAAAAATT+GGG | - | chr7.1:73248265-73248284 | None:intergenic | 10.0% |
| !! | TTTGAAGAATTAAAAAAAAT+TGG | - | chr7.1:73248266-73248285 | None:intergenic | 10.0% |
| !!! | ATTTTTTCAAATTATTAGTT+AGG | - | chr7.1:73247726-73247745 | None:intergenic | 10.0% |
| !! | AAATTATTATTCTTCTTGAT+AGG | - | chr7.1:73249629-73249648 | None:intergenic | 15.0% |
| !! | AATTATTATTCTTCTTGATA+GGG | - | chr7.1:73249628-73249647 | None:intergenic | 15.0% |
| !! | ATTTATTTAATTACATGTGT+CGG | - | chr7.1:73246452-73246471 | None:intergenic | 15.0% |
| !! | TAGGTGTAAAATTAATAAAA+AGG | + | chr7.1:73248433-73248452 | MS.gene044959:intron | 15.0% |
| !!! | ACTAATAGTATTTTTTTGAT+AGG | + | chr7.1:73246787-73246806 | MS.gene044959:intron | 15.0% |
| !!! | TAATTTTTTTTTACCTGATT+AGG | - | chr7.1:73249272-73249291 | None:intergenic | 15.0% |
| !!! | TGTTTTTTATTTTAGCTTTA+CGG | + | chr7.1:73246944-73246963 | MS.gene044959:intron | 15.0% |
| !!! | TTTTTATTGCTTATTGTATA+CGG | - | chr7.1:73247145-73247164 | None:intergenic | 15.0% |
| !! | AGGAAAATAAAAAAAATCGA+AGG | - | chr7.1:73247176-73247195 | None:intergenic | 20.0% |
| !! | TAACAAGTTTAATTCTAACT+TGG | + | chr7.1:73248466-73248485 | MS.gene044959:intron | 20.0% |
| !! | TAATTTCACTCATCATATAA+AGG | + | chr7.1:73249643-73249662 | MS.gene044959:CDS | 20.0% |
| !! | TGCATCAAATTAAATATCAT+AGG | - | chr7.1:73247196-73247215 | None:intergenic | 20.0% |
| !!! | ATATCATAGATTTTGTATGA+AGG | + | chr7.1:73247645-73247664 | MS.gene044959:intron | 20.0% |
| !!! | ATTAATTTTACACCTATTGA+AGG | - | chr7.1:73248429-73248448 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTCAAATTATTAG+CGG | + | chr7.1:73246476-73246495 | MS.gene044959:intron | 20.0% |
| !!! | TTAAGCAATTTTGTTAACTT+TGG | - | chr7.1:73246849-73246868 | None:intergenic | 20.0% |
| !!! | TTTTTAATTCTTCAAAATGC+TGG | + | chr7.1:73248270-73248289 | MS.gene044959:intron | 20.0% |
| ! | AAAAATCCAGAATTGAATGA+TGG | + | chr7.1:73247453-73247472 | MS.gene044959:CDS | 25.0% |
| ! | ACAACCAAAGGATTTAAATT+TGG | + | chr7.1:73248105-73248124 | MS.gene044959:CDS | 25.0% |
| ! | AGGATTGCATTATTCTTTAT+CGG | + | chr7.1:73247605-73247624 | MS.gene044959:CDS | 25.0% |
| ! | ATATACTTGCATTTGGTAAA+GGG | - | chr7.1:73248542-73248561 | None:intergenic | 25.0% |
| ! | ATTGAACATAGAGAATCATT+AGG | + | chr7.1:73247510-73247529 | MS.gene044959:CDS | 25.0% |
| ! | CAATATAAATTACACTAGCT+AGG | - | chr7.1:73247872-73247891 | None:intergenic | 25.0% |
| ! | CATTTGAAAATGAAATGAAG+TGG | + | chr7.1:73248670-73248689 | MS.gene044959:CDS | 25.0% |
| ! | CTAGCTAGTGTAATTTATAT+TGG | + | chr7.1:73247870-73247889 | MS.gene044959:intron | 25.0% |
| ! | GAATGAATATAATACCATTG+AGG | + | chr7.1:73249037-73249056 | MS.gene044959:CDS | 25.0% |
| ! | GAGAACAATTCTTTACAAAT+CGG | - | chr7.1:73246595-73246614 | None:intergenic | 25.0% |
| ! | TAAAAGAACTCATTAACCAT+TGG | + | chr7.1:73246659-73246678 | MS.gene044959:intron | 25.0% |
| ! | TCATTCTTCGAAAGTAAATT+GGG | + | chr7.1:73248948-73248967 | MS.gene044959:CDS | 25.0% |
| ! | TGCGTTTATATAAGAAAAGA+AGG | - | chr7.1:73246545-73246564 | None:intergenic | 25.0% |
| !! | CTTCATTTCATTTTCAAATG+TGG | - | chr7.1:73248670-73248689 | None:intergenic | 25.0% |
| !! | TGGTTAATGAGTTCTTTTAA+AGG | - | chr7.1:73246658-73246677 | None:intergenic | 25.0% |
| !! | TTGTTTTCAATTTCAGTGTT+TGG | + | chr7.1:73247392-73247411 | MS.gene044959:intron | 25.0% |
| !!! | TATTGATTCAAAACTTACAC+CGG | + | chr7.1:73246334-73246353 | MS.gene044959:intron | 25.0% |
| !!! | TCAAGAACAAAGTATTGAAA+AGG | + | chr7.1:73248379-73248398 | MS.gene044959:CDS | 25.0% |
| !!! | TTTTTTTTACCTGATTAGGT+TGG | - | chr7.1:73249268-73249287 | None:intergenic | 25.0% |
| AACAATTCTTTACAAATCGG+AGG | - | chr7.1:73246592-73246611 | None:intergenic | 30.0% | |
| AACATTGGCACTATAATCAT+AGG | - | chr7.1:73247297-73247316 | None:intergenic | 30.0% | |
| AAGTTTAATTCTAACTTGGC+AGG | + | chr7.1:73248470-73248489 | MS.gene044959:intron | 30.0% | |
| ACAATAATGCATATCAGGAT+TGG | + | chr7.1:73248622-73248641 | MS.gene044959:CDS | 30.0% | |
| ACAATTCTTTACAAATCGGA+GGG | - | chr7.1:73246591-73246610 | None:intergenic | 30.0% | |
| ACATGAAGTTATATTACCAC+AGG | + | chr7.1:73247251-73247270 | MS.gene044959:intron | 30.0% | |
| ACCAAAGGATTTAAATTTGG+TGG | + | chr7.1:73248108-73248127 | MS.gene044959:CDS | 30.0% | |
| ACCACCAAATTTAAATCCTT+TGG | - | chr7.1:73248112-73248131 | None:intergenic | 30.0% | |
| ATAATACTTCTGCGGAAATT+TGG | + | chr7.1:73248306-73248325 | MS.gene044959:CDS | 30.0% | |
| ATCATTAGGCAACAAATTTG+TGG | + | chr7.1:73247524-73247543 | MS.gene044959:CDS | 30.0% | |
| CTCATTCTTCGAAAGTAAAT+TGG | + | chr7.1:73248947-73248966 | MS.gene044959:CDS | 30.0% | |
| GACTATGATCAATTGTACTA+TGG | + | chr7.1:73248017-73248036 | MS.gene044959:intron | 30.0% | |
| GATATACTTGCATTTGGTAA+AGG | - | chr7.1:73248543-73248562 | None:intergenic | 30.0% | |
| GATCATCCCAAAATATATTG+TGG | - | chr7.1:73248788-73248807 | None:intergenic | 30.0% | |
| GGATTGCATTATTCTTTATC+GGG | + | chr7.1:73247606-73247625 | MS.gene044959:CDS | 30.0% | |
| GTAAGAGATATACTTGCATT+TGG | - | chr7.1:73248549-73248568 | None:intergenic | 30.0% | |
| GTATATCTCTTACAATGAAG+AGG | + | chr7.1:73248556-73248575 | MS.gene044959:CDS | 30.0% | |
| TAATACTTCTGCGGAAATTT+GGG | + | chr7.1:73248307-73248326 | MS.gene044959:CDS | 30.0% | |
| TAGAAAGCTTACTTCAACAT+TGG | - | chr7.1:73247312-73247331 | None:intergenic | 30.0% | |
| TCTAATTCTGTGATCCATAT+TGG | - | chr7.1:73249236-73249255 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr7.1:73247753-73247772 | MS.gene044959:intron | 30.0% | |
| TTGTATGTATCAATGAAGCA+CGG | + | chr7.1:73246391-73246410 | MS.gene044959:intron | 30.0% | |
| TTTCGAAGAATGAGAAATGT+AGG | - | chr7.1:73248941-73248960 | None:intergenic | 30.0% | |
| ! | AATAATGCAATCCTTTTCGT+AGG | - | chr7.1:73247599-73247618 | None:intergenic | 30.0% |
| ! | ATGTGGTTGATTTCTACTAT+GGG | - | chr7.1:73247553-73247572 | None:intergenic | 30.0% |
| ! | CATAGATTTTGTATGAAGGA+CGG | + | chr7.1:73247649-73247668 | MS.gene044959:intron | 30.0% |
| ! | TAGAGGCCACAATATATTTT+GGG | + | chr7.1:73248779-73248798 | MS.gene044959:CDS | 30.0% |
| ! | TTAGAGGCCACAATATATTT+TGG | + | chr7.1:73248778-73248797 | MS.gene044959:CDS | 30.0% |
| !! | GTAACGTTGATAGCATAAAA+TGG | - | chr7.1:73246916-73246935 | None:intergenic | 30.0% |
| AAATCTCTTGGTTGTATTCG+TGG | + | chr7.1:73246686-73246705 | MS.gene044959:intron | 35.0% | |
| AACCATTCACAGAAAAGCAA+TGG | + | chr7.1:73248348-73248367 | MS.gene044959:CDS | 35.0% | |
| AATGAGGTTCACAACATTGA+CGG | + | chr7.1:73248996-73249015 | MS.gene044959:CDS | 35.0% | |
| AATTGTTGGTCCATGCTTAA+GGG | + | chr7.1:73248150-73248169 | MS.gene044959:CDS | 35.0% | |
| AGACCAAAATGGATACTTTG+AGG | + | chr7.1:73249562-73249581 | MS.gene044959:CDS | 35.0% | |
| ATCAGTTGATCAATGAATGG+GGG | + | chr7.1:73249516-73249535 | MS.gene044959:CDS | 35.0% | |
| ATCCTCAATACCAACCTTAT+TGG | + | chr7.1:73248805-73248824 | MS.gene044959:CDS | 35.0% | |
| ATGATTCCTCCATTATACTG+AGG | - | chr7.1:73247432-73247451 | None:intergenic | 35.0% | |
| ATGCCTACACAAATCATAAG+TGG | - | chr7.1:73249349-73249368 | None:intergenic | 35.0% | |
| ATTATAATGCCTTGAATCCC+AGG | - | chr7.1:73249410-73249429 | None:intergenic | 35.0% | |
| CAAATCCTATAACAACCTTG+CGG | - | chr7.1:73249449-73249468 | None:intergenic | 35.0% | |
| CAGAAGATTTACCTACGAAA+AGG | + | chr7.1:73247585-73247604 | MS.gene044959:CDS | 35.0% | |
| CATTCGTATCAACCTTCAAT+AGG | + | chr7.1:73248414-73248433 | MS.gene044959:intron | 35.0% | |
| CCTGAACAATAATGCATATC+AGG | + | chr7.1:73248617-73248636 | MS.gene044959:CDS | 35.0% | |
| CCTGATATGCATTATTGTTC+AGG | - | chr7.1:73248620-73248639 | None:intergenic | 35.0% | |
| CGATCAGTTGATCAATGAAT+GGG | + | chr7.1:73249514-73249533 | MS.gene044959:CDS | 35.0% | |
| CTTGAAACACGTACATTCTT+CGG | - | chr7.1:73247831-73247850 | None:intergenic | 35.0% | |
| GATCAGTTGATCAATGAATG+GGG | + | chr7.1:73249515-73249534 | MS.gene044959:CDS | 35.0% | |
| GTAGAGCAATAATACTTCTG+CGG | + | chr7.1:73248298-73248317 | MS.gene044959:intron | 35.0% | |
| TAACGATGCAGTCGAAAATA+GGG | + | chr7.1:73248854-73248873 | MS.gene044959:CDS | 35.0% | |
| TAATTGTTGGTCCATGCTTA+AGG | + | chr7.1:73248149-73248168 | MS.gene044959:CDS | 35.0% | |
| TACAAGGATGGACAACATTT+GGG | + | chr7.1:73247478-73247497 | MS.gene044959:CDS | 35.0% | |
| TATATCTACTGTCAGACGTT+CGG | - | chr7.1:73249297-73249316 | None:intergenic | 35.0% | |
| TCCATTGTGTCAAGATACAA+GGG | + | chr7.1:73248882-73248901 | MS.gene044959:CDS | 35.0% | |
| TCCTCAATACCAACCTTATT+GGG | + | chr7.1:73248806-73248825 | MS.gene044959:CDS | 35.0% | |
| TCGATCAGTTGATCAATGAA+TGG | + | chr7.1:73249513-73249532 | MS.gene044959:CDS | 35.0% | |
| TGCCTACACAAATCATAAGT+GGG | - | chr7.1:73249348-73249367 | None:intergenic | 35.0% | |
| TGTAGTCCATCATTCAATTC+TGG | - | chr7.1:73247462-73247481 | None:intergenic | 35.0% | |
| TTAACGATGCAGTCGAAAAT+AGG | + | chr7.1:73248853-73248872 | MS.gene044959:CDS | 35.0% | |
| TTAAGCATGGACCAACAATT+AGG | - | chr7.1:73248150-73248169 | None:intergenic | 35.0% | |
| TTAATAGGATACCTCGAAGT+AGG | - | chr7.1:73247034-73247053 | None:intergenic | 35.0% | |
| TTAGTAACCACGAAACTCTA+GGG | + | chr7.1:73246310-73246329 | MS.gene044959:intron | 35.0% | |
| TTATAATGCCTTGAATCCCA+GGG | - | chr7.1:73249409-73249428 | None:intergenic | 35.0% | |
| TTCAGCTAGGATGTTTAATG+AGG | + | chr7.1:73248980-73248999 | MS.gene044959:CDS | 35.0% | |
| TTCCATTGTGTCAAGATACA+AGG | + | chr7.1:73248881-73248900 | MS.gene044959:CDS | 35.0% | |
| TTGATCTTCTCGATATACCT+TGG | - | chr7.1:73249089-73249108 | None:intergenic | 35.0% | |
| ! | CAAACGTACTTTTACTTTGC+CGG | - | chr7.1:73246356-73246375 | None:intergenic | 35.0% |
| ! | CATGTGGTTGATTTCTACTA+TGG | - | chr7.1:73247554-73247573 | None:intergenic | 35.0% |
| ! | GGATTCAAGGCATTATAATG+TGG | + | chr7.1:73249411-73249430 | MS.gene044959:CDS | 35.0% |
| ! | TCTAGCACTCTCATTTTCAA+AGG | + | chr7.1:73247332-73247351 | MS.gene044959:intron | 35.0% |
| ! | TTCCCACTTATGATTTGTGT+AGG | + | chr7.1:73249343-73249362 | MS.gene044959:intron | 35.0% |
| ! | TTTTGTATGAAGGACGGATA+CGG | + | chr7.1:73247655-73247674 | MS.gene044959:intron | 35.0% |
| ! | TTTTTGCTGAGCCTAATTGT+TGG | + | chr7.1:73248136-73248155 | MS.gene044959:CDS | 35.0% |
| !! | AAACAAGGTATTGCTGTTAG+AGG | + | chr7.1:73248762-73248781 | MS.gene044959:CDS | 35.0% |
| !! | GAACTACTACTTTTCTCTTG+CGG | - | chr7.1:73248497-73248516 | None:intergenic | 35.0% |
| !! | GAATTGAATGATGGACTACA+AGG | + | chr7.1:73247462-73247481 | MS.gene044959:CDS | 35.0% |
| !! | TTGTTGATAGCACTTCCAAA+TGG | - | chr7.1:73248591-73248610 | None:intergenic | 35.0% |
| AATTTCAAGAACTTGCCTGC+AGG | + | chr7.1:73249482-73249501 | MS.gene044959:CDS | 40.0% | |
| ACAAGGATGGACAACATTTG+GGG | + | chr7.1:73247479-73247498 | MS.gene044959:CDS | 40.0% | |
| ACACGTACATTCTTCGGATT+AGG | - | chr7.1:73247825-73247844 | None:intergenic | 40.0% | |
| ACACTACACATGTCTGATAC+CGG | + | chr7.1:73247793-73247812 | MS.gene044959:intron | 40.0% | |
| ACCAAGAGATTTGACTCCAA+TGG | - | chr7.1:73246678-73246697 | None:intergenic | 40.0% | |
| ACCATCTCTACTATCCTCAA+TGG | - | chr7.1:73249054-73249073 | None:intergenic | 40.0% | |
| ACCATTGAGGATAGTAGAGA+TGG | + | chr7.1:73249050-73249069 | MS.gene044959:CDS | 40.0% | |
| ACCATTGGAGTCAAATCTCT+TGG | + | chr7.1:73246674-73246693 | MS.gene044959:intron | 40.0% | |
| ACCCTTGTATCTTGACACAA+TGG | - | chr7.1:73248886-73248905 | None:intergenic | 40.0% | |
| AGATACAAGGGTCAGCTTAT+TGG | + | chr7.1:73248894-73248913 | MS.gene044959:CDS | 40.0% | |
| ATCTCTTACAATGAAGAGGC+CGG | + | chr7.1:73248560-73248579 | MS.gene044959:CDS | 40.0% | |
| ATCTTCTCGATATACCTTGG+CGG | - | chr7.1:73249086-73249105 | None:intergenic | 40.0% | |
| ATGTATCAATGAAGCACGGA+CGG | + | chr7.1:73246395-73246414 | MS.gene044959:intron | 40.0% | |
| CAAAAGCCTCAGTATAATGG+AGG | + | chr7.1:73247423-73247442 | MS.gene044959:CDS | 40.0% | |
| CATTCACAGAAAAGCAATGG+AGG | + | chr7.1:73248351-73248370 | MS.gene044959:CDS | 40.0% | |
| CCACAAAAGCCTCAGTATAA+TGG | + | chr7.1:73247420-73247439 | MS.gene044959:CDS | 40.0% | |
| CTACAAGGATGGACAACATT+TGG | + | chr7.1:73247477-73247496 | MS.gene044959:CDS | 40.0% | |
| CTATGTGTCATCCTACTTTC+AGG | + | chr7.1:73246287-73246306 | MS.gene044959:CDS | 40.0% | |
| CTCAATAGAATCCTACTTCG+AGG | + | chr7.1:73247020-73247039 | MS.gene044959:intron | 40.0% | |
| GACAGTGAAGAAACCCAATA+AGG | - | chr7.1:73248822-73248841 | None:intergenic | 40.0% | |
| GCAAGTTAGGAGGACTATTA+GGG | - | chr7.1:73249169-73249188 | None:intergenic | 40.0% | |
| GCAGTGGTTAAAACAACCAA+AGG | + | chr7.1:73248093-73248112 | MS.gene044959:CDS | 40.0% | |
| GTGAAGAAACCCAATAAGGT+TGG | - | chr7.1:73248818-73248837 | None:intergenic | 40.0% | |
| GTGGTTACTAACCTGAAAGT+AGG | - | chr7.1:73246301-73246320 | None:intergenic | 40.0% | |
| GTTAGTAACCACGAAACTCT+AGG | + | chr7.1:73246309-73246328 | MS.gene044959:intron | 40.0% | |
| GTTCAAGCAGTTAACGAACA+AGG | + | chr7.1:73248513-73248532 | MS.gene044959:CDS | 40.0% | |
| TACACGAATGAATATGCGCA+AGG | + | chr7.1:73248693-73248712 | MS.gene044959:CDS | 40.0% | |
| TATAAGACCACCCTTAAGCA+TGG | - | chr7.1:73248163-73248182 | None:intergenic | 40.0% | |
| TCAATAACCCTAGAGTTTCG+TGG | - | chr7.1:73246320-73246339 | None:intergenic | 40.0% | |
| TTCTGTGAGACACTATCATG+TGG | - | chr7.1:73247570-73247589 | None:intergenic | 40.0% | |
| TTTGTAGTCGCCGTGAAAAA+GGG | - | chr7.1:73249591-73249610 | None:intergenic | 40.0% | |
| ! | CCATTATACTGAGGCTTTTG+TGG | - | chr7.1:73247423-73247442 | None:intergenic | 40.0% |
| ! | CTTTTCTGTGAATGGTTGCA+AGG | - | chr7.1:73248345-73248364 | None:intergenic | 40.0% |
| ! | GGTCTTATAGCAGATACAAC+AGG | + | chr7.1:73248174-73248193 | MS.gene044959:CDS | 40.0% |
| ! | TGGGACAAAACTTTTCAGCT+AGG | + | chr7.1:73248967-73248986 | MS.gene044959:CDS | 40.0% |
| ! | TGGTTTGAAACTATGCAGCT+TGG | + | chr7.1:73248037-73248056 | MS.gene044959:intron | 40.0% |
| ! | TTTTCACGGCGACTACAAAA+TGG | + | chr7.1:73249592-73249611 | MS.gene044959:CDS | 40.0% |
| ! | TTTTGTAGTCGCCGTGAAAA+AGG | - | chr7.1:73249592-73249611 | None:intergenic | 40.0% |
| !! | ACCCAATAAGGTTGGTATTG+AGG | - | chr7.1:73248810-73248829 | None:intergenic | 40.0% |
| !! | AGGCCTCAAAGTATCCATTT+TGG | - | chr7.1:73249568-73249587 | None:intergenic | 40.0% |
| !! | CTCCATTGCTTTTCTGTGAA+TGG | - | chr7.1:73248353-73248372 | None:intergenic | 40.0% |
| !! | GTCACGTGACTTTTGATTCT+AGG | + | chr7.1:73247941-73247960 | MS.gene044959:intron | 40.0% |
| !! | TACAAGTGTCGGTATCGTAT+CGG | + | chr7.1:73247764-73247783 | MS.gene044959:intron | 40.0% |
| !! | TGAATGATGGACTACAAGGA+TGG | + | chr7.1:73247466-73247485 | MS.gene044959:CDS | 40.0% |
| AAATGTTCCTGTCACAGCAG+TGG | + | chr7.1:73248077-73248096 | MS.gene044959:CDS | 45.0% | |
| ACAAGGGTCAGCTTATTGGT+TGG | + | chr7.1:73248898-73248917 | MS.gene044959:CDS | 45.0% | |
| AGCCAATTGCCTCTTGGAAT+TGG | + | chr7.1:73249128-73249147 | MS.gene044959:CDS | 45.0% | |
| CTAGGGTTTGCAGAGAAACA+AGG | + | chr7.1:73248747-73248766 | MS.gene044959:CDS | 45.0% | |
| CTCATGTAAGGCAAGTTAGG+AGG | - | chr7.1:73249179-73249198 | None:intergenic | 45.0% | |
| GACTCAAGTCCAATTCCAAG+AGG | - | chr7.1:73249140-73249159 | None:intergenic | 45.0% | |
| GATCCATATTGGCAAACCAG+TGG | - | chr7.1:73249225-73249244 | None:intergenic | 45.0% | |
| GCACTTCCAAATGGAAAACC+CGG | - | chr7.1:73248582-73248601 | None:intergenic | 45.0% | |
| GCATTATAATGTGGACAGCG+TGG | + | chr7.1:73249420-73249439 | MS.gene044959:CDS | 45.0% | |
| GCTCTCATGTAAGGCAAGTT+AGG | - | chr7.1:73249182-73249201 | None:intergenic | 45.0% | |
| GGCAAGTTAGGAGGACTATT+AGG | - | chr7.1:73249170-73249189 | None:intergenic | 45.0% | |
| GGGGGAGAGCAAATATATCA+GGG | + | chr7.1:73249534-73249553 | MS.gene044959:CDS | 45.0% | |
| GTAGGATGACACATAGCAGA+AGG | - | chr7.1:73246283-73246302 | None:intergenic | 45.0% | |
| GTCCAATTCCAAGAGGCAAT+TGG | - | chr7.1:73249133-73249152 | None:intergenic | 45.0% | |
| GTGAATAGCCAATTGCCTCT+TGG | + | chr7.1:73249122-73249141 | MS.gene044959:CDS | 45.0% | |
| GTTGTATTCGTGGAACGCTT+TGG | + | chr7.1:73246696-73246715 | MS.gene044959:intron | 45.0% | |
| TCAAGGGAAGCTCTCATGTA+AGG | - | chr7.1:73249191-73249210 | None:intergenic | 45.0% | |
| TCAGGGATGACAGACCAAAA+TGG | + | chr7.1:73249551-73249570 | MS.gene044959:CDS | 45.0% | |
| TCTCTTACAATGAAGAGGCC+GGG | + | chr7.1:73248561-73248580 | MS.gene044959:CDS | 45.0% | |
| TCTTCTCGATATACCTTGGC+GGG | - | chr7.1:73249085-73249104 | None:intergenic | 45.0% | |
| TGATCGACAATATCACCTGC+AGG | - | chr7.1:73249500-73249519 | None:intergenic | 45.0% | |
| TGCTTCAGCTTCAAAACCTG+TGG | - | chr7.1:73247270-73247289 | None:intergenic | 45.0% | |
| TGGGGGAGAGCAAATATATC+AGG | + | chr7.1:73249533-73249552 | MS.gene044959:CDS | 45.0% | |
| TTGACGCTGATGCAATGCTA+GGG | + | chr7.1:73248730-73248749 | MS.gene044959:CDS | 45.0% | |
| TTGGGTTTCTTCACTGTCAC+CGG | + | chr7.1:73248824-73248843 | MS.gene044959:CDS | 45.0% | |
| TTTCGACTGCATCGTTAAGC+TGG | - | chr7.1:73248851-73248870 | None:intergenic | 45.0% | |
| TTTGACGCTGATGCAATGCT+AGG | + | chr7.1:73248729-73248748 | MS.gene044959:CDS | 45.0% | |
| ! | AGCAGCTGAGCTCTATTTTG+AGG | + | chr7.1:73248197-73248216 | MS.gene044959:CDS | 45.0% |
| ! | CAAGGGTCAGCTTATTGGTT+GGG | + | chr7.1:73248899-73248918 | MS.gene044959:CDS | 45.0% |
| ! | TCTTCGGATTAGGTGTGTTC+CGG | - | chr7.1:73247815-73247834 | None:intergenic | 45.0% |
| !! | ATCAGGATTGGTTCGCATCT+AGG | + | chr7.1:73248634-73248653 | MS.gene044959:CDS | 45.0% |
| !! | GTTTTAACCACTGCTGTGAC+AGG | - | chr7.1:73248087-73248106 | None:intergenic | 45.0% |
| !! | TTTGAGGCCTCCCTTTTTCA+CGG | + | chr7.1:73249578-73249597 | MS.gene044959:CDS | 45.0% |
| !!! | TAATTATTTTTTCAATTAAT+AGG | - | chr7.1:73247049-73247068 | None:intergenic | 5.0% |
| ACTGCATCGTTAAGCTGGTC+CGG | - | chr7.1:73248846-73248865 | None:intergenic | 50.0% | |
| AGCTTGGATGCAAGTGAGTG+AGG | + | chr7.1:73248053-73248072 | MS.gene044959:intron | 50.0% | |
| ATGAAGGACGGATACGGACA+CGG | + | chr7.1:73247661-73247680 | MS.gene044959:intron | 50.0% | |
| ATGGTTTATCAACCCCGCCA+AGG | + | chr7.1:73249069-73249088 | MS.gene044959:CDS | 50.0% | |
| CATTCTCACCCTGGGATTCA+AGG | + | chr7.1:73249398-73249417 | MS.gene044959:CDS | 50.0% | |
| CTTCGAGCAGGTTCTTAGAG+AGG | + | chr7.1:73249373-73249392 | MS.gene044959:CDS | 50.0% | |
| CTTCTCGATATACCTTGGCG+GGG | - | chr7.1:73249084-73249103 | None:intergenic | 50.0% | |
| GGTCACCGCAAGGTTGTTAT+AGG | + | chr7.1:73249441-73249460 | MS.gene044959:CDS | 50.0% | |
| GTATTCGTGGAACGCTTTGG+TGG | + | chr7.1:73246699-73246718 | MS.gene044959:intron | 50.0% | |
| TGTTGGTCCATGCTTAAGGG+TGG | + | chr7.1:73248153-73248172 | MS.gene044959:CDS | 50.0% | |
| ! | AAGAGGCCGGGTTTTCCATT+TGG | + | chr7.1:73248573-73248592 | MS.gene044959:CDS | 50.0% |
| ! | CAATGAAGCACGGACGGATT+AGG | + | chr7.1:73246401-73246420 | MS.gene044959:intron | 50.0% |
| ! | GTAGGCATTGTACTTCGAGC+AGG | + | chr7.1:73249361-73249380 | MS.gene044959:intron | 50.0% |
| ! | TGTCGGTATCGTATCGGTGT+CGG | + | chr7.1:73247770-73247789 | MS.gene044959:intron | 50.0% |
| !! | AGTGGCTCGAAGGGTATCAA+GGG | - | chr7.1:73249207-73249226 | None:intergenic | 50.0% |
| !! | GAGCCACTGGTTTGCCAATA+TGG | + | chr7.1:73249219-73249238 | MS.gene044959:CDS | 50.0% |
| !! | TGTCGGTGTCATGTCGATGT+CGG | - | chr7.1:73246435-73246454 | None:intergenic | 50.0% |
| CGTCGCAAGCCAACCTAATC+AGG | + | chr7.1:73249256-73249275 | MS.gene044959:CDS | 55.0% | |
| CTTGATACCCTTCGAGCCAC+TGG | + | chr7.1:73249206-73249225 | MS.gene044959:CDS | 55.0% | |
| GTAGTCGCCGTGAAAAAGGG+AGG | - | chr7.1:73249588-73249607 | None:intergenic | 55.0% | |
| GTCAGTGTGCGTATCGTGTC+TGG | - | chr7.1:73247696-73247715 | None:intergenic | 55.0% | |
| TGGCAAACCAGTGGCTCGAA+GGG | - | chr7.1:73249216-73249235 | None:intergenic | 55.0% | |
| TTGGCAAACCAGTGGCTCGA+AGG | - | chr7.1:73249217-73249236 | None:intergenic | 55.0% | |
| ! | AGAGAGGCACATTCTCACCC+TGG | + | chr7.1:73249389-73249408 | MS.gene044959:CDS | 55.0% |
| ! | GAGAGGCACATTCTCACCCT+GGG | + | chr7.1:73249390-73249409 | MS.gene044959:CDS | 55.0% |
| !! | CAGTGGCTCGAAGGGTATCA+AGG | - | chr7.1:73249208-73249227 | None:intergenic | 55.0% |
| TGGACAGCGTGGTCACCGCA+AGG | + | chr7.1:73249431-73249450 | MS.gene044959:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 73246269 | 73249721 | 73246269 | ID=MS.gene044959 |
| chr7.1 | mRNA | 73246269 | 73249721 | 73246269 | ID=MS.gene044959.t1;Parent=MS.gene044959 |
| chr7.1 | exon | 73246269 | 73246308 | 73246269 | ID=MS.gene044959.t1.exon1;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73246269 | 73246308 | 73246269 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73247273 | 73247319 | 73247273 | ID=MS.gene044959.t1.exon2;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73247273 | 73247319 | 73247273 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73247408 | 73247627 | 73247408 | ID=MS.gene044959.t1.exon3;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73247408 | 73247627 | 73247408 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73248055 | 73248218 | 73248055 | ID=MS.gene044959.t1.exon4;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73248055 | 73248218 | 73248055 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73248302 | 73248400 | 73248302 | ID=MS.gene044959.t1.exon5;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73248302 | 73248400 | 73248302 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73248492 | 73249277 | 73248492 | ID=MS.gene044959.t1.exon6;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73248492 | 73249277 | 73248492 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| chr7.1 | exon | 73249365 | 73249721 | 73249365 | ID=MS.gene044959.t1.exon7;Parent=MS.gene044959.t1 |
| chr7.1 | CDS | 73249365 | 73249721 | 73249365 | ID=cds.MS.gene044959.t1;Parent=MS.gene044959.t1 |
| Gene Sequence |
| Protein sequence |
