Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56214.t1 | XP_024635709.1 | 99.3 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 4.00E-144 | 520.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56214.t1 | O04331 | 76.4 | 276 | 64 | 1 | 1 | 275 | 1 | 276 | 5.5e-110 | 398.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56214.t1 | B7FJH0 | 99.3 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 2.9e-144 | 520.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050427 | MS.gene56214 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene56214 | 0.808115 | 3.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56214 | MS.gene016292 | PPI |
| MS.gene063067 | MS.gene56214 | PPI |
| MS.gene56214 | MS.gene063809 | PPI |
| MS.gene000128 | MS.gene56214 | PPI |
| MS.gene80094 | MS.gene56214 | PPI |
| MS.gene88440 | MS.gene56214 | PPI |
| MS.gene016292 | MS.gene56214 | PPI |
| MS.gene78840 | MS.gene56214 | PPI |
| MS.gene009411 | MS.gene56214 | PPI |
| MS.gene59883 | MS.gene56214 | PPI |
| MS.gene56214 | MS.gene066925 | PPI |
| MS.gene68716 | MS.gene56214 | PPI |
| MS.gene31416 | MS.gene56214 | PPI |
| MS.gene91416 | MS.gene56214 | PPI |
| MS.gene56214 | MS.gene024895 | PPI |
| MS.gene014181 | MS.gene56214 | PPI |
| MS.gene055768 | MS.gene56214 | PPI |
| MS.gene68113 | MS.gene56214 | PPI |
| MS.gene56214 | MS.gene015412 | PPI |
| MS.gene61084 | MS.gene56214 | PPI |
| MS.gene066925 | MS.gene56214 | PPI |
| MS.gene59884 | MS.gene56214 | PPI |
| MS.gene043467 | MS.gene56214 | PPI |
| MS.gene92318 | MS.gene56214 | PPI |
| MS.gene56214 | MS.gene028857 | PPI |
| MS.gene058374 | MS.gene56214 | PPI |
| MS.gene09764 | MS.gene56214 | PPI |
| MS.gene016544 | MS.gene56214 | PPI |
| MS.gene067266 | MS.gene56214 | PPI |
| MS.gene99648 | MS.gene56214 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56214.t1 | MTR_3g008250 | 99.281 | 278 | 2 | 0 | 1 | 278 | 1 | 278 | 0.0 | 560 |
| MS.gene56214.t1 | MTR_8g046300 | 89.130 | 276 | 29 | 1 | 1 | 275 | 1 | 276 | 0.0 | 504 |
| MS.gene56214.t1 | MTR_2g090760 | 51.429 | 280 | 128 | 4 | 3 | 278 | 11 | 286 | 3.19e-92 | 275 |
| MS.gene56214.t1 | MTR_4g078200 | 50.566 | 265 | 129 | 2 | 10 | 274 | 20 | 282 | 1.56e-88 | 265 |
| MS.gene56214.t1 | MTR_4g078200 | 54.338 | 219 | 98 | 2 | 56 | 274 | 5 | 221 | 7.01e-79 | 238 |
| MS.gene56214.t1 | MTR_5g093030 | 56.983 | 179 | 75 | 2 | 1 | 178 | 1 | 178 | 4.18e-62 | 194 |
| MS.gene56214.t1 | MTR_5g093040 | 61.538 | 117 | 35 | 1 | 1 | 117 | 2 | 108 | 3.78e-43 | 143 |
| MS.gene56214.t1 | MTR_6g004320 | 58.955 | 134 | 17 | 1 | 91 | 224 | 1 | 96 | 1.49e-41 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56214.t1 | AT5G40770 | 82.609 | 276 | 47 | 1 | 1 | 275 | 1 | 276 | 4.64e-171 | 474 |
| MS.gene56214.t1 | AT3G27280 | 80.645 | 279 | 53 | 1 | 1 | 278 | 1 | 279 | 6.78e-169 | 468 |
| MS.gene56214.t1 | AT3G27280 | 80.645 | 279 | 53 | 1 | 1 | 278 | 1 | 279 | 6.78e-169 | 468 |
| MS.gene56214.t1 | AT5G14300 | 66.171 | 269 | 64 | 2 | 11 | 278 | 4 | 246 | 1.41e-118 | 340 |
| MS.gene56214.t1 | AT1G03860 | 52.239 | 268 | 122 | 2 | 1 | 263 | 1 | 267 | 5.76e-92 | 274 |
| MS.gene56214.t1 | AT1G03860 | 52.239 | 268 | 122 | 2 | 1 | 263 | 1 | 267 | 5.76e-92 | 274 |
| MS.gene56214.t1 | AT4G28510 | 51.969 | 254 | 121 | 1 | 10 | 263 | 15 | 267 | 4.07e-89 | 266 |
| MS.gene56214.t1 | AT5G44140 | 52.157 | 255 | 121 | 1 | 10 | 264 | 15 | 268 | 8.48e-87 | 260 |
| MS.gene56214.t1 | AT2G20530 | 50.996 | 251 | 121 | 2 | 13 | 263 | 17 | 265 | 1.67e-85 | 257 |
| MS.gene56214.t1 | AT2G20530 | 50.996 | 251 | 121 | 2 | 13 | 263 | 17 | 265 | 1.67e-85 | 257 |
| MS.gene56214.t1 | AT1G03860 | 54.680 | 203 | 91 | 1 | 61 | 263 | 1 | 202 | 7.49e-74 | 225 |
Find 81 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGTTTCGGCTCTTGTT+AGG | 0.240010 | 3.3:-4043906 | MS.gene56214:CDS |
| CCTAATGTCTCTTACCTTCC+TGG | 0.262402 | 3.3:-4042224 | MS.gene56214:CDS |
| TACGGATAGGCCTCAGGTTT+CGG | 0.283193 | 3.3:-4043917 | MS.gene56214:CDS |
| TCTGATGCTACTGCTGTTGC+TGG | 0.297902 | 3.3:-4042314 | MS.gene56214:CDS |
| TTAGGAGGATTGAGGCTTCC+AGG | 0.308845 | 3.3:-4042274 | MS.gene56214:CDS |
| ATTCACCATCTGAAGATCTT+TGG | 0.335078 | 3.3:+4046328 | None:intergenic |
| GTAGGAAGACGTTGAGTATC+AGG | 0.347514 | 3.3:+4046281 | None:intergenic |
| TGCTACTGCTGTTGCTGGTA+TGG | 0.357125 | 3.3:-4042309 | MS.gene56214:CDS |
| GCTACTGCTGTTGCTGGTAT+GGG | 0.368570 | 3.3:-4042308 | MS.gene56214:CDS |
| GCTATTACTCATTTGTCATA+TGG | 0.377706 | 3.3:-4043832 | MS.gene56214:CDS |
| AACCTCGCACGCGTCGCATT+CGG | 0.385015 | 3.3:-4046551 | MS.gene56214:CDS |
| GCACGCGTCGCATTCGGTCT+CGG | 0.405011 | 3.3:-4046545 | MS.gene56214:CDS |
| CAGGGAAATTGCCGCTACTT+TGG | 0.409034 | 3.3:-4042255 | MS.gene56214:CDS |
| TGTTGTGATGAAGGCGGAAC+AGG | 0.423261 | 3.3:-4042393 | MS.gene56214:CDS |
| GTATGGGGTTGATTGAGCTT+AGG | 0.424876 | 3.3:-4042292 | MS.gene56214:CDS |
| AGTTCCTTCACCAACTGATT+CGG | 0.429613 | 3.3:+4046433 | None:intergenic |
| CCAGGAAGGTAAGAGACATT+AGG | 0.436894 | 3.3:+4042224 | None:intergenic |
| TAATGCTGATCAGCTTCTTA+CGG | 0.440478 | 3.3:-4043935 | MS.gene56214:CDS |
| TGCTGCTTGATTGCTTCCCA+TGG | 0.442091 | 3.3:+4046586 | None:intergenic |
| TCAGGTTTCGGCTCTTGTTA+GGG | 0.442315 | 3.3:-4043905 | MS.gene56214:CDS |
| CCGAGATTCTGAACAATAGT+AGG | 0.443468 | 3.3:+4046263 | None:intergenic |
| CCTACTATTGTTCAGAATCT+CGG | 0.444298 | 3.3:-4046263 | MS.gene56214:CDS |
| AGAGGAGTTGACGGCGGTTG+CGG | 0.445413 | 3.3:+4046517 | None:intergenic |
| GTCTAAGTTTGTTGTGATGA+AGG | 0.448310 | 3.3:-4042402 | MS.gene56214:CDS |
| GTAATGATATTACCGATTGA+AGG | 0.458986 | 3.3:+4046215 | None:intergenic |
| GCTTCTTACGGATAGGCCTC+AGG | 0.461424 | 3.3:-4043923 | MS.gene56214:CDS |
| CACACATTCTCATCAATCTC+TGG | 0.473261 | 3.3:-4046353 | MS.gene56214:CDS |
| TGGGGTTGATTGAGCTTAGG+AGG | 0.474046 | 3.3:-4042289 | MS.gene56214:CDS |
| GGCGCGTTGGCCACCGTCGA+CGG | 0.487014 | 3.3:+4046487 | None:intergenic |
| GAAGCAGGTGGCACAGCAAG+AGG | 0.501217 | 3.3:-4042432 | MS.gene56214:CDS |
| ACAACTCTTAACAGGTAATG+AGG | 0.502279 | 3.3:-4043983 | MS.gene56214:intron |
| TGCCGCGGAATCTGTCGAAT+AGG | 0.511124 | 3.3:+4046462 | None:intergenic |
| GATTGAGCTTAGGAGGATTG+AGG | 0.519488 | 3.3:-4042282 | MS.gene56214:CDS |
| TAGGGATAGTCTTGTGAGAA+GGG | 0.523460 | 3.3:-4043887 | MS.gene56214:CDS |
| GAACTCATTTCCTCATCCCA+TGG | 0.525793 | 3.3:-4046415 | MS.gene56214:CDS |
| GAGAAGGTTCTTCCTTCAAT+CGG | 0.527364 | 3.3:-4046227 | MS.gene56214:intron |
| CAAAGTAGCGGCAATTTCCC+TGG | 0.531408 | 3.3:+4042256 | None:intergenic |
| CATATGGTGGTGAATTCTCT+AGG | 0.533003 | 3.3:-4043816 | MS.gene56214:intron |
| TTAGGGATAGTCTTGTGAGA+AGG | 0.533036 | 3.3:-4043888 | MS.gene56214:CDS |
| AAGTAGAATATTGAAATCCT+TGG | 0.533739 | 3.3:+4043864 | None:intergenic |
| TGCTGCGATCATCCGTGCTG+AGG | 0.540308 | 3.3:-4042363 | MS.gene56214:CDS |
| CAGGGCTGTTGAGCAGAAGC+AGG | 0.541558 | 3.3:-4042447 | MS.gene56214:CDS |
| TAGGAGGATTGAGGCTTCCA+GGG | 0.548350 | 3.3:-4042273 | MS.gene56214:CDS |
| GGAGTTGACGGCGGTTGCGG+CGG | 0.549095 | 3.3:+4046520 | None:intergenic |
| GTAAGAGACATTAGGAGACT+TGG | 0.549961 | 3.3:+4042232 | None:intergenic |
| AACTCATTTCCTCATCCCAT+GGG | 0.550217 | 3.3:-4046414 | MS.gene56214:CDS |
| GCTGCGATCATCCGTGCTGA+GGG | 0.565939 | 3.3:-4042362 | MS.gene56214:CDS |
| ATGAGCATGTTCTTTCCACC+AGG | 0.569837 | 3.3:+4042206 | None:intergenic |
| CTACTGCTGTTGCTGGTATG+GGG | 0.570866 | 3.3:-4042307 | MS.gene56214:CDS |
| GGCATCCTTTCCGAATCAGT+TGG | 0.571180 | 3.3:-4046443 | MS.gene56214:CDS |
| GGTGTAGAGAGAGGAGTTGA+CGG | 0.577010 | 3.3:+4046508 | None:intergenic |
| CGACGCGTGCGAGGTTTGAG+AGG | 0.584250 | 3.3:+4046558 | None:intergenic |
| TCCTCTCTCTACACCGTCGA+CGG | 0.584609 | 3.3:-4046500 | MS.gene56214:CDS |
| GACCGAATGCGACGCGTGCG+AGG | 0.589146 | 3.3:+4046549 | None:intergenic |
| TGGTGGAAAGAACATGCTCA+TGG | 0.590341 | 3.3:-4042204 | MS.gene56214:CDS |
| CTGATCAGCTTCTTACGGAT+AGG | 0.590505 | 3.3:-4043930 | MS.gene56214:CDS |
| TAGTCTTGTGAGAAGGGCCA+AGG | 0.601437 | 3.3:-4043881 | MS.gene56214:CDS |
| GCATGTTCTTTCCACCAGGA+AGG | 0.602806 | 3.3:+4042210 | None:intergenic |
| CGGTCTTGAATATGACGAGA+AGG | 0.603923 | 3.3:-4046243 | MS.gene56214:CDS |
| GTGCGGATATCGAAGACGTA+AGG | 0.605844 | 3.3:+4046383 | None:intergenic |
| ATTACTCATTTGTCATATGG+TGG | 0.611449 | 3.3:-4043829 | MS.gene56214:CDS |
| CTTCACCAACTGATTCGGAA+AGG | 0.611882 | 3.3:+4046438 | None:intergenic |
| CTTTCCGAATCAGTTGGTGA+AGG | 0.612169 | 3.3:-4046437 | MS.gene56214:CDS |
| GGCTGTTGAGCAGAAGCAGG+TGG | 0.617512 | 3.3:-4042444 | MS.gene56214:CDS |
| AGGAGACTTGGCCAAAGTAG+CGG | 0.624726 | 3.3:+4042244 | None:intergenic |
| GCGGAATCTGTCGAATAGGA+CGG | 0.637203 | 3.3:+4046466 | None:intergenic |
| CATCACTTTCTCCCTCAGCA+CGG | 0.638713 | 3.3:+4042351 | None:intergenic |
| TGGTACCAAAGATCTTCAGA+TGG | 0.642264 | 3.3:-4046333 | MS.gene56214:CDS |
| ACCGTCGACGGTGTAGAGAG+AGG | 0.647102 | 3.3:+4046499 | None:intergenic |
| TGTCGAATAGGACGGCGCGT+TGG | 0.647621 | 3.3:+4046474 | None:intergenic |
| TCTCTCTACACCGTCGACGG+TGG | 0.651078 | 3.3:-4046497 | MS.gene56214:CDS |
| CTGATTCGGAAAGGATGCCG+CGG | 0.651487 | 3.3:+4046447 | None:intergenic |
| GTCCTATTCGACAGATTCCG+CGG | 0.654293 | 3.3:-4046464 | MS.gene56214:CDS |
| GATTACCCTCATCAACGTGA+AGG | 0.656755 | 3.3:+4042173 | None:intergenic |
| TGGCACAGCAAGAGGCAGAG+AGG | 0.662475 | 3.3:-4042424 | MS.gene56214:CDS |
| AATGTCTCTTACCTTCCTGG+TGG | 0.667494 | 3.3:-4042221 | MS.gene56214:CDS |
| TAAGTTTGTTGTGATGAAGG+CGG | 0.672014 | 3.3:-4042399 | MS.gene56214:CDS |
| CTAACAAGAGCCGAAACCTG+AGG | 0.700849 | 3.3:+4043907 | None:intergenic |
| GAGATTGATGAGAATGTGTG+AGG | 0.741623 | 3.3:+4046356 | None:intergenic |
| GTAGAGAGAGGAGTTGACGG+CGG | 0.788568 | 3.3:+4046511 | None:intergenic |
| AGAATGTGTGAGGACGAGTG+CGG | 0.814249 | 3.3:+4046366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATATATTTAAACCT+AGG | - | chr3.3:4044698-4044717 | MS.gene56214:intron | 10.0% |
| !! | GAAAAAATAATAAATAGTTA+AGG | - | chr3.3:4044184-4044203 | MS.gene56214:intron | 10.0% |
| !!! | ATAGTAAAAGAATTTTTTAT+TGG | + | chr3.3:4042930-4042949 | None:intergenic | 10.0% |
| !!! | CTATTGATTTTAAAATTTTA+AGG | - | chr3.3:4042946-4042965 | MS.gene56214:intron | 10.0% |
| !!! | TTAAAATTTTAAGGATTTTA+TGG | - | chr3.3:4042955-4042974 | MS.gene56214:intron | 10.0% |
| !! | AATTAAAAATATTGGTAAGT+TGG | + | chr3.3:4046082-4046101 | None:intergenic | 15.0% |
| !! | ATTTAAAAATCATAAAGTGT+CGG | + | chr3.3:4045891-4045910 | None:intergenic | 15.0% |
| !! | CAAAAAAAATCTAAATACTA+TGG | + | chr3.3:4045667-4045686 | None:intergenic | 15.0% |
| !! | GTTCTTGAAATTAAAAATAT+TGG | + | chr3.3:4046090-4046109 | None:intergenic | 15.0% |
| !! | TAAAGAAATTGAATTAGTTA+TGG | - | chr3.3:4045075-4045094 | MS.gene56214:intron | 15.0% |
| !! | TAACAAATAAAAAATGTGTA+TGG | + | chr3.3:4043030-4043049 | None:intergenic | 15.0% |
| !! | TCATTTGATTAAATTAGAAA+AGG | - | chr3.3:4045444-4045463 | MS.gene56214:intron | 15.0% |
| !! | TCTTCTTGATATTAAAAAAA+TGG | + | chr3.3:4045919-4045938 | None:intergenic | 15.0% |
| !! | TTGTAAAAAAAAATCACATT+TGG | - | chr3.3:4045225-4045244 | MS.gene56214:intron | 15.0% |
| !!! | AATTTTTTAATTTGAGACTA+AGG | + | chr3.3:4043709-4043728 | None:intergenic | 15.0% |
| !!! | ATGGATTTTATAAGATTTTA+AGG | - | chr3.3:4042974-4042993 | MS.gene56214:intron | 15.0% |
| !!! | ATGGGATTTTAAAATTTTAA+AGG | - | chr3.3:4042806-4042825 | MS.gene56214:intron | 15.0% |
| !!! | ATTAGCTTTAATTATGATTT+AGG | - | chr3.3:4042598-4042617 | MS.gene56214:intron | 15.0% |
| !!! | ATTTTTTAATTTGAGACTAA+GGG | + | chr3.3:4043708-4043727 | None:intergenic | 15.0% |
| !!! | CAATTGTTTTGTAATTTATA+GGG | - | chr3.3:4044636-4044655 | MS.gene56214:intron | 15.0% |
| !!! | TGGATTTTATAAGATTTTAA+GGG | - | chr3.3:4042975-4042994 | MS.gene56214:intron | 15.0% |
| !!! | TTAGCTTTAATTATGATTTA+GGG | - | chr3.3:4042599-4042618 | MS.gene56214:intron | 15.0% |
| !!! | TTTAATAAATTGGATTTTGA+TGG | + | chr3.3:4043463-4043482 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTAAGGCTAAA+GGG | + | chr3.3:4043903-4043922 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAAAGATTTGTAA+GGG | + | chr3.3:4043103-4043122 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGAAAGATTTGTA+AGG | + | chr3.3:4043104-4043123 | None:intergenic | 15.0% |
| !! | AATTTCAAGAACTAACTTAT+TGG | - | chr3.3:4046098-4046117 | MS.gene56214:intron | 20.0% |
| !! | ATTAAAAAATTGTTGCGTTT+AGG | - | chr3.3:4043718-4043737 | MS.gene56214:intron | 20.0% |
| !! | TAAAGGATTCAATGAATTTA+GGG | - | chr3.3:4042823-4042842 | MS.gene56214:intron | 20.0% |
| !! | TAATTTCAAACACAAAATGA+GGG | + | chr3.3:4043139-4043158 | None:intergenic | 20.0% |
| !! | TTAAAAAATTGTTGCGTTTA+GGG | - | chr3.3:4043719-4043738 | MS.gene56214:intron | 20.0% |
| !! | TTAAAGGATTCAATGAATTT+AGG | - | chr3.3:4042822-4042841 | MS.gene56214:intron | 20.0% |
| !! | TTAATTATGAAAAAGTCTTG+TGG | + | chr3.3:4043643-4043662 | None:intergenic | 20.0% |
| !!! | ATATGTACAATTGAATTTTG+TGG | + | chr3.3:4043065-4043084 | None:intergenic | 20.0% |
| !!! | ATTTGTTTGTTTAAGATTCA+GGG | - | chr3.3:4045098-4045117 | MS.gene56214:intron | 20.0% |
| !!! | GCAATTGTTTTGTAATTTAT+AGG | - | chr3.3:4044635-4044654 | MS.gene56214:intron | 20.0% |
| !!! | GTTTTTTTAATTAAGGCTAA+AGG | + | chr3.3:4043904-4043923 | None:intergenic | 20.0% |
| !!! | TAAATAGTTAAGGGTATAAT+AGG | - | chr3.3:4044194-4044213 | MS.gene56214:intron | 20.0% |
| !!! | TAGCTTTAATTATGATTTAG+GGG | - | chr3.3:4042600-4042619 | MS.gene56214:intron | 20.0% |
| !!! | TATGTACAATTGAATTTTGT+GGG | + | chr3.3:4043064-4043083 | None:intergenic | 20.0% |
| !!! | TTATACACTCAAGATTTTAA+TGG | - | chr3.3:4042745-4042764 | MS.gene56214:intron | 20.0% |
| ! | AAAGGATTCAATGAATTTAG+GGG | - | chr3.3:4042824-4042843 | MS.gene56214:intron | 25.0% |
| ! | AAGTAACATTAATGCTTCAT+TGG | - | chr3.3:4044219-4044238 | MS.gene56214:intron | 25.0% |
| ! | AAGTAGAATATTGAAATCCT+TGG | + | chr3.3:4044907-4044926 | None:intergenic | 25.0% |
| ! | AATTACTCTTTCCAATGAAA+TGG | + | chr3.3:4044129-4044148 | None:intergenic | 25.0% |
| ! | ACAGTGTTTACTAAATTTAG+CGG | + | chr3.3:4043978-4043997 | None:intergenic | 25.0% |
| ! | ATCACTTAAAAAAAGTCTCA+TGG | + | chr3.3:4043517-4043536 | None:intergenic | 25.0% |
| ! | ATGAAAAGATGAGATTTCTT+GGG | + | chr3.3:4043394-4043413 | None:intergenic | 25.0% |
| ! | CAAAATCATTCAAATTTCGA+AGG | + | chr3.3:4043490-4043509 | None:intergenic | 25.0% |
| ! | CATATAAGATTTATCATCCT+AGG | + | chr3.3:4044718-4044737 | None:intergenic | 25.0% |
| ! | CGAAGGATTGTTTAATAAAT+TGG | + | chr3.3:4043473-4043492 | None:intergenic | 25.0% |
| ! | CTAATTTCAAACACAAAATG+AGG | + | chr3.3:4043140-4043159 | None:intergenic | 25.0% |
| ! | GTCAAAAGGACTTATAATTT+GGG | + | chr3.3:4044107-4044126 | None:intergenic | 25.0% |
| ! | TAAATTTGACAACTCTTAAC+AGG | - | chr3.3:4044777-4044796 | MS.gene56214:intron | 25.0% |
| ! | TCAGATAAATTTGTAGTGTT+TGG | - | chr3.3:4044322-4044341 | MS.gene56214:intron | 25.0% |
| ! | TTCTATGATTCAAAACAAAC+AGG | + | chr3.3:4045124-4045143 | None:intergenic | 25.0% |
| ! | TTGAATCATAGAAGTGATTA+TGG | - | chr3.3:4045131-4045150 | MS.gene56214:intron | 25.0% |
| ! | TTGAATGTAACTTAATGTGT+CGG | - | chr3.3:4045550-4045569 | MS.gene56214:intron | 25.0% |
| !! | AAGGATTTCAAAGGATTTTA+TGG | - | chr3.3:4042787-4042806 | MS.gene56214:intron | 25.0% |
| !! | AGCTTTAATTATGATTTAGG+GGG | - | chr3.3:4042601-4042620 | MS.gene56214:intron | 25.0% |
| !! | AGGATTTCAAAGGATTTTAT+GGG | - | chr3.3:4042788-4042807 | MS.gene56214:intron | 25.0% |
| !! | AGTTTAGAATATTGGTAAGT+TGG | + | chr3.3:4046246-4046265 | None:intergenic | 25.0% |
| !! | ATTTTTCCAATTAAGATTGC+AGG | - | chr3.3:4044363-4044382 | MS.gene56214:intron | 25.0% |
| !! | GATTTGTTTGTTTAAGATTC+AGG | - | chr3.3:4045097-4045116 | MS.gene56214:intron | 25.0% |
| !! | TTTAGAGCGACTTATAATTT+GGG | - | chr3.3:4044280-4044299 | MS.gene56214:intron | 25.0% |
| !! | TTTTTCCAATTAAGATTGCA+GGG | - | chr3.3:4044364-4044383 | MS.gene56214:intron | 25.0% |
| !!! | ATTTATCACACTGACTTTTA+AGG | - | chr3.3:4042768-4042787 | MS.gene56214:intron | 25.0% |
| !!! | GTCATTTTAAAAAAGTCTTG+AGG | + | chr3.3:4043559-4043578 | None:intergenic | 25.0% |
| !!! | TGATTTGCTACTTAAATGTA+TGG | + | chr3.3:4045721-4045740 | None:intergenic | 25.0% |
| !!! | TTTCTTTCTCTTTTGTTTCT+TGG | - | chr3.3:4044979-4044998 | MS.gene56214:intron | 25.0% |
| AACAAACACAAATCAGTTCT+AGG | + | chr3.3:4045380-4045399 | None:intergenic | 30.0% | |
| AGCTAACTAATAGCTTATAG+TGG | - | chr3.3:4044038-4044057 | MS.gene56214:intron | 30.0% | |
| ATTACTCATTTGTCATATGG+TGG | - | chr3.3:4044939-4044958 | MS.gene56214:intron | 30.0% | |
| CATGAAAAGATGAGATTTCT+TGG | + | chr3.3:4043395-4043414 | None:intergenic | 30.0% | |
| CATTTAAGTAGCAAATCAAG+AGG | - | chr3.3:4045723-4045742 | MS.gene56214:intron | 30.0% | |
| CTCTTAATTTACTCGTTAAC+TGG | - | chr3.3:4046218-4046237 | MS.gene56214:intron | 30.0% | |
| GAAGACAAGAACTAACTTAA+TGG | - | chr3.3:4045934-4045953 | MS.gene56214:intron | 30.0% | |
| GCAACTTAAAAAAAGTCTTG+TGG | + | chr3.3:4043601-4043620 | None:intergenic | 30.0% | |
| GCTATTACTCATTTGTCATA+TGG | - | chr3.3:4044936-4044955 | MS.gene56214:intron | 30.0% | |
| GCTTCAAATACAATACAATC+TGG | - | chr3.3:4045311-4045330 | MS.gene56214:intron | 30.0% | |
| GCTTTAATTATGATTTAGGG+GGG | - | chr3.3:4042602-4042621 | MS.gene56214:intron | 30.0% | |
| GGTCAAAAGGACTTATAATT+TGG | + | chr3.3:4044108-4044127 | None:intergenic | 30.0% | |
| GGTGATATATAGACTATATG+AGG | - | chr3.3:4045606-4045625 | MS.gene56214:intron | 30.0% | |
| GTAATTTATAGGGACTGAAT+AGG | - | chr3.3:4044646-4044665 | MS.gene56214:intron | 30.0% | |
| TAAAGAAAAAAATTGCCCCA+AGG | + | chr3.3:4044264-4044283 | None:intergenic | 30.0% | |
| TAAGCTTATAGCTTATAAGC+TGG | + | chr3.3:4044545-4044564 | None:intergenic | 30.0% | |
| TATAGTGAGTTAGCATAGTT+AGG | + | chr3.3:4045997-4046016 | None:intergenic | 30.0% | |
| TATGGCACTATACAATTTCA+AGG | + | chr3.3:4045649-4045668 | None:intergenic | 30.0% | |
| TCTATATATCACCAACACTA+AGG | + | chr3.3:4045599-4045618 | None:intergenic | 30.0% | |
| TGTAAAGTGACTTATACCTT+GGG | - | chr3.3:4044245-4044264 | MS.gene56214:intron | 30.0% | |
| TTGATTCATGAGTAATCCTT+GGG | - | chr3.3:4045785-4045804 | MS.gene56214:intron | 30.0% | |
| TTGTAAAGTGACTTATACCT+TGG | - | chr3.3:4044244-4044263 | MS.gene56214:intron | 30.0% | |
| TTTCCAATGAAATGGTCAAA+AGG | + | chr3.3:4044121-4044140 | None:intergenic | 30.0% | |
| TTTGATTCATGAGTAATCCT+TGG | - | chr3.3:4045784-4045803 | MS.gene56214:intron | 30.0% | |
| ! | CAAGTAACTTGTCATTAATG+TGG | - | chr3.3:4044751-4044770 | MS.gene56214:intron | 30.0% |
| ! | GACTTATAATTTGGGACTAA+GGG | - | chr3.3:4044288-4044307 | MS.gene56214:intron | 30.0% |
| ! | GTAATGATATTACCGATTGA+AGG | + | chr3.3:4042556-4042575 | None:intergenic | 30.0% |
| ! | GTATTGGATTAGGATTCTAT+GGG | + | chr3.3:4043681-4043700 | None:intergenic | 30.0% |
| ! | GTCAAGCTAGTTTAGAATAT+TGG | + | chr3.3:4046254-4046273 | None:intergenic | 30.0% |
| ! | TGTATTGGATTAGGATTCTA+TGG | + | chr3.3:4043682-4043701 | None:intergenic | 30.0% |
| ! | TTTTCCAATTAAGATTGCAG+GGG | - | chr3.3:4044365-4044384 | MS.gene56214:intron | 30.0% |
| !! | AATATTGGTAAGTTGGTTCT+AGG | + | chr3.3:4046075-4046094 | None:intergenic | 30.0% |
| !! | CTGACTTTTAAGGATTTCAA+AGG | - | chr3.3:4042778-4042797 | MS.gene56214:intron | 30.0% |
| !! | CTTTAGAGCGACTTATAATT+TGG | - | chr3.3:4044279-4044298 | MS.gene56214:intron | 30.0% |
| !!! | TGGATTTTGATGGATTTTGT+GGG | + | chr3.3:4043453-4043472 | None:intergenic | 30.0% |
| !!! | TTGGATTTTGATGGATTTTG+TGG | + | chr3.3:4043454-4043473 | None:intergenic | 30.0% |
| ACAACTCTTAACAGGTAATG+AGG | - | chr3.3:4044785-4044804 | MS.gene56214:intron | 35.0% | |
| ACAATTTCAAGGACCGAAAT+TGG | + | chr3.3:4045638-4045657 | None:intergenic | 35.0% | |
| ATTCACCATCTGAAGATCTT+TGG | + | chr3.3:4042443-4042462 | None:intergenic | 35.0% | |
| CAAAATAAGCTGCAACAAAC+AGG | + | chr3.3:4045208-4045227 | None:intergenic | 35.0% | |
| CCTACTATTGTTCAGAATCT+CGG | - | chr3.3:4042505-4042524 | MS.gene56214:intron | 35.0% | |
| CTTATCCACTCTTAGCAATA+AGG | - | chr3.3:4044014-4044033 | MS.gene56214:intron | 35.0% | |
| GTAAAGTGACTTATACCTTG+GGG | - | chr3.3:4044246-4044265 | MS.gene56214:intron | 35.0% | |
| TAAGGGAGATGTATTGGATT+AGG | + | chr3.3:4043691-4043710 | None:intergenic | 35.0% | |
| TAATGCTGATCAGCTTCTTA+CGG | - | chr3.3:4044833-4044852 | MS.gene56214:intron | 35.0% | |
| TACAGAGAATCAGAACAGAA+AGG | + | chr3.3:4046290-4046309 | None:intergenic | 35.0% | |
| TATGAGGCAATCTCCAATTT+CGG | - | chr3.3:4045622-4045641 | MS.gene56214:intron | 35.0% | |
| TGACTATAAAAGACCCTGTT+TGG | + | chr3.3:4044520-4044539 | None:intergenic | 35.0% | |
| TTTACCCCTGCAATCTTAAT+TGG | + | chr3.3:4044372-4044391 | None:intergenic | 35.0% | |
| ! | ACTGCTAAACTAGCTTATTG+CGG | - | chr3.3:4044064-4044083 | MS.gene56214:intron | 35.0% |
| ! | AGTCCTTTTGACCATTTCAT+TGG | - | chr3.3:4044115-4044134 | MS.gene56214:intron | 35.0% |
| ! | CGACTTATAATTTGGGACTA+AGG | - | chr3.3:4044287-4044306 | MS.gene56214:intron | 35.0% |
| ! | GCTTATTTCTTACTAGCGTA+TGG | - | chr3.3:4043838-4043857 | MS.gene56214:CDS | 35.0% |
| !! | CGTTTGAGTTTTTCTAAGAG+AGG | - | chr3.3:4043166-4043185 | MS.gene56214:intron | 35.0% |
| !! | GTCTAAGTTTGTTGTGATGA+AGG | - | chr3.3:4046366-4046385 | MS.gene56214:CDS | 35.0% |
| !! | TAAGTTTGTTGTGATGAAGG+CGG | - | chr3.3:4046369-4046388 | MS.gene56214:CDS | 35.0% |
| !!! | TATTGGTGCCTGTTGTTTTA+GGG | - | chr3.3:4046115-4046134 | MS.gene56214:intron | 35.0% |
| !!! | TTAATGGTGCCTGTTGTTTT+AGG | - | chr3.3:4045950-4045969 | MS.gene56214:intron | 35.0% |
| !!! | TTATTGGTGCCTGTTGTTTT+AGG | - | chr3.3:4046114-4046133 | MS.gene56214:intron | 35.0% |
| AACCCAACAAGCTAACATCA+GGG | - | chr3.3:4044605-4044624 | MS.gene56214:intron | 40.0% | |
| AACTCATTTCCTCATCCCAT+GGG | - | chr3.3:4042354-4042373 | MS.gene56214:CDS | 40.0% | |
| AACTTGGTCCCTAAAACAAC+AGG | + | chr3.3:4046126-4046145 | None:intergenic | 40.0% | |
| ACAGTTACCAAACACCAAAC+AGG | - | chr3.3:4044503-4044522 | MS.gene56214:intron | 40.0% | |
| ACTTGCGAACGTGTAACAAA+CGG | - | chr3.3:4045524-4045543 | MS.gene56214:intron | 40.0% | |
| ACTTGGTCACCTAAAACAAC+AGG | + | chr3.3:4045962-4045981 | None:intergenic | 40.0% | |
| AGCTACCTTATTGCTAAGAG+TGG | + | chr3.3:4044022-4044041 | None:intergenic | 40.0% | |
| AGTTCCTTCACCAACTGATT+CGG | + | chr3.3:4042338-4042357 | None:intergenic | 40.0% | |
| CACACATTCTCATCAATCTC+TGG | - | chr3.3:4042415-4042434 | MS.gene56214:CDS | 40.0% | |
| CAGTTACCAAACACCAAACA+GGG | - | chr3.3:4044504-4044523 | MS.gene56214:intron | 40.0% | |
| CCGAGATTCTGAACAATAGT+AGG | + | chr3.3:4042508-4042527 | None:intergenic | 40.0% | |
| CTCTGTACGATCCAATATCA+GGG | - | chr3.3:4046303-4046322 | MS.gene56214:CDS | 40.0% | |
| GAGAAGGTTCTTCCTTCAAT+CGG | - | chr3.3:4042541-4042560 | MS.gene56214:intron | 40.0% | |
| GAGATTGATGAGAATGTGTG+AGG | + | chr3.3:4042415-4042434 | None:intergenic | 40.0% | |
| GTAAGAGACATTAGGAGACT+TGG | + | chr3.3:4046539-4046558 | None:intergenic | 40.0% | |
| TCTCTGTACGATCCAATATC+AGG | - | chr3.3:4046302-4046321 | MS.gene56214:CDS | 40.0% | |
| TGAGACTAAGGGAGATGTAT+TGG | + | chr3.3:4043697-4043716 | None:intergenic | 40.0% | |
| TGGTACCAAAGATCTTCAGA+TGG | - | chr3.3:4042435-4042454 | MS.gene56214:CDS | 40.0% | |
| TTACGAGCGAATGCTAAACT+TGG | + | chr3.3:4046142-4046161 | None:intergenic | 40.0% | |
| TTAGGAGTGAAAGCTCAACT+TGG | + | chr3.3:4045979-4045998 | None:intergenic | 40.0% | |
| ! | CATATGGTGGTGAATTCTCT+AGG | - | chr3.3:4044952-4044971 | MS.gene56214:intron | 40.0% |
| ! | TATGATTTAGGGGGGTGTAT+TGG | - | chr3.3:4042610-4042629 | MS.gene56214:intron | 40.0% |
| !! | AAAAGACCCTGTTTGGTGTT+TGG | + | chr3.3:4044513-4044532 | None:intergenic | 40.0% |
| !! | TAGGGATAGTCTTGTGAGAA+GGG | - | chr3.3:4044881-4044900 | MS.gene56214:intron | 40.0% |
| !! | TGTTAGCTTGTTGGGTTGTA+TGG | + | chr3.3:4044602-4044621 | None:intergenic | 40.0% |
| !! | TTAGGGATAGTCTTGTGAGA+AGG | - | chr3.3:4044880-4044899 | MS.gene56214:intron | 40.0% |
| AATGTCTCTTACCTTCCTGG+TGG | - | chr3.3:4046547-4046566 | MS.gene56214:CDS | 45.0% | |
| ACCCAACAAGCTAACATCAG+GGG | - | chr3.3:4044606-4044625 | MS.gene56214:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+TGG | - | chr3.3:4043277-4043296 | MS.gene56214:intron | 45.0% | |
| AGATAGAGACGAAGAGCGAA+AGG | - | chr3.3:4043302-4043321 | MS.gene56214:intron | 45.0% | |
| ATGAGCATGTTCTTTCCACC+AGG | + | chr3.3:4046565-4046584 | None:intergenic | 45.0% | |
| CAACCCAACAAGCTAACATC+AGG | - | chr3.3:4044604-4044623 | MS.gene56214:intron | 45.0% | |
| CCAGGAAGGTAAGAGACATT+AGG | + | chr3.3:4046547-4046566 | None:intergenic | 45.0% | |
| CCTAATGTCTCTTACCTTCC+TGG | - | chr3.3:4046544-4046563 | MS.gene56214:CDS | 45.0% | |
| CGGTCTTGAATATGACGAGA+AGG | - | chr3.3:4042525-4042544 | MS.gene56214:intron | 45.0% | |
| CTAGCTTGACATTCCTGAAG+TGG | - | chr3.3:4046264-4046283 | MS.gene56214:CDS | 45.0% | |
| CTGACATCAAATCAGTCCCA+AGG | + | chr3.3:4045804-4045823 | None:intergenic | 45.0% | |
| CTGATCAGCTTCTTACGGAT+AGG | - | chr3.3:4044838-4044857 | MS.gene56214:intron | 45.0% | |
| CTTGCGAACGTGTAACAAAC+GGG | - | chr3.3:4045525-4045544 | MS.gene56214:intron | 45.0% | |
| GAACTCATTTCCTCATCCCA+TGG | - | chr3.3:4042353-4042372 | MS.gene56214:CDS | 45.0% | |
| GATTGAGCTTAGGAGGATTG+AGG | - | chr3.3:4046486-4046505 | MS.gene56214:CDS | 45.0% | |
| GTAGGAAGACGTTGAGTATC+AGG | + | chr3.3:4042490-4042509 | None:intergenic | 45.0% | |
| TCAGGTTTCGGCTCTTGTTA+GGG | - | chr3.3:4044863-4044882 | MS.gene56214:intron | 45.0% | |
| TGGTGGAAAGAACATGCTCA+TGG | - | chr3.3:4046564-4046583 | MS.gene56214:CDS | 45.0% | |
| ! | ACGTAAGGCTTTTGAACCCA+TGG | + | chr3.3:4042373-4042392 | None:intergenic | 45.0% |
| ! | CGTAAGGCTTTTGAACCCAT+GGG | + | chr3.3:4042372-4042391 | None:intergenic | 45.0% |
| ! | GGCGTGATTTTGGATCTGTT+TGG | + | chr3.3:4044581-4044600 | None:intergenic | 45.0% |
| ! | GTATGGGGTTGATTGAGCTT+AGG | - | chr3.3:4046476-4046495 | MS.gene56214:CDS | 45.0% |
| ! | TGGGTTGTATGGCGTGATTT+TGG | + | chr3.3:4044591-4044610 | None:intergenic | 45.0% |
| ! | TGTTGCGTTTAGGGTCTGTT+TGG | - | chr3.3:4043728-4043747 | MS.gene56214:intron | 45.0% |
| ! | TTAGGGGGGTGTATTGGATT+AGG | - | chr3.3:4042616-4042635 | MS.gene56214:intron | 45.0% |
| !! | CTTCACCAACTGATTCGGAA+AGG | + | chr3.3:4042333-4042352 | None:intergenic | 45.0% |
| !! | CTTGGGACTGATTTGATGTC+AGG | - | chr3.3:4045802-4045821 | MS.gene56214:intron | 45.0% |
| !! | CTTTCCGAATCAGTTGGTGA+AGG | - | chr3.3:4042331-4042350 | MS.gene56214:CDS | 45.0% |
| !! | TTAATGTGTCGGTGTCGTGT+TGG | - | chr3.3:4045561-4045580 | MS.gene56214:intron | 45.0% |
| !! | AAAAAATAATAAATAGTTAA+GGG | - | chr3.3:4044185-4044204 | MS.gene56214:intron | 5.0% |
| !!! | AATTATTGTTTTTTTAATTA+AGG | + | chr3.3:4043911-4043930 | None:intergenic | 5.0% |
| ACGAAGAGCGAAAGGAGAGA+GGG | - | chr3.3:4043310-4043329 | MS.gene56214:intron | 50.0% | |
| AGAATGTGTGAGGACGAGTG+CGG | + | chr3.3:4042405-4042424 | None:intergenic | 50.0% | |
| AGGAGACTTGGCCAAAGTAG+CGG | + | chr3.3:4046527-4046546 | None:intergenic | 50.0% | |
| CAAAGTAGCGGCAATTTCCC+TGG | + | chr3.3:4046515-4046534 | None:intergenic | 50.0% | |
| CACTCGACACACCTTAGTGT+TGG | - | chr3.3:4045585-4045604 | MS.gene56214:intron | 50.0% | |
| CAGAACAGAAAGGCCACTTC+AGG | + | chr3.3:4046280-4046299 | None:intergenic | 50.0% | |
| CAGGGAAATTGCCGCTACTT+TGG | - | chr3.3:4046513-4046532 | MS.gene56214:CDS | 50.0% | |
| CATCACTTTCTCCCTCAGCA+CGG | + | chr3.3:4046420-4046439 | None:intergenic | 50.0% | |
| CTAACAAGAGCCGAAACCTG+AGG | + | chr3.3:4044864-4044883 | None:intergenic | 50.0% | |
| CTAAGAGAGGTGAGAGAGAG+AGG | - | chr3.3:4043179-4043198 | MS.gene56214:intron | 50.0% | |
| CTACTGCTGTTGCTGGTATG+GGG | - | chr3.3:4046461-4046480 | MS.gene56214:CDS | 50.0% | |
| CTCAGGTTTCGGCTCTTGTT+AGG | - | chr3.3:4044862-4044881 | MS.gene56214:intron | 50.0% | |
| CTGCTCAACAGCCCTGATAT+TGG | + | chr3.3:4046317-4046336 | None:intergenic | 50.0% | |
| GCATGTTCTTTCCACCAGGA+AGG | + | chr3.3:4046561-4046580 | None:intergenic | 50.0% | |
| GCGGAATCTGTCGAATAGGA+CGG | + | chr3.3:4042305-4042324 | None:intergenic | 50.0% | |
| GCTACTGCTGTTGCTGGTAT+GGG | - | chr3.3:4046460-4046479 | MS.gene56214:CDS | 50.0% | |
| GGCATCCTTTCCGAATCAGT+TGG | - | chr3.3:4042325-4042344 | MS.gene56214:CDS | 50.0% | |
| GGTGTAGAGAGAGGAGTTGA+CGG | + | chr3.3:4042263-4042282 | None:intergenic | 50.0% | |
| GTCCTATTCGACAGATTCCG+CGG | - | chr3.3:4042304-4042323 | MS.gene56214:CDS | 50.0% | |
| GTGCGGATATCGAAGACGTA+AGG | + | chr3.3:4042388-4042407 | None:intergenic | 50.0% | |
| TACGGATAGGCCTCAGGTTT+CGG | - | chr3.3:4044851-4044870 | MS.gene56214:intron | 50.0% | |
| TAGGAGGATTGAGGCTTCCA+GGG | - | chr3.3:4046495-4046514 | MS.gene56214:CDS | 50.0% | |
| TCTGATGCTACTGCTGTTGC+TGG | - | chr3.3:4046454-4046473 | MS.gene56214:CDS | 50.0% | |
| TGCTACTGCTGTTGCTGGTA+TGG | - | chr3.3:4046459-4046478 | MS.gene56214:CDS | 50.0% | |
| TGTTGTGATGAAGGCGGAAC+AGG | - | chr3.3:4046375-4046394 | MS.gene56214:CDS | 50.0% | |
| TTAGGAGGATTGAGGCTTCC+AGG | - | chr3.3:4046494-4046513 | MS.gene56214:CDS | 50.0% | |
| ! | GCTTTTGAACCCATGGGATG+AGG | + | chr3.3:4042366-4042385 | None:intergenic | 50.0% |
| ! | TGGGGTTGATTGAGCTTAGG+AGG | - | chr3.3:4046479-4046498 | MS.gene56214:CDS | 50.0% |
| !! | AGCCCCTGATGTTAGCTTGT+TGG | + | chr3.3:4044611-4044630 | None:intergenic | 50.0% |
| !! | GCCCCTGATGTTAGCTTGTT+GGG | + | chr3.3:4044610-4044629 | None:intergenic | 50.0% |
| !! | TAGTCTTGTGAGAAGGGCCA+AGG | - | chr3.3:4044887-4044906 | MS.gene56214:intron | 50.0% |
| AAGAGCGAAAGGAGAGAGGG+GGG | - | chr3.3:4043313-4043332 | MS.gene56214:intron | 55.0% | |
| AGAGAGAGGAGAGAGGAGAG+AGG | - | chr3.3:4043193-4043212 | MS.gene56214:intron | 55.0% | |
| AGAGGAGAGAGGAGAGAGGA+GGG | - | chr3.3:4043197-4043216 | MS.gene56214:intron | 55.0% | |
| AGGTGAGAGAGAGAGGAGAG+AGG | - | chr3.3:4043186-4043205 | MS.gene56214:intron | 55.0% | |
| CGAAGAGCGAAAGGAGAGAG+GGG | - | chr3.3:4043311-4043330 | MS.gene56214:intron | 55.0% | |
| GAAGAGCGAAAGGAGAGAGG+GGG | - | chr3.3:4043312-4043331 | MS.gene56214:intron | 55.0% | |
| GACGAAGAGCGAAAGGAGAG+AGG | - | chr3.3:4043309-4043328 | MS.gene56214:intron | 55.0% | |
| GCTTCTTACGGATAGGCCTC+AGG | - | chr3.3:4044845-4044864 | MS.gene56214:intron | 55.0% | |
| GTAGAGAGAGGAGTTGACGG+CGG | + | chr3.3:4042260-4042279 | None:intergenic | 55.0% | |
| TCCTCTCTCTACACCGTCGA+CGG | - | chr3.3:4042268-4042287 | MS.gene56214:CDS | 55.0% | |
| TGCCGCGGAATCTGTCGAAT+AGG | + | chr3.3:4042309-4042328 | None:intergenic | 55.0% | |
| !! | CTGATTCGGAAAGGATGCCG+CGG | + | chr3.3:4042324-4042343 | None:intergenic | 55.0% |
| AACCTCGCACGCGTCGCATT+CGG | - | chr3.3:4042217-4042236 | MS.gene56214:CDS | 60.0% | |
| ACCGTCGACGGTGTAGAGAG+AGG | + | chr3.3:4042272-4042291 | None:intergenic | 60.0% | |
| AGAGGAGTTGACGGCGGTTG+CGG | + | chr3.3:4042254-4042273 | None:intergenic | 60.0% | |
| CAGGGCTGTTGAGCAGAAGC+AGG | - | chr3.3:4046321-4046340 | MS.gene56214:CDS | 60.0% | |
| GAAGCAGGTGGCACAGCAAG+AGG | - | chr3.3:4046336-4046355 | MS.gene56214:CDS | 60.0% | |
| GAGAGAGGAGAGAGGAGGGA+GGG | - | chr3.3:4043208-4043227 | MS.gene56214:intron | 60.0% | |
| GAGAGGAGAGAGGAGAGAGG+AGG | - | chr3.3:4043196-4043215 | MS.gene56214:intron | 60.0% | |
| GAGTCGCGAACACTGACACG+TGG | - | chr3.3:4045038-4045057 | MS.gene56214:intron | 60.0% | |
| GCTGCGATCATCCGTGCTGA+GGG | - | chr3.3:4046406-4046425 | MS.gene56214:CDS | 60.0% | |
| GGAGAGAGGAGAGAGGAGAG+AGG | - | chr3.3:4043200-4043219 | MS.gene56214:intron | 60.0% | |
| GGCTGTTGAGCAGAAGCAGG+TGG | - | chr3.3:4046324-4046343 | MS.gene56214:CDS | 60.0% | |
| TCTCTCTACACCGTCGACGG+TGG | - | chr3.3:4042271-4042290 | MS.gene56214:CDS | 60.0% | |
| TGCTGCGATCATCCGTGCTG+AGG | - | chr3.3:4046405-4046424 | MS.gene56214:CDS | 60.0% | |
| TGGCACAGCAAGAGGCAGAG+AGG | - | chr3.3:4046344-4046363 | MS.gene56214:CDS | 60.0% | |
| TGTCGAATAGGACGGCGCGT+TGG | + | chr3.3:4042297-4042316 | None:intergenic | 60.0% | |
| AGAGAGGAGGGAGGGAGGGA+GGG | - | chr3.3:4043216-4043235 | MS.gene56214:intron | 65.0% | |
| AGAGGAGAGAGGAGGGAGGG+AGG | - | chr3.3:4043211-4043230 | MS.gene56214:intron | 65.0% | |
| AGCGAAAGGAGAGAGGGGGG+AGG | - | chr3.3:4043316-4043335 | MS.gene56214:intron | 65.0% | |
| CGAAAGGAGAGAGGGGGGAG+GGG | - | chr3.3:4043318-4043337 | MS.gene56214:intron | 65.0% | |
| CGACGCGTGCGAGGTTTGAG+AGG | + | chr3.3:4042213-4042232 | None:intergenic | 65.0% | |
| GAGGAGAGAGGAGGGAGGGA+GGG | - | chr3.3:4043212-4043231 | MS.gene56214:intron | 65.0% | |
| GCACGCGTCGCATTCGGTCT+CGG | - | chr3.3:4042223-4042242 | MS.gene56214:CDS | 65.0% | |
| GCGAAAGGAGAGAGGGGGGA+GGG | - | chr3.3:4043317-4043336 | MS.gene56214:intron | 65.0% | |
| GGAGAGAGGAGAGAGGAGGG+AGG | - | chr3.3:4043207-4043226 | MS.gene56214:intron | 65.0% | |
| GGGGGAGGGGAGAGAGAGAA+GGG | - | chr3.3:4043331-4043350 | MS.gene56214:intron | 65.0% | |
| AGGAGGGAGGGAGGGAGGGA+GGG | - | chr3.3:4043220-4043239 | MS.gene56214:intron | 70.0% | |
| GACCGAATGCGACGCGTGCG+AGG | + | chr3.3:4042222-4042241 | None:intergenic | 70.0% | |
| GAGAGAGGAGGGAGGGAGGG+AGG | - | chr3.3:4043215-4043234 | MS.gene56214:intron | 70.0% | |
| GGAGTTGACGGCGGTTGCGG+CGG | + | chr3.3:4042251-4042270 | None:intergenic | 70.0% | |
| GGGGGGAGGGGAGAGAGAGA+AGG | - | chr3.3:4043330-4043349 | MS.gene56214:intron | 70.0% | |
| AGGGAGGGAGGGAGGGAGGG+AGG | - | chr3.3:4043223-4043242 | MS.gene56214:intron | 75.0% | |
| GAGGAGGGAGGGAGGGAGGG+AGG | - | chr3.3:4043219-4043238 | MS.gene56214:intron | 75.0% | |
| GGGAGGGAGGGAGGGAGGGA+GGG | - | chr3.3:4043224-4043243 | MS.gene56214:intron | 75.0% | |
| ! | GGCGCGTTGGCCACCGTCGA+CGG | + | chr3.3:4042284-4042303 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 4042184 | 4046606 | 4042184 | ID=MS.gene56214 |
| chr3.3 | mRNA | 4042184 | 4046606 | 4042184 | ID=MS.gene56214.t1;Parent=MS.gene56214 |
| chr3.3 | exon | 4046228 | 4046606 | 4046228 | ID=MS.gene56214.t1.exon1;Parent=MS.gene56214.t1 |
| chr3.3 | CDS | 4046228 | 4046606 | 4046228 | ID=cds.MS.gene56214.t1;Parent=MS.gene56214.t1 |
| chr3.3 | exon | 4043817 | 4043991 | 4043817 | ID=MS.gene56214.t1.exon2;Parent=MS.gene56214.t1 |
| chr3.3 | CDS | 4043817 | 4043991 | 4043817 | ID=cds.MS.gene56214.t1;Parent=MS.gene56214.t1 |
| chr3.3 | exon | 4042184 | 4042466 | 4042184 | ID=MS.gene56214.t1.exon3;Parent=MS.gene56214.t1 |
| chr3.3 | CDS | 4042184 | 4042466 | 4042184 | ID=cds.MS.gene56214.t1;Parent=MS.gene56214.t1 |
| Gene Sequence |
| Protein sequence |
