Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010390.t1 | XP_003611788.1 | 97.9 | 326 | 7 | 0 | 1 | 326 | 1 | 326 | 3.90E-183 | 650.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010390.t1 | Q9FX85 | 64.2 | 299 | 104 | 2 | 27 | 322 | 48 | 346 | 8.1e-105 | 381.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010390.t1 | G7K821 | 97.9 | 326 | 7 | 0 | 1 | 326 | 1 | 326 | 2.8e-183 | 650.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025145 | MS.gene010390 | PPI |
| MS.gene010390 | MS.gene034512 | PPI |
| MS.gene012254 | MS.gene010390 | PPI |
| MS.gene010390 | MS.gene026111 | PPI |
| MS.gene055984 | MS.gene010390 | PPI |
| MS.gene051844 | MS.gene010390 | PPI |
| MS.gene018002 | MS.gene010390 | PPI |
| MS.gene40613 | MS.gene010390 | PPI |
| MS.gene051232 | MS.gene010390 | PPI |
| MS.gene52672 | MS.gene010390 | PPI |
| MS.gene04636 | MS.gene010390 | PPI |
| MS.gene24862 | MS.gene010390 | PPI |
| MS.gene010390 | MS.gene012253 | PPI |
| MS.gene010390 | MS.gene85778 | PPI |
| MS.gene37256 | MS.gene010390 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010390.t1 | MTR_5g017850 | 97.853 | 326 | 7 | 0 | 1 | 326 | 1 | 326 | 0.0 | 658 |
| MS.gene010390.t1 | MTR_5g017860 | 92.025 | 326 | 26 | 0 | 1 | 326 | 1 | 326 | 0.0 | 627 |
| MS.gene010390.t1 | MTR_4g125940 | 52.322 | 323 | 143 | 5 | 9 | 326 | 13 | 329 | 1.10e-109 | 322 |
| MS.gene010390.t1 | MTR_7g093370 | 51.534 | 326 | 153 | 4 | 5 | 326 | 47 | 371 | 4.26e-109 | 322 |
| MS.gene010390.t1 | MTR_3g094650 | 51.713 | 321 | 143 | 4 | 11 | 326 | 9 | 322 | 6.01e-109 | 320 |
| MS.gene010390.t1 | MTR_2g084080 | 51.411 | 319 | 146 | 3 | 9 | 326 | 7 | 317 | 8.68e-109 | 320 |
| MS.gene010390.t1 | MTR_2g084110 | 51.212 | 330 | 144 | 5 | 1 | 326 | 1 | 317 | 3.04e-108 | 318 |
| MS.gene010390.t1 | MTR_1g054205 | 51.562 | 320 | 149 | 5 | 11 | 326 | 9 | 326 | 4.01e-108 | 318 |
| MS.gene010390.t1 | MTR_2g084010 | 52.848 | 316 | 136 | 5 | 16 | 326 | 11 | 318 | 4.01e-106 | 313 |
| MS.gene010390.t1 | MTR_2g084020 | 51.360 | 331 | 143 | 6 | 1 | 326 | 1 | 318 | 4.47e-106 | 313 |
| MS.gene010390.t1 | MTR_2g029815 | 50.820 | 305 | 146 | 3 | 25 | 326 | 27 | 330 | 1.62e-105 | 312 |
| MS.gene010390.t1 | MTR_5g074970 | 49.536 | 323 | 152 | 3 | 8 | 326 | 11 | 326 | 3.66e-104 | 308 |
| MS.gene010390.t1 | MTR_7g072480 | 49.383 | 324 | 151 | 5 | 4 | 326 | 5 | 316 | 1.00e-103 | 306 |
| MS.gene010390.t1 | MTR_4g083710 | 48.182 | 330 | 161 | 5 | 1 | 326 | 1 | 324 | 1.96e-103 | 306 |
| MS.gene010390.t1 | MTR_2g084090 | 49.216 | 319 | 151 | 3 | 12 | 326 | 7 | 318 | 2.43e-103 | 306 |
| MS.gene010390.t1 | MTR_2g029560 | 49.843 | 319 | 155 | 4 | 11 | 326 | 9 | 325 | 6.00e-103 | 306 |
| MS.gene010390.t1 | MTR_5g021060 | 52.318 | 302 | 141 | 3 | 27 | 326 | 30 | 330 | 2.56e-102 | 303 |
| MS.gene010390.t1 | MTR_2g029820 | 50.000 | 306 | 147 | 4 | 25 | 326 | 27 | 330 | 2.86e-102 | 304 |
| MS.gene010390.t1 | MTR_5g083860 | 47.866 | 328 | 160 | 4 | 3 | 326 | 5 | 325 | 6.81e-102 | 302 |
| MS.gene010390.t1 | MTR_2g029730 | 50.157 | 319 | 154 | 4 | 11 | 326 | 10 | 326 | 7.57e-102 | 303 |
| MS.gene010390.t1 | MTR_2g040000 | 51.325 | 302 | 138 | 4 | 31 | 326 | 33 | 331 | 1.09e-101 | 302 |
| MS.gene010390.t1 | MTR_2g029800 | 49.508 | 305 | 150 | 3 | 25 | 326 | 27 | 330 | 3.24e-101 | 301 |
| MS.gene010390.t1 | MTR_2g029830 | 48.852 | 305 | 152 | 3 | 25 | 326 | 26 | 329 | 5.82e-101 | 301 |
| MS.gene010390.t1 | MTR_2g028980 | 48.024 | 329 | 163 | 5 | 5 | 326 | 3 | 330 | 3.24e-100 | 299 |
| MS.gene010390.t1 | MTR_3g094670 | 50.157 | 319 | 147 | 4 | 13 | 326 | 11 | 322 | 9.33e-100 | 297 |
| MS.gene010390.t1 | MTR_7g072510 | 48.287 | 321 | 154 | 4 | 7 | 326 | 3 | 312 | 2.13e-99 | 295 |
| MS.gene010390.t1 | MTR_3g466200 | 46.875 | 320 | 160 | 3 | 10 | 326 | 8 | 320 | 2.35e-99 | 296 |
| MS.gene010390.t1 | MTR_2g084000 | 48.598 | 321 | 151 | 5 | 12 | 326 | 7 | 319 | 3.45e-99 | 295 |
| MS.gene010390.t1 | MTR_2g029860 | 47.962 | 319 | 158 | 4 | 15 | 326 | 13 | 330 | 1.12e-98 | 295 |
| MS.gene010390.t1 | MTR_4g074995 | 48.113 | 318 | 144 | 5 | 12 | 326 | 9 | 308 | 1.90e-98 | 293 |
| MS.gene010390.t1 | MTR_8g076820 | 49.841 | 315 | 153 | 4 | 14 | 326 | 19 | 330 | 2.66e-98 | 293 |
| MS.gene010390.t1 | MTR_3g072190 | 47.826 | 322 | 155 | 4 | 10 | 326 | 5 | 318 | 9.32e-98 | 291 |
| MS.gene010390.t1 | MTR_4g122640 | 50.000 | 304 | 147 | 4 | 25 | 326 | 36 | 336 | 1.60e-97 | 291 |
| MS.gene010390.t1 | MTR_2g029910 | 48.197 | 305 | 155 | 2 | 25 | 326 | 28 | 332 | 1.70e-97 | 292 |
| MS.gene010390.t1 | MTR_4g029180 | 49.000 | 300 | 142 | 4 | 30 | 326 | 30 | 321 | 3.88e-97 | 290 |
| MS.gene010390.t1 | MTR_2g029850 | 49.508 | 305 | 150 | 3 | 25 | 326 | 27 | 330 | 4.79e-97 | 291 |
| MS.gene010390.t1 | MTR_4g125940 | 53.986 | 276 | 119 | 4 | 56 | 326 | 2 | 274 | 5.16e-97 | 288 |
| MS.gene010390.t1 | MTR_4g029170 | 45.897 | 329 | 164 | 5 | 4 | 326 | 1 | 321 | 2.09e-96 | 288 |
| MS.gene010390.t1 | MTR_2g029750 | 49.673 | 306 | 148 | 4 | 25 | 326 | 27 | 330 | 4.43e-96 | 288 |
| MS.gene010390.t1 | MTR_3g094630 | 49.216 | 319 | 150 | 4 | 13 | 326 | 11 | 322 | 2.39e-95 | 285 |
| MS.gene010390.t1 | MTR_2g088770 | 44.969 | 318 | 169 | 5 | 11 | 326 | 12 | 325 | 2.11e-93 | 281 |
| MS.gene010390.t1 | MTR_1g115900 | 45.000 | 320 | 161 | 5 | 14 | 326 | 10 | 321 | 2.37e-93 | 281 |
| MS.gene010390.t1 | MTR_1g022970 | 50.667 | 300 | 144 | 3 | 30 | 326 | 49 | 347 | 2.43e-93 | 281 |
| MS.gene010390.t1 | MTR_4g029200 | 48.185 | 303 | 148 | 3 | 25 | 326 | 44 | 338 | 8.94e-93 | 280 |
| MS.gene010390.t1 | MTR_4g046713 | 42.813 | 327 | 185 | 2 | 1 | 326 | 1 | 326 | 1.28e-92 | 279 |
| MS.gene010390.t1 | MTR_2g029740 | 47.386 | 306 | 155 | 4 | 25 | 326 | 27 | 330 | 4.37e-92 | 278 |
| MS.gene010390.t1 | MTR_4g074990 | 45.092 | 326 | 155 | 5 | 4 | 326 | 1 | 305 | 2.49e-91 | 275 |
| MS.gene010390.t1 | MTR_3g466180 | 47.516 | 322 | 160 | 3 | 6 | 326 | 10 | 323 | 6.07e-91 | 274 |
| MS.gene010390.t1 | MTR_5g074740 | 49.074 | 324 | 148 | 10 | 9 | 326 | 9 | 321 | 1.45e-89 | 271 |
| MS.gene010390.t1 | MTR_5g074760 | 48.765 | 324 | 149 | 10 | 9 | 326 | 9 | 321 | 2.21e-89 | 270 |
| MS.gene010390.t1 | MTR_5g074860 | 47.147 | 333 | 159 | 9 | 1 | 325 | 1 | 324 | 9.67e-89 | 269 |
| MS.gene010390.t1 | MTR_4g029190 | 47.267 | 311 | 154 | 4 | 19 | 326 | 37 | 340 | 1.20e-88 | 269 |
| MS.gene010390.t1 | MTR_5g049280 | 45.603 | 307 | 160 | 5 | 26 | 326 | 32 | 337 | 1.49e-88 | 269 |
| MS.gene010390.t1 | MTR_5g074710 | 48.297 | 323 | 150 | 11 | 10 | 326 | 10 | 321 | 3.38e-88 | 267 |
| MS.gene010390.t1 | MTR_7g026990 | 48.148 | 297 | 144 | 4 | 31 | 326 | 35 | 322 | 3.65e-88 | 267 |
| MS.gene010390.t1 | MTR_1g101830 | 40.798 | 326 | 189 | 3 | 1 | 326 | 1 | 322 | 7.47e-88 | 266 |
| MS.gene010390.t1 | MTR_2g008710 | 43.939 | 330 | 176 | 4 | 1 | 326 | 1 | 325 | 2.20e-86 | 263 |
| MS.gene010390.t1 | MTR_5g014100 | 46.278 | 309 | 154 | 5 | 27 | 326 | 26 | 331 | 3.37e-86 | 263 |
| MS.gene010390.t1 | MTR_4g030890 | 46.205 | 303 | 158 | 3 | 25 | 326 | 98 | 396 | 1.01e-84 | 261 |
| MS.gene010390.t1 | MTR_4g133800 | 43.581 | 296 | 158 | 4 | 32 | 326 | 46 | 333 | 1.04e-84 | 259 |
| MS.gene010390.t1 | MTR_3g092990 | 43.396 | 318 | 177 | 3 | 11 | 326 | 10 | 326 | 2.44e-84 | 258 |
| MS.gene010390.t1 | MTR_0155s0040 | 43.046 | 302 | 161 | 4 | 25 | 326 | 25 | 315 | 5.16e-83 | 254 |
| MS.gene010390.t1 | MTR_7g086820 | 44.118 | 306 | 164 | 4 | 21 | 326 | 14 | 312 | 1.30e-82 | 253 |
| MS.gene010390.t1 | MTR_5g022870 | 42.812 | 320 | 175 | 5 | 9 | 326 | 3 | 316 | 1.38e-82 | 253 |
| MS.gene010390.t1 | MTR_4g114210 | 42.633 | 319 | 173 | 4 | 13 | 326 | 7 | 320 | 1.71e-82 | 253 |
| MS.gene010390.t1 | MTR_2g029830 | 49.027 | 257 | 127 | 3 | 73 | 326 | 6 | 261 | 2.51e-82 | 251 |
| MS.gene010390.t1 | MTR_8g075100 | 43.667 | 300 | 163 | 4 | 27 | 326 | 26 | 319 | 7.90e-82 | 251 |
| MS.gene010390.t1 | MTR_4g031140 | 42.284 | 324 | 180 | 5 | 5 | 326 | 6 | 324 | 1.12e-81 | 251 |
| MS.gene010390.t1 | MTR_1g025980 | 43.849 | 317 | 172 | 4 | 9 | 325 | 7 | 317 | 1.33e-81 | 250 |
| MS.gene010390.t1 | MTR_6g027440 | 42.138 | 318 | 178 | 4 | 9 | 326 | 3 | 314 | 1.63e-81 | 250 |
| MS.gene010390.t1 | MTR_7g107520 | 43.533 | 317 | 171 | 6 | 11 | 326 | 11 | 320 | 5.31e-81 | 249 |
| MS.gene010390.t1 | MTR_4g074980 | 43.789 | 322 | 148 | 7 | 7 | 326 | 4 | 294 | 8.30e-81 | 248 |
| MS.gene010390.t1 | MTR_4g074980 | 48.828 | 256 | 121 | 5 | 7 | 258 | 4 | 253 | 8.61e-80 | 243 |
| MS.gene010390.t1 | MTR_2g437770 | 42.857 | 301 | 162 | 4 | 27 | 326 | 50 | 341 | 2.64e-79 | 245 |
| MS.gene010390.t1 | MTR_1g077000 | 39.394 | 330 | 181 | 5 | 5 | 326 | 9 | 327 | 2.86e-79 | 244 |
| MS.gene010390.t1 | MTR_6g043280 | 44.013 | 309 | 159 | 6 | 21 | 326 | 35 | 332 | 4.64e-79 | 244 |
| MS.gene010390.t1 | MTR_3g467600 | 44.172 | 326 | 168 | 7 | 7 | 326 | 7 | 324 | 1.57e-78 | 243 |
| MS.gene010390.t1 | MTR_3g072190 | 48.450 | 258 | 124 | 3 | 70 | 326 | 2 | 251 | 3.14e-77 | 237 |
| MS.gene010390.t1 | MTR_2g008160 | 42.020 | 307 | 168 | 5 | 25 | 326 | 22 | 323 | 4.15e-77 | 239 |
| MS.gene010390.t1 | MTR_1g009750 | 40.187 | 321 | 186 | 4 | 10 | 326 | 10 | 328 | 4.02e-76 | 236 |
| MS.gene010390.t1 | MTR_6g043240 | 43.182 | 308 | 161 | 5 | 21 | 326 | 36 | 331 | 8.84e-75 | 234 |
| MS.gene010390.t1 | MTR_1g090760 | 39.938 | 323 | 187 | 6 | 10 | 326 | 9 | 330 | 1.80e-74 | 233 |
| MS.gene010390.t1 | MTR_1g086320 | 39.697 | 330 | 195 | 4 | 1 | 326 | 4 | 333 | 7.05e-74 | 231 |
| MS.gene010390.t1 | MTR_1g038680 | 42.000 | 300 | 170 | 4 | 31 | 326 | 33 | 332 | 1.77e-73 | 230 |
| MS.gene010390.t1 | MTR_3g092990 | 41.195 | 318 | 173 | 4 | 11 | 326 | 10 | 315 | 1.47e-72 | 227 |
| MS.gene010390.t1 | MTR_7g029030 | 40.523 | 306 | 168 | 5 | 26 | 326 | 24 | 320 | 1.57e-72 | 227 |
| MS.gene010390.t1 | MTR_7g086870 | 40.667 | 300 | 168 | 4 | 27 | 326 | 22 | 311 | 3.31e-71 | 223 |
| MS.gene010390.t1 | MTR_1g086490 | 38.757 | 338 | 194 | 5 | 1 | 326 | 4 | 340 | 3.60e-71 | 224 |
| MS.gene010390.t1 | MTR_5g074860 | 43.114 | 334 | 132 | 11 | 1 | 325 | 1 | 285 | 1.26e-69 | 219 |
| MS.gene010390.t1 | MTR_4g087965 | 37.353 | 340 | 192 | 6 | 4 | 322 | 3 | 342 | 1.30e-69 | 221 |
| MS.gene010390.t1 | MTR_2g008730 | 40.181 | 331 | 163 | 6 | 1 | 326 | 1 | 301 | 5.46e-69 | 218 |
| MS.gene010390.t1 | MTR_5g016010 | 35.692 | 325 | 197 | 6 | 11 | 325 | 6 | 328 | 7.12e-67 | 213 |
| MS.gene010390.t1 | MTR_2g099175 | 40.196 | 306 | 173 | 5 | 26 | 326 | 35 | 335 | 2.17e-66 | 212 |
| MS.gene010390.t1 | MTR_2g067440 | 37.462 | 331 | 175 | 7 | 25 | 325 | 58 | 386 | 2.49e-66 | 213 |
| MS.gene010390.t1 | MTR_4g127670 | 39.869 | 306 | 174 | 6 | 26 | 326 | 23 | 323 | 9.52e-66 | 210 |
| MS.gene010390.t1 | MTR_3g105790 | 38.462 | 325 | 192 | 5 | 5 | 326 | 3 | 322 | 1.77e-65 | 209 |
| MS.gene010390.t1 | MTR_8g062780 | 36.923 | 325 | 201 | 4 | 4 | 326 | 2 | 324 | 2.16e-65 | 209 |
| MS.gene010390.t1 | MTR_6g043460 | 39.610 | 308 | 175 | 4 | 21 | 326 | 30 | 328 | 5.55e-65 | 209 |
| MS.gene010390.t1 | MTR_1g009750 | 37.304 | 319 | 181 | 5 | 10 | 326 | 10 | 311 | 3.76e-63 | 203 |
| MS.gene010390.t1 | MTR_2g078610 | 36.061 | 330 | 178 | 6 | 25 | 322 | 74 | 402 | 1.80e-62 | 204 |
| MS.gene010390.t1 | MTR_2g077990 | 37.425 | 334 | 168 | 9 | 25 | 322 | 74 | 402 | 2.54e-62 | 204 |
| MS.gene010390.t1 | MTR_2g008160 | 37.459 | 307 | 147 | 5 | 25 | 326 | 22 | 288 | 4.84e-61 | 196 |
| MS.gene010390.t1 | MTR_4g095450 | 37.224 | 317 | 187 | 6 | 10 | 322 | 12 | 320 | 5.68e-61 | 197 |
| MS.gene010390.t1 | MTR_5g033470 | 36.859 | 312 | 180 | 6 | 26 | 326 | 72 | 377 | 1.64e-60 | 198 |
| MS.gene010390.t1 | MTR_0286s0010 | 33.951 | 324 | 201 | 5 | 10 | 326 | 17 | 334 | 3.92e-59 | 193 |
| MS.gene010390.t1 | MTR_6g008075 | 33.951 | 324 | 201 | 5 | 10 | 326 | 17 | 334 | 3.92e-59 | 193 |
| MS.gene010390.t1 | MTR_4g132490 | 35.314 | 303 | 191 | 4 | 26 | 326 | 28 | 327 | 1.62e-58 | 191 |
| MS.gene010390.t1 | MTR_2g078280 | 35.737 | 319 | 172 | 6 | 25 | 311 | 74 | 391 | 1.93e-56 | 188 |
| MS.gene010390.t1 | MTR_0147s0010 | 34.062 | 320 | 175 | 6 | 27 | 325 | 77 | 381 | 4.22e-55 | 184 |
| MS.gene010390.t1 | MTR_2g067450 | 36.275 | 306 | 185 | 7 | 25 | 325 | 9 | 309 | 2.47e-52 | 175 |
| MS.gene010390.t1 | MTR_2g008160 | 47.904 | 167 | 84 | 2 | 25 | 191 | 22 | 185 | 2.05e-51 | 169 |
| MS.gene010390.t1 | MTR_1g066710 | 32.680 | 306 | 195 | 5 | 25 | 326 | 25 | 323 | 1.42e-49 | 168 |
| MS.gene010390.t1 | MTR_1g066640 | 33.442 | 308 | 190 | 5 | 25 | 326 | 25 | 323 | 1.78e-47 | 162 |
| MS.gene010390.t1 | MTR_4g132110 | 32.343 | 303 | 196 | 4 | 27 | 326 | 32 | 328 | 6.80e-47 | 161 |
| MS.gene010390.t1 | MTR_1g066380 | 32.459 | 305 | 197 | 4 | 25 | 326 | 25 | 323 | 7.24e-47 | 161 |
| MS.gene010390.t1 | MTR_1g066680 | 33.657 | 309 | 187 | 6 | 25 | 326 | 25 | 322 | 1.72e-45 | 157 |
| MS.gene010390.t1 | MTR_4g132110 | 32.143 | 308 | 195 | 5 | 27 | 326 | 32 | 333 | 2.09e-45 | 157 |
| MS.gene010390.t1 | MTR_7g072490 | 41.277 | 235 | 75 | 3 | 73 | 306 | 2 | 174 | 3.16e-45 | 153 |
| MS.gene010390.t1 | MTR_3g105790 | 42.194 | 237 | 131 | 5 | 94 | 326 | 12 | 246 | 3.69e-45 | 154 |
| MS.gene010390.t1 | MTR_5g074700 | 41.991 | 231 | 109 | 8 | 100 | 326 | 5 | 214 | 8.81e-45 | 152 |
| MS.gene010390.t1 | MTR_3g072260 | 59.292 | 113 | 46 | 0 | 26 | 138 | 25 | 137 | 1.41e-41 | 141 |
| MS.gene010390.t1 | MTR_3g072210 | 41.361 | 191 | 101 | 5 | 139 | 326 | 56 | 238 | 1.63e-37 | 134 |
| MS.gene010390.t1 | MTR_2g029880 | 40.415 | 193 | 101 | 4 | 137 | 326 | 7 | 188 | 3.19e-37 | 132 |
| MS.gene010390.t1 | MTR_1g066380 | 31.660 | 259 | 168 | 4 | 71 | 326 | 3 | 255 | 2.23e-34 | 126 |
| MS.gene010390.t1 | MTR_2g077980 | 31.673 | 281 | 143 | 10 | 89 | 326 | 11 | 285 | 2.05e-29 | 114 |
| MS.gene010390.t1 | MTR_7g086790 | 34.392 | 189 | 102 | 5 | 74 | 262 | 17 | 183 | 2.91e-26 | 103 |
| MS.gene010390.t1 | MTR_2g078560 | 28.829 | 222 | 127 | 4 | 132 | 322 | 95 | 316 | 2.21e-23 | 98.6 |
| MS.gene010390.t1 | MTR_1g089005 | 42.520 | 127 | 63 | 3 | 16 | 133 | 1 | 126 | 1.57e-21 | 89.7 |
| MS.gene010390.t1 | MTR_5g058120 | 35.366 | 164 | 94 | 3 | 161 | 324 | 6 | 157 | 1.69e-21 | 92.0 |
| MS.gene010390.t1 | MTR_4g114220 | 54.444 | 90 | 31 | 2 | 47 | 136 | 23 | 102 | 1.86e-21 | 89.0 |
| MS.gene010390.t1 | MTR_6g048160 | 59.155 | 71 | 25 | 2 | 66 | 136 | 22 | 88 | 3.38e-20 | 84.0 |
| MS.gene010390.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 190 | 326 | 9 | 149 | 1.53e-18 | 81.3 |
| MS.gene010390.t1 | MTR_2g029930 | 44.118 | 102 | 29 | 3 | 25 | 112 | 17 | 104 | 8.19e-18 | 78.2 |
| MS.gene010390.t1 | MTR_7g086810 | 35.294 | 119 | 51 | 1 | 27 | 145 | 6 | 98 | 2.10e-15 | 74.7 |
| MS.gene010390.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 88 | 260 | 3 | 131 | 8.45e-15 | 70.9 |
| MS.gene010390.t1 | MTR_5g074770 | 47.191 | 89 | 44 | 3 | 239 | 325 | 21 | 108 | 2.67e-14 | 68.6 |
| MS.gene010390.t1 | MTR_1g098320 | 42.105 | 76 | 44 | 0 | 251 | 326 | 49 | 124 | 4.33e-14 | 68.9 |
| MS.gene010390.t1 | MTR_7g107500 | 41.667 | 84 | 48 | 1 | 243 | 326 | 15 | 97 | 5.93e-14 | 67.4 |
| MS.gene010390.t1 | MTR_7g086785 | 45.205 | 73 | 39 | 1 | 73 | 145 | 4 | 75 | 3.90e-13 | 66.2 |
| MS.gene010390.t1 | MTR_4g012865 | 38.235 | 68 | 42 | 0 | 27 | 94 | 77 | 144 | 1.44e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010390.t1 | AT1G49570 | 63.696 | 303 | 107 | 2 | 23 | 322 | 44 | 346 | 4.43e-135 | 387 |
| MS.gene010390.t1 | AT5G19890 | 54.740 | 327 | 138 | 4 | 4 | 326 | 7 | 327 | 1.16e-117 | 342 |
| MS.gene010390.t1 | AT5G06730 | 55.229 | 306 | 131 | 4 | 25 | 326 | 31 | 334 | 3.79e-113 | 332 |
| MS.gene010390.t1 | AT5G06720 | 50.464 | 323 | 152 | 4 | 11 | 326 | 12 | 333 | 2.43e-107 | 317 |
| MS.gene010390.t1 | AT4G36430 | 49.175 | 303 | 151 | 3 | 26 | 326 | 29 | 330 | 7.61e-104 | 308 |
| MS.gene010390.t1 | AT2G18150 | 46.061 | 330 | 164 | 4 | 10 | 326 | 8 | 336 | 2.82e-102 | 304 |
| MS.gene010390.t1 | AT2G38390 | 49.051 | 316 | 156 | 4 | 15 | 326 | 19 | 333 | 1.49e-100 | 300 |
| MS.gene010390.t1 | AT5G05340 | 47.231 | 307 | 153 | 3 | 22 | 326 | 25 | 324 | 6.29e-99 | 295 |
| MS.gene010390.t1 | AT1G44970 | 51.475 | 305 | 144 | 3 | 25 | 326 | 43 | 346 | 7.42e-99 | 295 |
| MS.gene010390.t1 | AT2G18140 | 48.344 | 302 | 153 | 3 | 27 | 326 | 35 | 335 | 3.10e-98 | 293 |
| MS.gene010390.t1 | AT3G32980 | 47.950 | 317 | 159 | 4 | 15 | 326 | 19 | 334 | 8.83e-96 | 288 |
| MS.gene010390.t1 | AT3G49120 | 46.749 | 323 | 166 | 4 | 9 | 326 | 14 | 335 | 3.62e-95 | 286 |
| MS.gene010390.t1 | AT1G14550 | 45.794 | 321 | 163 | 5 | 10 | 326 | 8 | 321 | 9.04e-95 | 284 |
| MS.gene010390.t1 | AT5G58400 | 44.880 | 332 | 170 | 4 | 1 | 326 | 1 | 325 | 3.09e-93 | 280 |
| MS.gene010390.t1 | AT3G49110 | 46.749 | 323 | 166 | 4 | 9 | 326 | 15 | 336 | 5.96e-93 | 281 |
| MS.gene010390.t1 | AT1G68850 | 44.892 | 323 | 170 | 6 | 11 | 326 | 14 | 335 | 1.01e-92 | 279 |
| MS.gene010390.t1 | AT2G38380 | 47.188 | 320 | 164 | 4 | 11 | 326 | 15 | 333 | 1.56e-92 | 279 |
| MS.gene010390.t1 | AT4G16270 | 48.675 | 302 | 150 | 4 | 27 | 326 | 50 | 348 | 6.47e-92 | 278 |
| MS.gene010390.t1 | AT5G19880 | 46.809 | 329 | 167 | 6 | 4 | 326 | 3 | 329 | 1.07e-91 | 276 |
| MS.gene010390.t1 | AT1G14540 | 46.203 | 316 | 158 | 5 | 16 | 326 | 7 | 315 | 1.31e-91 | 276 |
| MS.gene010390.t1 | AT4G08780 | 47.419 | 310 | 157 | 4 | 22 | 326 | 19 | 327 | 1.50e-91 | 277 |
| MS.gene010390.t1 | AT3G03670 | 44.923 | 325 | 170 | 4 | 6 | 326 | 2 | 321 | 7.83e-91 | 274 |
| MS.gene010390.t1 | AT4G08770 | 47.742 | 310 | 156 | 4 | 22 | 326 | 19 | 327 | 9.48e-91 | 275 |
| MS.gene010390.t1 | AT5G66390 | 44.073 | 329 | 173 | 5 | 8 | 326 | 6 | 333 | 2.05e-90 | 273 |
| MS.gene010390.t1 | AT1G05260 | 43.769 | 329 | 178 | 7 | 1 | 326 | 1 | 325 | 1.17e-89 | 271 |
| MS.gene010390.t1 | AT5G15180 | 45.370 | 324 | 161 | 7 | 15 | 326 | 10 | 329 | 1.68e-89 | 271 |
| MS.gene010390.t1 | AT3G50990 | 45.511 | 323 | 170 | 4 | 9 | 326 | 20 | 341 | 2.44e-89 | 271 |
| MS.gene010390.t1 | AT5G51890 | 41.304 | 322 | 186 | 2 | 5 | 326 | 4 | 322 | 6.23e-89 | 269 |
| MS.gene010390.t1 | AT3G01190 | 45.511 | 323 | 170 | 6 | 5 | 326 | 4 | 321 | 1.20e-88 | 268 |
| MS.gene010390.t1 | AT5G58390 | 46.082 | 319 | 162 | 3 | 11 | 326 | 5 | 316 | 2.74e-88 | 267 |
| MS.gene010390.t1 | AT4G11290 | 45.902 | 305 | 161 | 4 | 25 | 326 | 23 | 326 | 3.20e-88 | 268 |
| MS.gene010390.t1 | AT2G35380 | 43.402 | 341 | 167 | 6 | 4 | 326 | 3 | 335 | 4.95e-85 | 259 |
| MS.gene010390.t1 | AT3G21770 | 44.333 | 300 | 163 | 4 | 25 | 322 | 27 | 324 | 5.95e-85 | 259 |
| MS.gene010390.t1 | AT5G17820 | 41.745 | 321 | 177 | 4 | 6 | 326 | 3 | 313 | 3.41e-84 | 257 |
| MS.gene010390.t1 | AT5G64120 | 42.462 | 325 | 174 | 5 | 9 | 326 | 10 | 328 | 1.27e-83 | 256 |
| MS.gene010390.t1 | AT2G22420 | 43.614 | 321 | 172 | 6 | 8 | 326 | 6 | 319 | 6.58e-83 | 254 |
| MS.gene010390.t1 | AT5G17820 | 41.745 | 321 | 177 | 4 | 6 | 326 | 56 | 366 | 7.16e-83 | 255 |
| MS.gene010390.t1 | AT5G42180 | 41.195 | 318 | 182 | 3 | 8 | 325 | 4 | 316 | 2.39e-80 | 247 |
| MS.gene010390.t1 | AT4G25980 | 41.694 | 307 | 170 | 4 | 25 | 326 | 24 | 326 | 1.47e-79 | 245 |
| MS.gene010390.t1 | AT2G41480 | 42.462 | 325 | 175 | 7 | 8 | 326 | 10 | 328 | 3.05e-79 | 244 |
| MS.gene010390.t1 | AT1G05240 | 42.761 | 297 | 162 | 6 | 30 | 322 | 29 | 321 | 4.39e-79 | 244 |
| MS.gene010390.t1 | AT1G05250 | 42.761 | 297 | 162 | 6 | 30 | 322 | 29 | 321 | 4.39e-79 | 244 |
| MS.gene010390.t1 | AT5G39580 | 42.320 | 319 | 174 | 6 | 9 | 326 | 10 | 319 | 1.99e-77 | 239 |
| MS.gene010390.t1 | AT4G33420 | 41.503 | 306 | 168 | 4 | 21 | 326 | 31 | 325 | 1.24e-76 | 238 |
| MS.gene010390.t1 | AT4G26010 | 41.139 | 316 | 170 | 6 | 12 | 326 | 37 | 337 | 1.38e-76 | 238 |
| MS.gene010390.t1 | AT4G26010 | 41.139 | 316 | 170 | 6 | 12 | 326 | 9 | 309 | 1.48e-76 | 237 |
| MS.gene010390.t1 | AT4G33420 | 41.503 | 306 | 168 | 4 | 21 | 326 | 78 | 372 | 4.85e-76 | 238 |
| MS.gene010390.t1 | AT1G77100 | 41.231 | 325 | 175 | 7 | 9 | 326 | 4 | 319 | 2.09e-75 | 234 |
| MS.gene010390.t1 | AT4G33870 | 37.538 | 333 | 172 | 4 | 25 | 322 | 66 | 397 | 3.93e-74 | 234 |
| MS.gene010390.t1 | AT1G30870 | 41.254 | 303 | 167 | 4 | 27 | 326 | 51 | 345 | 1.52e-73 | 231 |
| MS.gene010390.t1 | AT1G71695 | 38.762 | 307 | 178 | 4 | 23 | 326 | 40 | 339 | 2.72e-73 | 230 |
| MS.gene010390.t1 | AT2G24800 | 42.997 | 307 | 164 | 5 | 25 | 326 | 29 | 329 | 2.64e-72 | 227 |
| MS.gene010390.t1 | AT3G49960 | 39.077 | 325 | 189 | 6 | 9 | 326 | 7 | 329 | 2.19e-71 | 224 |
| MS.gene010390.t1 | AT4G37530 | 41.100 | 309 | 177 | 4 | 22 | 326 | 22 | 329 | 4.24e-71 | 224 |
| MS.gene010390.t1 | AT5G64100 | 40.728 | 302 | 168 | 5 | 28 | 326 | 38 | 331 | 5.82e-71 | 223 |
| MS.gene010390.t1 | AT2G18980 | 38.318 | 321 | 187 | 6 | 11 | 326 | 9 | 323 | 8.61e-71 | 223 |
| MS.gene010390.t1 | AT5G67400 | 39.739 | 307 | 178 | 5 | 25 | 326 | 25 | 329 | 3.87e-70 | 221 |
| MS.gene010390.t1 | AT5G47000 | 36.842 | 323 | 193 | 5 | 10 | 326 | 13 | 330 | 5.44e-70 | 221 |
| MS.gene010390.t1 | AT3G28200 | 39.286 | 308 | 171 | 4 | 25 | 326 | 19 | 316 | 1.28e-69 | 219 |
| MS.gene010390.t1 | AT4G31760 | 40.248 | 323 | 179 | 7 | 11 | 326 | 11 | 326 | 1.38e-69 | 220 |
| MS.gene010390.t1 | AT5G64110 | 40.803 | 299 | 168 | 6 | 31 | 326 | 38 | 330 | 1.54e-69 | 220 |
| MS.gene010390.t1 | AT2G34060 | 37.273 | 330 | 191 | 5 | 10 | 323 | 14 | 343 | 4.56e-69 | 219 |
| MS.gene010390.t1 | AT4G17690 | 39.274 | 303 | 175 | 4 | 27 | 326 | 26 | 322 | 9.64e-69 | 218 |
| MS.gene010390.t1 | AT4G37520 | 39.542 | 306 | 180 | 4 | 25 | 326 | 25 | 329 | 1.84e-68 | 217 |
| MS.gene010390.t1 | AT5G14130 | 37.994 | 329 | 191 | 6 | 5 | 326 | 8 | 330 | 2.98e-68 | 216 |
| MS.gene010390.t1 | AT5G14130 | 37.994 | 329 | 191 | 6 | 5 | 326 | 49 | 371 | 5.26e-68 | 217 |
| MS.gene010390.t1 | AT5G24070 | 40.132 | 304 | 170 | 6 | 28 | 326 | 39 | 335 | 2.05e-67 | 215 |
| MS.gene010390.t1 | AT1G34510 | 38.365 | 318 | 180 | 6 | 10 | 326 | 7 | 309 | 4.30e-66 | 210 |
| MS.gene010390.t1 | AT2G39040 | 41.234 | 308 | 172 | 7 | 26 | 326 | 45 | 350 | 7.15e-66 | 211 |
| MS.gene010390.t1 | AT4G37520 | 38.889 | 306 | 179 | 5 | 25 | 326 | 25 | 326 | 9.56e-66 | 210 |
| MS.gene010390.t1 | AT2G43480 | 40.461 | 304 | 169 | 6 | 28 | 326 | 39 | 335 | 9.96e-66 | 210 |
| MS.gene010390.t1 | AT4G30170 | 36.570 | 309 | 185 | 6 | 23 | 326 | 23 | 325 | 1.12e-65 | 210 |
| MS.gene010390.t1 | AT5G40150 | 36.688 | 308 | 180 | 4 | 25 | 326 | 30 | 328 | 4.93e-63 | 203 |
| MS.gene010390.t1 | AT5G22410 | 36.503 | 326 | 195 | 8 | 4 | 324 | 5 | 323 | 1.68e-62 | 202 |
| MS.gene010390.t1 | AT2G35380 | 43.254 | 252 | 121 | 5 | 89 | 326 | 4 | 247 | 7.17e-60 | 192 |
| MS.gene010390.t1 | AT4G37530 | 41.923 | 260 | 146 | 4 | 22 | 277 | 22 | 280 | 1.10e-59 | 193 |
| MS.gene010390.t1 | AT1G24110 | 36.667 | 330 | 183 | 9 | 12 | 326 | 4 | 322 | 9.57e-57 | 187 |
| MS.gene010390.t1 | AT4G21960 | 33.663 | 303 | 192 | 4 | 27 | 326 | 31 | 327 | 1.15e-50 | 171 |
| MS.gene010390.t1 | AT2G37130 | 34.853 | 307 | 186 | 7 | 26 | 326 | 29 | 327 | 8.65e-50 | 169 |
| MS.gene010390.t1 | AT2G37130 | 34.983 | 303 | 183 | 7 | 30 | 326 | 2 | 296 | 1.43e-49 | 167 |
| MS.gene010390.t1 | AT4G25980 | 46.243 | 173 | 90 | 2 | 25 | 197 | 69 | 238 | 5.26e-49 | 166 |
| MS.gene010390.t1 | AT3G17070 | 32.673 | 303 | 200 | 4 | 27 | 326 | 38 | 339 | 1.05e-47 | 164 |
| MS.gene010390.t1 | AT5G39580 | 45.078 | 193 | 99 | 3 | 9 | 201 | 10 | 195 | 1.81e-47 | 160 |
| MS.gene010390.t1 | AT2G24800 | 44.509 | 173 | 89 | 3 | 25 | 195 | 29 | 196 | 8.13e-39 | 137 |
| MS.gene010390.t1 | AT3G17070 | 31.034 | 261 | 175 | 5 | 69 | 326 | 18 | 276 | 7.92e-33 | 123 |
| MS.gene010390.t1 | AT3G42570 | 33.333 | 138 | 77 | 5 | 56 | 189 | 20 | 146 | 1.42e-12 | 65.1 |
Find 62 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAGTAAAGGGCCATTT+TGG | 0.134765 | 5.4:-10852582 | MS.gene010390:intron |
| TGCAGTTTCCGTTGAGAAAA+TGG | 0.188621 | 5.4:-10851879 | MS.gene010390:CDS |
| TACTGCCAAGTTCGTTTCTA+AGG | 0.195982 | 5.4:-10852470 | MS.gene010390:CDS |
| AGCTGATTCCGACTCCAATT+TGG | 0.302493 | 5.4:-10852068 | MS.gene010390:CDS |
| ACAATCAGACCAAGCTCTAT+TGG | 0.304491 | 5.4:-10851969 | MS.gene010390:CDS |
| GATGATACGGACACACTAAA+AGG | 0.311071 | 5.4:-10852911 | MS.gene010390:CDS |
| TGGTGTTCTTGCGGGACAAC+AGG | 0.315941 | 5.4:-10851849 | MS.gene010390:CDS |
| AGGATCCAACGGAGCCAAAT+TGG | 0.341029 | 5.4:+10852054 | None:intergenic |
| GGTCGCATTGGTGTTCTTGC+GGG | 0.352206 | 5.4:-10851857 | MS.gene010390:CDS |
| TTCTTTAATTTCAGAGTAAA+GGG | 0.356179 | 5.4:-10852591 | MS.gene010390:intron |
| GAGTCGGAATCAGCTTGATT+TGG | 0.362486 | 5.4:+10852076 | None:intergenic |
| TATACAGGTGCACACACCTT+TGG | 0.364289 | 5.4:-10852208 | MS.gene010390:intron |
| CGACTCCAATTTGGCTCCGT+TGG | 0.365758 | 5.4:-10852059 | MS.gene010390:CDS |
| CGGGACAACAGGGTCAAATA+AGG | 0.380062 | 5.4:-10851838 | MS.gene010390:CDS |
| CTTCTTTAATTTCAGAGTAA+AGG | 0.385010 | 5.4:-10852592 | MS.gene010390:intron |
| CCAAGAGGTACAGCCCAAAA+TGG | 0.386408 | 5.4:+10852568 | None:intergenic |
| CAATCAGACCAAGCTCTATT+GGG | 0.411380 | 5.4:-10851968 | MS.gene010390:CDS |
| ATACAGGTGCACACACCTTT+GGG | 0.413975 | 5.4:-10852207 | MS.gene010390:intron |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.4:+10853106 | None:intergenic |
| AAGCGATGGATCAGATTTAC+CGG | 0.429554 | 5.4:+10852135 | None:intergenic |
| ATATCTAGGTTCCTAGTTAA+CGG | 0.439967 | 5.4:+10851802 | None:intergenic |
| TTACATTGACAAAACAATCA+TGG | 0.440947 | 5.4:+10853063 | None:intergenic |
| TTCTAAGGGTCTTGAAAAGA+AGG | 0.446455 | 5.4:-10852455 | MS.gene010390:CDS |
| GCAGTTTCCGTTGAGAAAAT+GGG | 0.456734 | 5.4:-10851878 | MS.gene010390:CDS |
| CTATTCGACTTTGGTGGCTC+CGG | 0.463524 | 5.4:-10852154 | MS.gene010390:CDS |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.4:-10852933 | MS.gene010390:CDS |
| TTCTAGAGGTTCAAAGGGTG+AGG | 0.465492 | 5.4:+10852498 | None:intergenic |
| AAATTGTAGGGCCGTTAACT+AGG | 0.473141 | 5.4:-10851813 | None:intergenic |
| AAGCCAAGGCTATTCGACTT+TGG | 0.481179 | 5.4:-10852163 | MS.gene010390:CDS |
| CAAAACAATCATGGAAATGA+AGG | 0.485397 | 5.4:+10853072 | None:intergenic |
| ATGATACGGACACACTAAAA+GGG | 0.487747 | 5.4:-10852910 | MS.gene010390:CDS |
| GGGTCGCATTGGTGTTCTTG+CGG | 0.499888 | 5.4:-10851858 | MS.gene010390:CDS |
| TCAAATGTGTTCGTAGTGAC+AGG | 0.502481 | 5.4:+10852034 | None:intergenic |
| TACTAGAAATACAGCATCCC+TGG | 0.511005 | 5.4:+10852763 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.4:-10852436 | MS.gene010390:intron |
| CCAAGGCTATTCGACTTTGG+TGG | 0.513944 | 5.4:-10852160 | MS.gene010390:CDS |
| TGTGTTACATAGGGATGTGA+TGG | 0.525846 | 5.4:-10852947 | MS.gene010390:intron |
| GTACCTCTTGGTCGTAGAGA+TGG | 0.545618 | 5.4:-10852556 | MS.gene010390:CDS |
| CCACCAAAGTCGAATAGCCT+TGG | 0.547775 | 5.4:+10852160 | None:intergenic |
| ATCTGTGCTACTGGATGATA+CGG | 0.551787 | 5.4:-10852924 | MS.gene010390:CDS |
| ACTGCCAAGTTCGTTTCTAA+GGG | 0.553364 | 5.4:-10852469 | MS.gene010390:CDS |
| TATTGTCACCCAATAGAGCT+TGG | 0.556737 | 5.4:+10851960 | None:intergenic |
| ATATACTTACTCTAGCAGCC+AGG | 0.559698 | 5.4:-10852781 | MS.gene010390:CDS |
| AAGACCCTTAGAAACGAACT+TGG | 0.562544 | 5.4:+10852465 | None:intergenic |
| GTTGAGAAAATGGGTCGCAT+TGG | 0.578115 | 5.4:-10851869 | MS.gene010390:CDS |
| TCTAGAGGTTCAAAGGGTGA+GGG | 0.582918 | 5.4:+10852499 | None:intergenic |
| TGACAATACAACTTCTGCAT+TGG | 0.583252 | 5.4:-10851945 | MS.gene010390:CDS |
| AATGCTTTACATTCAAGCCA+AGG | 0.586439 | 5.4:-10852177 | MS.gene010390:CDS |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.4:-10853115 | MS.gene010390:CDS |
| TGGTTGACAATTATAGCAAG+TGG | 0.599280 | 5.4:-10851925 | MS.gene010390:CDS |
| TATAGTTGAGAGCACACAAG+TGG | 0.607834 | 5.4:+10853200 | None:intergenic |
| CAACGGAGCCAAATTGGAGT+CGG | 0.611523 | 5.4:+10852060 | None:intergenic |
| TATACTTACTCTAGCAGCCA+GGG | 0.615867 | 5.4:-10852780 | MS.gene010390:CDS |
| TCAGCACATGAGACTGTGGA+TGG | 0.616095 | 5.4:+10852803 | None:intergenic |
| AAAGCATTGCGCGAACCCAA+AGG | 0.619184 | 5.4:+10852192 | None:intergenic |
| GGTGTTCTTGCGGGACAACA+GGG | 0.632444 | 5.4:-10851848 | MS.gene010390:CDS |
| TTCGTAGTGACAGGATCCAA+CGG | 0.634025 | 5.4:+10852043 | None:intergenic |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.4:+10852528 | None:intergenic |
| TGATACGGACACACTAAAAG+GGG | 0.644413 | 5.4:-10852909 | MS.gene010390:CDS |
| AGAAGTGAAGAATCAAGCGA+TGG | 0.646260 | 5.4:+10852121 | None:intergenic |
| TATATCAGCACATGAGACTG+TGG | 0.660979 | 5.4:+10852799 | None:intergenic |
| GTGCCATCTCTACGACCAAG+AGG | 0.689151 | 5.4:+10852553 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGCTATTTATATACT+CGG | - | chr5.4:10852064-10852083 | MS.gene010390:CDS | 15.0% |
| !! | CCTAATAAAAATTCAATAAG+AGG | - | chr5.4:10852202-10852221 | MS.gene010390:CDS | 20.0% |
| !! | TAACTTTATGTATACAAGAA+AGG | + | chr5.4:10852802-10852821 | None:intergenic | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.4:10853249-10853268 | MS.gene010390:CDS | 20.0% |
| !!! | AAATCTCTAAAAAACAGAAT+AGG | + | chr5.4:10853175-10853194 | None:intergenic | 20.0% |
| !!! | AAGAAGTTCTGATTAATAAT+TGG | + | chr5.4:10852468-10852487 | None:intergenic | 20.0% |
| !!! | ATTTCATTTTTGTGTTACAT+AGG | - | chr5.4:10852117-10852136 | MS.gene010390:CDS | 20.0% |
| !!! | CCTCTTATTGAATTTTTATT+AGG | + | chr5.4:10852205-10852224 | None:intergenic | 20.0% |
| !!! | TACTATATGATAATGTTTCT+GGG | - | chr5.4:10852384-10852403 | MS.gene010390:intron | 20.0% |
| !!! | TTAACAATTTTGTTCAGATT+TGG | + | chr5.4:10851925-10851944 | None:intergenic | 20.0% |
| !!! | TTACTATATGATAATGTTTC+TGG | - | chr5.4:10852383-10852402 | MS.gene010390:intron | 20.0% |
| !!! | TTCTTTAATTTCAGAGTAAA+GGG | - | chr5.4:10852483-10852502 | MS.gene010390:CDS | 20.0% |
| !!! | TTTCATTTTTGTGTTACATA+GGG | - | chr5.4:10852118-10852137 | MS.gene010390:CDS | 20.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.4:10853248-10853267 | MS.gene010390:CDS | 25.0% |
| ! | TTAATTATTTGGAGACTACT+TGG | - | chr5.4:10852346-10852365 | MS.gene010390:intron | 25.0% |
| ! | TTACATTGACAAAACAATCA+TGG | + | chr5.4:10852014-10852033 | None:intergenic | 25.0% |
| ! | TTCTAACTCTAATGATCATA+AGG | - | chr5.4:10852775-10852794 | MS.gene010390:CDS | 25.0% |
| !! | ACTATATGATAATGTTTCTG+GGG | - | chr5.4:10852385-10852404 | MS.gene010390:intron | 25.0% |
| !! | CTTCTTTAATTTCAGAGTAA+AGG | - | chr5.4:10852482-10852501 | MS.gene010390:CDS | 25.0% |
| !!! | AAAAATGTTTTGAGCAATTC+TGG | - | chr5.4:10853076-10853095 | MS.gene010390:CDS | 25.0% |
| !!! | AAAATGTTTTGAGCAATTCT+GGG | - | chr5.4:10853077-10853096 | MS.gene010390:CDS | 25.0% |
| !!! | TTATGTTATCGTCATTTTCA+AGG | - | chr5.4:10852743-10852762 | MS.gene010390:intron | 25.0% |
| CAAAACAATCATGGAAATGA+AGG | + | chr5.4:10852005-10852024 | None:intergenic | 30.0% | |
| GAACTCGCTGTTTAATTATT+TGG | - | chr5.4:10852335-10852354 | MS.gene010390:intron | 30.0% | |
| GACGATAACATAATTCGAAT+AGG | + | chr5.4:10852736-10852755 | None:intergenic | 30.0% | |
| GTAGTCAATACACATGAAAT+TGG | + | chr5.4:10852834-10852853 | None:intergenic | 30.0% | |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.4:10852585-10852604 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.4:10852584-10852603 | None:intergenic | 30.0% |
| AATGCTTTACATTCAAGCCA+AGG | - | chr5.4:10852897-10852916 | MS.gene010390:CDS | 35.0% | |
| ATGATACGGACACACTAAAA+GGG | - | chr5.4:10852164-10852183 | MS.gene010390:CDS | 35.0% | |
| TACGCACTCTCAATATATAC+AGG | - | chr5.4:10852851-10852870 | MS.gene010390:CDS | 35.0% | |
| TGACAATACAACTTCTGCAT+TGG | - | chr5.4:10853129-10853148 | MS.gene010390:CDS | 35.0% | |
| TGGTTGACAATTATAGCAAG+TGG | - | chr5.4:10853149-10853168 | MS.gene010390:CDS | 35.0% | |
| ! | TTCTAAGGGTCTTGAAAAGA+AGG | - | chr5.4:10852619-10852638 | MS.gene010390:intron | 35.0% |
| ! | TTGGCAGTAATGTTTTCTAG+AGG | + | chr5.4:10852593-10852612 | None:intergenic | 35.0% |
| AAGACCCTTAGAAACGAACT+TGG | + | chr5.4:10852612-10852631 | None:intergenic | 40.0% | |
| AAGCGATGGATCAGATTTAC+CGG | + | chr5.4:10852942-10852961 | None:intergenic | 40.0% | |
| ACAATCAGACCAAGCTCTAT+TGG | - | chr5.4:10853105-10853124 | MS.gene010390:CDS | 40.0% | |
| ACTGCCAAGTTCGTTTCTAA+GGG | - | chr5.4:10852605-10852624 | MS.gene010390:intron | 40.0% | |
| AGAAGTGAAGAATCAAGCGA+TGG | + | chr5.4:10852956-10852975 | None:intergenic | 40.0% | |
| ATATACTTACTCTAGCAGCC+AGG | - | chr5.4:10852293-10852312 | MS.gene010390:intron | 40.0% | |
| CAATCAGACCAAGCTCTATT+GGG | - | chr5.4:10853106-10853125 | MS.gene010390:CDS | 40.0% | |
| GATGATACGGACACACTAAA+AGG | - | chr5.4:10852163-10852182 | MS.gene010390:CDS | 40.0% | |
| GCAGTTTCCGTTGAGAAAAT+GGG | - | chr5.4:10853196-10853215 | MS.gene010390:CDS | 40.0% | |
| TACTAGAAATACAGCATCCC+TGG | + | chr5.4:10852314-10852333 | None:intergenic | 40.0% | |
| TACTGCCAAGTTCGTTTCTA+AGG | - | chr5.4:10852604-10852623 | MS.gene010390:intron | 40.0% | |
| TATACTTACTCTAGCAGCCA+GGG | - | chr5.4:10852294-10852313 | MS.gene010390:intron | 40.0% | |
| TATATCAGCACATGAGACTG+TGG | + | chr5.4:10852278-10852297 | None:intergenic | 40.0% | |
| TATTGTCACCCAATAGAGCT+TGG | + | chr5.4:10853117-10853136 | None:intergenic | 40.0% | |
| TCAAATGTGTTCGTAGTGAC+AGG | + | chr5.4:10853043-10853062 | None:intergenic | 40.0% | |
| TGATACGGACACACTAAAAG+GGG | - | chr5.4:10852165-10852184 | MS.gene010390:CDS | 40.0% | |
| TGCAGTTTCCGTTGAGAAAA+TGG | - | chr5.4:10853195-10853214 | MS.gene010390:CDS | 40.0% | |
| TGTGTTACATAGGGATGTGA+TGG | - | chr5.4:10852127-10852146 | MS.gene010390:CDS | 40.0% | |
| ! | AATGCGACCCATTTTCTCAA+CGG | + | chr5.4:10853206-10853225 | None:intergenic | 40.0% |
| ! | ATCTGTGCTACTGGATGATA+CGG | - | chr5.4:10852150-10852169 | MS.gene010390:CDS | 40.0% |
| ! | TATAGTTGAGAGCACACAAG+TGG | + | chr5.4:10851877-10851896 | None:intergenic | 40.0% |
| ! | TTCAGAGTAAAGGGCCATTT+TGG | - | chr5.4:10852492-10852511 | MS.gene010390:CDS | 40.0% |
| !! | TCAGAGTAAAGGGCCATTTT+GGG | - | chr5.4:10852493-10852512 | MS.gene010390:CDS | 40.0% |
| AAGCCAAGGCTATTCGACTT+TGG | - | chr5.4:10852911-10852930 | MS.gene010390:CDS | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.4:10851971-10851990 | None:intergenic | 45.0% | |
| ATACAGGTGCACACACCTTT+GGG | - | chr5.4:10852867-10852886 | MS.gene010390:CDS | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.4:10851959-10851978 | MS.gene010390:CDS | 45.0% | |
| GAGTCGGAATCAGCTTGATT+TGG | + | chr5.4:10853001-10853020 | None:intergenic | 45.0% | |
| GTTGAGAAAATGGGTCGCAT+TGG | - | chr5.4:10853205-10853224 | MS.gene010390:CDS | 45.0% | |
| TATACAGGTGCACACACCTT+TGG | - | chr5.4:10852866-10852885 | MS.gene010390:CDS | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+GGG | + | chr5.4:10852578-10852597 | None:intergenic | 45.0% | |
| TTCGTAGTGACAGGATCCAA+CGG | + | chr5.4:10853034-10853053 | None:intergenic | 45.0% | |
| ! | AGCTGATTCCGACTCCAATT+TGG | - | chr5.4:10853006-10853025 | MS.gene010390:intron | 45.0% |
| ! | TTCTAGAGGTTCAAAGGGTG+AGG | + | chr5.4:10852579-10852598 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.4:10852141-10852160 | MS.gene010390:CDS | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.4:10852638-10852657 | MS.gene010390:intron | 50.0% | |
| AGGATCCAACGGAGCCAAAT+TGG | + | chr5.4:10853023-10853042 | None:intergenic | 50.0% | |
| CAACGGAGCCAAATTGGAGT+CGG | + | chr5.4:10853017-10853036 | None:intergenic | 50.0% | |
| CCAAGGCTATTCGACTTTGG+TGG | - | chr5.4:10852914-10852933 | MS.gene010390:CDS | 50.0% | |
| CCACCAAAGTCGAATAGCCT+TGG | + | chr5.4:10852917-10852936 | None:intergenic | 50.0% | |
| CGGGACAACAGGGTCAAATA+AGG | - | chr5.4:10853236-10853255 | MS.gene010390:CDS | 50.0% | |
| GTACCTCTTGGTCGTAGAGA+TGG | - | chr5.4:10852518-10852537 | MS.gene010390:CDS | 50.0% | |
| TCAGCACATGAGACTGTGGA+TGG | + | chr5.4:10852274-10852293 | None:intergenic | 50.0% | |
| ! | CCAAGAGGTACAGCCCAAAA+TGG | + | chr5.4:10852509-10852528 | None:intergenic | 50.0% |
| ! | CCATTTTGGGCTGTACCTCT+TGG | - | chr5.4:10852506-10852525 | MS.gene010390:CDS | 50.0% |
| ! | CTATTCGACTTTGGTGGCTC+CGG | - | chr5.4:10852920-10852939 | MS.gene010390:CDS | 50.0% |
| !! | AAAGCATTGCGCGAACCCAA+AGG | + | chr5.4:10852885-10852904 | None:intergenic | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.4:10852549-10852568 | None:intergenic | 55.0% | |
| GGTGTTCTTGCGGGACAACA+GGG | - | chr5.4:10853226-10853245 | MS.gene010390:CDS | 55.0% | |
| GTGCCATCTCTACGACCAAG+AGG | + | chr5.4:10852524-10852543 | None:intergenic | 55.0% | |
| TGGTGTTCTTGCGGGACAAC+AGG | - | chr5.4:10853225-10853244 | MS.gene010390:CDS | 55.0% | |
| ! | CGACTCCAATTTGGCTCCGT+TGG | - | chr5.4:10853015-10853034 | MS.gene010390:intron | 55.0% |
| ! | GGGTCGCATTGGTGTTCTTG+CGG | - | chr5.4:10853216-10853235 | MS.gene010390:CDS | 55.0% |
| ! | GGTCGCATTGGTGTTCTTGC+GGG | - | chr5.4:10853217-10853236 | MS.gene010390:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 10851814 | 10853282 | 10851814 | ID=MS.gene010390 |
| chr5.4 | mRNA | 10851814 | 10853282 | 10851814 | ID=MS.gene010390.t1;Parent=MS.gene010390 |
| chr5.4 | exon | 10853067 | 10853282 | 10853067 | ID=MS.gene010390.t1.exon1;Parent=MS.gene010390.t1 |
| chr5.4 | CDS | 10853067 | 10853282 | 10853067 | ID=cds.MS.gene010390.t1;Parent=MS.gene010390.t1 |
| chr5.4 | exon | 10852766 | 10852957 | 10852766 | ID=MS.gene010390.t1.exon2;Parent=MS.gene010390.t1 |
| chr5.4 | CDS | 10852766 | 10852957 | 10852766 | ID=cds.MS.gene010390.t1;Parent=MS.gene010390.t1 |
| chr5.4 | exon | 10852437 | 10852599 | 10852437 | ID=MS.gene010390.t1.exon3;Parent=MS.gene010390.t1 |
| chr5.4 | CDS | 10852437 | 10852599 | 10852437 | ID=cds.MS.gene010390.t1;Parent=MS.gene010390.t1 |
| chr5.4 | exon | 10851814 | 10852223 | 10851814 | ID=MS.gene010390.t1.exon4;Parent=MS.gene010390.t1 |
| chr5.4 | CDS | 10851814 | 10852223 | 10851814 | ID=cds.MS.gene010390.t1;Parent=MS.gene010390.t1 |
| Gene Sequence |
| Protein sequence |
