Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31056.t1 | XP_003602457.1 | 98.3 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 3.60E-122 | 447.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31056.t1 | P34091 | 80.6 | 232 | 45 | 0 | 2 | 233 | 3 | 234 | 1.1e-100 | 367.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31056.t1 | G7J9R6 | 98.3 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.6e-122 | 447.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene31056 | 0.877236 | 7.39E-69 | -1.69E-46 |
| MS.gene051925 | MS.gene31056 | 0.851439 | 8.87E-61 | -1.69E-46 |
| MS.gene051927 | MS.gene31056 | 0.846233 | 2.47E-59 | -1.69E-46 |
| MS.gene052666 | MS.gene31056 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene05491 | MS.gene31056 | 0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene31056 | 0.857903 | 1.19E-62 | -1.69E-46 |
| MS.gene060299 | MS.gene31056 | 0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene060483 | MS.gene31056 | 0.806841 | 6.76E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70316 | MS.gene31056 | PPI |
| MS.gene06481 | MS.gene31056 | PPI |
| MS.gene70551 | MS.gene31056 | PPI |
| MS.gene045180 | MS.gene31056 | PPI |
| MS.gene52173 | MS.gene31056 | PPI |
| MS.gene023799 | MS.gene31056 | PPI |
| MS.gene42236 | MS.gene31056 | PPI |
| MS.gene73008 | MS.gene31056 | PPI |
| MS.gene27648 | MS.gene31056 | PPI |
| MS.gene28147 | MS.gene31056 | PPI |
| MS.gene041557 | MS.gene31056 | PPI |
| MS.gene31056 | MS.gene030719 | PPI |
| MS.gene030719 | MS.gene31056 | PPI |
| MS.gene81197 | MS.gene31056 | PPI |
| MS.gene035331 | MS.gene31056 | PPI |
| MS.gene036487 | MS.gene31056 | PPI |
| MS.gene047734 | MS.gene31056 | PPI |
| MS.gene58173 | MS.gene31056 | PPI |
| MS.gene042025 | MS.gene31056 | PPI |
| MS.gene010453 | MS.gene31056 | PPI |
| MS.gene31056 | MS.gene067072 | PPI |
| MS.gene013401 | MS.gene31056 | PPI |
| MS.gene31039 | MS.gene31056 | PPI |
| MS.gene75537 | MS.gene31056 | PPI |
| MS.gene59319 | MS.gene31056 | PPI |
| MS.gene06501 | MS.gene31056 | PPI |
| MS.gene049376 | MS.gene31056 | PPI |
| MS.gene42910 | MS.gene31056 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31056.t1 | MTR_3g094570 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 4.34e-167 | 460 |
| MS.gene31056.t1 | MTR_3g094860 | 97.425 | 233 | 6 | 0 | 1 | 233 | 1 | 233 | 6.67e-165 | 454 |
| MS.gene31056.t1 | MTR_5g098090 | 84.188 | 234 | 36 | 1 | 1 | 233 | 1 | 234 | 2.58e-140 | 392 |
| MS.gene31056.t1 | MTR_8g091910 | 79.915 | 234 | 31 | 2 | 1 | 233 | 1 | 219 | 4.92e-130 | 366 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31056.t1 | AT1G74060 | 79.828 | 233 | 47 | 0 | 1 | 233 | 1 | 233 | 2.62e-122 | 347 |
| MS.gene31056.t1 | AT1G74050 | 79.828 | 233 | 47 | 0 | 1 | 233 | 1 | 233 | 5.57e-122 | 346 |
| MS.gene31056.t1 | AT1G18540 | 77.682 | 233 | 52 | 0 | 1 | 233 | 1 | 233 | 1.91e-114 | 327 |
Find 76 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCCGGAAGATTTA+AGG | 0.144333 | 3.3:-78574191 | MS.gene31056:CDS |
| CCGATACCCCTGATCAATTC+AGG | 0.224276 | 3.3:+78575874 | None:intergenic |
| TTTCTCAAGCAGCTTCCTTC+TGG | 0.237735 | 3.3:-78574154 | MS.gene31056:CDS |
| TTTGATCATCCTTCTTCTCT+TGG | 0.241206 | 3.3:+78572557 | None:intergenic |
| TCAGGTCCATTCAAGATTAA+TGG | 0.243591 | 3.3:-78572858 | MS.gene31056:intron |
| TTGATCATCCTTCTTCTCTT+GGG | 0.285928 | 3.3:+78572558 | None:intergenic |
| TACTCTTGCAGTTCTTTGCT+TGG | 0.312751 | 3.3:+78575906 | None:intergenic |
| TCTGGACTTCTTCTCGTTAC+CGG | 0.334203 | 3.3:-78574136 | MS.gene31056:intron |
| TGTACCACAAGCGTGGGCTC+TGG | 0.340160 | 3.3:-78575831 | MS.gene31056:CDS |
| ACCACCGTGCTTGGCTTTGA+TGG | 0.340487 | 3.3:+78575807 | None:intergenic |
| TCTCTTTCCCTTAAATCTTC+CGG | 0.346788 | 3.3:+78574183 | None:intergenic |
| CCCATTGAGACGTGTGAATC+AGG | 0.352065 | 3.3:-78572832 | MS.gene31056:CDS |
| AACCTGAGCTTAGTGGGCTT+TGG | 0.360630 | 3.3:+78575676 | None:intergenic |
| CTTCTTGCCGGAAGATTTAA+GGG | 0.369942 | 3.3:-78574190 | MS.gene31056:CDS |
| CAAGTTCTTTGAGGCAGATA+AGG | 0.378267 | 3.3:-78572697 | MS.gene31056:CDS |
| ACTCTTGCAGTTCTTTGCTT+GGG | 0.381464 | 3.3:+78575907 | None:intergenic |
| TGGCTTCACACCTGCCTTCA+AGG | 0.382880 | 3.3:+78572459 | None:intergenic |
| TTCAGGGCTTCCATTACTCC+TGG | 0.384116 | 3.3:-78574226 | MS.gene31056:intron |
| AGAAGAATCAACACTGTTCC+AGG | 0.392446 | 3.3:+78574208 | None:intergenic |
| GCCGTAACCCTGAATTGATC+AGG | 0.416781 | 3.3:-78575882 | MS.gene31056:CDS |
| CCAAGGTAAGTCTTCAAGTC+TGG | 0.429639 | 3.3:+78572493 | None:intergenic |
| AACCGAAGAAATGTCTACTT+TGG | 0.432126 | 3.3:+78572788 | None:intergenic |
| ACAGTGTTGATTCTTCTTGC+CGG | 0.435433 | 3.3:-78574202 | MS.gene31056:CDS |
| GGCTTCTTCACATCGTCGGC+GGG | 0.438115 | 3.3:+78575718 | None:intergenic |
| CCCTGATCAATTCAGGGTTA+CGG | 0.450408 | 3.3:+78575881 | None:intergenic |
| GTGAATCAGGCATATGTTAT+CGG | 0.451583 | 3.3:-78572819 | MS.gene31056:CDS |
| GCCTGATTCACACGTCTCAA+TGG | 0.452522 | 3.3:+78572831 | None:intergenic |
| CAAGTCTGGAACACTGTCAA+TGG | 0.454071 | 3.3:+78572507 | None:intergenic |
| CGTCGCTAAGGCTGCAGCTC+CGG | 0.457093 | 3.3:-78575764 | MS.gene31056:CDS |
| GTACCACAAGCGTGGGCTCT+GGG | 0.465574 | 3.3:-78575830 | MS.gene31056:CDS |
| CGATACCCCTGATCAATTCA+GGG | 0.465988 | 3.3:+78575875 | None:intergenic |
| TGATCATCCTTCTTCTCTTG+GGG | 0.470714 | 3.3:+78572559 | None:intergenic |
| AACTTAGGTGGCTTCTCGAC+CGG | 0.474725 | 3.3:+78575745 | None:intergenic |
| AACCAAAGTAGACATTTCTT+CGG | 0.476825 | 3.3:-78572790 | MS.gene31056:CDS |
| GAGCCCACGCTTGTGGTACA+TGG | 0.479514 | 3.3:+78575834 | None:intergenic |
| GGGACTCCATTAATCTTGAA+TGG | 0.483082 | 3.3:+78572852 | None:intergenic |
| TGAAGACTTACCTTGGTGCC+AGG | 0.485144 | 3.3:-78572486 | MS.gene31056:CDS |
| AGGGAAAGAACCACCGTGCT+TGG | 0.486637 | 3.3:+78575798 | None:intergenic |
| CAACACTGTTCCAGGAGTAA+TGG | 0.486929 | 3.3:+78574216 | None:intergenic |
| CCTGATTCACACGTCTCAAT+GGG | 0.486965 | 3.3:+78572832 | None:intergenic |
| CCTGAATTGATCAGGGGTAT+CGG | 0.492309 | 3.3:-78575874 | MS.gene31056:CDS |
| GGGAGAGAGCAAGTTCTTTG+AGG | 0.509347 | 3.3:-78572706 | MS.gene31056:CDS |
| ACCTGCCTTCAAGGAAAACC+TGG | 0.516282 | 3.3:+78572468 | None:intergenic |
| GGTGACGAACCTGAGCTTAG+TGG | 0.535903 | 3.3:+78575669 | None:intergenic |
| GATCAAAAGACTGTTGATGC+TGG | 0.542508 | 3.3:-78572541 | MS.gene31056:CDS |
| TGGCCCAGAGCCCACGCTTG+TGG | 0.545998 | 3.3:+78575827 | None:intergenic |
| GATCATCCTTCTTCTCTTGG+GGG | 0.548827 | 3.3:+78572560 | None:intergenic |
| TCGTCGGCGGGGTAAAACTT+AGG | 0.552424 | 3.3:+78575730 | None:intergenic |
| GCTTTGGCTTGTGCTTGTTG+CGG | 0.553049 | 3.3:+78575692 | None:intergenic |
| CCGTAACCCTGAATTGATCA+GGG | 0.555623 | 3.3:-78575881 | MS.gene31056:CDS |
| AGCCAAAGCCCACTAAGCTC+AGG | 0.559866 | 3.3:-78575678 | MS.gene31056:intron |
| CCAGACTTGAAGACTTACCT+TGG | 0.561891 | 3.3:-78572493 | MS.gene31056:CDS |
| TCGTCACGATCCCGTCGCTA+AGG | 0.562513 | 3.3:-78575776 | MS.gene31056:CDS |
| GGAGCTGCAGCCTTAGCGAC+GGG | 0.567898 | 3.3:+78575766 | None:intergenic |
| GGGGTATCGGAAAATACTCT+AGG | 0.568283 | 3.3:-78575861 | MS.gene31056:CDS |
| TGGCTTCTTCACATCGTCGG+CGG | 0.569896 | 3.3:+78575717 | None:intergenic |
| GTGACGAACCTGAGCTTAGT+GGG | 0.585384 | 3.3:+78575670 | None:intergenic |
| GTTCTTTGAGGCAGATAAGG+AGG | 0.586225 | 3.3:-78572694 | MS.gene31056:intron |
| CGGAGCTGCAGCCTTAGCGA+CGG | 0.590166 | 3.3:+78575765 | None:intergenic |
| GGCTTGTGCTTGTTGCGGAG+TGG | 0.594085 | 3.3:+78575697 | None:intergenic |
| TGATGACAAGTACTTCTCAA+AGG | 0.595456 | 3.3:-78572751 | MS.gene31056:CDS |
| CTCTAGAAGACCAACTCGTG+TGG | 0.601883 | 3.3:+78572439 | None:intergenic |
| GAGTGGCTTCTTCACATCGT+CGG | 0.602023 | 3.3:+78575714 | None:intergenic |
| TGGGCCATCAAAGCCAAGCA+CGG | 0.612265 | 3.3:-78575811 | MS.gene31056:CDS |
| CTGCCATGTACCACAAGCGT+GGG | 0.619476 | 3.3:-78575837 | MS.gene31056:CDS |
| GTAACGAGAAGAAGTCCAGA+AGG | 0.620622 | 3.3:+78574139 | None:intergenic |
| CACACGAGTTGGTCTTCTAG+AGG | 0.630211 | 3.3:-78572438 | None:intergenic |
| AGGTGTGAAGCCACACGAGT+TGG | 0.631048 | 3.3:-78572449 | MS.gene31056:CDS |
| TTAGCGACGGGATCGTGACG+AGG | 0.633658 | 3.3:+78575778 | None:intergenic |
| GCTTCTTCACATCGTCGGCG+GGG | 0.637997 | 3.3:+78575719 | None:intergenic |
| TCTGCCATGTACCACAAGCG+TGG | 0.639753 | 3.3:-78575838 | MS.gene31056:CDS |
| TCAAGGAAAACCTGGCACCA+AGG | 0.644709 | 3.3:+78572476 | None:intergenic |
| TCGGCGGGGTAAAACTTAGG+TGG | 0.654802 | 3.3:+78575733 | None:intergenic |
| TAGCGACGGGATCGTGACGA+GGG | 0.688534 | 3.3:+78575779 | None:intergenic |
| CGTAACCCTGAATTGATCAG+GGG | 0.696777 | 3.3:-78575880 | MS.gene31056:CDS |
| GCCATCAAAGCCAAGCACGG+TGG | 0.747137 | 3.3:-78575808 | MS.gene31056:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATACAAATTTTCATA+GGG | - | chr3.3:78573150-78573169 | MS.gene31056:intron | 10.0% |
| !! | ATGATAAAATTTATGATGTT+AGG | - | chr3.3:78573613-78573632 | MS.gene31056:intron | 15.0% |
| !! | TATTGTTAATTATGATATGT+TGG | - | chr3.3:78572857-78572876 | MS.gene31056:CDS | 15.0% |
| !!! | GAAAATATACAAATTTTCAT+AGG | - | chr3.3:78573149-78573168 | MS.gene31056:intron | 15.0% |
| !!! | TAAATCTTTTTGAATAAAGT+TGG | - | chr3.3:78572726-78572745 | MS.gene31056:CDS | 15.0% |
| !! | AAGAAAACAAGAAATAAGAA+AGG | - | chr3.3:78575206-78575225 | MS.gene31056:intron | 20.0% |
| !! | AGAAAACAAGAAATAAGAAA+GGG | - | chr3.3:78575207-78575226 | MS.gene31056:intron | 20.0% |
| !! | ATCAAATCTAAAGGTTTAAA+TGG | + | chr3.3:78574492-78574511 | None:intergenic | 20.0% |
| !! | TAAACCAAAAAAACAATTAC+CGG | + | chr3.3:78574240-78574259 | None:intergenic | 20.0% |
| !! | TAATTTATTCTTTCTCAAGA+AGG | - | chr3.3:78574769-78574788 | MS.gene31056:intron | 20.0% |
| !! | TGAATGATTTATATAGTTCA+TGG | - | chr3.3:78574098-78574117 | MS.gene31056:intron | 20.0% |
| !! | TTATCAATAGAAATGAACAA+CGG | + | chr3.3:78572709-78572728 | None:intergenic | 20.0% |
| !!! | AAATTTGAGATTTGATTCAT+TGG | - | chr3.3:78573096-78573115 | MS.gene31056:intron | 20.0% |
| !!! | AATTTTGTTAGTGTCTATAT+TGG | - | chr3.3:78574046-78574065 | MS.gene31056:intron | 20.0% |
| !!! | CACAAATACGTAAATAATTT+TGG | + | chr3.3:78574366-78574385 | None:intergenic | 20.0% |
| !!! | GCTATTTGTTTATTTTGTTT+TGG | - | chr3.3:78572821-78572840 | MS.gene31056:CDS | 20.0% |
| !!! | GTAATTGTTTTTTTGGTTTA+AGG | - | chr3.3:78574240-78574259 | MS.gene31056:intron | 20.0% |
| !!! | TGGAGATATACATATAATTT+TGG | - | chr3.3:78574826-78574845 | MS.gene31056:intron | 20.0% |
| !!! | TGTATTTTGAAGTTCAAATA+TGG | - | chr3.3:78572953-78572972 | MS.gene31056:intron | 20.0% |
| !!! | TTTAGACATTATTTTGAAAC+TGG | + | chr3.3:78575064-78575083 | None:intergenic | 20.0% |
| ! | AAAATTGCTTCTTATACATG+TGG | - | chr3.3:78574746-78574765 | MS.gene31056:intron | 25.0% |
| ! | AACAACAACATTGTAAAGAT+CGG | + | chr3.3:78575751-78575770 | None:intergenic | 25.0% |
| ! | AATTAAGTATCAGGAAAACA+TGG | - | chr3.3:78573642-78573661 | MS.gene31056:intron | 25.0% |
| ! | ACAATAGATACTGTCATATT+TGG | - | chr3.3:78574465-78574484 | MS.gene31056:intron | 25.0% |
| ! | AGGAATTGAAATTAAGTATC+AGG | - | chr3.3:78573633-78573652 | MS.gene31056:intron | 25.0% |
| ! | ATTAAGTATCAGGAAAACAT+GGG | - | chr3.3:78573643-78573662 | MS.gene31056:intron | 25.0% |
| ! | GTACAACAAGCAAATATATA+TGG | + | chr3.3:78574309-78574328 | None:intergenic | 25.0% |
| ! | GTGAATATATGGAAAATATG+CGG | - | chr3.3:78573249-78573268 | MS.gene31056:intron | 25.0% |
| ! | GTTAATTATGATATGTTGGA+CGG | - | chr3.3:78572861-78572880 | MS.gene31056:intron | 25.0% |
| ! | TGAATATATGGAAAATATGC+GGG | - | chr3.3:78573250-78573269 | MS.gene31056:intron | 25.0% |
| ! | TGTACTACAATCAAATCTAA+AGG | + | chr3.3:78574501-78574520 | None:intergenic | 25.0% |
| ! | TTTATTAACATGTGTTGAGT+GGG | - | chr3.3:78573677-78573696 | MS.gene31056:intron | 25.0% |
| ! | TTTGAATGTTTACACACTTA+TGG | + | chr3.3:78574715-78574734 | None:intergenic | 25.0% |
| !! | AAGTTCAAATATGGATTTTG+GGG | - | chr3.3:78572962-78572981 | MS.gene31056:intron | 25.0% |
| !! | AATTAAGTTTTTCACCTTTG+AGG | + | chr3.3:78575343-78575362 | None:intergenic | 25.0% |
| !! | ATACAAATTTTCATAGGGTT+AGG | - | chr3.3:78573155-78573174 | MS.gene31056:intron | 25.0% |
| !! | CATGAATCTACATTACATTT+TGG | - | chr3.3:78574945-78574964 | MS.gene31056:intron | 25.0% |
| !! | GAAGTTCAAATATGGATTTT+GGG | - | chr3.3:78572961-78572980 | MS.gene31056:intron | 25.0% |
| !! | TACAAATTTTCATAGGGTTA+GGG | - | chr3.3:78573156-78573175 | MS.gene31056:intron | 25.0% |
| !! | TGAAGTTCAAATATGGATTT+TGG | - | chr3.3:78572960-78572979 | MS.gene31056:intron | 25.0% |
| !! | TTTTATTAACATGTGTTGAG+TGG | - | chr3.3:78573676-78573695 | MS.gene31056:intron | 25.0% |
| !!! | ATAGACATTTTGAAGTTCTT+TGG | - | chr3.3:78573908-78573927 | MS.gene31056:intron | 25.0% |
| !!! | GAAATGGATTTTGTGAATAA+AGG | - | chr3.3:78572883-78572902 | MS.gene31056:intron | 25.0% |
| !!! | TGAGTTGTTTTAGAATTCTT+GGG | - | chr3.3:78573029-78573048 | MS.gene31056:intron | 25.0% |
| !!! | TTGAGTTGTTTTAGAATTCT+TGG | - | chr3.3:78573028-78573047 | MS.gene31056:intron | 25.0% |
| !!! | TTTAAATGCTGTTTCGTTTT+TGG | - | chr3.3:78573577-78573596 | MS.gene31056:intron | 25.0% |
| AAAGGGTGAAAAAGCAAATA+TGG | - | chr3.3:78575224-78575243 | MS.gene31056:intron | 30.0% | |
| AAATATGGGGGTTAATGATA+AGG | - | chr3.3:78575239-78575258 | MS.gene31056:intron | 30.0% | |
| AACCAAAGTAGACATTTCTT+CGG | - | chr3.3:78575564-78575583 | MS.gene31056:intron | 30.0% | |
| AACTTCAAAATACAGTTAGC+AGG | + | chr3.3:78572947-78572966 | None:intergenic | 30.0% | |
| AAGGGTGAAAAAGCAAATAT+GGG | - | chr3.3:78575225-78575244 | MS.gene31056:intron | 30.0% | |
| AATGTAGCTAAGGATGATTA+CGG | + | chr3.3:78574857-78574876 | None:intergenic | 30.0% | |
| ACTTCAAAATACAGTTAGCA+GGG | + | chr3.3:78572946-78572965 | None:intergenic | 30.0% | |
| AGTAAATGTGAATGTAGCTA+AGG | + | chr3.3:78574867-78574886 | None:intergenic | 30.0% | |
| CAAGCTAAACAACATCAAAA+AGG | + | chr3.3:78573454-78573473 | None:intergenic | 30.0% | |
| CGAATCTTTCTGTGAATATA+TGG | - | chr3.3:78573238-78573257 | MS.gene31056:intron | 30.0% | |
| GAAGAAAAAGATAGTCCTAT+AGG | - | chr3.3:78574524-78574543 | MS.gene31056:intron | 30.0% | |
| GAGAATGAACAAATGAAGAT+TGG | + | chr3.3:78575470-78575489 | None:intergenic | 30.0% | |
| GATTGAAACTAAATCAACCT+TGG | - | chr3.3:78574385-78574404 | MS.gene31056:intron | 30.0% | |
| GTAGATTCATGATACAAGAA+GGG | + | chr3.3:78574936-78574955 | None:intergenic | 30.0% | |
| TAAACCAATAGAGTGTACTA+AGG | + | chr3.3:78573533-78573552 | None:intergenic | 30.0% | |
| TAATGATAAGGAAAGTAGGT+AGG | - | chr3.3:78575251-78575270 | MS.gene31056:intron | 30.0% | |
| TACGAATTGAATATTACCAC+CGG | - | chr3.3:78572750-78572769 | MS.gene31056:CDS | 30.0% | |
| TAGGAATTGTATTCGTGTTT+GGG | - | chr3.3:78573002-78573021 | MS.gene31056:intron | 30.0% | |
| TATCAACATTATGGATATGC+CGG | - | chr3.3:78573815-78573834 | MS.gene31056:intron | 30.0% | |
| TGATATTAAACACGCACATA+GGG | - | chr3.3:78573193-78573212 | MS.gene31056:intron | 30.0% | |
| TGCATCATCAATATAACTCA+TGG | + | chr3.3:78574331-78574350 | None:intergenic | 30.0% | |
| TGTAGATTCATGATACAAGA+AGG | + | chr3.3:78574937-78574956 | None:intergenic | 30.0% | |
| TTAGGAATTGTATTCGTGTT+TGG | - | chr3.3:78573001-78573020 | MS.gene31056:intron | 30.0% | |
| TTATTAACATGTGTTGAGTG+GGG | - | chr3.3:78573678-78573697 | MS.gene31056:intron | 30.0% | |
| TTCATGTTATTACCTGAGAT+TGG | - | chr3.3:78574273-78574292 | MS.gene31056:intron | 30.0% | |
| ! | AAGTAATGACTTGTGAGATA+TGG | - | chr3.3:78574442-78574461 | MS.gene31056:intron | 30.0% |
| ! | GGTTTGATTTATGTGTGATT+AGG | - | chr3.3:78572983-78573002 | MS.gene31056:intron | 30.0% |
| ! | GTTTTCTTACATTACAGCTT+CGG | + | chr3.3:78575194-78575213 | None:intergenic | 30.0% |
| ! | TGGATTTTGTGAATAAAGGA+TGG | - | chr3.3:78572887-78572906 | MS.gene31056:intron | 30.0% |
| ! | TTTTCTTACATTACAGCTTC+GGG | + | chr3.3:78575193-78575212 | None:intergenic | 30.0% |
| !! | TTAGTACACTCTATTGGTTT+AGG | - | chr3.3:78573532-78573551 | MS.gene31056:intron | 30.0% |
| !!! | AGTTCATGGTTTTGTTTTCA+GGG | - | chr3.3:78574112-78574131 | MS.gene31056:intron | 30.0% |
| !!! | GAGCACTTTTTTATCCTAAA+AGG | + | chr3.3:78575775-78575794 | None:intergenic | 30.0% |
| !!! | GTTACCGGTAATTGTTTTTT+TGG | - | chr3.3:78574233-78574252 | MS.gene31056:intron | 30.0% |
| !!! | TAGTTCATGGTTTTGTTTTC+AGG | - | chr3.3:78574111-78574130 | MS.gene31056:intron | 30.0% |
| AAAGTTGAACAACAACCCAA+TGG | + | chr3.3:78575300-78575319 | None:intergenic | 35.0% | |
| AACCGAAGAAATGTCTACTT+TGG | + | chr3.3:78575569-78575588 | None:intergenic | 35.0% | |
| AATAGTCTGTGTCTTGATTG+TGG | - | chr3.3:78573502-78573521 | MS.gene31056:intron | 35.0% | |
| AGGGTGAAAAAGCAAATATG+GGG | - | chr3.3:78575226-78575245 | MS.gene31056:intron | 35.0% | |
| AGTAAGGGATCTCAATAGTT+GGG | - | chr3.3:78575005-78575024 | MS.gene31056:intron | 35.0% | |
| ATCCCAGAAAAAGACTAAGA+AGG | - | chr3.3:78575627-78575646 | MS.gene31056:intron | 35.0% | |
| ATTAATCTTGAATGGACCTG+AGG | + | chr3.3:78575497-78575516 | None:intergenic | 35.0% | |
| CAACTCACTTTCTAACCTAT+AGG | + | chr3.3:78574542-78574561 | None:intergenic | 35.0% | |
| CTCAAAGAGACAAAGAATGA+TGG | - | chr3.3:78573751-78573770 | MS.gene31056:intron | 35.0% | |
| CTTCTGCTTCTTAGTAAACA+TGG | - | chr3.3:78574806-78574825 | MS.gene31056:intron | 35.0% | |
| GAGACTAAAGAAGGTCTTTA+AGG | + | chr3.3:78575434-78575453 | None:intergenic | 35.0% | |
| GGAACATAAAATACTGACCA+AGG | + | chr3.3:78574405-78574424 | None:intergenic | 35.0% | |
| GGGTTAATGATAAGGAAAGT+AGG | - | chr3.3:78575247-78575266 | MS.gene31056:intron | 35.0% | |
| GTGAATAAAGGATGGAGAAA+CGG | - | chr3.3:78572895-78572914 | MS.gene31056:intron | 35.0% | |
| GTGAATCAGGCATATGTTAT+CGG | - | chr3.3:78575535-78575554 | MS.gene31056:intron | 35.0% | |
| GTGATATTAAACACGCACAT+AGG | - | chr3.3:78573192-78573211 | MS.gene31056:intron | 35.0% | |
| TACAAGAAGGGTAGATGAAA+TGG | + | chr3.3:78574924-78574943 | None:intergenic | 35.0% | |
| TATGATATGTTGGACGGAAA+TGG | - | chr3.3:78572867-78572886 | MS.gene31056:intron | 35.0% | |
| TATTAACATGTGTTGAGTGG+GGG | - | chr3.3:78573679-78573698 | MS.gene31056:intron | 35.0% | |
| TCAACTTTGACAAGCAAAAC+AGG | - | chr3.3:78575312-78575331 | MS.gene31056:intron | 35.0% | |
| TCAAGACACAGACTATTAGT+TGG | + | chr3.3:78573499-78573518 | None:intergenic | 35.0% | |
| TCAGGTCCATTCAAGATTAA+TGG | - | chr3.3:78575496-78575515 | MS.gene31056:intron | 35.0% | |
| TCCCAGAAAAAGACTAAGAA+GGG | - | chr3.3:78575628-78575647 | MS.gene31056:intron | 35.0% | |
| TCTATGTCTGTGCAGTTAAA+CGG | + | chr3.3:78573893-78573912 | None:intergenic | 35.0% | |
| TCTCTTTCCCTTAAATCTTC+CGG | + | chr3.3:78574174-78574193 | None:intergenic | 35.0% | |
| TGAATAAAGGATGGAGAAAC+GGG | - | chr3.3:78572896-78572915 | MS.gene31056:intron | 35.0% | |
| TGATGACAAGTACTTCTCAA+AGG | - | chr3.3:78575603-78575622 | MS.gene31056:intron | 35.0% | |
| TGTGAATCTCAGTCATTAGT+TGG | + | chr3.3:78575110-78575129 | None:intergenic | 35.0% | |
| TTAAGCCACAATGAGTTGTT+CGG | + | chr3.3:78575037-78575056 | None:intergenic | 35.0% | |
| TTAGTTGGATGAAGATCAGA+TGG | + | chr3.3:78575095-78575114 | None:intergenic | 35.0% | |
| TTGATCATCCTTCTTCTCTT+GGG | + | chr3.3:78575799-78575818 | None:intergenic | 35.0% | |
| TTGTAAAGATCGGCATACAA+AGG | + | chr3.3:78575741-78575760 | None:intergenic | 35.0% | |
| TTTCTTACATTACAGCTTCG+GGG | + | chr3.3:78575192-78575211 | None:intergenic | 35.0% | |
| TTTGATCATCCTTCTTCTCT+TGG | + | chr3.3:78575800-78575819 | None:intergenic | 35.0% | |
| ! | AAAGTATGGAAGTATGGTGT+AGG | - | chr3.3:78572919-78572938 | MS.gene31056:intron | 35.0% |
| ! | ATCAAACTTATCGTTCTGAG+CGG | - | chr3.3:78575152-78575171 | MS.gene31056:intron | 35.0% |
| ! | GGTCAGTATTTTATGTTCCA+GGG | - | chr3.3:78574406-78574425 | MS.gene31056:intron | 35.0% |
| ! | TAGATACACTTTGACTTTGC+CGG | + | chr3.3:78572772-78572791 | None:intergenic | 35.0% |
| ! | TGGTCAGTATTTTATGTTCC+AGG | - | chr3.3:78574405-78574424 | MS.gene31056:intron | 35.0% |
| !! | CAATGTTGTTGTTGCCTTTT+AGG | - | chr3.3:78575758-78575777 | MS.gene31056:CDS | 35.0% |
| !! | TCCCTTCTTAGTCTTTTTCT+GGG | + | chr3.3:78575632-78575651 | None:intergenic | 35.0% |
| !! | TGTGTTAGGTTGAAAAGTGA+AGG | - | chr3.3:78574589-78574608 | MS.gene31056:intron | 35.0% |
| !!! | ATATTTTTTTTGGGTACCGG+GGG | - | chr3.3:78573702-78573721 | MS.gene31056:intron | 35.0% |
| !!! | GAGTGGGGGATATTTTTTTT+GGG | - | chr3.3:78573693-78573712 | MS.gene31056:intron | 35.0% |
| !!! | GATATTTTTTTTGGGTACCG+GGG | - | chr3.3:78573701-78573720 | MS.gene31056:intron | 35.0% |
| !!! | GGATATTTTTTTTGGGTACC+GGG | - | chr3.3:78573700-78573719 | MS.gene31056:intron | 35.0% |
| !!! | GGGATATTTTTTTTGGGTAC+CGG | - | chr3.3:78573699-78573718 | MS.gene31056:intron | 35.0% |
| !!! | TGAGTGGGGGATATTTTTTT+TGG | - | chr3.3:78573692-78573711 | MS.gene31056:intron | 35.0% |
| ACAACAATGCAACAGCCATT+GGG | - | chr3.3:78575282-78575301 | MS.gene31056:intron | 40.0% | |
| ACAGGCAGCTATCAACATTA+TGG | - | chr3.3:78573806-78573825 | MS.gene31056:intron | 40.0% | |
| ACTCTTGCAGTTCTTTGCTT+GGG | + | chr3.3:78572450-78572469 | None:intergenic | 40.0% | |
| ACTTGTCTAACTGATATCCC+TGG | + | chr3.3:78574426-78574445 | None:intergenic | 40.0% | |
| AGAAGAATCAACACTGTTCC+AGG | + | chr3.3:78574149-78574168 | None:intergenic | 40.0% | |
| AGATGAGAGGAGACTAAAGA+AGG | + | chr3.3:78575443-78575462 | None:intergenic | 40.0% | |
| AGGAAAACATGCAGTCAGTA+AGG | - | chr3.3:78574989-78575008 | MS.gene31056:intron | 40.0% | |
| AGTATCAGGAAAACATGGGT+TGG | - | chr3.3:78573647-78573666 | MS.gene31056:intron | 40.0% | |
| CAAAACAGGACAAACCTCAA+AGG | - | chr3.3:78575326-78575345 | MS.gene31056:intron | 40.0% | |
| CAGTAAGGGATCTCAATAGT+TGG | - | chr3.3:78575004-78575023 | MS.gene31056:intron | 40.0% | |
| CCAATAGAGTGTACTAAGGA+TGG | + | chr3.3:78573529-78573548 | None:intergenic | 40.0% | |
| CCATCCTTAGTACACTCTAT+TGG | - | chr3.3:78573526-78573545 | MS.gene31056:intron | 40.0% | |
| CTTCTTGCCGGAAGATTTAA+GGG | - | chr3.3:78574164-78574183 | MS.gene31056:CDS | 40.0% | |
| GATCAAAAGACTGTTGATGC+TGG | - | chr3.3:78575813-78575832 | MS.gene31056:CDS | 40.0% | |
| GCTCAGAACGATAAGTTTGA+TGG | + | chr3.3:78575153-78575172 | None:intergenic | 40.0% | |
| GGAAAACATGCAGTCAGTAA+GGG | - | chr3.3:78574990-78575009 | MS.gene31056:intron | 40.0% | |
| GGGACTCCATTAATCTTGAA+TGG | + | chr3.3:78575505-78575524 | None:intergenic | 40.0% | |
| GGGTGAAAAAGCAAATATGG+GGG | - | chr3.3:78575227-78575246 | MS.gene31056:intron | 40.0% | |
| GGTTACATACAACCAATCTC+AGG | + | chr3.3:78574288-78574307 | None:intergenic | 40.0% | |
| GTTAGAAAGTGAGTTGCTGT+TGG | - | chr3.3:78574546-78574565 | MS.gene31056:intron | 40.0% | |
| GTTCGGTAAATCACTGTGTT+AGG | - | chr3.3:78574575-78574594 | MS.gene31056:intron | 40.0% | |
| TACTCTTGCAGTTCTTTGCT+TGG | + | chr3.3:78572451-78572470 | None:intergenic | 40.0% | |
| TCTTCTTGCCGGAAGATTTA+AGG | - | chr3.3:78574163-78574182 | MS.gene31056:CDS | 40.0% | |
| TGATCATCCTTCTTCTCTTG+GGG | + | chr3.3:78575798-78575817 | None:intergenic | 40.0% | |
| TGCTTTCGTCCATGTGTTTA+CGG | - | chr3.3:78573293-78573312 | MS.gene31056:intron | 40.0% | |
| TTGTTCATTCTCACTTCCTC+AGG | - | chr3.3:78575478-78575497 | MS.gene31056:intron | 40.0% | |
| ! | AACGGGAAAGTATGGAAGTA+TGG | - | chr3.3:78572913-78572932 | MS.gene31056:intron | 40.0% |
| ! | CATGTTTTCCTTGACTGTTG+CGG | + | chr3.3:78574980-78574999 | None:intergenic | 40.0% |
| ! | TTTTCCTGTTGTTCGTCTCA+GGG | - | chr3.3:78573862-78573881 | MS.gene31056:intron | 40.0% |
| !! | ACAGTGTTGATTCTTCTTGC+CGG | - | chr3.3:78574152-78574171 | MS.gene31056:CDS | 40.0% |
| !! | AGCTTTGTTAGTCTGGTGTT+AGG | - | chr3.3:78573378-78573397 | MS.gene31056:intron | 40.0% |
| !! | CAAGTTCTTTGAGGCAGATA+AGG | - | chr3.3:78575657-78575676 | MS.gene31056:intron | 40.0% |
| !! | CTCCCTTCTTAGTCTTTTTC+TGG | + | chr3.3:78575633-78575652 | None:intergenic | 40.0% |
| !! | CTTTCTGAGCTTTGTTAGTC+TGG | - | chr3.3:78573371-78573390 | MS.gene31056:intron | 40.0% |
| !! | GTACACTCTATTGGTTTAGG+TGG | - | chr3.3:78573535-78573554 | MS.gene31056:intron | 40.0% |
| !! | TTTAGCTTGTGTGCTCTGTT+TGG | - | chr3.3:78573465-78573484 | MS.gene31056:intron | 40.0% |
| !!! | TATTTTTTTTGGGTACCGGG+GGG | - | chr3.3:78573703-78573722 | MS.gene31056:intron | 40.0% |
| AACAACAGGAAAAGGAGGAG+GGG | + | chr3.3:78573855-78573874 | None:intergenic | 45.0% | |
| AGACGAACAACAGGAAAAGG+AGG | + | chr3.3:78573860-78573879 | None:intergenic | 45.0% | |
| CAACACTGTTCCAGGAGTAA+TGG | + | chr3.3:78574141-78574160 | None:intergenic | 45.0% | |
| CAACATTATGGATATGCCGG+TGG | - | chr3.3:78573818-78573837 | MS.gene31056:intron | 45.0% | |
| CACAACAATGCAACAGCCAT+TGG | - | chr3.3:78575281-78575300 | MS.gene31056:intron | 45.0% | |
| CCAAGGTAAGTCTTCAAGTC+TGG | + | chr3.3:78575864-78575883 | None:intergenic | 45.0% | |
| CCAGACTTGAAGACTTACCT+TGG | - | chr3.3:78575861-78575880 | MS.gene31056:CDS | 45.0% | |
| CCCTGATCAATTCAGGGTTA+CGG | + | chr3.3:78572476-78572495 | None:intergenic | 45.0% | |
| CCGTAACCCTGAATTGATCA+GGG | - | chr3.3:78572473-78572492 | MS.gene31056:CDS | 45.0% | |
| CCTGATTCACACGTCTCAAT+GGG | + | chr3.3:78575525-78575544 | None:intergenic | 45.0% | |
| CGATACCCCTGATCAATTCA+GGG | + | chr3.3:78572482-78572501 | None:intergenic | 45.0% | |
| CGTAACCCTGAATTGATCAG+GGG | - | chr3.3:78572474-78572493 | MS.gene31056:CDS | 45.0% | |
| CTCACTGCGAAGTATGGATT+GGG | + | chr3.3:78573779-78573798 | None:intergenic | 45.0% | |
| CTGAGACGAACAACAGGAAA+AGG | + | chr3.3:78573863-78573882 | None:intergenic | 45.0% | |
| GAAAAACAACACGAGTGCGA+CGG | + | chr3.3:78573346-78573365 | None:intergenic | 45.0% | |
| GAACAACAGGAAAAGGAGGA+GGG | + | chr3.3:78573856-78573875 | None:intergenic | 45.0% | |
| GAAGACCGAACAACTCATTG+TGG | - | chr3.3:78575029-78575048 | MS.gene31056:intron | 45.0% | |
| GATCATCCTTCTTCTCTTGG+GGG | + | chr3.3:78575797-78575816 | None:intergenic | 45.0% | |
| GATGGAGAAACGGGAAAGTA+TGG | - | chr3.3:78572905-78572924 | MS.gene31056:intron | 45.0% | |
| GGTTCAGTCAAGTACGATGT+TGG | - | chr3.3:78573728-78573747 | MS.gene31056:intron | 45.0% | |
| GTAAACACATGGACGAAAGC+AGG | + | chr3.3:78573294-78573313 | None:intergenic | 45.0% | |
| GTAACGAGAAGAAGTCCAGA+AGG | + | chr3.3:78574218-78574237 | None:intergenic | 45.0% | |
| TCTGGACTTCTTCTCGTTAC+CGG | - | chr3.3:78574218-78574237 | MS.gene31056:CDS | 45.0% | |
| TTCGTCCATGTGTTTACGGT+CGG | - | chr3.3:78573297-78573316 | MS.gene31056:intron | 45.0% | |
| TTTCCTGTTGTTCGTCTCAG+GGG | - | chr3.3:78573863-78573882 | MS.gene31056:intron | 45.0% | |
| TTTCTCAAGCAGCTTCCTTC+TGG | - | chr3.3:78574200-78574219 | MS.gene31056:CDS | 45.0% | |
| ! | AAAGTGAGTTGCTGTTGGAG+GGG | - | chr3.3:78574551-78574570 | MS.gene31056:intron | 45.0% |
| ! | AGAAAGTGAGTTGCTGTTGG+AGG | - | chr3.3:78574549-78574568 | MS.gene31056:intron | 45.0% |
| ! | ATACACTTTGACTTTGCCGG+TGG | + | chr3.3:78572769-78572788 | None:intergenic | 45.0% |
| ! | CAAGTCTGGAACACTGTCAA+TGG | + | chr3.3:78575850-78575869 | None:intergenic | 45.0% |
| ! | CCTGAATTGATCAGGGGTAT+CGG | - | chr3.3:78572480-78572499 | MS.gene31056:CDS | 45.0% |
| ! | CTTTTCCTGTTGTTCGTCTC+AGG | - | chr3.3:78573861-78573880 | MS.gene31056:intron | 45.0% |
| ! | GAAAGTGAGTTGCTGTTGGA+GGG | - | chr3.3:78574550-78574569 | MS.gene31056:intron | 45.0% |
| ! | GAAGATTGGTCAGAGATGAG+AGG | + | chr3.3:78575456-78575475 | None:intergenic | 45.0% |
| !! | AGGAAAACATGGGTTGGCTT+TGG | - | chr3.3:78573653-78573672 | MS.gene31056:intron | 45.0% |
| !! | GGGGTATCGGAAAATACTCT+AGG | - | chr3.3:78572493-78572512 | MS.gene31056:CDS | 45.0% |
| !! | GTTCTTTGAGGCAGATAAGG+AGG | - | chr3.3:78575660-78575679 | MS.gene31056:intron | 45.0% |
| !!! | ATTTTTTTTGGGTACCGGGG+GGG | - | chr3.3:78573704-78573723 | MS.gene31056:intron | 45.0% |
| AACTTAGGTGGCTTCTCGAC+CGG | + | chr3.3:78572612-78572631 | None:intergenic | 50.0% | |
| ACAACAGGAAAAGGAGGAGG+GGG | + | chr3.3:78573854-78573873 | None:intergenic | 50.0% | |
| ACCTACCGACCGTAAACACA+TGG | + | chr3.3:78573305-78573324 | None:intergenic | 50.0% | |
| ACCTGCCTTCAAGGAAAACC+TGG | + | chr3.3:78575889-78575908 | None:intergenic | 50.0% | |
| CATTATGGATATGCCGGTGG+CGG | - | chr3.3:78573821-78573840 | MS.gene31056:intron | 50.0% | |
| CCCATTGAGACGTGTGAATC+AGG | - | chr3.3:78575522-78575541 | MS.gene31056:intron | 50.0% | |
| CCGATACCCCTGATCAATTC+AGG | + | chr3.3:78572483-78572502 | None:intergenic | 50.0% | |
| CGAACAACAGGAAAAGGAGG+AGG | + | chr3.3:78573857-78573876 | None:intergenic | 50.0% | |
| GAGTGGCTTCTTCACATCGT+CGG | + | chr3.3:78572643-78572662 | None:intergenic | 50.0% | |
| GCCGTAACCCTGAATTGATC+AGG | - | chr3.3:78572472-78572491 | MS.gene31056:CDS | 50.0% | |
| GCCTGATTCACACGTCTCAA+TGG | + | chr3.3:78575526-78575545 | None:intergenic | 50.0% | |
| GCTCACTGCGAAGTATGGAT+TGG | + | chr3.3:78573780-78573799 | None:intergenic | 50.0% | |
| GGCTGTTGCATTGTTGTGCA+AGG | + | chr3.3:78575279-78575298 | None:intergenic | 50.0% | |
| GGGAGAGAGCAAGTTCTTTG+AGG | - | chr3.3:78575648-78575667 | MS.gene31056:intron | 50.0% | |
| GTGACGAACCTGAGCTTAGT+GGG | + | chr3.3:78572687-78572706 | None:intergenic | 50.0% | |
| TCAAGGAAAACCTGGCACCA+AGG | + | chr3.3:78575881-78575900 | None:intergenic | 50.0% | |
| TCCATGTGTTTACGGTCGGT+AGG | - | chr3.3:78573301-78573320 | MS.gene31056:intron | 50.0% | |
| TTCAGGGCTTCCATTACTCC+TGG | - | chr3.3:78574128-78574147 | MS.gene31056:intron | 50.0% | |
| TTCCTGTTGTTCGTCTCAGG+GGG | - | chr3.3:78573864-78573883 | MS.gene31056:intron | 50.0% | |
| !! | AACCTGAGCTTAGTGGGCTT+TGG | + | chr3.3:78572681-78572700 | None:intergenic | 50.0% |
| !! | CATCGATTCCGCAACAGTCA+AGG | - | chr3.3:78574969-78574988 | MS.gene31056:intron | 50.0% |
| !! | GCTTTGGCTTGTGCTTGTTG+CGG | + | chr3.3:78572665-78572684 | None:intergenic | 50.0% |
| !! | TGAAGACTTACCTTGGTGCC+AGG | - | chr3.3:78575868-78575887 | MS.gene31056:CDS | 50.0% |
| !! | TGGTGCCAGGTTTTCCTTGA+AGG | - | chr3.3:78575881-78575900 | MS.gene31056:CDS | 50.0% |
| !!! | TTTTTTTTGGGTACCGGGGG+GGG | - | chr3.3:78573705-78573724 | MS.gene31056:intron | 50.0% |
| AGCCAAAGCCCACTAAGCTC+AGG | - | chr3.3:78572676-78572695 | MS.gene31056:intron | 55.0% | |
| AGGGAAAGAACCACCGTGCT+TGG | + | chr3.3:78572559-78572578 | None:intergenic | 55.0% | |
| AGGTGTGAAGCCACACGAGT+TGG | - | chr3.3:78575905-78575924 | MS.gene31056:CDS | 55.0% | |
| AGTGCTCCCCCAAGAGAAGA+AGG | - | chr3.3:78575788-78575807 | MS.gene31056:CDS | 55.0% | |
| CACATGGACGAAAGCAGGTC+AGG | + | chr3.3:78573289-78573308 | None:intergenic | 55.0% | |
| CATACTTCGCAGTGAGCAGC+GGG | - | chr3.3:78573783-78573802 | MS.gene31056:intron | 55.0% | |
| CCATACTTCGCAGTGAGCAG+CGG | - | chr3.3:78573782-78573801 | MS.gene31056:intron | 55.0% | |
| CTGCCATGTACCACAAGCGT+GGG | - | chr3.3:78572517-78572536 | MS.gene31056:CDS | 55.0% | |
| GGTGACGAACCTGAGCTTAG+TGG | + | chr3.3:78572688-78572707 | None:intergenic | 55.0% | |
| TCGGCGGGGTAAAACTTAGG+TGG | + | chr3.3:78572624-78572643 | None:intergenic | 55.0% | |
| TCGTCGGCGGGGTAAAACTT+AGG | + | chr3.3:78572627-78572646 | None:intergenic | 55.0% | |
| TCTGCCATGTACCACAAGCG+TGG | - | chr3.3:78572516-78572535 | MS.gene31056:CDS | 55.0% | |
| TGGCTTCACACCTGCCTTCA+AGG | + | chr3.3:78575898-78575917 | None:intergenic | 55.0% | |
| TGGCTTCTTCACATCGTCGG+CGG | + | chr3.3:78572640-78572659 | None:intergenic | 55.0% | |
| TGGGCCATCAAAGCCAAGCA+CGG | - | chr3.3:78572543-78572562 | MS.gene31056:CDS | 55.0% | |
| ! | GCCAGGTTTTCCTTGAAGGC+AGG | - | chr3.3:78575885-78575904 | MS.gene31056:CDS | 55.0% |
| !! | ACCACCGTGCTTGGCTTTGA+TGG | + | chr3.3:78572550-78572569 | None:intergenic | 55.0% |
| !! | GTTGCTGTTGGAGGGGTGTT+CGG | - | chr3.3:78574558-78574577 | MS.gene31056:intron | 55.0% |
| !!! | TTTTTTTGGGTACCGGGGGG+GGG | - | chr3.3:78573706-78573725 | MS.gene31056:intron | 55.0% |
| AGCCCCCTGAGACGAACAAC+AGG | + | chr3.3:78573869-78573888 | None:intergenic | 60.0% | |
| CCGCTGCTCACTGCGAAGTA+TGG | + | chr3.3:78573785-78573804 | None:intergenic | 60.0% | |
| GAGCCCACGCTTGTGGTACA+TGG | + | chr3.3:78572523-78572542 | None:intergenic | 60.0% | |
| GCCATCAAAGCCAAGCACGG+TGG | - | chr3.3:78572546-78572565 | MS.gene31056:CDS | 60.0% | |
| GCTTCTTCACATCGTCGGCG+GGG | + | chr3.3:78572638-78572657 | None:intergenic | 60.0% | |
| GGCTTCTTCACATCGTCGGC+GGG | + | chr3.3:78572639-78572658 | None:intergenic | 60.0% | |
| GTACCACAAGCGTGGGCTCT+GGG | - | chr3.3:78572524-78572543 | MS.gene31056:CDS | 60.0% | |
| TAGCGACGGGATCGTGACGA+GGG | + | chr3.3:78572578-78572597 | None:intergenic | 60.0% | |
| TCGTCACGATCCCGTCGCTA+AGG | - | chr3.3:78572578-78572597 | MS.gene31056:intron | 60.0% | |
| TGTACCACAAGCGTGGGCTC+TGG | - | chr3.3:78572523-78572542 | MS.gene31056:CDS | 60.0% | |
| TTAGCGACGGGATCGTGACG+AGG | + | chr3.3:78572579-78572598 | None:intergenic | 60.0% | |
| ! | ATCGTTCTGAGCGGCGACCA+TGG | - | chr3.3:78575161-78575180 | MS.gene31056:intron | 60.0% |
| ! | GGCTTGTGCTTGTTGCGGAG+TGG | + | chr3.3:78572660-78572679 | None:intergenic | 60.0% |
| ! | TCGTTCTGAGCGGCGACCAT+GGG | - | chr3.3:78575162-78575181 | MS.gene31056:intron | 60.0% |
| !!! | TTTTTTGGGTACCGGGGGGG+GGG | - | chr3.3:78573707-78573726 | MS.gene31056:intron | 60.0% |
| ACTTGACTGAACCCCCCCCC+CGG | + | chr3.3:78573721-78573740 | None:intergenic | 65.0% | |
| CAGGAAAAGGAGGAGGGGGC+TGG | + | chr3.3:78573850-78573869 | None:intergenic | 65.0% | |
| CGGAGCTGCAGCCTTAGCGA+CGG | + | chr3.3:78572592-78572611 | None:intergenic | 65.0% | |
| CGTCGCTAAGGCTGCAGCTC+CGG | - | chr3.3:78572590-78572609 | MS.gene31056:intron | 65.0% | |
| GGAGCTGCAGCCTTAGCGAC+GGG | + | chr3.3:78572591-78572610 | None:intergenic | 65.0% | |
| TTCGCAGTGAGCAGCGGGAC+AGG | - | chr3.3:78573788-78573807 | MS.gene31056:intron | 65.0% | |
| ! | CGTTCTGAGCGGCGACCATG+GGG | - | chr3.3:78575163-78575182 | MS.gene31056:intron | 65.0% |
| ! | GTTCTGAGCGGCGACCATGG+GGG | - | chr3.3:78575164-78575183 | MS.gene31056:intron | 65.0% |
| ACAGCTTCGGGGCTCCCCCA+TGG | + | chr3.3:78575181-78575200 | None:intergenic | 70.0% | |
| TGGCCCAGAGCCCACGCTTG+TGG | + | chr3.3:78572530-78572549 | None:intergenic | 70.0% | |
| AGGGGGCTGGAAGCCGCCAC+CGG | + | chr3.3:78573837-78573856 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78572441 | 78575935 | 78572441 | ID=MS.gene31056 |
| chr3.3 | mRNA | 78572441 | 78575935 | 78572441 | ID=MS.gene31056.t1;Parent=MS.gene31056 |
| chr3.3 | exon | 78575679 | 78575935 | 78575679 | ID=MS.gene31056.t1.exon1;Parent=MS.gene31056.t1 |
| chr3.3 | CDS | 78575679 | 78575935 | 78575679 | ID=cds.MS.gene31056.t1;Parent=MS.gene31056.t1 |
| chr3.3 | exon | 78574137 | 78574243 | 78574137 | ID=MS.gene31056.t1.exon2;Parent=MS.gene31056.t1 |
| chr3.3 | CDS | 78574137 | 78574243 | 78574137 | ID=cds.MS.gene31056.t1;Parent=MS.gene31056.t1 |
| chr3.3 | exon | 78572695 | 78572876 | 78572695 | ID=MS.gene31056.t1.exon3;Parent=MS.gene31056.t1 |
| chr3.3 | CDS | 78572695 | 78572876 | 78572695 | ID=cds.MS.gene31056.t1;Parent=MS.gene31056.t1 |
| chr3.3 | exon | 78572441 | 78572596 | 78572441 | ID=MS.gene31056.t1.exon4;Parent=MS.gene31056.t1 |
| chr3.3 | CDS | 78572441 | 78572596 | 78572441 | ID=cds.MS.gene31056.t1;Parent=MS.gene31056.t1 |
| Gene Sequence |
| Protein sequence |
