Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013401.t1 | XP_003602457.1 | 97.9 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 2.70E-122 | 448 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013401.t1 | P34091 | 80.2 | 232 | 46 | 0 | 2 | 233 | 3 | 234 | 1.9e-100 | 366.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013401.t1 | G7J9R6 | 97.9 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 2.0e-122 | 448.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013401 | MS.gene70316 | PPI |
| MS.gene013401 | MS.gene036487 | PPI |
| MS.gene013401 | MS.gene81197 | PPI |
| MS.gene013401 | MS.gene035331 | PPI |
| MS.gene013401 | MS.gene010453 | PPI |
| MS.gene013401 | MS.gene06481 | PPI |
| MS.gene013401 | MS.gene27648 | PPI |
| MS.gene013401 | MS.gene047734 | PPI |
| MS.gene013401 | MS.gene030719 | PPI |
| MS.gene013401 | MS.gene31039 | PPI |
| MS.gene013401 | MS.gene73008 | PPI |
| MS.gene013401 | MS.gene58173 | PPI |
| MS.gene013401 | MS.gene067072 | PPI |
| MS.gene013401 | MS.gene59319 | PPI |
| MS.gene013401 | MS.gene023799 | PPI |
| MS.gene013401 | MS.gene52173 | PPI |
| MS.gene013401 | MS.gene75537 | PPI |
| MS.gene013401 | MS.gene28147 | PPI |
| MS.gene013401 | MS.gene42236 | PPI |
| MS.gene013401 | MS.gene31056 | PPI |
| MS.gene013401 | MS.gene045180 | PPI |
| MS.gene013401 | MS.gene042025 | PPI |
| MS.gene049376 | MS.gene013401 | PPI |
| MS.gene013401 | MS.gene42910 | PPI |
| MS.gene013401 | MS.gene041557 | PPI |
| MS.gene013401 | MS.gene06501 | PPI |
| MS.gene013401 | MS.gene70551 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013401.t1 | MTR_3g094570 | 97.854 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 4.34e-167 | 460 |
| MS.gene013401.t1 | MTR_3g094860 | 96.996 | 233 | 7 | 0 | 1 | 233 | 1 | 233 | 4.12e-165 | 455 |
| MS.gene013401.t1 | MTR_5g098090 | 85.470 | 234 | 33 | 1 | 1 | 233 | 1 | 234 | 2.03e-142 | 398 |
| MS.gene013401.t1 | MTR_8g091910 | 82.051 | 234 | 26 | 2 | 1 | 233 | 1 | 219 | 2.47e-133 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013401.t1 | AT1G74060 | 78.970 | 233 | 49 | 0 | 1 | 233 | 1 | 233 | 4.04e-120 | 341 |
| MS.gene013401.t1 | AT1G74050 | 78.970 | 233 | 49 | 0 | 1 | 233 | 1 | 233 | 8.41e-120 | 340 |
| MS.gene013401.t1 | AT1G18540 | 76.824 | 233 | 54 | 0 | 1 | 233 | 1 | 233 | 3.24e-112 | 321 |
Find 77 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCCGGAAGATTTA+AGG | 0.122904 | 3.4:-86056600 | MS.gene013401:CDS |
| GGCTTCTCGGCGGGAGTTGC+AGG | 0.175419 | 3.4:+86058233 | None:intergenic |
| CCGATACCCCTGATCAATTC+AGG | 0.224276 | 3.4:+86058353 | None:intergenic |
| TTTCTCAAGCAGCTTCCTTC+TGG | 0.237735 | 3.4:-86056563 | MS.gene013401:CDS |
| TTTGATCATCCTTCTTCTCT+TGG | 0.241206 | 3.4:+86054983 | None:intergenic |
| TCAGGTCCATTCAAGATTAA+TGG | 0.243591 | 3.4:-86055284 | MS.gene013401:intron |
| TTGATCATCCTTCTTCTCTT+GGG | 0.285928 | 3.4:+86054984 | None:intergenic |
| TACTCTTGCAGTTCTTTGCT+TGG | 0.312751 | 3.4:+86058385 | None:intergenic |
| TCTGGACTTCTTCTCGTTAC+CGG | 0.334203 | 3.4:-86056545 | MS.gene013401:intron |
| ACCACCGTGCTTGGCTTTGA+TGG | 0.340487 | 3.4:+86058286 | None:intergenic |
| CTTCTTGCCGGAAGATTTAA+GGG | 0.340784 | 3.4:-86056599 | MS.gene013401:CDS |
| TCTCTTTCCCTTAAATCTTC+CGG | 0.346788 | 3.4:+86056592 | None:intergenic |
| TGTACCACAAGCGTGGGATC+TGG | 0.347182 | 3.4:-86058310 | MS.gene013401:CDS |
| CCCATTGAGACGTGTGAATC+AGG | 0.352065 | 3.4:-86055258 | MS.gene013401:CDS |
| AACCTGAGCTTAGTGGGCTT+TGG | 0.360630 | 3.4:+86058155 | None:intergenic |
| CGAGTTCTTTGAGGCAGATA+AGG | 0.375748 | 3.4:-86055123 | MS.gene013401:CDS |
| ACTCTTGCAGTTCTTTGCTT+GGG | 0.381464 | 3.4:+86058386 | None:intergenic |
| TGGCTTCACACCTGCCTTCA+AGG | 0.382880 | 3.4:+86054885 | None:intergenic |
| TTCAGGGCTTCCATTACTCC+TGG | 0.384116 | 3.4:-86056635 | MS.gene013401:intron |
| GCCGTAACCCTGAATTGATC+AGG | 0.416781 | 3.4:-86058361 | MS.gene013401:CDS |
| AGAAGAATTAACACTGTTCC+AGG | 0.418258 | 3.4:+86056617 | None:intergenic |
| CCAAGGTAAGTCTTCAAGTC+TGG | 0.429639 | 3.4:+86054919 | None:intergenic |
| AACCGAAGAAATGTCTACTT+TGG | 0.432126 | 3.4:+86055214 | None:intergenic |
| GGCTTCTTCACATCGTCGGC+GGG | 0.438115 | 3.4:+86058197 | None:intergenic |
| ACAGTGTTAATTCTTCTTGC+CGG | 0.439034 | 3.4:-86056611 | MS.gene013401:CDS |
| CCCTGATCAATTCAGGGTTA+CGG | 0.450408 | 3.4:+86058360 | None:intergenic |
| GTGAATCAGGCATATGTTAT+CGG | 0.451583 | 3.4:-86055245 | MS.gene013401:CDS |
| GCCTGATTCACACGTCTCAA+TGG | 0.452522 | 3.4:+86055257 | None:intergenic |
| CAAGTCTGGAACACTGTCAA+TGG | 0.454071 | 3.4:+86054933 | None:intergenic |
| CGATACCCCTGATCAATTCA+GGG | 0.465988 | 3.4:+86058354 | None:intergenic |
| TGATCATCCTTCTTCTCTTG+GGG | 0.470714 | 3.4:+86054985 | None:intergenic |
| GTAAAACTTAGGTGGCTTCT+CGG | 0.476381 | 3.4:+86058220 | None:intergenic |
| AACCAAAGTAGACATTTCTT+CGG | 0.476825 | 3.4:-86055216 | MS.gene013401:CDS |
| GGGACTCCATTAATCTTGAA+TGG | 0.483082 | 3.4:+86055278 | None:intergenic |
| TGAAGACTTACCTTGGTGCC+AGG | 0.485144 | 3.4:-86054912 | MS.gene013401:CDS |
| AGGGAAAGAACCACCGTGCT+TGG | 0.486637 | 3.4:+86058277 | None:intergenic |
| CCTGATTCACACGTCTCAAT+GGG | 0.486965 | 3.4:+86055258 | None:intergenic |
| AACTTAGGTGGCTTCTCGGC+GGG | 0.490640 | 3.4:+86058224 | None:intergenic |
| CCTGAATTGATCAGGGGTAT+CGG | 0.492309 | 3.4:-86058353 | MS.gene013401:CDS |
| GTACCACAAGCGTGGGATCT+GGG | 0.497259 | 3.4:-86058309 | MS.gene013401:CDS |
| GATCCCACGCTTGTGGTACA+TGG | 0.504975 | 3.4:+86058313 | None:intergenic |
| GGGAGAGAGCGAGTTCTTTG+AGG | 0.505471 | 3.4:-86055132 | MS.gene013401:CDS |
| ACCTGCCTTCAAGGAAAACC+TGG | 0.516282 | 3.4:+86054894 | None:intergenic |
| TAACACTGTTCCAGGAGTAA+TGG | 0.524055 | 3.4:+86056625 | None:intergenic |
| GGTGACGAACCTGAGCTTAG+TGG | 0.535903 | 3.4:+86058148 | None:intergenic |
| GATCAAAAGACTGTTGATGC+TGG | 0.542508 | 3.4:-86054967 | MS.gene013401:CDS |
| GATCATCCTTCTTCTCTTGG+GGG | 0.548827 | 3.4:+86054986 | None:intergenic |
| TCGTCGGCGGGGTAAAACTT+AGG | 0.552424 | 3.4:+86058209 | None:intergenic |
| GCTTTGGCTTGTGCTTGTTG+CGG | 0.553049 | 3.4:+86058171 | None:intergenic |
| CCGTAACCCTGAATTGATCA+GGG | 0.555623 | 3.4:-86058360 | MS.gene013401:CDS |
| AGCCAAAGCCCACTAAGCTC+AGG | 0.559866 | 3.4:-86058157 | MS.gene013401:intron |
| CCAGACTTGAAGACTTACCT+TGG | 0.561891 | 3.4:-86054919 | MS.gene013401:CDS |
| GGGGTATCGGAAAATACTCT+AGG | 0.568283 | 3.4:-86058340 | MS.gene013401:CDS |
| TGGCTTCTTCACATCGTCGG+CGG | 0.569896 | 3.4:+86058196 | None:intergenic |
| GGAGTTGCAGGCTTAGCGAC+GGG | 0.577539 | 3.4:+86058245 | None:intergenic |
| GGGAGTTGCAGGCTTAGCGA+CGG | 0.582599 | 3.4:+86058244 | None:intergenic |
| GTGACGAACCTGAGCTTAGT+GGG | 0.585384 | 3.4:+86058149 | None:intergenic |
| GGCTTGTGCTTGTTGCGGAG+TGG | 0.594085 | 3.4:+86058176 | None:intergenic |
| TGGCCCAGATCCCACGCTTG+TGG | 0.594361 | 3.4:+86058306 | None:intergenic |
| TGATGACAAGTACTTCTCAA+AGG | 0.595456 | 3.4:-86055177 | MS.gene013401:CDS |
| GTTCTTTGAGGCAGATAAGG+AGG | 0.599942 | 3.4:-86055120 | MS.gene013401:intron |
| CTCTAGAAGACCAACTCGTG+TGG | 0.601883 | 3.4:+86054865 | None:intergenic |
| GAGTGGCTTCTTCACATCGT+CGG | 0.602023 | 3.4:+86058193 | None:intergenic |
| GTAACGAGAAGAAGTCCAGA+AGG | 0.620622 | 3.4:+86056548 | None:intergenic |
| CACACGAGTTGGTCTTCTAG+AGG | 0.630211 | 3.4:-86054864 | None:intergenic |
| AGGTGTGAAGCCACACGAGT+TGG | 0.631048 | 3.4:-86054875 | MS.gene013401:CDS |
| TTAGCGACGGGATCGTGACG+AGG | 0.633658 | 3.4:+86058257 | None:intergenic |
| GCTTCTTCACATCGTCGGCG+GGG | 0.637997 | 3.4:+86058198 | None:intergenic |
| TCTGCCATGTACCACAAGCG+TGG | 0.644255 | 3.4:-86058317 | MS.gene013401:CDS |
| TCAAGGAAAACCTGGCACCA+AGG | 0.644709 | 3.4:+86054902 | None:intergenic |
| CTGCCATGTACCACAAGCGT+GGG | 0.650536 | 3.4:-86058316 | MS.gene013401:CDS |
| TGGGCCATCAAAGCCAAGCA+CGG | 0.651557 | 3.4:-86058290 | MS.gene013401:CDS |
| TCGGCGGGGTAAAACTTAGG+TGG | 0.654802 | 3.4:+86058212 | None:intergenic |
| AAACTTAGGTGGCTTCTCGG+CGG | 0.667362 | 3.4:+86058223 | None:intergenic |
| TAGCGACGGGATCGTGACGA+GGG | 0.688534 | 3.4:+86058258 | None:intergenic |
| CGTAACCCTGAATTGATCAG+GGG | 0.696777 | 3.4:-86058359 | MS.gene013401:CDS |
| GCCATCAAAGCCAAGCACGG+TGG | 0.747137 | 3.4:-86058287 | MS.gene013401:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATACAAATTTTCATA+GGG | - | chr3.4:86055576-86055595 | MS.gene013401:intron | 10.0% |
| !! | ATGATAAAATTTATGATGTT+AGG | - | chr3.4:86056010-86056029 | MS.gene013401:intron | 15.0% |
| !! | TATTGTTAATTATGATATGT+TGG | - | chr3.4:86055283-86055302 | MS.gene013401:CDS | 15.0% |
| !!! | GAAAATATACAAATTTTCAT+AGG | - | chr3.4:86055575-86055594 | MS.gene013401:intron | 15.0% |
| !!! | TAAATCTTTTTGAATAAAGT+TGG | - | chr3.4:86055152-86055171 | MS.gene013401:CDS | 15.0% |
| !!! | TTAAACTCTAATTGAAATTT+TGG | - | chr3.4:86056359-86056378 | MS.gene013401:intron | 15.0% |
| !! | AAGAAAACAAGAAATAAGAA+AGG | - | chr3.4:86057702-86057721 | MS.gene013401:intron | 20.0% |
| !! | AGAAAACAAGAAATAAGAAA+GGG | - | chr3.4:86057703-86057722 | MS.gene013401:intron | 20.0% |
| !! | ATCAAATCTAAAGGTTTAAA+TGG | + | chr3.4:86056988-86057007 | None:intergenic | 20.0% |
| !! | TAAACCAAAAAAACAATTAC+CGG | + | chr3.4:86056736-86056755 | None:intergenic | 20.0% |
| !! | TAATTTATTCTTTCTCAAGA+AGG | - | chr3.4:86057266-86057285 | MS.gene013401:intron | 20.0% |
| !! | TGAATGATTTATATAGTTCA+TGG | - | chr3.4:86056594-86056613 | MS.gene013401:CDS | 20.0% |
| !! | TTATCAATAGAAATGAACAA+CGG | + | chr3.4:86055135-86055154 | None:intergenic | 20.0% |
| !!! | AAATTTGAGATTTGATTCAT+TGG | - | chr3.4:86055522-86055541 | MS.gene013401:intron | 20.0% |
| !!! | AATTTTGTTAGTGTCTATAT+TGG | - | chr3.4:86056542-86056561 | MS.gene013401:intron | 20.0% |
| !!! | CACAAATACGTAAATAATTT+TGG | + | chr3.4:86056862-86056881 | None:intergenic | 20.0% |
| !!! | GCTATTTGTTTATTTTGTTT+TGG | - | chr3.4:86055247-86055266 | MS.gene013401:CDS | 20.0% |
| !!! | GTAATTGTTTTTTTGGTTTA+AGG | - | chr3.4:86056736-86056755 | MS.gene013401:intron | 20.0% |
| !!! | TGGAGATATACATATAATTT+TGG | - | chr3.4:86057323-86057342 | MS.gene013401:intron | 20.0% |
| !!! | TGTATTTTGAAGTTCAAATA+TGG | - | chr3.4:86055379-86055398 | MS.gene013401:intron | 20.0% |
| !!! | TTTAGACATTATTTTGAAAC+TGG | + | chr3.4:86057561-86057580 | None:intergenic | 20.0% |
| ! | AAAATTGCTTCTTATACATG+TGG | - | chr3.4:86057243-86057262 | MS.gene013401:intron | 25.0% |
| ! | AACAACAACATTGTAAAGAT+CGG | + | chr3.4:86058230-86058249 | None:intergenic | 25.0% |
| ! | AATTAAGTATCAGGAAAACA+TGG | - | chr3.4:86056039-86056058 | MS.gene013401:intron | 25.0% |
| ! | AGGAATTGAAATTAAGTATC+AGG | - | chr3.4:86056030-86056049 | MS.gene013401:intron | 25.0% |
| ! | ATTAAGTATCAGGAAAACAT+GGG | - | chr3.4:86056040-86056059 | MS.gene013401:intron | 25.0% |
| ! | GTACAACAAGCAAATATATA+TGG | + | chr3.4:86056805-86056824 | None:intergenic | 25.0% |
| ! | GTGAATATATGGAAAATATG+CGG | - | chr3.4:86055675-86055694 | MS.gene013401:intron | 25.0% |
| ! | GTTAATTATGATATGTTGGA+CGG | - | chr3.4:86055287-86055306 | MS.gene013401:intron | 25.0% |
| ! | TGAATATATGGAAAATATGC+GGG | - | chr3.4:86055676-86055695 | MS.gene013401:intron | 25.0% |
| ! | TGTACTACAATCAAATCTAA+AGG | + | chr3.4:86056997-86057016 | None:intergenic | 25.0% |
| ! | TTGAATGTTTACACACATTA+TGG | + | chr3.4:86057211-86057230 | None:intergenic | 25.0% |
| ! | TTTATTAACATGTGTTGAGT+GGG | - | chr3.4:86056074-86056093 | MS.gene013401:intron | 25.0% |
| !! | AAGTTCAAATATGGATTTTG+GGG | - | chr3.4:86055388-86055407 | MS.gene013401:intron | 25.0% |
| !! | AATTAAGTTTTTCACCTTTG+AGG | + | chr3.4:86057839-86057858 | None:intergenic | 25.0% |
| !! | ATACAAATTTTCATAGGGTT+GGG | - | chr3.4:86055581-86055600 | MS.gene013401:intron | 25.0% |
| !! | GAAGTTCAAATATGGATTTT+GGG | - | chr3.4:86055387-86055406 | MS.gene013401:intron | 25.0% |
| !! | TATACAAATTTTCATAGGGT+TGG | - | chr3.4:86055580-86055599 | MS.gene013401:intron | 25.0% |
| !! | TGAAGTTCAAATATGGATTT+TGG | - | chr3.4:86055386-86055405 | MS.gene013401:intron | 25.0% |
| !! | TTTTATTAACATGTGTTGAG+TGG | - | chr3.4:86056073-86056092 | MS.gene013401:intron | 25.0% |
| !!! | ATAGACATTTTGAAGTTCTT+TGG | - | chr3.4:86056304-86056323 | MS.gene013401:intron | 25.0% |
| !!! | GAAATGGATTTTGTGAATAA+AGG | - | chr3.4:86055309-86055328 | MS.gene013401:intron | 25.0% |
| !!! | TGAGTTGTTTTAGAATTCTT+GGG | - | chr3.4:86055455-86055474 | MS.gene013401:intron | 25.0% |
| !!! | TTGAGTTGTTTTAGAATTCT+TGG | - | chr3.4:86055454-86055473 | MS.gene013401:intron | 25.0% |
| !!! | TTTAAATGCTGTTTCGTTTT+TGG | - | chr3.4:86055974-86055993 | MS.gene013401:intron | 25.0% |
| AAAGGGTGAAAAAGCAAATA+TGG | - | chr3.4:86057720-86057739 | MS.gene013401:intron | 30.0% | |
| AAATATGGGGGTTAATGATA+AGG | - | chr3.4:86057735-86057754 | MS.gene013401:intron | 30.0% | |
| AACCAAAGTAGACATTTCTT+CGG | - | chr3.4:86058043-86058062 | MS.gene013401:intron | 30.0% | |
| AACTTCAAAATACAGTTAGC+AGG | + | chr3.4:86055373-86055392 | None:intergenic | 30.0% | |
| AAGGGTGAAAAAGCAAATAT+GGG | - | chr3.4:86057721-86057740 | MS.gene013401:intron | 30.0% | |
| AATGTAGCTAAGGATGATTA+CGG | + | chr3.4:86057354-86057373 | None:intergenic | 30.0% | |
| ACAATAGAGACTGTCATATT+TGG | - | chr3.4:86056961-86056980 | MS.gene013401:intron | 30.0% | |
| ACTTCAAAATACAGTTAGCA+GGG | + | chr3.4:86055372-86055391 | None:intergenic | 30.0% | |
| AGTAAATGTGAATGTAGCTA+AGG | + | chr3.4:86057364-86057383 | None:intergenic | 30.0% | |
| CAAGCTAAACAACATCAAAA+AGG | + | chr3.4:86055851-86055870 | None:intergenic | 30.0% | |
| CGAATCTTTCTGTGAATATA+TGG | - | chr3.4:86055664-86055683 | MS.gene013401:intron | 30.0% | |
| GAAGAAAAAGATAGTCCTAT+AGG | - | chr3.4:86057020-86057039 | MS.gene013401:intron | 30.0% | |
| GAGAATGAACAAATGAAGAT+TGG | + | chr3.4:86057949-86057968 | None:intergenic | 30.0% | |
| GATTGAAACTAAATCAACCT+TGG | - | chr3.4:86056881-86056900 | MS.gene013401:intron | 30.0% | |
| TAATGATAAGGAAAGTAGGT+AGG | - | chr3.4:86057747-86057766 | MS.gene013401:intron | 30.0% | |
| TACGAATTGAATATTACCAC+CGG | - | chr3.4:86055176-86055195 | MS.gene013401:CDS | 30.0% | |
| TAGATACACTTTGAATTTGC+CGG | + | chr3.4:86055198-86055217 | None:intergenic | 30.0% | |
| TAGGAATTGTATTCGTGTTT+GGG | - | chr3.4:86055428-86055447 | MS.gene013401:intron | 30.0% | |
| TATCAACATTATGGATATGC+CGG | - | chr3.4:86056211-86056230 | MS.gene013401:intron | 30.0% | |
| TGAATAAAGGATGGAGAAAT+GGG | - | chr3.4:86055322-86055341 | MS.gene013401:intron | 30.0% | |
| TGATATTAAACACGCACATA+GGG | - | chr3.4:86055619-86055638 | MS.gene013401:intron | 30.0% | |
| TGCATCATCAATATAACTCA+TGG | + | chr3.4:86056827-86056846 | None:intergenic | 30.0% | |
| TTAGGAATTGTATTCGTGTT+TGG | - | chr3.4:86055427-86055446 | MS.gene013401:intron | 30.0% | |
| TTATTAACATGTGTTGAGTG+GGG | - | chr3.4:86056075-86056094 | MS.gene013401:intron | 30.0% | |
| TTCATGTTATTACCTGAGAT+TGG | - | chr3.4:86056769-86056788 | MS.gene013401:intron | 30.0% | |
| ! | AAGTAATGACTTGTGAGATA+TGG | - | chr3.4:86056938-86056957 | MS.gene013401:intron | 30.0% |
| ! | CATGAGTCTACATTACATTT+TGG | - | chr3.4:86057442-86057461 | MS.gene013401:intron | 30.0% |
| ! | GGTTTGATTTATGTGTGATT+AGG | - | chr3.4:86055409-86055428 | MS.gene013401:intron | 30.0% |
| ! | GTTTTCTTACATTACAGCTT+CGG | + | chr3.4:86057690-86057709 | None:intergenic | 30.0% |
| ! | TACAAATTTTCATAGGGTTG+GGG | - | chr3.4:86055582-86055601 | MS.gene013401:intron | 30.0% |
| ! | TGGATTTTGTGAATAAAGGA+TGG | - | chr3.4:86055313-86055332 | MS.gene013401:intron | 30.0% |
| ! | TTTTCTTACATTACAGCTTC+GGG | + | chr3.4:86057689-86057708 | None:intergenic | 30.0% |
| !!! | AGTTCATGGTTTTGTTTTCA+GGG | - | chr3.4:86056608-86056627 | MS.gene013401:CDS | 30.0% |
| !!! | GAGCACTTTTTTATCCTAAA+AGG | + | chr3.4:86058254-86058273 | None:intergenic | 30.0% |
| !!! | GTTACCGGTAATTGTTTTTT+TGG | - | chr3.4:86056729-86056748 | MS.gene013401:intron | 30.0% |
| !!! | TAGTTCATGGTTTTGTTTTC+AGG | - | chr3.4:86056607-86056626 | MS.gene013401:CDS | 30.0% |
| AAAGTTGAACAACAACCCAA+TGG | + | chr3.4:86057796-86057815 | None:intergenic | 35.0% | |
| AACCGAAGAAATGTCTACTT+TGG | + | chr3.4:86058048-86058067 | None:intergenic | 35.0% | |
| AATAGTCAGTGTCTTGATTG+TGG | - | chr3.4:86055899-86055918 | MS.gene013401:intron | 35.0% | |
| ACAGTGTTAATTCTTCTTGC+CGG | - | chr3.4:86056648-86056667 | MS.gene013401:intron | 35.0% | |
| AGAAGAATTAACACTGTTCC+AGG | + | chr3.4:86056645-86056664 | None:intergenic | 35.0% | |
| AGGGTGAAAAAGCAAATATG+GGG | - | chr3.4:86057722-86057741 | MS.gene013401:intron | 35.0% | |
| AGTAAGGGATCTCAATAGTT+GGG | - | chr3.4:86057502-86057521 | MS.gene013401:intron | 35.0% | |
| ATCCCAGAAAAAGACTAAGA+AGG | - | chr3.4:86058106-86058125 | MS.gene013401:intron | 35.0% | |
| ATTAATCTTGAATGGACCTG+AGG | + | chr3.4:86057976-86057995 | None:intergenic | 35.0% | |
| ATTAGTTGGATGAGATCAGA+TGG | + | chr3.4:86057592-86057611 | None:intergenic | 35.0% | |
| CAACTCACTTTCTAACCTAT+AGG | + | chr3.4:86057038-86057057 | None:intergenic | 35.0% | |
| CTTCTGCTTCTTAGTAAACA+TGG | - | chr3.4:86057303-86057322 | MS.gene013401:intron | 35.0% | |
| GAGACTAAAGAAGGTCTTTA+AGG | + | chr3.4:86057913-86057932 | None:intergenic | 35.0% | |
| GGAACATAAAATACTGACCA+AGG | + | chr3.4:86056901-86056920 | None:intergenic | 35.0% | |
| GGGTTAATGATAAGGAAAGT+AGG | - | chr3.4:86057743-86057762 | MS.gene013401:intron | 35.0% | |
| GTAGACTCATGATACAAGAA+GGG | + | chr3.4:86057433-86057452 | None:intergenic | 35.0% | |
| GTGAATAAAGGATGGAGAAA+TGG | - | chr3.4:86055321-86055340 | MS.gene013401:intron | 35.0% | |
| GTGAATCAGGCATATGTTAT+CGG | - | chr3.4:86058014-86058033 | MS.gene013401:intron | 35.0% | |
| GTGATATTAAACACGCACAT+AGG | - | chr3.4:86055618-86055637 | MS.gene013401:intron | 35.0% | |
| TACAAGAAGGGTAGATGAAA+TGG | + | chr3.4:86057421-86057440 | None:intergenic | 35.0% | |
| TATGATATGTTGGACGGAAA+TGG | - | chr3.4:86055293-86055312 | MS.gene013401:intron | 35.0% | |
| TATTAACATGTGTTGAGTGG+GGG | - | chr3.4:86056076-86056095 | MS.gene013401:intron | 35.0% | |
| TCAACTTTGACAAGCAAAAC+AGG | - | chr3.4:86057808-86057827 | MS.gene013401:intron | 35.0% | |
| TCAGGTCCATTCAAGATTAA+TGG | - | chr3.4:86057975-86057994 | MS.gene013401:intron | 35.0% | |
| TCCCAGAAAAAGACTAAGAA+GGG | - | chr3.4:86058107-86058126 | MS.gene013401:intron | 35.0% | |
| TCTCTTTCCCTTAAATCTTC+CGG | + | chr3.4:86056670-86056689 | None:intergenic | 35.0% | |
| TGAACCAATAGAGTGTACTA+AGG | + | chr3.4:86055930-86055949 | None:intergenic | 35.0% | |
| TGATGACAAGTACTTCTCAA+AGG | - | chr3.4:86058082-86058101 | MS.gene013401:intron | 35.0% | |
| TGTAGACTCATGATACAAGA+AGG | + | chr3.4:86057434-86057453 | None:intergenic | 35.0% | |
| TGTGAATCTCAGTCATTAGT+TGG | + | chr3.4:86057606-86057625 | None:intergenic | 35.0% | |
| TGTGTTTGGTTGAAAAGTGA+AGG | - | chr3.4:86057085-86057104 | MS.gene013401:intron | 35.0% | |
| TTAAGCCACAATGAGTTGTT+CGG | + | chr3.4:86057534-86057553 | None:intergenic | 35.0% | |
| TTGATCATCCTTCTTCTCTT+GGG | + | chr3.4:86058278-86058297 | None:intergenic | 35.0% | |
| TTGTAAAGATCGGCATACAA+AGG | + | chr3.4:86058220-86058239 | None:intergenic | 35.0% | |
| TTTCTTACATTACAGCTTCG+GGG | + | chr3.4:86057688-86057707 | None:intergenic | 35.0% | |
| TTTGATCATCCTTCTTCTCT+TGG | + | chr3.4:86058279-86058298 | None:intergenic | 35.0% | |
| ! | AAAGTATGGAAGTATGGTGT+AGG | - | chr3.4:86055345-86055364 | MS.gene013401:intron | 35.0% |
| ! | AATGGGAAAGTATGGAAGTA+TGG | - | chr3.4:86055339-86055358 | MS.gene013401:intron | 35.0% |
| ! | ATCAAACTTATCGTTCTGAG+CGG | - | chr3.4:86057648-86057667 | MS.gene013401:intron | 35.0% |
| ! | GGTCAGTATTTTATGTTCCA+GGG | - | chr3.4:86056902-86056921 | MS.gene013401:intron | 35.0% |
| ! | TCAAGACACTGACTATTAGT+TGG | + | chr3.4:86055896-86055915 | None:intergenic | 35.0% |
| ! | TGGTCAGTATTTTATGTTCC+AGG | - | chr3.4:86056901-86056920 | MS.gene013401:intron | 35.0% |
| !! | CAATGTTGTTGTTGCCTTTT+AGG | - | chr3.4:86058237-86058256 | MS.gene013401:CDS | 35.0% |
| !! | TCCCTTCTTAGTCTTTTTCT+GGG | + | chr3.4:86058111-86058130 | None:intergenic | 35.0% |
| !! | TTAGTACACTCTATTGGTTC+AGG | - | chr3.4:86055929-86055948 | MS.gene013401:intron | 35.0% |
| !!! | ATATTTTTTTTGGGTACCGG+GGG | - | chr3.4:86056099-86056118 | MS.gene013401:intron | 35.0% |
| !!! | GAGTGGGGGATATTTTTTTT+GGG | - | chr3.4:86056090-86056109 | MS.gene013401:intron | 35.0% |
| !!! | GATATTTTTTTTGGGTACCG+GGG | - | chr3.4:86056098-86056117 | MS.gene013401:intron | 35.0% |
| !!! | GGATATTTTTTTTGGGTACC+GGG | - | chr3.4:86056097-86056116 | MS.gene013401:intron | 35.0% |
| !!! | GGGATATTTTTTTTGGGTAC+CGG | - | chr3.4:86056096-86056115 | MS.gene013401:intron | 35.0% |
| !!! | TGAGTGGGGGATATTTTTTT+TGG | - | chr3.4:86056089-86056108 | MS.gene013401:intron | 35.0% |
| ACAACAATGCAACAGCCATT+GGG | - | chr3.4:86057778-86057797 | MS.gene013401:intron | 40.0% | |
| ACAGGCAGCTATCAACATTA+TGG | - | chr3.4:86056202-86056221 | MS.gene013401:intron | 40.0% | |
| ACTCTTGCAGTTCTTTGCTT+GGG | + | chr3.4:86054876-86054895 | None:intergenic | 40.0% | |
| ACTTGTCTAACTGATATCCC+TGG | + | chr3.4:86056922-86056941 | None:intergenic | 40.0% | |
| AGATGAGAGGAGACTAAAGA+AGG | + | chr3.4:86057922-86057941 | None:intergenic | 40.0% | |
| AGGAAAACATGCAGTCAGTA+AGG | - | chr3.4:86057486-86057505 | MS.gene013401:intron | 40.0% | |
| AGTATCAGGAAAACATGGGT+TGG | - | chr3.4:86056044-86056063 | MS.gene013401:intron | 40.0% | |
| ATACACTTTGAATTTGCCGG+TGG | + | chr3.4:86055195-86055214 | None:intergenic | 40.0% | |
| CAAAACAGGACAAACCTCAA+AGG | - | chr3.4:86057822-86057841 | MS.gene013401:intron | 40.0% | |
| CAGTAAGGGATCTCAATAGT+TGG | - | chr3.4:86057501-86057520 | MS.gene013401:intron | 40.0% | |
| CCAATAGAGTGTACTAAGGA+TGG | + | chr3.4:86055926-86055945 | None:intergenic | 40.0% | |
| CCATCCTTAGTACACTCTAT+TGG | - | chr3.4:86055923-86055942 | MS.gene013401:intron | 40.0% | |
| CTCAAAGAGACAAGGAATGA+TGG | - | chr3.4:86056147-86056166 | MS.gene013401:intron | 40.0% | |
| CTTCTTGCCGGAAGATTTAA+GGG | - | chr3.4:86056660-86056679 | MS.gene013401:intron | 40.0% | |
| GATCAAAAGACTGTTGATGC+TGG | - | chr3.4:86058292-86058311 | MS.gene013401:CDS | 40.0% | |
| GATGGAGAAATGGGAAAGTA+TGG | - | chr3.4:86055331-86055350 | MS.gene013401:intron | 40.0% | |
| GCTCAGAACGATAAGTTTGA+TGG | + | chr3.4:86057649-86057668 | None:intergenic | 40.0% | |
| GGAAAACATGCAGTCAGTAA+GGG | - | chr3.4:86057487-86057506 | MS.gene013401:intron | 40.0% | |
| GGGACTCCATTAATCTTGAA+TGG | + | chr3.4:86057984-86058003 | None:intergenic | 40.0% | |
| GGGTGAAAAAGCAAATATGG+GGG | - | chr3.4:86057723-86057742 | MS.gene013401:intron | 40.0% | |
| GGTTACATACAACCAATCTC+AGG | + | chr3.4:86056784-86056803 | None:intergenic | 40.0% | |
| GTAAAACTTAGGTGGCTTCT+CGG | + | chr3.4:86055042-86055061 | None:intergenic | 40.0% | |
| GTTAGAAAGTGAGTTGCTGT+TGG | - | chr3.4:86057042-86057061 | MS.gene013401:intron | 40.0% | |
| GTTCGGTAAATCACTGTGTT+TGG | - | chr3.4:86057071-86057090 | MS.gene013401:intron | 40.0% | |
| TAACACTGTTCCAGGAGTAA+TGG | + | chr3.4:86056637-86056656 | None:intergenic | 40.0% | |
| TACTCTTGCAGTTCTTTGCT+TGG | + | chr3.4:86054877-86054896 | None:intergenic | 40.0% | |
| TCTTCTTGCCGGAAGATTTA+AGG | - | chr3.4:86056659-86056678 | MS.gene013401:intron | 40.0% | |
| TGATCATCCTTCTTCTCTTG+GGG | + | chr3.4:86058277-86058296 | None:intergenic | 40.0% | |
| TGCTTTCGTCCATGTGTTTA+CGG | - | chr3.4:86055719-86055738 | MS.gene013401:intron | 40.0% | |
| TTGTTCATTCTCACTTCCTC+AGG | - | chr3.4:86057957-86057976 | MS.gene013401:intron | 40.0% | |
| ! | CATGTTTTCCTTGACTGTTG+CGG | + | chr3.4:86057477-86057496 | None:intergenic | 40.0% |
| ! | TTTTCCTGTTGTTCGTCTCA+GGG | - | chr3.4:86056258-86056277 | MS.gene013401:intron | 40.0% |
| !! | CTCCCTTCTTAGTCTTTTTC+TGG | + | chr3.4:86058112-86058131 | None:intergenic | 40.0% |
| !! | TTTAGCTTGTGTGCTCTGTT+TGG | - | chr3.4:86055862-86055881 | MS.gene013401:intron | 40.0% |
| !!! | TATTTTTTTTGGGTACCGGG+GGG | - | chr3.4:86056100-86056119 | MS.gene013401:intron | 40.0% |
| AACAACAGGAAAAGGAGGAG+GGG | + | chr3.4:86056251-86056270 | None:intergenic | 45.0% | |
| AGACGAACAACAGGAAAAGG+AGG | + | chr3.4:86056256-86056275 | None:intergenic | 45.0% | |
| CAACATTATGGATATGCCGG+TGG | - | chr3.4:86056214-86056233 | MS.gene013401:intron | 45.0% | |
| CACAACAATGCAACAGCCAT+TGG | - | chr3.4:86057777-86057796 | MS.gene013401:intron | 45.0% | |
| CCAAGGTAAGTCTTCAAGTC+TGG | + | chr3.4:86058343-86058362 | None:intergenic | 45.0% | |
| CCAGACTTGAAGACTTACCT+TGG | - | chr3.4:86058340-86058359 | MS.gene013401:CDS | 45.0% | |
| CCCTGATCAATTCAGGGTTA+CGG | + | chr3.4:86054902-86054921 | None:intergenic | 45.0% | |
| CCGTAACCCTGAATTGATCA+GGG | - | chr3.4:86054899-86054918 | MS.gene013401:CDS | 45.0% | |
| CCTGATTCACACGTCTCAAT+GGG | + | chr3.4:86058004-86058023 | None:intergenic | 45.0% | |
| CGATACCCCTGATCAATTCA+GGG | + | chr3.4:86054908-86054927 | None:intergenic | 45.0% | |
| CGTAACCCTGAATTGATCAG+GGG | - | chr3.4:86054900-86054919 | MS.gene013401:CDS | 45.0% | |
| CTCACTGCGAAGTATGGATT+GGG | + | chr3.4:86056175-86056194 | None:intergenic | 45.0% | |
| CTGAGACGAACAACAGGAAA+AGG | + | chr3.4:86056259-86056278 | None:intergenic | 45.0% | |
| GAAAAACAACACGAGTGCGA+CGG | + | chr3.4:86055772-86055791 | None:intergenic | 45.0% | |
| GAACAACAGGAAAAGGAGGA+GGG | + | chr3.4:86056252-86056271 | None:intergenic | 45.0% | |
| GAAGACCGAACAACTCATTG+TGG | - | chr3.4:86057526-86057545 | MS.gene013401:intron | 45.0% | |
| GATCATCCTTCTTCTCTTGG+GGG | + | chr3.4:86058276-86058295 | None:intergenic | 45.0% | |
| GGTTCAGTCAAGTACGATGT+TGG | - | chr3.4:86056124-86056143 | MS.gene013401:intron | 45.0% | |
| GTAAACACATGGACGAAAGC+AGG | + | chr3.4:86055720-86055739 | None:intergenic | 45.0% | |
| GTAACGAGAAGAAGTCCAGA+AGG | + | chr3.4:86056714-86056733 | None:intergenic | 45.0% | |
| TCTGGACTTCTTCTCGTTAC+CGG | - | chr3.4:86056714-86056733 | MS.gene013401:intron | 45.0% | |
| TTCGTCCATGTGTTTACGGT+CGG | - | chr3.4:86055723-86055742 | MS.gene013401:intron | 45.0% | |
| TTTCCTGTTGTTCGTCTCAG+GGG | - | chr3.4:86056259-86056278 | MS.gene013401:intron | 45.0% | |
| TTTCTCAAGCAGCTTCCTTC+TGG | - | chr3.4:86056696-86056715 | MS.gene013401:intron | 45.0% | |
| ! | AAAGTGAGTTGCTGTTGGAG+GGG | - | chr3.4:86057047-86057066 | MS.gene013401:intron | 45.0% |
| ! | AGAAAGTGAGTTGCTGTTGG+AGG | - | chr3.4:86057045-86057064 | MS.gene013401:intron | 45.0% |
| ! | CAAGTCTGGAACACTGTCAA+TGG | + | chr3.4:86058329-86058348 | None:intergenic | 45.0% |
| ! | CCTGAATTGATCAGGGGTAT+CGG | - | chr3.4:86054906-86054925 | MS.gene013401:CDS | 45.0% |
| ! | CTTTTCCTGTTGTTCGTCTC+AGG | - | chr3.4:86056257-86056276 | MS.gene013401:intron | 45.0% |
| ! | GAAAGTGAGTTGCTGTTGGA+GGG | - | chr3.4:86057046-86057065 | MS.gene013401:intron | 45.0% |
| ! | GAAGATTGGTCAGAGATGAG+AGG | + | chr3.4:86057935-86057954 | None:intergenic | 45.0% |
| !! | AGGAAAACATGGGTTGGCTT+TGG | - | chr3.4:86056050-86056069 | MS.gene013401:intron | 45.0% |
| !! | CGAGTTCTTTGAGGCAGATA+AGG | - | chr3.4:86058136-86058155 | MS.gene013401:intron | 45.0% |
| !! | GATGTTGGCTCAAAGAGACA+AGG | - | chr3.4:86056139-86056158 | MS.gene013401:intron | 45.0% |
| !! | GGGGTATCGGAAAATACTCT+AGG | - | chr3.4:86054919-86054938 | MS.gene013401:CDS | 45.0% |
| !! | GTACACTCTATTGGTTCAGG+TGG | - | chr3.4:86055932-86055951 | MS.gene013401:intron | 45.0% |
| !! | GTTCTTTGAGGCAGATAAGG+AGG | - | chr3.4:86058139-86058158 | MS.gene013401:intron | 45.0% |
| !!! | ATTTTTTTTGGGTACCGGGG+GGG | - | chr3.4:86056101-86056120 | MS.gene013401:intron | 45.0% |
| AAACTTAGGTGGCTTCTCGG+CGG | + | chr3.4:86055039-86055058 | None:intergenic | 50.0% | |
| ACAACAGGAAAAGGAGGAGG+GGG | + | chr3.4:86056250-86056269 | None:intergenic | 50.0% | |
| ACCTACCGACCGTAAACACA+TGG | + | chr3.4:86055731-86055750 | None:intergenic | 50.0% | |
| ACCTGCCTTCAAGGAAAACC+TGG | + | chr3.4:86058368-86058387 | None:intergenic | 50.0% | |
| CATTATGGATATGCCGGTGG+CGG | - | chr3.4:86056217-86056236 | MS.gene013401:intron | 50.0% | |
| CCCATTGAGACGTGTGAATC+AGG | - | chr3.4:86058001-86058020 | MS.gene013401:intron | 50.0% | |
| CCGATACCCCTGATCAATTC+AGG | + | chr3.4:86054909-86054928 | None:intergenic | 50.0% | |
| CGAACAACAGGAAAAGGAGG+AGG | + | chr3.4:86056253-86056272 | None:intergenic | 50.0% | |
| GAGTGGCTTCTTCACATCGT+CGG | + | chr3.4:86055069-86055088 | None:intergenic | 50.0% | |
| GCCGTAACCCTGAATTGATC+AGG | - | chr3.4:86054898-86054917 | MS.gene013401:CDS | 50.0% | |
| GCCTGATTCACACGTCTCAA+TGG | + | chr3.4:86058005-86058024 | None:intergenic | 50.0% | |
| GCTCACTGCGAAGTATGGAT+TGG | + | chr3.4:86056176-86056195 | None:intergenic | 50.0% | |
| GGCTGTTGCATTGTTGTGCA+AGG | + | chr3.4:86057775-86057794 | None:intergenic | 50.0% | |
| GTGACGAACCTGAGCTTAGT+GGG | + | chr3.4:86055113-86055132 | None:intergenic | 50.0% | |
| TCAAGGAAAACCTGGCACCA+AGG | + | chr3.4:86058360-86058379 | None:intergenic | 50.0% | |
| TCCATGTGTTTACGGTCGGT+AGG | - | chr3.4:86055727-86055746 | MS.gene013401:intron | 50.0% | |
| TTCAGGGCTTCCATTACTCC+TGG | - | chr3.4:86056624-86056643 | MS.gene013401:CDS | 50.0% | |
| TTCCTGTTGTTCGTCTCAGG+GGG | - | chr3.4:86056260-86056279 | MS.gene013401:intron | 50.0% | |
| !! | AACCTGAGCTTAGTGGGCTT+TGG | + | chr3.4:86055107-86055126 | None:intergenic | 50.0% |
| !! | CATCGATTCCGCAACAGTCA+AGG | - | chr3.4:86057466-86057485 | MS.gene013401:intron | 50.0% |
| !! | GCTTTGGCTTGTGCTTGTTG+CGG | + | chr3.4:86055091-86055110 | None:intergenic | 50.0% |
| !! | TGAAGACTTACCTTGGTGCC+AGG | - | chr3.4:86058347-86058366 | MS.gene013401:CDS | 50.0% |
| !! | TGGTGCCAGGTTTTCCTTGA+AGG | - | chr3.4:86058360-86058379 | MS.gene013401:CDS | 50.0% |
| !!! | TTTTTTTTGGGTACCGGGGG+GGG | - | chr3.4:86056102-86056121 | MS.gene013401:intron | 50.0% |
| AACTTAGGTGGCTTCTCGGC+GGG | + | chr3.4:86055038-86055057 | None:intergenic | 55.0% | |
| AGCCAAAGCCCACTAAGCTC+AGG | - | chr3.4:86055102-86055121 | MS.gene013401:intron | 55.0% | |
| AGGGAAAGAACCACCGTGCT+TGG | + | chr3.4:86054985-86055004 | None:intergenic | 55.0% | |
| AGGTGTGAAGCCACACGAGT+TGG | - | chr3.4:86058384-86058403 | MS.gene013401:CDS | 55.0% | |
| AGTGCTCCCCCAAGAGAAGA+AGG | - | chr3.4:86058267-86058286 | MS.gene013401:CDS | 55.0% | |
| CACATGGACGAAAGCAGGTC+AGG | + | chr3.4:86055715-86055734 | None:intergenic | 55.0% | |
| CATACTTCGCAGTGAGCAGC+GGG | - | chr3.4:86056179-86056198 | MS.gene013401:intron | 55.0% | |
| CCATACTTCGCAGTGAGCAG+CGG | - | chr3.4:86056178-86056197 | MS.gene013401:intron | 55.0% | |
| CTGCCATGTACCACAAGCGT+GGG | - | chr3.4:86054943-86054962 | MS.gene013401:CDS | 55.0% | |
| GATCCCACGCTTGTGGTACA+TGG | + | chr3.4:86054949-86054968 | None:intergenic | 55.0% | |
| GGGAGAGAGCGAGTTCTTTG+AGG | - | chr3.4:86058127-86058146 | MS.gene013401:intron | 55.0% | |
| GGTGACGAACCTGAGCTTAG+TGG | + | chr3.4:86055114-86055133 | None:intergenic | 55.0% | |
| GTACCACAAGCGTGGGATCT+GGG | - | chr3.4:86054950-86054969 | MS.gene013401:CDS | 55.0% | |
| TCGGCGGGGTAAAACTTAGG+TGG | + | chr3.4:86055050-86055069 | None:intergenic | 55.0% | |
| TCGTCGGCGGGGTAAAACTT+AGG | + | chr3.4:86055053-86055072 | None:intergenic | 55.0% | |
| TCTGCCATGTACCACAAGCG+TGG | - | chr3.4:86054942-86054961 | MS.gene013401:CDS | 55.0% | |
| TGGCTTCACACCTGCCTTCA+AGG | + | chr3.4:86058377-86058396 | None:intergenic | 55.0% | |
| TGGCTTCTTCACATCGTCGG+CGG | + | chr3.4:86055066-86055085 | None:intergenic | 55.0% | |
| TGGGCCATCAAAGCCAAGCA+CGG | - | chr3.4:86054969-86054988 | MS.gene013401:CDS | 55.0% | |
| TGTACCACAAGCGTGGGATC+TGG | - | chr3.4:86054949-86054968 | MS.gene013401:CDS | 55.0% | |
| ! | GCCAGGTTTTCCTTGAAGGC+AGG | - | chr3.4:86058364-86058383 | MS.gene013401:CDS | 55.0% |
| !! | ACCACCGTGCTTGGCTTTGA+TGG | + | chr3.4:86054976-86054995 | None:intergenic | 55.0% |
| !! | GTTGCTGTTGGAGGGGTGTT+CGG | - | chr3.4:86057054-86057073 | MS.gene013401:intron | 55.0% |
| !!! | TTTTTTTGGGTACCGGGGGG+GGG | - | chr3.4:86056103-86056122 | MS.gene013401:intron | 55.0% |
| AGCCCCCTGAGACGAACAAC+AGG | + | chr3.4:86056265-86056284 | None:intergenic | 60.0% | |
| CCGCTGCTCACTGCGAAGTA+TGG | + | chr3.4:86056181-86056200 | None:intergenic | 60.0% | |
| GCCATCAAAGCCAAGCACGG+TGG | - | chr3.4:86054972-86054991 | MS.gene013401:CDS | 60.0% | |
| GCTTCTTCACATCGTCGGCG+GGG | + | chr3.4:86055064-86055083 | None:intergenic | 60.0% | |
| GGAGTTGCAGGCTTAGCGAC+GGG | + | chr3.4:86055017-86055036 | None:intergenic | 60.0% | |
| GGCTTCTTCACATCGTCGGC+GGG | + | chr3.4:86055065-86055084 | None:intergenic | 60.0% | |
| GGGAGTTGCAGGCTTAGCGA+CGG | + | chr3.4:86055018-86055037 | None:intergenic | 60.0% | |
| TACTTGACTGAACCCCCCCC+CGG | + | chr3.4:86056118-86056137 | None:intergenic | 60.0% | |
| TAGCGACGGGATCGTGACGA+GGG | + | chr3.4:86055004-86055023 | None:intergenic | 60.0% | |
| TTAGCGACGGGATCGTGACG+AGG | + | chr3.4:86055005-86055024 | None:intergenic | 60.0% | |
| ! | ATCGTTCTGAGCGGCGACCA+TGG | - | chr3.4:86057657-86057676 | MS.gene013401:intron | 60.0% |
| ! | GGCTTGTGCTTGTTGCGGAG+TGG | + | chr3.4:86055086-86055105 | None:intergenic | 60.0% |
| ! | TCGTTCTGAGCGGCGACCAT+GGG | - | chr3.4:86057658-86057677 | MS.gene013401:intron | 60.0% |
| CAGGAAAAGGAGGAGGGGGC+TGG | + | chr3.4:86056246-86056265 | None:intergenic | 65.0% | |
| TGGCCCAGATCCCACGCTTG+TGG | + | chr3.4:86054956-86054975 | None:intergenic | 65.0% | |
| TTCGCAGTGAGCAGCGGGAC+AGG | - | chr3.4:86056184-86056203 | MS.gene013401:intron | 65.0% | |
| ! | CGTTCTGAGCGGCGACCATG+GGG | - | chr3.4:86057659-86057678 | MS.gene013401:intron | 65.0% |
| ! | GTTCTGAGCGGCGACCATGG+GGG | - | chr3.4:86057660-86057679 | MS.gene013401:intron | 65.0% |
| ACAGCTTCGGGGCTCCCCCA+TGG | + | chr3.4:86057677-86057696 | None:intergenic | 70.0% | |
| GGCTTCTCGGCGGGAGTTGC+AGG | + | chr3.4:86055029-86055048 | None:intergenic | 70.0% | |
| AGGGGGCTGGAAGCCGCCAC+CGG | + | chr3.4:86056233-86056252 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 86054867 | 86058414 | 86054867 | ID=MS.gene013401 |
| chr3.4 | mRNA | 86054867 | 86058414 | 86054867 | ID=MS.gene013401.t1;Parent=MS.gene013401 |
| chr3.4 | exon | 86058158 | 86058414 | 86058158 | ID=MS.gene013401.t1.exon1;Parent=MS.gene013401.t1 |
| chr3.4 | CDS | 86058158 | 86058414 | 86058158 | ID=cds.MS.gene013401.t1;Parent=MS.gene013401.t1 |
| chr3.4 | exon | 86056546 | 86056652 | 86056546 | ID=MS.gene013401.t1.exon2;Parent=MS.gene013401.t1 |
| chr3.4 | CDS | 86056546 | 86056652 | 86056546 | ID=cds.MS.gene013401.t1;Parent=MS.gene013401.t1 |
| chr3.4 | exon | 86055121 | 86055302 | 86055121 | ID=MS.gene013401.t1.exon3;Parent=MS.gene013401.t1 |
| chr3.4 | CDS | 86055121 | 86055302 | 86055121 | ID=cds.MS.gene013401.t1;Parent=MS.gene013401.t1 |
| chr3.4 | exon | 86054867 | 86055022 | 86054867 | ID=MS.gene013401.t1.exon4;Parent=MS.gene013401.t1 |
| chr3.4 | CDS | 86054867 | 86055022 | 86054867 | ID=cds.MS.gene013401.t1;Parent=MS.gene013401.t1 |
| Gene Sequence |
| Protein sequence |
