Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009411.t1 | XP_024635709.1 | 99.3 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 4.00E-144 | 520.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009411.t1 | O04331 | 76.4 | 276 | 64 | 1 | 1 | 275 | 1 | 276 | 5.5e-110 | 398.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009411.t1 | B7FJH0 | 99.3 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 2.9e-144 | 520.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009411 | MS.gene063809 | PPI |
| MS.gene009411 | MS.gene80094 | PPI |
| MS.gene009411 | MS.gene91416 | PPI |
| MS.gene009411 | MS.gene016292 | PPI |
| MS.gene014181 | MS.gene009411 | PPI |
| MS.gene61084 | MS.gene009411 | PPI |
| MS.gene31416 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene68716 | PPI |
| MS.gene009411 | MS.gene56214 | PPI |
| MS.gene009411 | MS.gene88440 | PPI |
| MS.gene058374 | MS.gene009411 | PPI |
| MS.gene016544 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene024895 | PPI |
| MS.gene009411 | MS.gene058374 | PPI |
| MS.gene68113 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene055768 | PPI |
| MS.gene009411 | MS.gene066925 | PPI |
| MS.gene59884 | MS.gene009411 | PPI |
| MS.gene043467 | MS.gene009411 | PPI |
| MS.gene92318 | MS.gene009411 | PPI |
| MS.gene78840 | MS.gene009411 | PPI |
| MS.gene09764 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene063067 | PPI |
| MS.gene009411 | MS.gene015412 | PPI |
| MS.gene000128 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene067266 | PPI |
| MS.gene99648 | MS.gene009411 | PPI |
| MS.gene009411 | MS.gene59883 | PPI |
| MS.gene009411 | MS.gene028857 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009411.t1 | MTR_3g008250 | 99.281 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 0.0 | 560 |
| MS.gene009411.t1 | MTR_8g046300 | 89.130 | 276 | 29 | 1 | 1 | 275 | 1 | 276 | 0.0 | 504 |
| MS.gene009411.t1 | MTR_2g090760 | 51.429 | 280 | 128 | 4 | 3 | 278 | 11 | 286 | 3.19e-92 | 275 |
| MS.gene009411.t1 | MTR_4g078200 | 50.566 | 265 | 129 | 2 | 10 | 274 | 20 | 282 | 1.56e-88 | 265 |
| MS.gene009411.t1 | MTR_4g078200 | 54.338 | 219 | 98 | 2 | 56 | 274 | 5 | 221 | 7.01e-79 | 238 |
| MS.gene009411.t1 | MTR_5g093030 | 56.983 | 179 | 75 | 2 | 1 | 178 | 1 | 178 | 4.18e-62 | 194 |
| MS.gene009411.t1 | MTR_5g093040 | 61.538 | 117 | 35 | 1 | 1 | 117 | 2 | 108 | 3.78e-43 | 143 |
| MS.gene009411.t1 | MTR_6g004320 | 58.955 | 134 | 17 | 1 | 91 | 224 | 1 | 96 | 1.49e-41 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009411.t1 | AT5G40770 | 82.609 | 276 | 47 | 1 | 1 | 275 | 1 | 276 | 4.64e-171 | 474 |
| MS.gene009411.t1 | AT3G27280 | 80.645 | 279 | 53 | 1 | 1 | 278 | 1 | 279 | 6.78e-169 | 468 |
| MS.gene009411.t1 | AT3G27280 | 80.645 | 279 | 53 | 1 | 1 | 278 | 1 | 279 | 6.78e-169 | 468 |
| MS.gene009411.t1 | AT5G14300 | 66.171 | 269 | 64 | 2 | 11 | 278 | 4 | 246 | 1.41e-118 | 340 |
| MS.gene009411.t1 | AT1G03860 | 52.239 | 268 | 122 | 2 | 1 | 263 | 1 | 267 | 5.76e-92 | 274 |
| MS.gene009411.t1 | AT1G03860 | 52.239 | 268 | 122 | 2 | 1 | 263 | 1 | 267 | 5.76e-92 | 274 |
| MS.gene009411.t1 | AT4G28510 | 51.969 | 254 | 121 | 1 | 10 | 263 | 15 | 267 | 4.07e-89 | 266 |
| MS.gene009411.t1 | AT5G44140 | 52.157 | 255 | 121 | 1 | 10 | 264 | 15 | 268 | 8.48e-87 | 260 |
| MS.gene009411.t1 | AT2G20530 | 50.996 | 251 | 121 | 2 | 13 | 263 | 17 | 265 | 1.67e-85 | 257 |
| MS.gene009411.t1 | AT2G20530 | 50.996 | 251 | 121 | 2 | 13 | 263 | 17 | 265 | 1.67e-85 | 257 |
| MS.gene009411.t1 | AT1G03860 | 54.680 | 203 | 91 | 1 | 61 | 263 | 1 | 202 | 7.49e-74 | 225 |
Find 80 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGTTTCGGCTCTTGTT+AGG | 0.240010 | 3.4:-3462489 | MS.gene009411:CDS |
| CCTAATGTCTCTTACCTTCC+TGG | 0.262402 | 3.4:-3460796 | MS.gene009411:CDS |
| TACGGATAGGCCTCAGGTTT+CGG | 0.283193 | 3.4:-3462500 | MS.gene009411:CDS |
| TCTGATGCTACTGCTGTTGC+TGG | 0.297902 | 3.4:-3460886 | MS.gene009411:CDS |
| TTAGGAGGATTGAGGCTTCC+AGG | 0.308845 | 3.4:-3460846 | MS.gene009411:CDS |
| ATTCACCATCTGAAGATCTT+TGG | 0.335078 | 3.4:+3464824 | None:intergenic |
| GTAGGAAGACGTTGAGTATC+AGG | 0.347514 | 3.4:+3464777 | None:intergenic |
| TGCTACTGCTGTTGCTGGTA+TGG | 0.357125 | 3.4:-3460881 | MS.gene009411:CDS |
| GCTACTGCTGTTGCTGGTAT+GGG | 0.368570 | 3.4:-3460880 | MS.gene009411:CDS |
| GCTATTACTCATTTGTCATA+TGG | 0.377706 | 3.4:-3462415 | MS.gene009411:CDS |
| AACCTCGCACGCGTCGCATT+CGG | 0.385015 | 3.4:-3465047 | MS.gene009411:CDS |
| GCACGCGTCGCATTCGGTCT+CGG | 0.405011 | 3.4:-3465041 | MS.gene009411:CDS |
| CAGGGAAATTGCCGCTACTT+TGG | 0.409034 | 3.4:-3460827 | MS.gene009411:CDS |
| TGTTGTGATGAAGGCGGAAC+AGG | 0.423261 | 3.4:-3460965 | MS.gene009411:CDS |
| GTATGGGGTTGATTGAGCTT+AGG | 0.424876 | 3.4:-3460864 | MS.gene009411:CDS |
| AGTTCCTTCACCAACTGATT+CGG | 0.429613 | 3.4:+3464929 | None:intergenic |
| CCAGGAAGGTAAGAGACATT+AGG | 0.436894 | 3.4:+3460796 | None:intergenic |
| TAATGCTGATCAGCTTCTTA+CGG | 0.440478 | 3.4:-3462518 | MS.gene009411:CDS |
| TGCTGCTTGATTGCTTCCCA+TGG | 0.442091 | 3.4:+3465082 | None:intergenic |
| TCAGGTTTCGGCTCTTGTTA+GGG | 0.442315 | 3.4:-3462488 | MS.gene009411:CDS |
| CCGAGATTCTGAACAATAGT+AGG | 0.443468 | 3.4:+3464759 | None:intergenic |
| CCTACTATTGTTCAGAATCT+CGG | 0.444298 | 3.4:-3464759 | MS.gene009411:CDS |
| AGAGGAGTTGACGGCGGTTG+CGG | 0.445413 | 3.4:+3465013 | None:intergenic |
| GTCTAAGTTTGTTGTGATGA+AGG | 0.448310 | 3.4:-3460974 | MS.gene009411:CDS |
| GTAATGATATTACCGATTGA+AGG | 0.458986 | 3.4:+3464711 | None:intergenic |
| GCTTCTTACGGATAGGCCTC+AGG | 0.461424 | 3.4:-3462506 | MS.gene009411:CDS |
| CACACATTCTCATCAATCTC+TGG | 0.473261 | 3.4:-3464849 | MS.gene009411:CDS |
| TGGGGTTGATTGAGCTTAGG+AGG | 0.474046 | 3.4:-3460861 | MS.gene009411:CDS |
| GGCGCGTTGGCCACCGTCGA+CGG | 0.487014 | 3.4:+3464983 | None:intergenic |
| GAAGCAGGTGGCACAGCAAG+AGG | 0.501217 | 3.4:-3461004 | MS.gene009411:CDS |
| ACAACTCTTAACAGGTAATG+AGG | 0.502279 | 3.4:-3462566 | MS.gene009411:intron |
| GTCCTCTTCGACAGATTTCG+CGG | 0.514877 | 3.4:-3464960 | MS.gene009411:CDS |
| GATTGAGCTTAGGAGGATTG+AGG | 0.519488 | 3.4:-3460854 | MS.gene009411:CDS |
| TAGGGATAGTCTTGTGAGAA+GGG | 0.523460 | 3.4:-3462470 | MS.gene009411:CDS |
| GAACTCATTTCCTCATCCCA+TGG | 0.525793 | 3.4:-3464911 | MS.gene009411:CDS |
| GAGAAGGTTCTTCCTTCAAT+CGG | 0.527364 | 3.4:-3464723 | MS.gene009411:intron |
| CAAAGTAGCGGCAATTTCCC+TGG | 0.531408 | 3.4:+3460828 | None:intergenic |
| CATATGGTGGTGAATTCTCT+AGG | 0.533003 | 3.4:-3462399 | MS.gene009411:intron |
| TTAGGGATAGTCTTGTGAGA+AGG | 0.533036 | 3.4:-3462471 | MS.gene009411:CDS |
| AAGTAGAATATTGAAATCCT+TGG | 0.533739 | 3.4:+3462447 | None:intergenic |
| TGCTGCGATCATCCGTGCTG+AGG | 0.540308 | 3.4:-3460935 | MS.gene009411:CDS |
| CAGGGCTGTTGAGCAGAAGC+AGG | 0.541558 | 3.4:-3461019 | MS.gene009411:CDS |
| TAGGAGGATTGAGGCTTCCA+GGG | 0.548350 | 3.4:-3460845 | MS.gene009411:CDS |
| GGAGTTGACGGCGGTTGCGG+CGG | 0.549095 | 3.4:+3465016 | None:intergenic |
| GTAAGAGACATTAGGAGACT+TGG | 0.549961 | 3.4:+3460804 | None:intergenic |
| AACTCATTTCCTCATCCCAT+GGG | 0.550217 | 3.4:-3464910 | MS.gene009411:CDS |
| GCTGCGATCATCCGTGCTGA+GGG | 0.565939 | 3.4:-3460934 | MS.gene009411:CDS |
| ATGAGCATGTTCTTTCCACC+AGG | 0.569837 | 3.4:+3460778 | None:intergenic |
| CTACTGCTGTTGCTGGTATG+GGG | 0.570866 | 3.4:-3460879 | MS.gene009411:CDS |
| GGCATCCTTTCCGAATCAGT+TGG | 0.571180 | 3.4:-3464939 | MS.gene009411:CDS |
| GGTGTAGAGAGAGGAGTTGA+CGG | 0.577010 | 3.4:+3465004 | None:intergenic |
| CGACGCGTGCGAGGTTTGAG+AGG | 0.584250 | 3.4:+3465054 | None:intergenic |
| TCCTCTCTCTACACCGTCGA+CGG | 0.584609 | 3.4:-3464996 | MS.gene009411:CDS |
| GACCGAATGCGACGCGTGCG+AGG | 0.589146 | 3.4:+3465045 | None:intergenic |
| GCGAAATCTGTCGAAGAGGA+CGG | 0.590193 | 3.4:+3464962 | None:intergenic |
| TGGTGGAAAGAACATGCTCA+TGG | 0.590341 | 3.4:-3460776 | MS.gene009411:CDS |
| CTGATCAGCTTCTTACGGAT+AGG | 0.590505 | 3.4:-3462513 | MS.gene009411:CDS |
| TGTCGAAGAGGACGGCGCGT+TGG | 0.593060 | 3.4:+3464970 | None:intergenic |
| TAGTCTTGTGAGAAGGGCCA+AGG | 0.601437 | 3.4:-3462464 | MS.gene009411:CDS |
| GCATGTTCTTTCCACCAGGA+AGG | 0.602806 | 3.4:+3460782 | None:intergenic |
| CGGTCTTGAATATGACGAGA+AGG | 0.603923 | 3.4:-3464739 | MS.gene009411:CDS |
| GTGCGGATATCGAAGACGTA+AGG | 0.605844 | 3.4:+3464879 | None:intergenic |
| ATTACTCATTTGTCATATGG+TGG | 0.611449 | 3.4:-3462412 | MS.gene009411:CDS |
| CTTCACCAACTGATTCGGAA+AGG | 0.611882 | 3.4:+3464934 | None:intergenic |
| CTTTCCGAATCAGTTGGTGA+AGG | 0.612169 | 3.4:-3464933 | MS.gene009411:CDS |
| GGCTGTTGAGCAGAAGCAGG+TGG | 0.617512 | 3.4:-3461016 | MS.gene009411:CDS |
| AGGAGACTTGGCCAAAGTAG+CGG | 0.624726 | 3.4:+3460816 | None:intergenic |
| CATCACTTTCTCCCTCAGCA+CGG | 0.638713 | 3.4:+3460923 | None:intergenic |
| TGGTACCAAAGATCTTCAGA+TGG | 0.642264 | 3.4:-3464829 | MS.gene009411:CDS |
| ACCGTCGACGGTGTAGAGAG+AGG | 0.647102 | 3.4:+3464995 | None:intergenic |
| TCTCTCTACACCGTCGACGG+TGG | 0.651078 | 3.4:-3464993 | MS.gene009411:CDS |
| TGCCGCGAAATCTGTCGAAG+AGG | 0.655098 | 3.4:+3464958 | None:intergenic |
| GATTACCCTCATCAACGTGA+AGG | 0.656755 | 3.4:+3460745 | None:intergenic |
| TGGCACAGCAAGAGGCAGAG+AGG | 0.662475 | 3.4:-3460996 | MS.gene009411:CDS |
| AATGTCTCTTACCTTCCTGG+TGG | 0.667494 | 3.4:-3460793 | MS.gene009411:CDS |
| TAAGTTTGTTGTGATGAAGG+CGG | 0.672014 | 3.4:-3460971 | MS.gene009411:CDS |
| CTAACAAGAGCCGAAACCTG+AGG | 0.700849 | 3.4:+3462490 | None:intergenic |
| GAGATTGATGAGAATGTGTG+AGG | 0.741623 | 3.4:+3464852 | None:intergenic |
| GTAGAGAGAGGAGTTGACGG+CGG | 0.788568 | 3.4:+3465007 | None:intergenic |
| AGAATGTGTGAGGACGAGTG+CGG | 0.814249 | 3.4:+3464862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATATTTTTTTAATTA+AGG | + | chr3.4:3461536-3461555 | None:intergenic | 0.0% |
| !! | AATAAAGTAATACAAAAAAA+TGG | + | chr3.4:3462318-3462337 | None:intergenic | 10.0% |
| !! | GAAAAAATAATAAATAGTTA+AGG | - | chr3.4:3461809-3461828 | MS.gene009411:intron | 10.0% |
| !! | TAAAAAAAATCTAAATACTA+TGG | + | chr3.4:3464161-3464180 | None:intergenic | 10.0% |
| !! | TTTATGATATATTAAATCAA+TGG | + | chr3.4:3462360-3462379 | None:intergenic | 10.0% |
| !!! | AAACTAAATGATTTTATAAT+AGG | - | chr3.4:3462204-3462223 | MS.gene009411:intron | 10.0% |
| !!! | AACTAAATGATTTTATAATA+GGG | - | chr3.4:3462205-3462224 | MS.gene009411:intron | 10.0% |
| !!! | ATTATAAAATCATTTAGTTT+TGG | + | chr3.4:3462204-3462223 | None:intergenic | 10.0% |
| !!! | TTTGATTTCAAAAAAAAATT+GGG | + | chr3.4:3462651-3462670 | None:intergenic | 10.0% |
| !!! | TTTTATATCAAAAATAAGTT+GGG | + | chr3.4:3462086-3462105 | None:intergenic | 10.0% |
| !! | AAAAAAACATATTTAAACCT+AGG | - | chr3.4:3463183-3463202 | MS.gene009411:intron | 15.0% |
| !! | AATTAAAAATATTGGTAAGT+TGG | + | chr3.4:3464578-3464597 | None:intergenic | 15.0% |
| !! | ATTAAAAAATTGTTGTGTTT+AGG | - | chr3.4:3461348-3461367 | MS.gene009411:intron | 15.0% |
| !! | ATTTAAAAATCATAAAGTGT+CGG | + | chr3.4:3464387-3464406 | None:intergenic | 15.0% |
| !! | GTTCTTGAAATTAAAAATAT+TGG | + | chr3.4:3464586-3464605 | None:intergenic | 15.0% |
| !! | TAAAGAAATTGAATTAGTTA+TGG | - | chr3.4:3463560-3463579 | MS.gene009411:intron | 15.0% |
| !! | TCATTTGATTAAATTAGAAA+AGG | - | chr3.4:3463938-3463957 | MS.gene009411:intron | 15.0% |
| !! | TCTTCTTGATATTAAAAAAA+TGG | + | chr3.4:3464415-3464434 | None:intergenic | 15.0% |
| !! | TTAAAAAATTGTTGTGTTTA+GGG | - | chr3.4:3461349-3461368 | MS.gene009411:intron | 15.0% |
| !! | TTGTAAAAAAAAATCACATT+TGG | - | chr3.4:3463718-3463737 | MS.gene009411:intron | 15.0% |
| !!! | AACTTTTAAAAAAAACTGTT+TGG | - | chr3.4:3462848-3462867 | MS.gene009411:intron | 15.0% |
| !!! | ATTTTTTTAATTAAGGCTAA+AGG | + | chr3.4:3461529-3461548 | None:intergenic | 15.0% |
| !!! | CAATTGTTTTGTAATTTATA+GGG | - | chr3.4:3463121-3463140 | MS.gene009411:intron | 15.0% |
| !!! | CTTTTATATCAAAAATAAGT+TGG | + | chr3.4:3462087-3462106 | None:intergenic | 15.0% |
| !!! | GTTTGATTTCAAAAAAAAAT+TGG | + | chr3.4:3462652-3462671 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTAAGGCTAAA+GGG | + | chr3.4:3461528-3461547 | None:intergenic | 15.0% |
| !! | AATTTCAAGAACTAACTTAT+TGG | - | chr3.4:3464594-3464613 | MS.gene009411:intron | 20.0% |
| !! | ATAGTGTTTACTAAATTTAG+CGG | + | chr3.4:3461603-3461622 | None:intergenic | 20.0% |
| !! | CAAAAAAAGTTAAAGTTGTT+TGG | - | chr3.4:3462142-3462161 | MS.gene009411:intron | 20.0% |
| !! | TGCAATTAAAGTTAAATACA+AGG | - | chr3.4:3462113-3462132 | MS.gene009411:intron | 20.0% |
| !! | TTGAATGTAACTTAATATGT+CGG | - | chr3.4:3464044-3464063 | MS.gene009411:intron | 20.0% |
| !!! | AAGAAACAATTCACTTTTTT+TGG | - | chr3.4:3461179-3461198 | MS.gene009411:intron | 20.0% |
| !!! | ATTTGTTTGTTTAAGATTCA+GGG | - | chr3.4:3463583-3463602 | MS.gene009411:intron | 20.0% |
| !!! | GATATATGAAGCTTTTTTTA+TGG | + | chr3.4:3462772-3462791 | None:intergenic | 20.0% |
| !!! | GCAATTGTTTTGTAATTTAT+AGG | - | chr3.4:3463120-3463139 | MS.gene009411:intron | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | - | chr3.4:3461273-3461292 | MS.gene009411:intron | 20.0% |
| !!! | GTGAATTGTTTCTTATAATA+AGG | + | chr3.4:3461173-3461192 | None:intergenic | 20.0% |
| !!! | TAAATAGTTAAGGGTATAAT+AGG | - | chr3.4:3461819-3461838 | MS.gene009411:intron | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr3.4:3461268-3461287 | None:intergenic | 20.0% |
| ! | AAGTAACATTAATGCTTCAT+TGG | - | chr3.4:3461844-3461863 | MS.gene009411:intron | 25.0% |
| ! | AAGTAGAATATTGAAATCCT+TGG | + | chr3.4:3463392-3463411 | None:intergenic | 25.0% |
| ! | AATTACTCTTTCCAATGAAA+TGG | + | chr3.4:3461754-3461773 | None:intergenic | 25.0% |
| ! | AGAAAAGTCTAAATTAAGCT+GGG | - | chr3.4:3462893-3462912 | MS.gene009411:intron | 25.0% |
| ! | CATATAAGATTTATCATCCT+AGG | + | chr3.4:3463203-3463222 | None:intergenic | 25.0% |
| ! | GTCAAAAGGACTTATAATTT+GGG | + | chr3.4:3461732-3461751 | None:intergenic | 25.0% |
| ! | TAAATTTGACAACTCTTAAC+AGG | - | chr3.4:3463262-3463281 | MS.gene009411:intron | 25.0% |
| ! | TACTCCTTAAAAGATAAGTA+GGG | + | chr3.4:3462874-3462893 | None:intergenic | 25.0% |
| ! | TAGAAAAGTCTAAATTAAGC+TGG | - | chr3.4:3462892-3462911 | MS.gene009411:intron | 25.0% |
| ! | TATAAGCTCAAATATGTTGT+TGG | + | chr3.4:3461383-3461402 | None:intergenic | 25.0% |
| ! | TCAGATAAATTTGTAGTGTT+TGG | - | chr3.4:3461947-3461966 | MS.gene009411:intron | 25.0% |
| ! | TGTAAAGTGACTTATACTTT+GGG | - | chr3.4:3461870-3461889 | MS.gene009411:intron | 25.0% |
| ! | TTGTAAAGTGACTTATACTT+TGG | - | chr3.4:3461869-3461888 | MS.gene009411:intron | 25.0% |
| !! | ATTTTTCCAATTAAGATTGC+AGG | - | chr3.4:3461988-3462007 | MS.gene009411:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | - | chr3.4:3461278-3461297 | MS.gene009411:intron | 25.0% |
| !! | GATTTGTTTGTTTAAGATTC+AGG | - | chr3.4:3463582-3463601 | MS.gene009411:intron | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+AGG | + | chr3.4:3461168-3461187 | None:intergenic | 25.0% |
| !! | TTTAGAGCGACTTATAATTT+GGG | - | chr3.4:3461905-3461924 | MS.gene009411:intron | 25.0% |
| !! | TTTTTCCAATTAAGATTGCA+GGG | - | chr3.4:3461989-3462008 | MS.gene009411:intron | 25.0% |
| !!! | TTTCTTTCTCTTTTGTTTCT+TGG | - | chr3.4:3463464-3463483 | MS.gene009411:intron | 25.0% |
| !!! | TTTTTTTTTGAAGGAGTCAT+TGG | + | chr3.4:3462515-3462534 | None:intergenic | 25.0% |
| AGCTAACTAATAGCTTATAG+TGG | - | chr3.4:3461663-3461682 | MS.gene009411:intron | 30.0% | |
| ATTACTCATTTGTCATATGG+TGG | - | chr3.4:3463424-3463443 | MS.gene009411:intron | 30.0% | |
| CTACTCCTTAAAAGATAAGT+AGG | + | chr3.4:3462875-3462894 | None:intergenic | 30.0% | |
| CTCTTAATTTACTCGTTAAC+TGG | - | chr3.4:3464714-3464733 | MS.gene009411:intron | 30.0% | |
| GAAGACAAGAACTAACTTAA+TGG | - | chr3.4:3464430-3464449 | MS.gene009411:intron | 30.0% | |
| GCTATTACTCATTTGTCATA+TGG | - | chr3.4:3463421-3463440 | MS.gene009411:intron | 30.0% | |
| GCTTCAAATACAATACAATC+TGG | - | chr3.4:3463804-3463823 | MS.gene009411:intron | 30.0% | |
| GGTCAAAAGGACTTATAATT+TGG | + | chr3.4:3461733-3461752 | None:intergenic | 30.0% | |
| GGTGATATATAGACTATATG+AGG | - | chr3.4:3464100-3464119 | MS.gene009411:intron | 30.0% | |
| GTAAAGTGACTTATACTTTG+GGG | - | chr3.4:3461871-3461890 | MS.gene009411:intron | 30.0% | |
| GTAATTTATAGGGACTGAAT+AGG | - | chr3.4:3463131-3463150 | MS.gene009411:intron | 30.0% | |
| TAAGCTTATACCTTATAAGC+TGG | + | chr3.4:3463030-3463049 | None:intergenic | 30.0% | |
| TATAGTCATACCAGCTTATA+AGG | - | chr3.4:3463017-3463036 | MS.gene009411:intron | 30.0% | |
| TATAGTGAGTTAGCATAGTT+AGG | + | chr3.4:3464493-3464512 | None:intergenic | 30.0% | |
| TATGGCACTATACAATTTCA+AGG | + | chr3.4:3464143-3464162 | None:intergenic | 30.0% | |
| TCTATATATCACCAACACTA+AGG | + | chr3.4:3464093-3464112 | None:intergenic | 30.0% | |
| TTCCATGATTCAAAACAAAC+AGG | + | chr3.4:3463609-3463628 | None:intergenic | 30.0% | |
| TTCTTATAATAAGGACAGGA+GGG | + | chr3.4:3461164-3461183 | None:intergenic | 30.0% | |
| TTGAATCATGGAAGTGATTA+TGG | - | chr3.4:3463616-3463635 | MS.gene009411:intron | 30.0% | |
| TTGATTCATGAGTAATCCTT+GGG | - | chr3.4:3464279-3464298 | MS.gene009411:intron | 30.0% | |
| TTTCCAATGAAATGGTCAAA+AGG | + | chr3.4:3461746-3461765 | None:intergenic | 30.0% | |
| TTTCTTATAATAAGGACAGG+AGG | + | chr3.4:3461165-3461184 | None:intergenic | 30.0% | |
| TTTGATTCATGAGTAATCCT+TGG | - | chr3.4:3464278-3464297 | MS.gene009411:intron | 30.0% | |
| ! | CAAGTAACTTGTCATTAATG+TGG | - | chr3.4:3463236-3463255 | MS.gene009411:intron | 30.0% |
| ! | GCTTATTTCTTACTAGCTTA+TGG | - | chr3.4:3461463-3461482 | MS.gene009411:intron | 30.0% |
| ! | GTAATGATATTACCGATTGA+AGG | + | chr3.4:3461128-3461147 | None:intergenic | 30.0% |
| ! | TTTTCCAATTAAGATTGCAG+GGG | - | chr3.4:3461990-3462009 | MS.gene009411:intron | 30.0% |
| !! | AATATTGGTAAGTTGGTTCT+AGG | + | chr3.4:3464571-3464590 | None:intergenic | 30.0% |
| !! | CTTTAGAGCGACTTATAATT+TGG | - | chr3.4:3461904-3461923 | MS.gene009411:intron | 30.0% |
| !! | TGATTTGCTACTCAAATGTA+TGG | + | chr3.4:3464215-3464234 | None:intergenic | 30.0% |
| AAGCTTGTGACAAATCAAAC+AGG | + | chr3.4:3461440-3461459 | None:intergenic | 35.0% | |
| ACAACTCTTAACAGGTAATG+AGG | - | chr3.4:3463270-3463289 | MS.gene009411:intron | 35.0% | |
| ACAATTTCAAGGACCGAAAT+TGG | + | chr3.4:3464132-3464151 | None:intergenic | 35.0% | |
| AGATAGACTAAGGCTATGTT+TGG | + | chr3.4:3462919-3462938 | None:intergenic | 35.0% | |
| AGCTATAAGCTACTTGAGTT+AGG | - | chr3.4:3462050-3462069 | MS.gene009411:intron | 35.0% | |
| ATTCACCATCTGAAGATCTT+TGG | + | chr3.4:3461015-3461034 | None:intergenic | 35.0% | |
| CAAAATAAGCTGCAACAAAC+AGG | + | chr3.4:3463701-3463720 | None:intergenic | 35.0% | |
| CATTTGAGTAGCAAATCAAG+AGG | - | chr3.4:3464217-3464236 | MS.gene009411:intron | 35.0% | |
| CCTACTATTGTTCAGAATCT+CGG | - | chr3.4:3461077-3461096 | MS.gene009411:intron | 35.0% | |
| CTTATCCACTCTTAGCAATA+AGG | - | chr3.4:3461639-3461658 | MS.gene009411:intron | 35.0% | |
| TAATGCTGATCAGCTTCTTA+CGG | - | chr3.4:3463318-3463337 | MS.gene009411:intron | 35.0% | |
| TACAGAGAATCAGAACAGAA+AGG | + | chr3.4:3464786-3464805 | None:intergenic | 35.0% | |
| TATGAGGCAATCTCCAATTT+CGG | - | chr3.4:3464116-3464135 | MS.gene009411:intron | 35.0% | |
| TCTGTTACAGTTAGCTAGTA+TGG | + | chr3.4:3464674-3464693 | None:intergenic | 35.0% | |
| TGACTATAAAAGACCCTGTT+TGG | + | chr3.4:3463005-3463024 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr3.4:3461282-3461301 | MS.gene009411:intron | 35.0% | |
| TTTACCCCTGCAATCTTAAT+TGG | + | chr3.4:3461997-3462016 | None:intergenic | 35.0% | |
| TTTATAAGTTGTACTCCCTC+CGG | + | chr3.4:3461300-3461319 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr3.4:3461281-3461300 | MS.gene009411:intron | 35.0% | |
| ! | ACTGCTAAACTAGCTTATTG+CGG | - | chr3.4:3461689-3461708 | MS.gene009411:intron | 35.0% |
| ! | AGTCCTTTTGACCATTTCAT+TGG | - | chr3.4:3461740-3461759 | MS.gene009411:intron | 35.0% |
| ! | CAAAAATAAGTTGGGCCAAA+CGG | + | chr3.4:3462078-3462097 | None:intergenic | 35.0% |
| ! | GACTTATAATTTGGGACTGA+GGG | - | chr3.4:3461913-3461932 | MS.gene009411:intron | 35.0% |
| ! | TTGGCCCTACTTATCTTTTA+AGG | - | chr3.4:3462867-3462886 | MS.gene009411:intron | 35.0% |
| !! | GTCTAAGTTTGTTGTGATGA+AGG | - | chr3.4:3464862-3464881 | MS.gene009411:CDS | 35.0% |
| !! | TAAGTTTGTTGTGATGAAGG+CGG | - | chr3.4:3464865-3464884 | MS.gene009411:CDS | 35.0% |
| !!! | TATTGGTGCCTGTTGTTTTA+GGG | - | chr3.4:3464611-3464630 | MS.gene009411:intron | 35.0% |
| !!! | TTAATGGTGCCTGTTGTTTT+AGG | - | chr3.4:3464446-3464465 | MS.gene009411:intron | 35.0% |
| !!! | TTATTGGTGCCTGTTGTTTT+AGG | - | chr3.4:3464610-3464629 | MS.gene009411:intron | 35.0% |
| AACCCAACAAGCTAACATCA+GGG | - | chr3.4:3463090-3463109 | MS.gene009411:intron | 40.0% | |
| AACTCATTTCCTCATCCCAT+GGG | - | chr3.4:3460926-3460945 | MS.gene009411:CDS | 40.0% | |
| AACTTGGTCCCTAAAACAAC+AGG | + | chr3.4:3464622-3464641 | None:intergenic | 40.0% | |
| ACAGTTACCAAACACCAAAC+AGG | - | chr3.4:3462988-3463007 | MS.gene009411:intron | 40.0% | |
| ACTTGCGAACGTGTAACAAA+CGG | - | chr3.4:3464018-3464037 | MS.gene009411:intron | 40.0% | |
| ACTTGGTCACCTAAAACAAC+AGG | + | chr3.4:3464458-3464477 | None:intergenic | 40.0% | |
| AGCTACCTTATTGCTAAGAG+TGG | + | chr3.4:3461647-3461666 | None:intergenic | 40.0% | |
| AGTTCCTTCACCAACTGATT+CGG | + | chr3.4:3460910-3460929 | None:intergenic | 40.0% | |
| CACACATTCTCATCAATCTC+TGG | - | chr3.4:3460987-3461006 | MS.gene009411:CDS | 40.0% | |
| CAGTTACCAAACACCAAACA+GGG | - | chr3.4:3462989-3463008 | MS.gene009411:intron | 40.0% | |
| CCGAGATTCTGAACAATAGT+AGG | + | chr3.4:3461080-3461099 | None:intergenic | 40.0% | |
| CTCTGTACGATCCAATATCA+GGG | - | chr3.4:3464799-3464818 | MS.gene009411:CDS | 40.0% | |
| GAGAAGGTTCTTCCTTCAAT+CGG | - | chr3.4:3461113-3461132 | MS.gene009411:intron | 40.0% | |
| GAGATTGATGAGAATGTGTG+AGG | + | chr3.4:3460987-3461006 | None:intergenic | 40.0% | |
| GTAAGAGACATTAGGAGACT+TGG | + | chr3.4:3465035-3465054 | None:intergenic | 40.0% | |
| TCTCTGTACGATCCAATATC+AGG | - | chr3.4:3464798-3464817 | MS.gene009411:CDS | 40.0% | |
| TGGTACCAAAGATCTTCAGA+TGG | - | chr3.4:3461007-3461026 | MS.gene009411:CDS | 40.0% | |
| TTACGAGCGAATGCTAAACT+TGG | + | chr3.4:3464638-3464657 | None:intergenic | 40.0% | |
| TTAGGAGTGAAAGCTCAACT+TGG | + | chr3.4:3464475-3464494 | None:intergenic | 40.0% | |
| ! | CATATGGTGGTGAATTCTCT+AGG | - | chr3.4:3463437-3463456 | MS.gene009411:intron | 40.0% |
| ! | CGACTTATAATTTGGGACTG+AGG | - | chr3.4:3461912-3461931 | MS.gene009411:intron | 40.0% |
| ! | TACTTGAGTTAGGTACCGTT+TGG | - | chr3.4:3462060-3462079 | MS.gene009411:intron | 40.0% |
| ! | TCGCGCTTTTAGATAGACTA+AGG | + | chr3.4:3462929-3462948 | None:intergenic | 40.0% |
| ! | TGTGTGTAAAGCTAGCTTCT+TGG | + | chr3.4:3462802-3462821 | None:intergenic | 40.0% |
| !! | AAAAGACCCTGTTTGGTGTT+TGG | + | chr3.4:3462998-3463017 | None:intergenic | 40.0% |
| !! | TAGGGATAGTCTTGTGAGAA+GGG | - | chr3.4:3463366-3463385 | MS.gene009411:intron | 40.0% |
| !! | TGTTAGCTTGTTGGGTTGTA+TGG | + | chr3.4:3463087-3463106 | None:intergenic | 40.0% |
| !! | TTAATATGTCGGTGTCGTGT+TGG | - | chr3.4:3464055-3464074 | MS.gene009411:intron | 40.0% |
| !! | TTAGGGATAGTCTTGTGAGA+AGG | - | chr3.4:3463365-3463384 | MS.gene009411:intron | 40.0% |
| !!! | GGCCTGTTTGTTTTGAATCA+TGG | - | chr3.4:3463604-3463623 | MS.gene009411:intron | 40.0% |
| AATGTCTCTTACCTTCCTGG+TGG | - | chr3.4:3465043-3465062 | MS.gene009411:CDS | 45.0% | |
| ACCCAACAAGCTAACATCAG+GGG | - | chr3.4:3463091-3463110 | MS.gene009411:intron | 45.0% | |
| ATGAGCATGTTCTTTCCACC+AGG | + | chr3.4:3465061-3465080 | None:intergenic | 45.0% | |
| CAACCCAACAAGCTAACATC+AGG | - | chr3.4:3463089-3463108 | MS.gene009411:intron | 45.0% | |
| CCAGGAAGGTAAGAGACATT+AGG | + | chr3.4:3465043-3465062 | None:intergenic | 45.0% | |
| CCTAATGTCTCTTACCTTCC+TGG | - | chr3.4:3465040-3465059 | MS.gene009411:CDS | 45.0% | |
| CGGTCTTGAATATGACGAGA+AGG | - | chr3.4:3461097-3461116 | MS.gene009411:intron | 45.0% | |
| CTAGCTTGACATTCCTGAAG+TGG | - | chr3.4:3464760-3464779 | MS.gene009411:CDS | 45.0% | |
| CTGACATCAAATCAGTCCCA+AGG | + | chr3.4:3464298-3464317 | None:intergenic | 45.0% | |
| CTGATCAGCTTCTTACGGAT+AGG | - | chr3.4:3463323-3463342 | MS.gene009411:intron | 45.0% | |
| CTTGCGAACGTGTAACAAAC+GGG | - | chr3.4:3464019-3464038 | MS.gene009411:intron | 45.0% | |
| GAACTCATTTCCTCATCCCA+TGG | - | chr3.4:3460925-3460944 | MS.gene009411:CDS | 45.0% | |
| GATTGAGCTTAGGAGGATTG+AGG | - | chr3.4:3464982-3465001 | MS.gene009411:CDS | 45.0% | |
| GTAGGAAGACGTTGAGTATC+AGG | + | chr3.4:3461062-3461081 | None:intergenic | 45.0% | |
| TACATTTCACCACCTCCAGT+GGG | - | chr3.4:3462711-3462730 | MS.gene009411:intron | 45.0% | |
| TCAGGTTTCGGCTCTTGTTA+GGG | - | chr3.4:3463348-3463367 | MS.gene009411:intron | 45.0% | |
| TGGTGGAAAGAACATGCTCA+TGG | - | chr3.4:3465060-3465079 | MS.gene009411:CDS | 45.0% | |
| ! | ACGTAAGGCTTTTGAACCCA+TGG | + | chr3.4:3460945-3460964 | None:intergenic | 45.0% |
| ! | CGTAAGGCTTTTGAACCCAT+GGG | + | chr3.4:3460944-3460963 | None:intergenic | 45.0% |
| ! | GGCGTGATTTTGGATCTGTT+TGG | + | chr3.4:3463066-3463085 | None:intergenic | 45.0% |
| ! | GTATGGGGTTGATTGAGCTT+AGG | - | chr3.4:3464972-3464991 | MS.gene009411:CDS | 45.0% |
| ! | TGGGTTGTATGGCGTGATTT+TGG | + | chr3.4:3463076-3463095 | None:intergenic | 45.0% |
| !! | CTTCACCAACTGATTCGGAA+AGG | + | chr3.4:3460905-3460924 | None:intergenic | 45.0% |
| !! | CTTGGGACTGATTTGATGTC+AGG | - | chr3.4:3464296-3464315 | MS.gene009411:intron | 45.0% |
| !! | CTTTCCGAATCAGTTGGTGA+AGG | - | chr3.4:3460903-3460922 | MS.gene009411:CDS | 45.0% |
| !! | AAAAAATAATAAATAGTTAA+GGG | - | chr3.4:3461810-3461829 | MS.gene009411:intron | 5.0% |
| !! | TATTATAATATAATATCATA+TGG | - | chr3.4:3462476-3462495 | MS.gene009411:CDS | 5.0% |
| !!! | TTATTTTATAAAATTATAAG+TGG | - | chr3.4:3462548-3462567 | MS.gene009411:CDS | 5.0% |
| !!! | TTTTTATATTTTTTTTTTGA+AGG | + | chr3.4:3462524-3462543 | None:intergenic | 5.0% |
| AGAATGTGTGAGGACGAGTG+CGG | + | chr3.4:3460977-3460996 | None:intergenic | 50.0% | |
| AGGAGACTTGGCCAAAGTAG+CGG | + | chr3.4:3465023-3465042 | None:intergenic | 50.0% | |
| CAAAGTAGCGGCAATTTCCC+TGG | + | chr3.4:3465011-3465030 | None:intergenic | 50.0% | |
| CACTCGACACACCTTAGTGT+TGG | - | chr3.4:3464079-3464098 | MS.gene009411:intron | 50.0% | |
| CAGAACAGAAAGGCCACTTC+AGG | + | chr3.4:3464776-3464795 | None:intergenic | 50.0% | |
| CAGGGAAATTGCCGCTACTT+TGG | - | chr3.4:3465009-3465028 | MS.gene009411:CDS | 50.0% | |
| CATACCTCTTCGAATCCCAC+TGG | + | chr3.4:3462729-3462748 | None:intergenic | 50.0% | |
| CATCACTTTCTCCCTCAGCA+CGG | + | chr3.4:3464916-3464935 | None:intergenic | 50.0% | |
| CTAACAAGAGCCGAAACCTG+AGG | + | chr3.4:3463349-3463368 | None:intergenic | 50.0% | |
| CTACTGCTGTTGCTGGTATG+GGG | - | chr3.4:3464957-3464976 | MS.gene009411:CDS | 50.0% | |
| CTCAGGTTTCGGCTCTTGTT+AGG | - | chr3.4:3463347-3463366 | MS.gene009411:intron | 50.0% | |
| CTGCTCAACAGCCCTGATAT+TGG | + | chr3.4:3464813-3464832 | None:intergenic | 50.0% | |
| GCATGTTCTTTCCACCAGGA+AGG | + | chr3.4:3465057-3465076 | None:intergenic | 50.0% | |
| GCGAAATCTGTCGAAGAGGA+CGG | + | chr3.4:3460877-3460896 | None:intergenic | 50.0% | |
| GCTACTGCTGTTGCTGGTAT+GGG | - | chr3.4:3464956-3464975 | MS.gene009411:CDS | 50.0% | |
| GGCATCCTTTCCGAATCAGT+TGG | - | chr3.4:3460897-3460916 | MS.gene009411:CDS | 50.0% | |
| GGTGTAGAGAGAGGAGTTGA+CGG | + | chr3.4:3460835-3460854 | None:intergenic | 50.0% | |
| GTACATTTCACCACCTCCAG+TGG | - | chr3.4:3462710-3462729 | MS.gene009411:intron | 50.0% | |
| GTCCTCTTCGACAGATTTCG+CGG | - | chr3.4:3460876-3460895 | MS.gene009411:CDS | 50.0% | |
| GTGCGGATATCGAAGACGTA+AGG | + | chr3.4:3460960-3460979 | None:intergenic | 50.0% | |
| TACGGATAGGCCTCAGGTTT+CGG | - | chr3.4:3463336-3463355 | MS.gene009411:intron | 50.0% | |
| TAGGAGGATTGAGGCTTCCA+GGG | - | chr3.4:3464991-3465010 | MS.gene009411:CDS | 50.0% | |
| TCTGATGCTACTGCTGTTGC+TGG | - | chr3.4:3464950-3464969 | MS.gene009411:CDS | 50.0% | |
| TGCTACTGCTGTTGCTGGTA+TGG | - | chr3.4:3464955-3464974 | MS.gene009411:CDS | 50.0% | |
| TGTTGTGATGAAGGCGGAAC+AGG | - | chr3.4:3464871-3464890 | MS.gene009411:CDS | 50.0% | |
| TTAGGAGGATTGAGGCTTCC+AGG | - | chr3.4:3464990-3465009 | MS.gene009411:CDS | 50.0% | |
| ! | GCTTTTGAACCCATGGGATG+AGG | + | chr3.4:3460938-3460957 | None:intergenic | 50.0% |
| ! | TGGGGTTGATTGAGCTTAGG+AGG | - | chr3.4:3464975-3464994 | MS.gene009411:CDS | 50.0% |
| !! | AGCCCCTGATGTTAGCTTGT+TGG | + | chr3.4:3463096-3463115 | None:intergenic | 50.0% |
| !! | GCCCCTGATGTTAGCTTGTT+GGG | + | chr3.4:3463095-3463114 | None:intergenic | 50.0% |
| !! | TAGTCTTGTGAGAAGGGCCA+AGG | - | chr3.4:3463372-3463391 | MS.gene009411:intron | 50.0% |
| ACCTCCAGTGGGATTCGAAG+AGG | - | chr3.4:3462722-3462741 | MS.gene009411:intron | 55.0% | |
| ACCTCTTCGAATCCCACTGG+AGG | + | chr3.4:3462726-3462745 | None:intergenic | 55.0% | |
| GCTTCTTACGGATAGGCCTC+AGG | - | chr3.4:3463330-3463349 | MS.gene009411:intron | 55.0% | |
| GTAGAGAGAGGAGTTGACGG+CGG | + | chr3.4:3460832-3460851 | None:intergenic | 55.0% | |
| TCCTCTCTCTACACCGTCGA+CGG | - | chr3.4:3460840-3460859 | MS.gene009411:CDS | 55.0% | |
| TCTTCGAATCCCACTGGAGG+TGG | + | chr3.4:3462723-3462742 | None:intergenic | 55.0% | |
| TGCCGCGAAATCTGTCGAAG+AGG | + | chr3.4:3460881-3460900 | None:intergenic | 55.0% | |
| AACCTCGCACGCGTCGCATT+CGG | - | chr3.4:3460789-3460808 | MS.gene009411:CDS | 60.0% | |
| ACCGTCGACGGTGTAGAGAG+AGG | + | chr3.4:3460844-3460863 | None:intergenic | 60.0% | |
| AGAGGAGTTGACGGCGGTTG+CGG | + | chr3.4:3460826-3460845 | None:intergenic | 60.0% | |
| CAGGGCTGTTGAGCAGAAGC+AGG | - | chr3.4:3464817-3464836 | MS.gene009411:CDS | 60.0% | |
| GAAGCAGGTGGCACAGCAAG+AGG | - | chr3.4:3464832-3464851 | MS.gene009411:CDS | 60.0% | |
| GAGTCGCGAACACTGACACG+TGG | - | chr3.4:3463523-3463542 | MS.gene009411:intron | 60.0% | |
| GCTGCGATCATCCGTGCTGA+GGG | - | chr3.4:3464902-3464921 | MS.gene009411:CDS | 60.0% | |
| GGCTGTTGAGCAGAAGCAGG+TGG | - | chr3.4:3464820-3464839 | MS.gene009411:CDS | 60.0% | |
| TCTCTCTACACCGTCGACGG+TGG | - | chr3.4:3460843-3460862 | MS.gene009411:CDS | 60.0% | |
| TGCTGCGATCATCCGTGCTG+AGG | - | chr3.4:3464901-3464920 | MS.gene009411:CDS | 60.0% | |
| TGGCACAGCAAGAGGCAGAG+AGG | - | chr3.4:3464840-3464859 | MS.gene009411:CDS | 60.0% | |
| CGACGCGTGCGAGGTTTGAG+AGG | + | chr3.4:3460785-3460804 | None:intergenic | 65.0% | |
| GCACGCGTCGCATTCGGTCT+CGG | - | chr3.4:3460795-3460814 | MS.gene009411:CDS | 65.0% | |
| TGTCGAAGAGGACGGCGCGT+TGG | + | chr3.4:3460869-3460888 | None:intergenic | 65.0% | |
| GACCGAATGCGACGCGTGCG+AGG | + | chr3.4:3460794-3460813 | None:intergenic | 70.0% | |
| GGAGTTGACGGCGGTTGCGG+CGG | + | chr3.4:3460823-3460842 | None:intergenic | 70.0% | |
| ! | GGCGCGTTGGCCACCGTCGA+CGG | + | chr3.4:3460856-3460875 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 3460756 | 3465102 | 3460756 | ID=MS.gene009411 |
| chr3.4 | mRNA | 3460756 | 3465102 | 3460756 | ID=MS.gene009411.t1;Parent=MS.gene009411 |
| chr3.4 | exon | 3464724 | 3465102 | 3464724 | ID=MS.gene009411.t1.exon1;Parent=MS.gene009411.t1 |
| chr3.4 | CDS | 3464724 | 3465102 | 3464724 | ID=cds.MS.gene009411.t1;Parent=MS.gene009411.t1 |
| chr3.4 | exon | 3462400 | 3462574 | 3462400 | ID=MS.gene009411.t1.exon2;Parent=MS.gene009411.t1 |
| chr3.4 | CDS | 3462400 | 3462574 | 3462400 | ID=cds.MS.gene009411.t1;Parent=MS.gene009411.t1 |
| chr3.4 | exon | 3460756 | 3461038 | 3460756 | ID=MS.gene009411.t1.exon3;Parent=MS.gene009411.t1 |
| chr3.4 | CDS | 3460756 | 3461038 | 3460756 | ID=cds.MS.gene009411.t1;Parent=MS.gene009411.t1 |
| Gene Sequence |
| Protein sequence |
