Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010392.t1 | XP_003611789.1 | 95.7 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 6.40E-178 | 633.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010392.t1 | Q9FX85 | 63.2 | 299 | 107 | 2 | 27 | 322 | 48 | 346 | 1.1e-101 | 371.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010392.t1 | G7K822 | 95.7 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 4.6e-178 | 633.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012254 | MS.gene010392 | PPI |
| MS.gene051844 | MS.gene010392 | PPI |
| MS.gene40613 | MS.gene010392 | PPI |
| MS.gene051232 | MS.gene010392 | PPI |
| MS.gene018002 | MS.gene010392 | PPI |
| MS.gene034512 | MS.gene010392 | PPI |
| MS.gene010392 | MS.gene85778 | PPI |
| MS.gene010392 | MS.gene012253 | PPI |
| MS.gene010392 | MS.gene026111 | PPI |
| MS.gene52672 | MS.gene010392 | PPI |
| MS.gene04636 | MS.gene010392 | PPI |
| MS.gene24862 | MS.gene010392 | PPI |
| MS.gene37256 | MS.gene010392 | PPI |
| MS.gene055984 | MS.gene010392 | PPI |
| MS.gene025145 | MS.gene010392 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010392.t1 | MTR_5g017860 | 95.706 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 0.0 | 642 |
| MS.gene010392.t1 | MTR_5g017850 | 93.252 | 326 | 22 | 0 | 1 | 326 | 1 | 326 | 0.0 | 630 |
| MS.gene010392.t1 | MTR_1g054205 | 51.070 | 327 | 154 | 5 | 4 | 326 | 2 | 326 | 2.42e-107 | 316 |
| MS.gene010392.t1 | MTR_3g094650 | 52.025 | 321 | 142 | 4 | 11 | 326 | 9 | 322 | 3.74e-107 | 315 |
| MS.gene010392.t1 | MTR_4g125940 | 52.012 | 323 | 144 | 5 | 9 | 326 | 13 | 329 | 3.87e-107 | 316 |
| MS.gene010392.t1 | MTR_7g093370 | 50.920 | 326 | 155 | 4 | 5 | 326 | 47 | 371 | 1.21e-106 | 316 |
| MS.gene010392.t1 | MTR_2g084080 | 51.097 | 319 | 147 | 3 | 9 | 326 | 7 | 317 | 2.10e-105 | 311 |
| MS.gene010392.t1 | MTR_5g074970 | 49.538 | 325 | 153 | 3 | 6 | 326 | 9 | 326 | 9.69e-105 | 310 |
| MS.gene010392.t1 | MTR_7g072480 | 50.000 | 322 | 149 | 4 | 6 | 326 | 6 | 316 | 1.49e-104 | 309 |
| MS.gene010392.t1 | MTR_2g084110 | 51.746 | 315 | 140 | 4 | 16 | 326 | 11 | 317 | 1.74e-104 | 308 |
| MS.gene010392.t1 | MTR_2g084010 | 52.848 | 316 | 136 | 5 | 16 | 326 | 11 | 318 | 1.25e-103 | 306 |
| MS.gene010392.t1 | MTR_2g029815 | 51.475 | 305 | 144 | 3 | 25 | 326 | 27 | 330 | 3.25e-103 | 306 |
| MS.gene010392.t1 | MTR_2g084020 | 52.215 | 316 | 138 | 5 | 16 | 326 | 11 | 318 | 4.99e-103 | 305 |
| MS.gene010392.t1 | MTR_4g083710 | 48.182 | 330 | 161 | 5 | 1 | 326 | 1 | 324 | 6.38e-102 | 302 |
| MS.gene010392.t1 | MTR_2g040000 | 51.325 | 302 | 138 | 4 | 31 | 326 | 33 | 331 | 2.74e-101 | 301 |
| MS.gene010392.t1 | MTR_2g029820 | 50.492 | 305 | 147 | 3 | 25 | 326 | 27 | 330 | 6.42e-101 | 301 |
| MS.gene010392.t1 | MTR_5g083860 | 47.866 | 328 | 160 | 4 | 3 | 326 | 5 | 325 | 1.05e-100 | 299 |
| MS.gene010392.t1 | MTR_2g029830 | 50.164 | 305 | 148 | 3 | 25 | 326 | 26 | 329 | 2.32e-100 | 300 |
| MS.gene010392.t1 | MTR_7g072510 | 48.758 | 322 | 153 | 4 | 6 | 326 | 2 | 312 | 4.60e-100 | 297 |
| MS.gene010392.t1 | MTR_2g029560 | 48.466 | 326 | 164 | 3 | 4 | 326 | 1 | 325 | 6.92e-100 | 298 |
| MS.gene010392.t1 | MTR_2g029800 | 50.164 | 305 | 148 | 3 | 25 | 326 | 27 | 330 | 4.27e-99 | 296 |
| MS.gene010392.t1 | MTR_2g084090 | 48.903 | 319 | 152 | 3 | 12 | 326 | 7 | 318 | 5.94e-99 | 295 |
| MS.gene010392.t1 | MTR_2g029730 | 49.843 | 319 | 155 | 4 | 11 | 326 | 10 | 326 | 1.26e-98 | 295 |
| MS.gene010392.t1 | MTR_3g072190 | 48.137 | 322 | 154 | 4 | 10 | 326 | 5 | 318 | 2.08e-98 | 293 |
| MS.gene010392.t1 | MTR_2g084000 | 49.221 | 321 | 149 | 5 | 12 | 326 | 7 | 319 | 2.10e-98 | 293 |
| MS.gene010392.t1 | MTR_3g094670 | 49.226 | 323 | 155 | 3 | 6 | 326 | 7 | 322 | 3.24e-98 | 293 |
| MS.gene010392.t1 | MTR_5g021060 | 51.325 | 302 | 144 | 3 | 27 | 326 | 30 | 330 | 6.78e-98 | 292 |
| MS.gene010392.t1 | MTR_4g074995 | 48.113 | 318 | 144 | 5 | 12 | 326 | 9 | 308 | 2.99e-97 | 290 |
| MS.gene010392.t1 | MTR_3g466200 | 46.296 | 324 | 164 | 3 | 6 | 326 | 4 | 320 | 8.12e-97 | 289 |
| MS.gene010392.t1 | MTR_4g029170 | 46.201 | 329 | 163 | 5 | 4 | 326 | 1 | 321 | 3.34e-96 | 288 |
| MS.gene010392.t1 | MTR_8g076820 | 49.206 | 315 | 155 | 4 | 14 | 326 | 19 | 330 | 4.22e-96 | 288 |
| MS.gene010392.t1 | MTR_4g029180 | 48.667 | 300 | 143 | 4 | 30 | 326 | 30 | 321 | 5.76e-96 | 287 |
| MS.gene010392.t1 | MTR_2g029910 | 47.869 | 305 | 156 | 2 | 25 | 326 | 28 | 332 | 6.63e-96 | 288 |
| MS.gene010392.t1 | MTR_2g029860 | 47.649 | 319 | 159 | 4 | 15 | 326 | 13 | 330 | 2.10e-95 | 287 |
| MS.gene010392.t1 | MTR_4g125940 | 53.986 | 276 | 119 | 4 | 56 | 326 | 2 | 274 | 2.23e-95 | 284 |
| MS.gene010392.t1 | MTR_2g028980 | 47.112 | 329 | 166 | 5 | 5 | 326 | 3 | 330 | 2.33e-95 | 286 |
| MS.gene010392.t1 | MTR_2g029850 | 49.180 | 305 | 151 | 3 | 25 | 326 | 27 | 330 | 8.91e-95 | 285 |
| MS.gene010392.t1 | MTR_3g094630 | 48.297 | 323 | 158 | 3 | 6 | 326 | 7 | 322 | 4.18e-94 | 282 |
| MS.gene010392.t1 | MTR_1g115900 | 45.312 | 320 | 160 | 5 | 14 | 326 | 10 | 321 | 7.16e-94 | 282 |
| MS.gene010392.t1 | MTR_2g029750 | 49.180 | 305 | 151 | 3 | 25 | 326 | 27 | 330 | 1.50e-93 | 282 |
| MS.gene010392.t1 | MTR_4g029200 | 48.845 | 303 | 146 | 3 | 25 | 326 | 44 | 338 | 4.32e-93 | 280 |
| MS.gene010392.t1 | MTR_4g122640 | 49.342 | 304 | 149 | 4 | 25 | 326 | 36 | 336 | 6.83e-93 | 280 |
| MS.gene010392.t1 | MTR_2g029740 | 47.541 | 305 | 156 | 3 | 25 | 326 | 27 | 330 | 8.67e-92 | 278 |
| MS.gene010392.t1 | MTR_4g074990 | 45.820 | 323 | 151 | 5 | 7 | 326 | 4 | 305 | 3.41e-91 | 274 |
| MS.gene010392.t1 | MTR_4g046713 | 44.164 | 317 | 175 | 2 | 11 | 326 | 11 | 326 | 4.42e-91 | 275 |
| MS.gene010392.t1 | MTR_2g088770 | 44.969 | 318 | 169 | 5 | 11 | 326 | 12 | 325 | 4.52e-91 | 275 |
| MS.gene010392.t1 | MTR_3g466180 | 48.125 | 320 | 157 | 3 | 8 | 326 | 12 | 323 | 1.10e-90 | 274 |
| MS.gene010392.t1 | MTR_1g022970 | 50.836 | 299 | 143 | 3 | 31 | 326 | 50 | 347 | 1.28e-90 | 274 |
| MS.gene010392.t1 | MTR_4g029190 | 47.910 | 311 | 152 | 4 | 19 | 326 | 37 | 340 | 1.30e-90 | 274 |
| MS.gene010392.t1 | MTR_5g074740 | 48.457 | 324 | 150 | 10 | 9 | 326 | 9 | 321 | 4.63e-88 | 267 |
| MS.gene010392.t1 | MTR_5g074760 | 48.148 | 324 | 151 | 10 | 9 | 326 | 9 | 321 | 1.05e-87 | 266 |
| MS.gene010392.t1 | MTR_5g074860 | 46.547 | 333 | 161 | 8 | 1 | 325 | 1 | 324 | 3.67e-87 | 265 |
| MS.gene010392.t1 | MTR_5g074710 | 48.607 | 323 | 149 | 11 | 10 | 326 | 10 | 321 | 9.89e-87 | 263 |
| MS.gene010392.t1 | MTR_5g014100 | 46.602 | 309 | 153 | 5 | 27 | 326 | 26 | 331 | 4.98e-86 | 262 |
| MS.gene010392.t1 | MTR_5g049280 | 44.951 | 307 | 162 | 5 | 26 | 326 | 32 | 337 | 4.32e-85 | 260 |
| MS.gene010392.t1 | MTR_7g026990 | 47.475 | 297 | 146 | 4 | 31 | 326 | 35 | 322 | 6.04e-85 | 259 |
| MS.gene010392.t1 | MTR_1g101830 | 40.184 | 326 | 191 | 3 | 1 | 326 | 1 | 322 | 3.83e-84 | 257 |
| MS.gene010392.t1 | MTR_2g008710 | 44.545 | 330 | 174 | 4 | 1 | 326 | 1 | 325 | 4.11e-84 | 257 |
| MS.gene010392.t1 | MTR_4g030890 | 45.875 | 303 | 159 | 4 | 25 | 326 | 98 | 396 | 7.11e-84 | 259 |
| MS.gene010392.t1 | MTR_7g107520 | 45.597 | 318 | 163 | 7 | 11 | 326 | 11 | 320 | 8.26e-83 | 253 |
| MS.gene010392.t1 | MTR_2g029830 | 50.195 | 257 | 124 | 3 | 73 | 326 | 6 | 261 | 8.10e-82 | 250 |
| MS.gene010392.t1 | MTR_4g133800 | 42.905 | 296 | 160 | 4 | 32 | 326 | 46 | 333 | 5.46e-81 | 249 |
| MS.gene010392.t1 | MTR_3g092990 | 41.956 | 317 | 183 | 1 | 11 | 326 | 10 | 326 | 9.12e-81 | 248 |
| MS.gene010392.t1 | MTR_4g074980 | 44.410 | 322 | 146 | 8 | 7 | 326 | 4 | 294 | 2.59e-80 | 246 |
| MS.gene010392.t1 | MTR_0155s0040 | 42.384 | 302 | 163 | 4 | 25 | 326 | 25 | 315 | 4.94e-80 | 246 |
| MS.gene010392.t1 | MTR_4g031140 | 41.379 | 319 | 182 | 4 | 9 | 326 | 10 | 324 | 8.30e-80 | 246 |
| MS.gene010392.t1 | MTR_1g077000 | 39.697 | 330 | 180 | 5 | 5 | 326 | 9 | 327 | 8.78e-80 | 246 |
| MS.gene010392.t1 | MTR_5g022870 | 42.500 | 320 | 176 | 5 | 9 | 326 | 3 | 316 | 1.46e-79 | 245 |
| MS.gene010392.t1 | MTR_4g114210 | 42.767 | 318 | 172 | 4 | 14 | 326 | 8 | 320 | 3.76e-79 | 244 |
| MS.gene010392.t1 | MTR_8g075100 | 43.046 | 302 | 162 | 5 | 27 | 326 | 26 | 319 | 7.21e-79 | 243 |
| MS.gene010392.t1 | MTR_2g437770 | 42.857 | 301 | 162 | 4 | 27 | 326 | 50 | 341 | 7.72e-79 | 244 |
| MS.gene010392.t1 | MTR_1g025980 | 43.533 | 317 | 173 | 4 | 9 | 325 | 7 | 317 | 1.85e-78 | 242 |
| MS.gene010392.t1 | MTR_4g074980 | 48.438 | 256 | 122 | 5 | 7 | 258 | 4 | 253 | 4.30e-78 | 239 |
| MS.gene010392.t1 | MTR_6g027440 | 41.824 | 318 | 179 | 5 | 9 | 326 | 3 | 314 | 8.70e-78 | 241 |
| MS.gene010392.t1 | MTR_3g072190 | 48.837 | 258 | 123 | 3 | 70 | 326 | 2 | 251 | 1.47e-77 | 238 |
| MS.gene010392.t1 | MTR_6g043280 | 43.042 | 309 | 162 | 5 | 21 | 326 | 35 | 332 | 9.83e-77 | 238 |
| MS.gene010392.t1 | MTR_3g467600 | 44.172 | 326 | 168 | 7 | 7 | 326 | 7 | 324 | 2.61e-76 | 237 |
| MS.gene010392.t1 | MTR_7g086820 | 41.830 | 306 | 171 | 4 | 21 | 326 | 14 | 312 | 1.59e-75 | 234 |
| MS.gene010392.t1 | MTR_1g009750 | 40.187 | 321 | 186 | 4 | 10 | 326 | 10 | 328 | 3.70e-75 | 234 |
| MS.gene010392.t1 | MTR_1g086320 | 39.759 | 332 | 192 | 4 | 1 | 326 | 4 | 333 | 2.58e-74 | 232 |
| MS.gene010392.t1 | MTR_6g043240 | 42.857 | 308 | 162 | 5 | 21 | 326 | 36 | 331 | 1.66e-72 | 228 |
| MS.gene010392.t1 | MTR_1g090760 | 39.628 | 323 | 188 | 6 | 10 | 326 | 9 | 330 | 4.45e-72 | 226 |
| MS.gene010392.t1 | MTR_1g038680 | 42.105 | 304 | 164 | 5 | 31 | 326 | 33 | 332 | 4.58e-72 | 226 |
| MS.gene010392.t1 | MTR_1g086490 | 38.757 | 338 | 194 | 4 | 1 | 326 | 4 | 340 | 1.82e-71 | 225 |
| MS.gene010392.t1 | MTR_2g008160 | 41.042 | 307 | 171 | 5 | 25 | 326 | 22 | 323 | 4.25e-71 | 224 |
| MS.gene010392.t1 | MTR_7g029030 | 40.196 | 306 | 169 | 5 | 26 | 326 | 24 | 320 | 6.68e-71 | 223 |
| MS.gene010392.t1 | MTR_4g087965 | 37.647 | 340 | 191 | 6 | 4 | 322 | 3 | 342 | 2.33e-69 | 220 |
| MS.gene010392.t1 | MTR_3g092990 | 39.748 | 317 | 179 | 2 | 11 | 326 | 10 | 315 | 4.86e-69 | 218 |
| MS.gene010392.t1 | MTR_7g086870 | 40.667 | 300 | 168 | 4 | 27 | 326 | 22 | 311 | 2.04e-68 | 216 |
| MS.gene010392.t1 | MTR_5g074860 | 42.515 | 334 | 134 | 10 | 1 | 325 | 1 | 285 | 2.04e-68 | 215 |
| MS.gene010392.t1 | MTR_6g043460 | 41.234 | 308 | 170 | 4 | 21 | 326 | 30 | 328 | 5.92e-68 | 216 |
| MS.gene010392.t1 | MTR_2g008730 | 40.785 | 331 | 161 | 6 | 1 | 326 | 1 | 301 | 1.73e-67 | 214 |
| MS.gene010392.t1 | MTR_2g067440 | 38.066 | 331 | 173 | 7 | 25 | 325 | 58 | 386 | 9.18e-67 | 214 |
| MS.gene010392.t1 | MTR_2g099175 | 40.328 | 305 | 174 | 5 | 26 | 326 | 35 | 335 | 1.83e-65 | 209 |
| MS.gene010392.t1 | MTR_4g127670 | 40.391 | 307 | 171 | 7 | 26 | 326 | 23 | 323 | 2.03e-64 | 206 |
| MS.gene010392.t1 | MTR_5g016010 | 36.000 | 325 | 196 | 6 | 11 | 325 | 6 | 328 | 2.12e-64 | 206 |
| MS.gene010392.t1 | MTR_8g062780 | 36.250 | 320 | 200 | 4 | 10 | 326 | 6 | 324 | 1.09e-63 | 205 |
| MS.gene010392.t1 | MTR_2g078610 | 37.273 | 330 | 174 | 6 | 25 | 322 | 74 | 402 | 3.23e-63 | 206 |
| MS.gene010392.t1 | MTR_1g009750 | 36.760 | 321 | 180 | 5 | 10 | 326 | 10 | 311 | 3.60e-63 | 203 |
| MS.gene010392.t1 | MTR_2g077990 | 37.879 | 330 | 172 | 6 | 25 | 322 | 74 | 402 | 4.13e-63 | 206 |
| MS.gene010392.t1 | MTR_3g105790 | 38.957 | 326 | 189 | 6 | 5 | 326 | 3 | 322 | 1.96e-62 | 201 |
| MS.gene010392.t1 | MTR_4g095450 | 38.245 | 319 | 181 | 8 | 10 | 322 | 12 | 320 | 1.22e-60 | 197 |
| MS.gene010392.t1 | MTR_0286s0010 | 35.514 | 321 | 200 | 5 | 10 | 326 | 17 | 334 | 2.96e-59 | 193 |
| MS.gene010392.t1 | MTR_6g008075 | 35.514 | 321 | 200 | 5 | 10 | 326 | 17 | 334 | 2.96e-59 | 193 |
| MS.gene010392.t1 | MTR_5g033470 | 35.783 | 313 | 184 | 6 | 25 | 326 | 71 | 377 | 6.37e-58 | 191 |
| MS.gene010392.t1 | MTR_2g078280 | 37.188 | 320 | 168 | 6 | 25 | 312 | 74 | 392 | 1.84e-57 | 191 |
| MS.gene010392.t1 | MTR_4g132490 | 35.526 | 304 | 189 | 5 | 26 | 326 | 28 | 327 | 3.05e-56 | 186 |
| MS.gene010392.t1 | MTR_2g008160 | 36.482 | 307 | 150 | 5 | 25 | 326 | 22 | 288 | 2.92e-55 | 182 |
| MS.gene010392.t1 | MTR_0147s0010 | 34.169 | 319 | 176 | 5 | 27 | 325 | 77 | 381 | 1.52e-53 | 180 |
| MS.gene010392.t1 | MTR_2g067450 | 36.570 | 309 | 180 | 8 | 25 | 325 | 9 | 309 | 9.87e-53 | 176 |
| MS.gene010392.t1 | MTR_1g066710 | 32.459 | 305 | 197 | 4 | 25 | 326 | 25 | 323 | 5.84e-48 | 164 |
| MS.gene010392.t1 | MTR_2g008160 | 46.707 | 167 | 86 | 2 | 25 | 191 | 22 | 185 | 2.95e-47 | 158 |
| MS.gene010392.t1 | MTR_7g072490 | 42.128 | 235 | 73 | 3 | 73 | 306 | 2 | 174 | 5.26e-47 | 158 |
| MS.gene010392.t1 | MTR_4g132110 | 32.895 | 304 | 193 | 5 | 27 | 326 | 32 | 328 | 4.73e-46 | 159 |
| MS.gene010392.t1 | MTR_1g066380 | 32.131 | 305 | 198 | 4 | 25 | 326 | 25 | 323 | 8.94e-46 | 158 |
| MS.gene010392.t1 | MTR_1g066640 | 33.117 | 308 | 191 | 5 | 25 | 326 | 25 | 323 | 1.82e-45 | 157 |
| MS.gene010392.t1 | MTR_5g074700 | 42.424 | 231 | 108 | 8 | 100 | 326 | 5 | 214 | 2.87e-45 | 154 |
| MS.gene010392.t1 | MTR_4g132110 | 32.686 | 309 | 192 | 6 | 27 | 326 | 32 | 333 | 1.20e-44 | 155 |
| MS.gene010392.t1 | MTR_1g066680 | 33.333 | 309 | 188 | 6 | 25 | 326 | 25 | 322 | 4.73e-44 | 154 |
| MS.gene010392.t1 | MTR_3g072260 | 57.522 | 113 | 48 | 0 | 26 | 138 | 25 | 137 | 5.57e-41 | 140 |
| MS.gene010392.t1 | MTR_3g105790 | 41.772 | 237 | 132 | 5 | 94 | 326 | 12 | 246 | 6.30e-41 | 143 |
| MS.gene010392.t1 | MTR_3g072210 | 42.408 | 191 | 99 | 5 | 139 | 326 | 56 | 238 | 2.50e-38 | 136 |
| MS.gene010392.t1 | MTR_2g029880 | 39.086 | 197 | 106 | 4 | 133 | 326 | 3 | 188 | 6.08e-36 | 129 |
| MS.gene010392.t1 | MTR_1g066380 | 31.274 | 259 | 169 | 4 | 71 | 326 | 3 | 255 | 6.85e-34 | 125 |
| MS.gene010392.t1 | MTR_2g077980 | 33.333 | 279 | 141 | 10 | 89 | 326 | 11 | 285 | 1.39e-30 | 117 |
| MS.gene010392.t1 | MTR_2g078560 | 31.163 | 215 | 117 | 4 | 139 | 322 | 102 | 316 | 4.59e-25 | 103 |
| MS.gene010392.t1 | MTR_7g086790 | 33.333 | 189 | 104 | 5 | 74 | 262 | 17 | 183 | 1.14e-22 | 94.0 |
| MS.gene010392.t1 | MTR_5g058120 | 35.758 | 165 | 92 | 4 | 161 | 324 | 6 | 157 | 3.49e-22 | 94.0 |
| MS.gene010392.t1 | MTR_4g114220 | 54.545 | 88 | 30 | 2 | 47 | 134 | 23 | 100 | 7.15e-21 | 87.4 |
| MS.gene010392.t1 | MTR_6g048160 | 62.319 | 69 | 22 | 2 | 66 | 134 | 22 | 86 | 5.20e-20 | 83.6 |
| MS.gene010392.t1 | MTR_1g089005 | 42.520 | 127 | 63 | 3 | 16 | 133 | 1 | 126 | 5.42e-20 | 85.5 |
| MS.gene010392.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 190 | 326 | 9 | 149 | 1.75e-18 | 81.3 |
| MS.gene010392.t1 | MTR_5g074770 | 47.253 | 91 | 45 | 2 | 237 | 325 | 19 | 108 | 2.96e-16 | 73.9 |
| MS.gene010392.t1 | MTR_7g107500 | 43.434 | 99 | 54 | 2 | 228 | 326 | 1 | 97 | 3.59e-16 | 73.2 |
| MS.gene010392.t1 | MTR_2g029930 | 43.434 | 99 | 28 | 3 | 25 | 109 | 17 | 101 | 4.71e-16 | 73.2 |
| MS.gene010392.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 88 | 260 | 3 | 131 | 2.59e-14 | 69.3 |
| MS.gene010392.t1 | MTR_1g098320 | 36.842 | 95 | 59 | 1 | 233 | 326 | 30 | 124 | 3.77e-14 | 68.9 |
| MS.gene010392.t1 | MTR_7g086810 | 33.333 | 114 | 50 | 1 | 27 | 140 | 6 | 93 | 1.02e-12 | 67.0 |
| MS.gene010392.t1 | MTR_4g012865 | 38.235 | 68 | 42 | 0 | 27 | 94 | 77 | 144 | 1.68e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010392.t1 | AT1G49570 | 62.706 | 303 | 110 | 2 | 23 | 322 | 44 | 346 | 2.10e-130 | 376 |
| MS.gene010392.t1 | AT5G19890 | 53.517 | 327 | 142 | 4 | 4 | 326 | 7 | 327 | 2.01e-114 | 334 |
| MS.gene010392.t1 | AT5G06730 | 54.754 | 305 | 134 | 3 | 25 | 326 | 31 | 334 | 7.04e-113 | 332 |
| MS.gene010392.t1 | AT5G06720 | 52.131 | 305 | 142 | 3 | 25 | 326 | 30 | 333 | 2.05e-105 | 311 |
| MS.gene010392.t1 | AT4G36430 | 48.515 | 303 | 153 | 3 | 26 | 326 | 29 | 330 | 2.25e-100 | 299 |
| MS.gene010392.t1 | AT2G18150 | 45.758 | 330 | 165 | 4 | 10 | 326 | 8 | 336 | 2.92e-99 | 296 |
| MS.gene010392.t1 | AT2G38390 | 49.367 | 316 | 155 | 4 | 15 | 326 | 19 | 333 | 3.27e-99 | 296 |
| MS.gene010392.t1 | AT5G05340 | 47.231 | 307 | 153 | 3 | 22 | 326 | 25 | 324 | 2.11e-97 | 291 |
| MS.gene010392.t1 | AT2G18140 | 48.013 | 302 | 154 | 3 | 27 | 326 | 35 | 335 | 1.83e-95 | 286 |
| MS.gene010392.t1 | AT1G44970 | 50.820 | 305 | 146 | 3 | 25 | 326 | 43 | 346 | 7.15e-95 | 285 |
| MS.gene010392.t1 | AT2G38380 | 48.125 | 320 | 161 | 4 | 11 | 326 | 15 | 333 | 2.54e-93 | 281 |
| MS.gene010392.t1 | AT1G14550 | 45.483 | 321 | 164 | 5 | 10 | 326 | 8 | 321 | 2.81e-93 | 280 |
| MS.gene010392.t1 | AT5G19880 | 47.401 | 327 | 165 | 5 | 6 | 326 | 4 | 329 | 4.13e-93 | 280 |
| MS.gene010392.t1 | AT3G32980 | 46.037 | 328 | 171 | 4 | 4 | 326 | 8 | 334 | 1.99e-92 | 279 |
| MS.gene010392.t1 | AT1G14540 | 46.519 | 316 | 157 | 5 | 16 | 326 | 7 | 315 | 2.28e-91 | 275 |
| MS.gene010392.t1 | AT3G49120 | 45.820 | 323 | 169 | 4 | 9 | 326 | 14 | 335 | 2.75e-91 | 276 |
| MS.gene010392.t1 | AT3G50990 | 46.440 | 323 | 167 | 4 | 9 | 326 | 20 | 341 | 1.55e-90 | 274 |
| MS.gene010392.t1 | AT5G15180 | 46.372 | 317 | 163 | 6 | 13 | 326 | 17 | 329 | 1.49e-89 | 271 |
| MS.gene010392.t1 | AT5G58400 | 44.578 | 332 | 171 | 4 | 1 | 326 | 1 | 325 | 1.90e-89 | 271 |
| MS.gene010392.t1 | AT3G49110 | 46.012 | 326 | 164 | 5 | 9 | 326 | 15 | 336 | 2.46e-89 | 271 |
| MS.gene010392.t1 | AT4G08780 | 47.419 | 310 | 151 | 5 | 25 | 326 | 22 | 327 | 3.26e-89 | 271 |
| MS.gene010392.t1 | AT3G01190 | 46.605 | 324 | 166 | 6 | 5 | 326 | 3 | 321 | 9.22e-89 | 269 |
| MS.gene010392.t1 | AT4G16270 | 48.013 | 302 | 152 | 4 | 27 | 326 | 50 | 348 | 2.53e-88 | 268 |
| MS.gene010392.t1 | AT1G68850 | 43.963 | 323 | 173 | 6 | 11 | 326 | 14 | 335 | 3.80e-88 | 268 |
| MS.gene010392.t1 | AT5G58390 | 46.395 | 319 | 161 | 3 | 11 | 326 | 5 | 316 | 3.93e-88 | 267 |
| MS.gene010392.t1 | AT4G08770 | 47.604 | 313 | 152 | 5 | 22 | 326 | 19 | 327 | 8.45e-88 | 267 |
| MS.gene010392.t1 | AT3G03670 | 44.860 | 321 | 168 | 5 | 10 | 326 | 6 | 321 | 1.36e-87 | 266 |
| MS.gene010392.t1 | AT5G66390 | 43.807 | 331 | 175 | 5 | 6 | 326 | 4 | 333 | 2.57e-87 | 266 |
| MS.gene010392.t1 | AT1G05260 | 43.465 | 329 | 179 | 7 | 1 | 326 | 1 | 325 | 2.43e-86 | 263 |
| MS.gene010392.t1 | AT2G35380 | 43.402 | 341 | 167 | 6 | 4 | 326 | 3 | 335 | 3.44e-84 | 258 |
| MS.gene010392.t1 | AT5G51890 | 40.566 | 318 | 186 | 2 | 9 | 326 | 8 | 322 | 2.89e-83 | 254 |
| MS.gene010392.t1 | AT3G21770 | 44.333 | 300 | 163 | 4 | 25 | 322 | 27 | 324 | 3.51e-83 | 255 |
| MS.gene010392.t1 | AT4G11290 | 43.421 | 304 | 170 | 2 | 25 | 326 | 23 | 326 | 1.59e-82 | 253 |
| MS.gene010392.t1 | AT2G22420 | 43.302 | 321 | 173 | 5 | 8 | 326 | 6 | 319 | 5.16e-82 | 252 |
| MS.gene010392.t1 | AT5G17820 | 41.640 | 317 | 175 | 4 | 10 | 326 | 7 | 313 | 8.43e-82 | 251 |
| MS.gene010392.t1 | AT5G64120 | 42.154 | 325 | 175 | 5 | 9 | 326 | 10 | 328 | 5.03e-81 | 249 |
| MS.gene010392.t1 | AT5G17820 | 41.640 | 317 | 175 | 4 | 10 | 326 | 60 | 366 | 1.65e-80 | 249 |
| MS.gene010392.t1 | AT1G05240 | 43.333 | 300 | 162 | 6 | 27 | 322 | 26 | 321 | 1.33e-78 | 243 |
| MS.gene010392.t1 | AT1G05250 | 43.333 | 300 | 162 | 6 | 27 | 322 | 26 | 321 | 1.33e-78 | 243 |
| MS.gene010392.t1 | AT5G42180 | 41.195 | 318 | 182 | 3 | 8 | 325 | 4 | 316 | 1.59e-77 | 240 |
| MS.gene010392.t1 | AT4G33420 | 41.830 | 306 | 167 | 4 | 21 | 326 | 31 | 325 | 2.84e-77 | 239 |
| MS.gene010392.t1 | AT4G33420 | 41.830 | 306 | 167 | 4 | 21 | 326 | 78 | 372 | 1.65e-76 | 239 |
| MS.gene010392.t1 | AT2G41480 | 42.154 | 325 | 176 | 7 | 8 | 326 | 10 | 328 | 2.30e-76 | 237 |
| MS.gene010392.t1 | AT4G25980 | 40.391 | 307 | 174 | 4 | 25 | 326 | 24 | 326 | 2.22e-74 | 232 |
| MS.gene010392.t1 | AT5G39580 | 42.006 | 319 | 175 | 6 | 9 | 326 | 10 | 319 | 2.60e-73 | 229 |
| MS.gene010392.t1 | AT4G26010 | 40.881 | 318 | 168 | 7 | 12 | 326 | 9 | 309 | 3.33e-73 | 229 |
| MS.gene010392.t1 | AT1G30870 | 42.244 | 303 | 164 | 5 | 27 | 326 | 51 | 345 | 3.33e-73 | 230 |
| MS.gene010392.t1 | AT4G33870 | 37.538 | 333 | 172 | 4 | 25 | 322 | 66 | 397 | 4.61e-73 | 231 |
| MS.gene010392.t1 | AT4G26010 | 40.881 | 318 | 168 | 7 | 12 | 326 | 37 | 337 | 6.67e-73 | 229 |
| MS.gene010392.t1 | AT3G49960 | 39.877 | 326 | 185 | 7 | 9 | 326 | 7 | 329 | 3.38e-71 | 224 |
| MS.gene010392.t1 | AT2G39040 | 42.532 | 308 | 168 | 7 | 26 | 326 | 45 | 350 | 3.91e-71 | 224 |
| MS.gene010392.t1 | AT2G18980 | 39.752 | 322 | 181 | 7 | 11 | 326 | 9 | 323 | 5.47e-71 | 223 |
| MS.gene010392.t1 | AT4G37530 | 41.424 | 309 | 176 | 4 | 22 | 326 | 22 | 329 | 1.19e-70 | 223 |
| MS.gene010392.t1 | AT1G71695 | 39.610 | 308 | 174 | 5 | 23 | 326 | 40 | 339 | 2.79e-70 | 223 |
| MS.gene010392.t1 | AT2G24800 | 43.322 | 307 | 163 | 5 | 25 | 326 | 29 | 329 | 4.91e-70 | 221 |
| MS.gene010392.t1 | AT5G67400 | 40.065 | 307 | 177 | 5 | 25 | 326 | 25 | 329 | 5.45e-69 | 218 |
| MS.gene010392.t1 | AT1G77100 | 39.264 | 326 | 180 | 8 | 9 | 326 | 4 | 319 | 1.53e-68 | 217 |
| MS.gene010392.t1 | AT5G64100 | 40.397 | 302 | 169 | 5 | 28 | 326 | 38 | 331 | 4.58e-68 | 216 |
| MS.gene010392.t1 | AT5G47000 | 36.533 | 323 | 194 | 5 | 10 | 326 | 13 | 330 | 1.33e-67 | 215 |
| MS.gene010392.t1 | AT3G28200 | 38.961 | 308 | 172 | 4 | 25 | 326 | 19 | 316 | 1.34e-67 | 214 |
| MS.gene010392.t1 | AT5G24070 | 40.064 | 312 | 178 | 5 | 19 | 326 | 29 | 335 | 1.34e-67 | 215 |
| MS.gene010392.t1 | AT4G17690 | 39.274 | 303 | 175 | 4 | 27 | 326 | 26 | 322 | 4.99e-67 | 213 |
| MS.gene010392.t1 | AT5G64110 | 40.803 | 299 | 168 | 6 | 31 | 326 | 38 | 330 | 7.17e-67 | 213 |
| MS.gene010392.t1 | AT4G31760 | 40.248 | 323 | 179 | 7 | 11 | 326 | 11 | 326 | 7.51e-67 | 213 |
| MS.gene010392.t1 | AT4G37520 | 38.907 | 311 | 175 | 5 | 25 | 326 | 25 | 329 | 1.21e-66 | 212 |
| MS.gene010392.t1 | AT2G34060 | 36.795 | 337 | 195 | 6 | 4 | 323 | 8 | 343 | 4.30e-66 | 211 |
| MS.gene010392.t1 | AT5G14130 | 40.065 | 307 | 173 | 6 | 25 | 326 | 30 | 330 | 6.46e-66 | 211 |
| MS.gene010392.t1 | AT4G30170 | 38.387 | 310 | 178 | 7 | 23 | 326 | 23 | 325 | 9.91e-66 | 210 |
| MS.gene010392.t1 | AT5G14130 | 38.602 | 329 | 188 | 7 | 6 | 326 | 49 | 371 | 2.38e-65 | 210 |
| MS.gene010392.t1 | AT2G43480 | 39.934 | 303 | 172 | 6 | 28 | 326 | 39 | 335 | 1.02e-64 | 207 |
| MS.gene010392.t1 | AT4G37520 | 38.585 | 311 | 173 | 6 | 25 | 326 | 25 | 326 | 1.43e-64 | 207 |
| MS.gene010392.t1 | AT1G34510 | 38.050 | 318 | 181 | 7 | 10 | 326 | 7 | 309 | 4.95e-63 | 202 |
| MS.gene010392.t1 | AT5G40150 | 37.013 | 308 | 179 | 4 | 25 | 326 | 30 | 328 | 1.55e-61 | 199 |
| MS.gene010392.t1 | AT4G37530 | 42.146 | 261 | 146 | 4 | 22 | 278 | 22 | 281 | 1.97e-59 | 192 |
| MS.gene010392.t1 | AT2G35380 | 43.254 | 252 | 121 | 5 | 89 | 326 | 4 | 247 | 2.45e-59 | 191 |
| MS.gene010392.t1 | AT5G22410 | 35.890 | 326 | 197 | 8 | 4 | 324 | 5 | 323 | 2.19e-58 | 191 |
| MS.gene010392.t1 | AT1G24110 | 36.970 | 330 | 182 | 9 | 12 | 326 | 4 | 322 | 2.05e-55 | 183 |
| MS.gene010392.t1 | AT4G21960 | 34.211 | 304 | 189 | 5 | 27 | 326 | 31 | 327 | 5.20e-50 | 169 |
| MS.gene010392.t1 | AT2G37130 | 34.740 | 308 | 185 | 7 | 26 | 326 | 29 | 327 | 1.22e-48 | 166 |
| MS.gene010392.t1 | AT2G37130 | 34.868 | 304 | 182 | 7 | 30 | 326 | 2 | 296 | 1.81e-48 | 164 |
| MS.gene010392.t1 | AT4G25980 | 45.087 | 173 | 92 | 2 | 25 | 197 | 69 | 238 | 7.10e-46 | 157 |
| MS.gene010392.t1 | AT3G17070 | 33.224 | 304 | 197 | 6 | 27 | 326 | 38 | 339 | 4.88e-45 | 157 |
| MS.gene010392.t1 | AT5G39580 | 44.560 | 193 | 100 | 3 | 9 | 201 | 10 | 195 | 1.36e-44 | 152 |
| MS.gene010392.t1 | AT2G24800 | 45.087 | 173 | 88 | 3 | 25 | 195 | 29 | 196 | 2.34e-38 | 136 |
| MS.gene010392.t1 | AT3G17070 | 31.679 | 262 | 172 | 7 | 69 | 326 | 18 | 276 | 1.73e-30 | 117 |
| MS.gene010392.t1 | AT3G42570 | 34.821 | 112 | 60 | 3 | 56 | 165 | 20 | 120 | 6.53e-11 | 60.5 |
Find 48 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGAGTAGAGGGCCATTT+TGG | 0.168625 | 5.4:-10863270 | MS.gene010392:intron |
| TGCAGTTTCTGTTGAGAAAA+TGG | 0.175355 | 5.4:-10862564 | MS.gene010392:CDS |
| CCTCTTAATGAATTCTTATT+AGG | 0.231906 | 5.4:+10863536 | None:intergenic |
| GATGATTCAGACACACTAAA+AGG | 0.290985 | 5.4:-10863575 | MS.gene010392:CDS |
| TTAACTATTCTGTTCAGATT+TGG | 0.299173 | 5.4:+10863846 | None:intergenic |
| CAATCAGACCAAGCTCTATT+AGG | 0.312839 | 5.4:-10862653 | MS.gene010392:CDS |
| CCAAGATGTACAGCCCAAAA+TGG | 0.352063 | 5.4:+10863256 | None:intergenic |
| AGGATCCAATGGAGCCAAAT+TGG | 0.353753 | 5.4:+10862739 | None:intergenic |
| AGCTGTTTCAGACACCAATT+TGG | 0.354861 | 5.4:-10862753 | MS.gene010392:CDS |
| AGACACCAATTTGGCTCCAT+TGG | 0.357634 | 5.4:-10862744 | MS.gene010392:CDS |
| TGATGTTCTTACGGGACAAC+AGG | 0.360814 | 5.4:-10862534 | MS.gene010392:CDS |
| TGACAGCACAACTGCTTCAT+TGG | 0.363732 | 5.4:-10862630 | MS.gene010392:CDS |
| CCTAATAAGAATTCATTAAG+AGG | 0.373805 | 5.4:-10863536 | MS.gene010392:CDS |
| CGGGACAACAGGGTCAAATA+AGG | 0.392480 | 5.4:-10862523 | MS.gene010392:CDS |
| GTGTCTGAAACAGCTTGATT+TGG | 0.395419 | 5.4:+10862761 | None:intergenic |
| TATGCAGGTGCACACACCTT+TGG | 0.410019 | 5.4:-10862893 | MS.gene010392:intron |
| CTATTCGACTTTGGTGGCTC+TGG | 0.414711 | 5.4:-10862839 | MS.gene010392:CDS |
| GGTCGCATTGATGTTCTTAC+GGG | 0.420596 | 5.4:-10862542 | MS.gene010392:CDS |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.4:+10863800 | None:intergenic |
| TCAGCACATGACACTGTGTT+AGG | 0.424517 | 5.4:+10863467 | None:intergenic |
| GGGTCGCATTGATGTTCTTA+CGG | 0.427573 | 5.4:-10862543 | MS.gene010392:CDS |
| TTACATTGACGAAACAATCA+TGG | 0.430670 | 5.4:+10863757 | None:intergenic |
| TACTTGATATACAGCATCTC+TGG | 0.434277 | 5.4:+10863427 | None:intergenic |
| GCAGTTTCTGTTGAGAAAAT+GGG | 0.438276 | 5.4:-10862563 | MS.gene010392:CDS |
| AAGACCTTTGGAAATGAACT+TGG | 0.454907 | 5.4:+10863153 | None:intergenic |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.4:-10863597 | MS.gene010392:CDS |
| CGAAACAATCATGGAAATGA+AGG | 0.464987 | 5.4:+10863766 | None:intergenic |
| TCAAATGTGTTGCTTGTGAC+AGG | 0.470077 | 5.4:+10862719 | None:intergenic |
| AAACCAAGACTATTCGACTT+TGG | 0.476500 | 5.4:-10862848 | MS.gene010392:CDS |
| ATGATTCAGACACACTAAAA+GGG | 0.487747 | 5.4:-10863574 | MS.gene010392:CDS |
| TGCTGTCACCTAATAGAGCT+TGG | 0.491857 | 5.4:+10862645 | None:intergenic |
| TGAACCTCTAGAAAACATTA+CGG | 0.495557 | 5.4:-10863176 | MS.gene010392:CDS |
| GGTGTTACTTAGGGATGTGA+TGG | 0.495687 | 5.4:-10863611 | MS.gene010392:intron |
| CCAAGACTATTCGACTTTGG+TGG | 0.503120 | 5.4:-10862845 | MS.gene010392:CDS |
| CCACCAAAGTCGAATAGTCT+TGG | 0.511471 | 5.4:+10862845 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.4:-10863124 | MS.gene010392:intron |
| TCTAGAGGTTCAAAGGGTGA+TGG | 0.550333 | 5.4:+10863187 | None:intergenic |
| GTACATCTTGGTCGTAGAGA+TGG | 0.571929 | 5.4:-10863244 | MS.gene010392:CDS |
| ACGGCCAAGTTCATTTCCAA+AGG | 0.572086 | 5.4:-10863157 | MS.gene010392:CDS |
| TGGTTAACTATTATAGCAAG+TGG | 0.574333 | 5.4:-10862610 | MS.gene010392:CDS |
| TAGAGTTGAGAGCACACAAG+TGG | 0.587545 | 5.4:+10863894 | None:intergenic |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.4:-10863809 | MS.gene010392:CDS |
| TTGCTTGTGACAGGATCCAA+TGG | 0.612319 | 5.4:+10862728 | None:intergenic |
| TGATTCAGACACACTAAAAG+GGG | 0.629420 | 5.4:-10863573 | MS.gene010392:CDS |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.4:+10863216 | None:intergenic |
| AGAAGTGATGAATCAAGTGA+TGG | 0.657845 | 5.4:+10862806 | None:intergenic |
| GATGTTCTTACGGGACAACA+GGG | 0.658146 | 5.4:-10862533 | MS.gene010392:CDS |
| AAAGCATTGAGCAAAGCCAA+AGG | 0.681054 | 5.4:+10862877 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATAAAATAATTGTGA+AGG | + | chr5.4:10863362-10863381 | None:intergenic | 15.0% |
| !!! | AATTTTAAGTAACAATATGT+TGG | + | chr5.4:10863145-10863164 | None:intergenic | 15.0% |
| !!! | GTTAATTTCTTATTTCATTT+TGG | - | chr5.4:10862821-10862840 | MS.gene010392:CDS | 15.0% |
| !! | AATGAAATATTAAGGATCTA+AGG | + | chr5.4:10863456-10863475 | None:intergenic | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.4:10863943-10863962 | MS.gene010392:CDS | 20.0% |
| !! | TCAGATTCAATGAAATATTA+AGG | + | chr5.4:10863464-10863483 | None:intergenic | 20.0% |
| ! | CCTAATAAGAATTCATTAAG+AGG | - | chr5.4:10862917-10862936 | MS.gene010392:intron | 25.0% |
| ! | CCTCTTAATGAATTCTTATT+AGG | + | chr5.4:10862920-10862939 | None:intergenic | 25.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.4:10863942-10863961 | MS.gene010392:CDS | 25.0% |
| ! | TTAACTATTCTGTTCAGATT+TGG | + | chr5.4:10862610-10862629 | None:intergenic | 25.0% |
| !! | AAATCTCTGAAAAACAGAAT+AGG | + | chr5.4:10863869-10863888 | None:intergenic | 25.0% |
| !!! | AAAAATGTTTTGAGCAATTC+TGG | - | chr5.4:10863770-10863789 | MS.gene010392:CDS | 25.0% |
| !!! | ATTTCATTTTGGTGTTACTT+AGG | - | chr5.4:10862832-10862851 | MS.gene010392:CDS | 25.0% |
| !!! | TTTCATTTTGGTGTTACTTA+GGG | - | chr5.4:10862833-10862852 | MS.gene010392:CDS | 25.0% |
| ATGATTCAGACACACTAAAA+GGG | - | chr5.4:10862879-10862898 | MS.gene010392:CDS | 30.0% | |
| GTTTAAATCCTTAACTCCAA+AGG | - | chr5.4:10863405-10863424 | MS.gene010392:intron | 30.0% | |
| TGGTTAACTATTATAGCAAG+TGG | - | chr5.4:10863843-10863862 | MS.gene010392:CDS | 30.0% | |
| TTACATTGACGAAACAATCA+TGG | + | chr5.4:10862699-10862718 | None:intergenic | 30.0% | |
| TTCCAAAGGTCTTGAAAAAA+AGG | - | chr5.4:10863310-10863329 | MS.gene010392:intron | 30.0% | |
| ! | TGAACCTCTAGAAAACATTA+CGG | - | chr5.4:10863277-10863296 | MS.gene010392:intron | 30.0% |
| ! | TTTTTACATATGAGACCGAA+TGG | - | chr5.4:10863493-10863512 | MS.gene010392:CDS | 30.0% |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.4:10863276-10863295 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.4:10863275-10863294 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTTCAAGACCTT+TGG | + | chr5.4:10863315-10863334 | None:intergenic | 30.0% |
| AAACCAAGACTATTCGACTT+TGG | - | chr5.4:10863605-10863624 | MS.gene010392:intron | 35.0% | |
| AATCCTTAACTCCAAAGGTT+TGG | - | chr5.4:10863410-10863429 | MS.gene010392:intron | 35.0% | |
| AGAAGTGATGAATCAAGTGA+TGG | + | chr5.4:10863650-10863669 | None:intergenic | 35.0% | |
| AGTCAATACACGTGTGAAAT+TGG | + | chr5.4:10863539-10863558 | None:intergenic | 35.0% | |
| CGAAACAATCATGGAAATGA+AGG | + | chr5.4:10862690-10862709 | None:intergenic | 35.0% | |
| GATGATTCAGACACACTAAA+AGG | - | chr5.4:10862878-10862897 | MS.gene010392:CDS | 35.0% | |
| GCAGTTTCTGTTGAGAAAAT+GGG | - | chr5.4:10863890-10863909 | MS.gene010392:CDS | 35.0% | |
| TACTTGATATACAGCATCTC+TGG | + | chr5.4:10863029-10863048 | None:intergenic | 35.0% | |
| TGATTCAGACACACTAAAAG+GGG | - | chr5.4:10862880-10862899 | MS.gene010392:CDS | 35.0% | |
| TGCAGTTTCTGTTGAGAAAA+TGG | - | chr5.4:10863889-10863908 | MS.gene010392:CDS | 35.0% | |
| TTACTACTAGACCAAACCTT+TGG | + | chr5.4:10863424-10863443 | None:intergenic | 35.0% | |
| ! | AAGACCTTTGGAAATGAACT+TGG | + | chr5.4:10863303-10863322 | None:intergenic | 35.0% |
| ! | GGTTTGGTCTAGTAGTAAAA+AGG | - | chr5.4:10863426-10863445 | MS.gene010392:intron | 35.0% |
| !!! | TTTTTTCTTCCCAGAGTAGA+GGG | - | chr5.4:10863174-10863193 | MS.gene010392:CDS | 35.0% |
| !!! | TTTTTTTCTTCCCAGAGTAG+AGG | - | chr5.4:10863173-10863192 | MS.gene010392:CDS | 35.0% |
| CAATCAGACCAAGCTCTATT+AGG | - | chr5.4:10863800-10863819 | MS.gene010392:CDS | 40.0% | |
| CGACTAACTAGTACACCATT+CGG | + | chr5.4:10863511-10863530 | None:intergenic | 40.0% | |
| ! | AGCTGTTTCAGACACCAATT+TGG | - | chr5.4:10863700-10863719 | MS.gene010392:intron | 40.0% |
| ! | GTGTCTGAAACAGCTTGATT+TGG | + | chr5.4:10863695-10863714 | None:intergenic | 40.0% |
| ! | TTGGCCGTAATGTTTTCTAG+AGG | + | chr5.4:10863284-10863303 | None:intergenic | 40.0% |
| !! | AAAGCATTGAGCAAAGCCAA+AGG | + | chr5.4:10863579-10863598 | None:intergenic | 40.0% |
| !! | AGACCAAACCTTTGGAGTTA+AGG | + | chr5.4:10863416-10863435 | None:intergenic | 40.0% |
| !! | CACGTGTATTGACTATATGC+AGG | - | chr5.4:10863545-10863564 | MS.gene010392:CDS | 40.0% |
| !! | TCAAATGTGTTGCTTGTGAC+AGG | + | chr5.4:10863737-10863756 | None:intergenic | 40.0% |
| ACGGCCAAGTTCATTTCCAA+AGG | - | chr5.4:10863296-10863315 | MS.gene010392:intron | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.4:10862656-10862675 | None:intergenic | 45.0% | |
| AGGATCCAATGGAGCCAAAT+TGG | + | chr5.4:10863717-10863736 | None:intergenic | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.4:10862644-10862663 | MS.gene010392:CDS | 45.0% | |
| CCAAGACTATTCGACTTTGG+TGG | - | chr5.4:10863608-10863627 | MS.gene010392:intron | 45.0% | |
| CCAAGATGTACAGCCCAAAA+TGG | + | chr5.4:10863200-10863219 | None:intergenic | 45.0% | |
| CCACCAAAGTCGAATAGTCT+TGG | + | chr5.4:10863611-10863630 | None:intergenic | 45.0% | |
| GATGTTCTTACGGGACAACA+GGG | - | chr5.4:10863920-10863939 | MS.gene010392:CDS | 45.0% | |
| GTACATCTTGGTCGTAGAGA+TGG | - | chr5.4:10863209-10863228 | MS.gene010392:CDS | 45.0% | |
| TCAGCACATGACACTGTGTT+AGG | + | chr5.4:10862989-10863008 | None:intergenic | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+TGG | + | chr5.4:10863269-10863288 | None:intergenic | 45.0% | |
| TGACAGCACAACTGCTTCAT+TGG | - | chr5.4:10863823-10863842 | MS.gene010392:CDS | 45.0% | |
| TGATGTTCTTACGGGACAAC+AGG | - | chr5.4:10863919-10863938 | MS.gene010392:CDS | 45.0% | |
| TGCTGTCACCTAATAGAGCT+TGG | + | chr5.4:10863811-10863830 | None:intergenic | 45.0% | |
| TTGCTTGTGACAGGATCCAA+TGG | + | chr5.4:10863728-10863747 | None:intergenic | 45.0% | |
| ! | AGACACCAATTTGGCTCCAT+TGG | - | chr5.4:10863709-10863728 | MS.gene010392:intron | 45.0% |
| ! | CCATTTTGGGCTGTACATCT+TGG | - | chr5.4:10863197-10863216 | MS.gene010392:CDS | 45.0% |
| ! | GGGTCGCATTGATGTTCTTA+CGG | - | chr5.4:10863910-10863929 | MS.gene010392:CDS | 45.0% |
| ! | GGTCGCATTGATGTTCTTAC+GGG | - | chr5.4:10863911-10863930 | MS.gene010392:CDS | 45.0% |
| ! | TAGAGTTGAGAGCACACAAG+TGG | + | chr5.4:10862562-10862581 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.4:10862856-10862875 | MS.gene010392:CDS | 45.0% |
| !! | GGTGTTACTTAGGGATGTGA+TGG | - | chr5.4:10862842-10862861 | MS.gene010392:CDS | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.4:10863329-10863348 | MS.gene010392:intron | 50.0% | |
| CCAAAATGGCCCTCTACTCT+GGG | + | chr5.4:10863186-10863205 | None:intergenic | 50.0% | |
| CGGGACAACAGGGTCAAATA+AGG | - | chr5.4:10863930-10863949 | MS.gene010392:CDS | 50.0% | |
| TATGCAGGTGCACACACCTT+TGG | - | chr5.4:10863560-10863579 | MS.gene010392:CDS | 50.0% | |
| ! | CTATTCGACTTTGGTGGCTC+TGG | - | chr5.4:10863614-10863633 | MS.gene010392:intron | 50.0% |
| !! | CCAGAGTAGAGGGCCATTTT+GGG | - | chr5.4:10863184-10863203 | MS.gene010392:CDS | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.4:10863240-10863259 | None:intergenic | 55.0% | |
| CCCAAAATGGCCCTCTACTC+TGG | + | chr5.4:10863187-10863206 | None:intergenic | 55.0% | |
| ! | CCCAGAGTAGAGGGCCATTT+TGG | - | chr5.4:10863183-10863202 | MS.gene010392:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 10862499 | 10863976 | 10862499 | ID=MS.gene010392 |
| chr5.4 | mRNA | 10862499 | 10863976 | 10862499 | ID=MS.gene010392.t1;Parent=MS.gene010392 |
| chr5.4 | exon | 10863761 | 10863976 | 10863761 | ID=MS.gene010392.t1.exon1;Parent=MS.gene010392.t1 |
| chr5.4 | CDS | 10863761 | 10863976 | 10863761 | ID=cds.MS.gene010392.t1;Parent=MS.gene010392.t1 |
| chr5.4 | exon | 10863430 | 10863621 | 10863430 | ID=MS.gene010392.t1.exon2;Parent=MS.gene010392.t1 |
| chr5.4 | CDS | 10863430 | 10863621 | 10863430 | ID=cds.MS.gene010392.t1;Parent=MS.gene010392.t1 |
| chr5.4 | exon | 10863125 | 10863287 | 10863125 | ID=MS.gene010392.t1.exon3;Parent=MS.gene010392.t1 |
| chr5.4 | CDS | 10863125 | 10863287 | 10863125 | ID=cds.MS.gene010392.t1;Parent=MS.gene010392.t1 |
| chr5.4 | exon | 10862499 | 10862908 | 10862499 | ID=MS.gene010392.t1.exon4;Parent=MS.gene010392.t1 |
| chr5.4 | CDS | 10862499 | 10862908 | 10862499 | ID=cds.MS.gene010392.t1;Parent=MS.gene010392.t1 |
| Gene Sequence |
| Protein sequence |
