Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036487.t1 | XP_003611899.2 | 89.8 | 927 | 95 | 0 | 79 | 1005 | 80 | 1006 | 0.00E+00 | 1321.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036487.t1 | Q03701 | 33.1 | 694 | 366 | 14 | 166 | 838 | 202 | 818 | 3.3e-91 | 338.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036487.t1 | G7KAU4 | 89.8 | 927 | 95 | 0 | 79 | 1005 | 80 | 1006 | 0.0e+00 | 1321.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036487.t1 | MTR_4g119670 | 95.946 | 962 | 34 | 2 | 75 | 1035 | 75 | 1032 | 0.0 | 1871 |
MS.gene036487.t1 | MTR_5g019130 | 94.935 | 928 | 47 | 0 | 79 | 1006 | 80 | 1007 | 0.0 | 1588 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036487.t1 | AT1G72440 | 62.881 | 854 | 283 | 12 | 95 | 921 | 101 | 947 | 0.0 | 1016 |
Find 214 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTATGCATACCTTCATATT+TGG | 0.124860 | 8.1:-8601147 | None:intergenic |
TTGTCCTGCTTTATTGTTAT+TGG | 0.129713 | 8.1:+8596023 | MS.gene036487:CDS |
TTAAAGCCAGACCACCTTTA+TGG | 0.167130 | 8.1:+8603194 | MS.gene036487:CDS |
TTAGATGCTGCTTTATTATC+TGG | 0.214487 | 8.1:-8601087 | None:intergenic |
AACGATGCTAATAAGGAAAA+AGG | 0.215151 | 8.1:+8597616 | MS.gene036487:CDS |
GAACCTTTGCACGTGGTTTC+CGG | 0.229230 | 8.1:-8595133 | None:intergenic |
GATTTAGTGGCCGCTGTATC+AGG | 0.238783 | 8.1:-8600103 | None:intergenic |
CCATGCCAAGTGGTTTGTTT+TGG | 0.263037 | 8.1:-8604812 | None:intergenic |
AGAACAGGTGGTTTCGGTTT+AGG | 0.266446 | 8.1:-8597583 | None:intergenic |
ATTGAACAACGATGCTAATA+AGG | 0.273162 | 8.1:+8597609 | MS.gene036487:CDS |
GGTTTCTTTGATACAGTTAC+AGG | 0.277589 | 8.1:-8603440 | None:intergenic |
GACACAGAGAACCCTCTTAT+TGG | 0.282248 | 8.1:+8603717 | MS.gene036487:CDS |
GTTAAAGAGAGGTCATTTAA+AGG | 0.288140 | 8.1:-8604758 | None:intergenic |
GGCTTGAAGGTAAGGTGATT+GGG | 0.290943 | 8.1:+8597722 | MS.gene036487:CDS |
TTTCTCTTTCGGCCTCATTT+AGG | 0.298118 | 8.1:+8601461 | MS.gene036487:CDS |
CACTTTGATTAACACGATTC+CGG | 0.298538 | 8.1:-8595097 | None:intergenic |
GATTCTGCTGATCCCACTTT+GGG | 0.305519 | 8.1:+8605550 | MS.gene036487:CDS |
GAGTTGCCATCTTTAGTTTC+AGG | 0.310692 | 8.1:-8600131 | None:intergenic |
ATTAGACGTTTCGCCACTTT+TGG | 0.318343 | 8.1:-8602119 | None:intergenic |
TCCCGGCAACACATGCTTCT+TGG | 0.335139 | 8.1:-8603681 | None:intergenic |
GGTGGTTTCGGTTTAGGTTC+TGG | 0.336107 | 8.1:-8597577 | None:intergenic |
TCTTACTTTGGATGTATTCA+TGG | 0.336626 | 8.1:-8602854 | None:intergenic |
TGTGATTCTGAGAACTCTTC+GGG | 0.346953 | 8.1:-8602354 | None:intergenic |
GTATGCATACCTTCATATTT+GGG | 0.350788 | 8.1:-8601146 | None:intergenic |
ATGGCAAGAACTCTCCTTTC+TGG | 0.352065 | 8.1:+8604710 | MS.gene036487:CDS |
CAACTTCGTCTCACCAATAA+AGG | 0.356172 | 8.1:+8602089 | MS.gene036487:CDS |
TGTAAGTTGGTGGGAGTTAT+TGG | 0.359624 | 8.1:+8604652 | MS.gene036487:CDS |
TGTTGAGAAGAAGAGGGAAT+TGG | 0.362445 | 8.1:+8597792 | MS.gene036487:CDS |
ACTTTGATTAACACGATTCC+GGG | 0.362665 | 8.1:-8595096 | None:intergenic |
ATCGCTGGCTATCTGATTCT+TGG | 0.369232 | 8.1:-8602788 | None:intergenic |
ATGTGATTCTGAGAACTCTT+CGG | 0.372106 | 8.1:-8602355 | None:intergenic |
CTCAGAATCACATGCGGAAA+TGG | 0.372191 | 8.1:+8602365 | MS.gene036487:CDS |
TGACTATGATTATGATGATT+TGG | 0.374354 | 8.1:+8605582 | MS.gene036487:CDS |
GGGCTTGAAGGTAAGGTGAT+TGG | 0.376164 | 8.1:+8597721 | MS.gene036487:CDS |
TGCCAAGAAGCATGTGTTGC+CGG | 0.376524 | 8.1:+8603679 | MS.gene036487:CDS |
GCTTTCATCAATGGAAGCTT+TGG | 0.378809 | 8.1:-8597664 | None:intergenic |
AATTCACTTGCTTTCATCAA+TGG | 0.379765 | 8.1:-8597673 | None:intergenic |
GTTGAGAAGAAGAGGGAATT+GGG | 0.382565 | 8.1:+8597793 | MS.gene036487:CDS |
CAAGCTATGCGGTTTCAAAT+AGG | 0.384427 | 8.1:+8595933 | MS.gene036487:CDS |
TTAAAGAGAGGTCATTTAAA+GGG | 0.386789 | 8.1:-8604757 | None:intergenic |
CAACCGTTTGACTGTTGCTT+GGG | 0.388656 | 8.1:-8602296 | None:intergenic |
AGAAGAATCTGCGTCAGAAT+TGG | 0.389310 | 8.1:-8603501 | None:intergenic |
AGCTTTCCTAGATAAATTCA+TGG | 0.391541 | 8.1:+8604781 | MS.gene036487:CDS |
GATAGATATACCCTCAGATA+TGG | 0.393332 | 8.1:+8605690 | MS.gene036487:CDS |
TCAAGCAAATTACCAATAAG+AGG | 0.401774 | 8.1:-8603729 | None:intergenic |
CGTAAAATTGGTGGCAAAAG+TGG | 0.402326 | 8.1:+8605823 | MS.gene036487:CDS |
CGTCGTCCGCAAATCGTTCC+CGG | 0.403751 | 8.1:+8595078 | MS.gene036487:CDS |
GGATTCTGCTGATCCCACTT+TGG | 0.405499 | 8.1:+8605549 | MS.gene036487:CDS |
TGAAGAGATTGAGGATCTCT+TGG | 0.407389 | 8.1:+8605528 | MS.gene036487:CDS |
GTTTCAAATAGGTTGTTTCA+TGG | 0.408227 | 8.1:+8595944 | MS.gene036487:CDS |
TGAAGAATATGAACATATAC+TGG | 0.410106 | 8.1:+8605867 | MS.gene036487:CDS |
ACTTTGTTTACCTGCTTGAC+AGG | 0.411207 | 8.1:-8604851 | None:intergenic |
TACTTACCATAAAGGTGGTC+TGG | 0.412152 | 8.1:-8603200 | None:intergenic |
CCTACTCAGTAGCACATATA+TGG | 0.413790 | 8.1:-8600718 | None:intergenic |
GGAAAGCGCCATGCCTTGTC+AGG | 0.414813 | 8.1:+8599105 | MS.gene036487:CDS |
TCCATCATTACTTACCATAA+AGG | 0.414932 | 8.1:-8603208 | None:intergenic |
GTTTCAGGAATGTGATTTAG+TGG | 0.415456 | 8.1:-8600116 | None:intergenic |
TAGGATTGCAATTGGGTTGG+TGG | 0.418872 | 8.1:+8595909 | MS.gene036487:intron |
GAAACCACGTGCAAAGGTTC+CGG | 0.419945 | 8.1:+8595136 | MS.gene036487:CDS |
CGCAGGTGGGCTTGAAGGTA+AGG | 0.423051 | 8.1:+8597714 | MS.gene036487:CDS |
AGAGACCTCAAATTTGCAAC+AGG | 0.424866 | 8.1:-8597958 | None:intergenic |
ATAATCCTGTTGCAAATTTG+AGG | 0.425770 | 8.1:+8597953 | MS.gene036487:CDS |
GGCATGGCGCTTTCCAACCT+TGG | 0.425823 | 8.1:-8599097 | None:intergenic |
TATTCTTCATAACTTGCAAA+TGG | 0.426109 | 8.1:-8605853 | None:intergenic |
TCGTGTTAATCAAAGTGTTC+CGG | 0.426773 | 8.1:+8595103 | MS.gene036487:CDS |
ATCTTAACAACCTCTTGGTT+GGG | 0.430760 | 8.1:+8605314 | MS.gene036487:CDS |
AATGACAGAACAGGTGGTTT+CGG | 0.431089 | 8.1:-8597589 | None:intergenic |
ATTGATGAAAGCAAGTGAAT+TGG | 0.435756 | 8.1:+8597675 | MS.gene036487:CDS |
TGGTCTGGCTTTAAATAGTT+CGG | 0.438901 | 8.1:-8603185 | None:intergenic |
CGACGATTTAGACGACGCTT+TGG | 0.442461 | 8.1:+8603565 | MS.gene036487:CDS |
GAGGACGCAGGTGGGCTTGA+AGG | 0.444353 | 8.1:+8597709 | MS.gene036487:CDS |
TCCTAGGATTGCAATTGGGT+TGG | 0.448101 | 8.1:+8595906 | MS.gene036487:intron |
TTGATTTCTACTCAGAGGTC+TGG | 0.448923 | 8.1:+8597886 | MS.gene036487:CDS |
AAGCAAGTGAATTGGGTGTT+TGG | 0.451712 | 8.1:+8597683 | MS.gene036487:CDS |
TCAACCGTTTGACTGTTGCT+TGG | 0.455679 | 8.1:-8602297 | None:intergenic |
TCAGAGCTGGTAGCATGTCT+CGG | 0.455681 | 8.1:-8600437 | None:intergenic |
AAAGTGGAGATGAAGAATTT+CGG | 0.457363 | 8.1:+8597754 | MS.gene036487:CDS |
GCCTCATCGCTTGAGACAAA+AGG | 0.458218 | 8.1:-8602577 | None:intergenic |
AAAGTGTTCCGGTTGATATC+CGG | 0.458250 | 8.1:+8595114 | MS.gene036487:CDS |
GATTGGGGAAGGGAAGAAAG+TGG | 0.458607 | 8.1:+8597738 | MS.gene036487:CDS |
CAAGTCATCATCGTCCTCAT+TGG | 0.462757 | 8.1:-8605614 | None:intergenic |
ACGATTCCGGGAACGATTTG+CGG | 0.464142 | 8.1:-8595084 | None:intergenic |
TTTCTCCTAGGATTGCAATT+GGG | 0.464559 | 8.1:+8595902 | MS.gene036487:intron |
AGGGTCTTCAATTTACGATC+TGG | 0.465697 | 8.1:-8600083 | None:intergenic |
GATCTTAACAACCTCTTGGT+TGG | 0.466679 | 8.1:+8605313 | MS.gene036487:CDS |
GCTTCTATCTGCTCTCTTGA+CGG | 0.470384 | 8.1:+8602395 | MS.gene036487:CDS |
GAAGGTAAGGTGATTGGGGA+AGG | 0.470403 | 8.1:+8597727 | MS.gene036487:CDS |
TTATTCTAAGAGCAATGAAA+AGG | 0.470835 | 8.1:+8602988 | MS.gene036487:CDS |
AAGAATTTCGGTGAGTGGGA+AGG | 0.472981 | 8.1:+8597766 | MS.gene036487:CDS |
CTTTAAATAGTTCGGAAAGA+AGG | 0.474046 | 8.1:-8603177 | None:intergenic |
TGAATTGGGTGTTTGGTTTG+AGG | 0.474394 | 8.1:+8597690 | MS.gene036487:CDS |
AGAAGAGGGAATTGGGTCAG+AGG | 0.481371 | 8.1:+8597800 | MS.gene036487:CDS |
GTTGATGGCACAATTTGCTC+AGG | 0.481584 | 8.1:+8597822 | MS.gene036487:CDS |
CTATTTGAAACCGCATAGCT+TGG | 0.482649 | 8.1:-8595932 | None:intergenic |
TCATCATCAACAGCAGCAAA+TGG | 0.485383 | 8.1:-8605736 | None:intergenic |
GCAGGCTGTGGTTGTTAATG+AGG | 0.485966 | 8.1:+8601430 | MS.gene036487:intron |
TCAGCTAGTGAAAGAATCTC+AGG | 0.487904 | 8.1:-8605337 | None:intergenic |
TTAGACGACGCTTTGGAGGA+TGG | 0.488788 | 8.1:+8603572 | MS.gene036487:CDS |
CGATTTAGACGACGCTTTGG+AGG | 0.488878 | 8.1:+8603568 | MS.gene036487:CDS |
AGAATTTCGGTGAGTGGGAA+GGG | 0.489144 | 8.1:+8597767 | MS.gene036487:CDS |
GTTTGGTTTGAGGACGCAGG+TGG | 0.489269 | 8.1:+8597700 | MS.gene036487:CDS |
GTCTCAGCACCCAAATATGA+AGG | 0.489977 | 8.1:+8601137 | MS.gene036487:CDS |
TATTCATGGCAGCAGGAAGC+AGG | 0.491755 | 8.1:-8602840 | None:intergenic |
TTCAAGAATTATTTATTGCA+AGG | 0.492952 | 8.1:+8599139 | MS.gene036487:CDS |
CAGAGCTGGTAGCATGTCTC+GGG | 0.493823 | 8.1:-8600436 | None:intergenic |
GCCAAGAAGCATGTGTTGCC+GGG | 0.495244 | 8.1:+8603680 | MS.gene036487:CDS |
GCAGTGTCACCATTCTGAAC+AGG | 0.498228 | 8.1:-8603479 | None:intergenic |
TTATGGAAAACAAGATCCTC+TGG | 0.498674 | 8.1:-8605373 | None:intergenic |
CGTGGTTTCCGGATATCAAC+CGG | 0.503482 | 8.1:-8595122 | None:intergenic |
CCCAATACCAGAAAAGAAGA+AGG | 0.507558 | 8.1:-8600154 | None:intergenic |
AAGGGTTTGTTGAGAAGAAG+AGG | 0.508144 | 8.1:+8597785 | MS.gene036487:CDS |
TTGATGAAAGCAAGTGAATT+GGG | 0.509804 | 8.1:+8597676 | MS.gene036487:CDS |
TTGGATGTATTCATGGCAGC+AGG | 0.510909 | 8.1:-8602847 | None:intergenic |
CTTTATTGGTGAGACGAAGT+TGG | 0.511857 | 8.1:-8602088 | None:intergenic |
AGTGATGGAGAGATAGATAT+TGG | 0.514207 | 8.1:+8605649 | MS.gene036487:CDS |
ATTTAGTGGCCGCTGTATCA+GGG | 0.516236 | 8.1:-8600102 | None:intergenic |
CACATTCCTGAAACTAAAGA+TGG | 0.518005 | 8.1:+8600125 | MS.gene036487:CDS |
TCATAATCATAGTCACCGTC+TGG | 0.518817 | 8.1:-8605574 | None:intergenic |
GATGGATCTTAACAACCTCT+TGG | 0.518898 | 8.1:+8605309 | MS.gene036487:intron |
GATGAAGAATTTCGGTGAGT+GGG | 0.530400 | 8.1:+8597762 | MS.gene036487:CDS |
GGGAGGAATGTTTAAAGCAG+AGG | 0.530954 | 8.1:+8600174 | MS.gene036487:CDS |
CACATGCGGAAATGGACTCC+AGG | 0.531025 | 8.1:+8602373 | MS.gene036487:CDS |
TCAGATTGAACCTGTCAAGC+AGG | 0.533611 | 8.1:+8604841 | MS.gene036487:CDS |
CTTCAAAGCCTGACAAGGCA+TGG | 0.535279 | 8.1:-8599113 | None:intergenic |
TATTGTTATTGGTTGCAGAA+AGG | 0.536519 | 8.1:+8596034 | MS.gene036487:CDS |
AAGTGATAATGAAGAGATTG+AGG | 0.536700 | 8.1:+8605519 | MS.gene036487:CDS |
AGGTGATATTGATGAAATTG+AGG | 0.537875 | 8.1:+8605774 | MS.gene036487:CDS |
AAAAGAAAACGTAAAATTGG+TGG | 0.540487 | 8.1:+8605814 | MS.gene036487:CDS |
TATTCTAAGAGCAATGAAAA+GGG | 0.541088 | 8.1:+8602989 | MS.gene036487:CDS |
TAAAGGAGATGGACCAAAAG+TGG | 0.541271 | 8.1:+8602106 | MS.gene036487:CDS |
AGGGTTTGTTGAGAAGAAGA+GGG | 0.542375 | 8.1:+8597786 | MS.gene036487:CDS |
GGCTGTGGTTGTTAATGAGG+TGG | 0.544078 | 8.1:+8601433 | MS.gene036487:intron |
AACGGTTGATAAAAGCAGTA+AGG | 0.544090 | 8.1:+8602311 | MS.gene036487:CDS |
TATTTGGGTGCTGAGACAAA+AGG | 0.545659 | 8.1:-8601131 | None:intergenic |
CAAGAGAGCAGATAGAAGCC+TGG | 0.546187 | 8.1:-8602391 | None:intergenic |
GCTTGAAGGTAAGGTGATTG+GGG | 0.547426 | 8.1:+8597723 | MS.gene036487:CDS |
ATAGTTCGGAAAGAAGGAAA+AGG | 0.550072 | 8.1:-8603171 | None:intergenic |
GAAGAAATCAACTGATGATG+AGG | 0.550767 | 8.1:+8605441 | MS.gene036487:CDS |
GGAATTGGGTCAGAGGTTGA+TGG | 0.551263 | 8.1:+8597807 | MS.gene036487:CDS |
CGGGAACGATTTGCGGACGA+CGG | 0.555301 | 8.1:-8595077 | None:intergenic |
ATCATCCTCTTCCATATCTG+AGG | 0.556175 | 8.1:-8605701 | None:intergenic |
AAGGTAAGGTGATTGGGGAA+GGG | 0.556243 | 8.1:+8597728 | MS.gene036487:CDS |
GCAACCAATAACAATAAAGC+AGG | 0.562946 | 8.1:-8596027 | None:intergenic |
GTTTCCGTTGTAGACAATGT+TGG | 0.564024 | 8.1:-8604735 | None:intergenic |
TCGTTGTTCAATGACAGAAC+AGG | 0.564575 | 8.1:-8597598 | None:intergenic |
TGGCCCAAGCAACAGTCAAA+CGG | 0.569154 | 8.1:+8602293 | MS.gene036487:CDS |
CAATGAGGACGATGATGACT+TGG | 0.570289 | 8.1:+8605615 | MS.gene036487:CDS |
CGTCTCACCAATAAAGGAGA+TGG | 0.570373 | 8.1:+8602095 | MS.gene036487:CDS |
CTTGCCATGGTGGCAACTGA+AGG | 0.572750 | 8.1:-8604695 | None:intergenic |
CCATATATGTGCTACTGAGT+AGG | 0.572927 | 8.1:+8600718 | MS.gene036487:CDS |
TGCTGATCGTGTAAGTTGGT+GGG | 0.573283 | 8.1:+8604643 | MS.gene036487:CDS |
AAGAAGGAAAAGGCATGCAC+AGG | 0.573490 | 8.1:-8603161 | None:intergenic |
CCAAAACAAACCACTTGGCA+TGG | 0.574328 | 8.1:+8604812 | MS.gene036487:CDS |
TTGGTTGGTGATGTTAGTGA+TGG | 0.588494 | 8.1:+8605634 | MS.gene036487:CDS |
CAAGCAAATTACCAATAAGA+GGG | 0.589346 | 8.1:-8603728 | None:intergenic |
GACGGCGATGACGAGGTTGA+TGG | 0.589403 | 8.1:+8605487 | MS.gene036487:CDS |
AGATGAAGAATTTCGGTGAG+TGG | 0.590053 | 8.1:+8597761 | MS.gene036487:CDS |
AAGTGCTTCAAAGCCTGACA+AGG | 0.591722 | 8.1:-8599118 | None:intergenic |
AGACAATGTTGGCACCAGAA+AGG | 0.599029 | 8.1:-8604724 | None:intergenic |
TTGCCATGGTGGCAACTGAA+GGG | 0.599154 | 8.1:-8604694 | None:intergenic |
TCTAGGAATGGTGACATCCA+AGG | 0.599264 | 8.1:+8599080 | MS.gene036487:intron |
AGCACGGTAAAATCGATCGC+TGG | 0.599807 | 8.1:-8602803 | None:intergenic |
TATACCCTCAGATATGGAAG+AGG | 0.600500 | 8.1:+8605696 | MS.gene036487:CDS |
TATCCGGAAACCACGTGCAA+AGG | 0.601233 | 8.1:+8595130 | MS.gene036487:CDS |
AGGCATGCACAGGCATATTG+TGG | 0.601846 | 8.1:-8603151 | None:intergenic |
ACACCCTTCAGTTGCCACCA+TGG | 0.602222 | 8.1:+8604691 | MS.gene036487:CDS |
TGTCGTGGATCATAGCCTCC+CGG | 0.602639 | 8.1:-8603698 | None:intergenic |
AGATGTTGATTTCTACTCAG+AGG | 0.603125 | 8.1:+8597881 | MS.gene036487:CDS |
TGATGCTGACGGCGATGACG+AGG | 0.608512 | 8.1:+8605480 | MS.gene036487:CDS |
ACAGGTACAATGTCATCACT+TGG | 0.608611 | 8.1:-8603461 | None:intergenic |
GGTGTTTGGTTTGAGGACGC+AGG | 0.609882 | 8.1:+8597697 | MS.gene036487:CDS |
CCTACCGGAACCTTTGCACG+TGG | 0.609973 | 8.1:-8595140 | None:intergenic |
TTTGGTTTGAGGACGCAGGT+GGG | 0.610654 | 8.1:+8597701 | MS.gene036487:CDS |
ATGCTGATCGTGTAAGTTGG+TGG | 0.610821 | 8.1:+8604642 | MS.gene036487:CDS |
GGAATGGTGACATCCAAGGT+TGG | 0.611891 | 8.1:+8599084 | MS.gene036487:intron |
ATTACCAATTGGAAAAGTGC+TGG | 0.615409 | 8.1:-8602625 | None:intergenic |
CCAATACCAGAAAAGAAGAA+GGG | 0.617178 | 8.1:-8600153 | None:intergenic |
TGTCCACGTGGTCCTAAATG+AGG | 0.617830 | 8.1:-8601473 | None:intergenic |
TAAGAGGGTTCTCTGTGTCG+TGG | 0.618183 | 8.1:-8603713 | None:intergenic |
TTGTTCAATGACAGAACAGG+TGG | 0.619413 | 8.1:-8597595 | None:intergenic |
ATCATTACTTACCATAAAGG+TGG | 0.621222 | 8.1:-8603205 | None:intergenic |
TCATCCTCTTCCATATCTGA+GGG | 0.623798 | 8.1:-8605700 | None:intergenic |
TCACCGTCTGGTCCCAAAGT+GGG | 0.623980 | 8.1:-8605562 | None:intergenic |
GATGACAATGATCTTGACAT+AGG | 0.624826 | 8.1:+8605754 | MS.gene036487:CDS |
AAGGAGAGTTCTTGCCATGG+TGG | 0.626267 | 8.1:-8604705 | None:intergenic |
CAGGATTATGAATCAACTAG+AGG | 0.627344 | 8.1:+8597841 | MS.gene036487:CDS |
TCTGCTGCCTCAGATATGAA+CGG | 0.629480 | 8.1:+8600388 | MS.gene036487:intron |
CTAGGAAAGCTGTTAAAGAG+AGG | 0.629774 | 8.1:-8604769 | None:intergenic |
AAACAAACCACTTGGCATGG+TGG | 0.630983 | 8.1:+8604815 | MS.gene036487:CDS |
AATTGAAGACCCTGATACAG+CGG | 0.633823 | 8.1:+8600093 | MS.gene036487:CDS |
AAGGTTGGACAAGTGATAGT+CGG | 0.636604 | 8.1:-8601112 | None:intergenic |
GACATTGTACCTGTTCAGAA+TGG | 0.637890 | 8.1:+8603470 | MS.gene036487:CDS |
GCAATGCTGATCGTGTAAGT+TGG | 0.637965 | 8.1:+8604639 | MS.gene036487:intron |
GATCCCACTTTGGGACCAGA+CGG | 0.640420 | 8.1:+8605559 | MS.gene036487:CDS |
TGCTGAGAAAGAGCATACAC+TGG | 0.641867 | 8.1:+8605900 | MS.gene036487:CDS |
TGGGTGCTGAGACAAAAGGT+TGG | 0.644567 | 8.1:-8601127 | None:intergenic |
CGGCCTCATTTAGGACCACG+TGG | 0.652672 | 8.1:+8601470 | MS.gene036487:CDS |
TGAAGTAGATGTACCGCCAG+AGG | 0.657532 | 8.1:+8605357 | MS.gene036487:CDS |
GTCACCGTCTGGTCCCAAAG+TGG | 0.658221 | 8.1:-8605563 | None:intergenic |
CTGAGAACCACCATGCCAAG+TGG | 0.660533 | 8.1:-8604822 | None:intergenic |
TTTGGATAATGTAGCCAATG+AGG | 0.660665 | 8.1:+8605600 | MS.gene036487:CDS |
GAATCTCAGGCCCAACCAAG+AGG | 0.661070 | 8.1:-8605324 | None:intergenic |
GAGGACGATGATGACTTGGT+TGG | 0.661176 | 8.1:+8605619 | MS.gene036487:CDS |
GGGTTGGTGGCCAAGCTATG+CGG | 0.667401 | 8.1:+8595922 | MS.gene036487:CDS |
AGAAAGGAGAGTTCTTGCCA+TGG | 0.669905 | 8.1:-8604708 | None:intergenic |
AAGAAGCATGTGTTGCCGGG+AGG | 0.675168 | 8.1:+8603683 | MS.gene036487:CDS |
GGAGTTTCGAGTACAAAGCA+CGG | 0.683025 | 8.1:-8602819 | None:intergenic |
GGTGCCAACATTGTCTACAA+CGG | 0.690732 | 8.1:+8604731 | MS.gene036487:CDS |
CATGCACAGGCATATTGTGG+TGG | 0.703827 | 8.1:-8603148 | None:intergenic |
TCACTTGTCATATAGGAACA+CGG | 0.709971 | 8.1:+8603346 | MS.gene036487:intron |
AGAGTTCTCAGAATCACATG+CGG | 0.719836 | 8.1:+8602359 | MS.gene036487:CDS |
GGCGATGACGAGGTTGATGG+TGG | 0.724722 | 8.1:+8605490 | MS.gene036487:CDS |
TGGAAAACAAGATCCTCTGG+CGG | 0.727469 | 8.1:-8605370 | None:intergenic |
ACAGCATGATACTGTCCACG+TGG | 0.763718 | 8.1:-8601485 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 8595074 | 8605996 | 8595074 | ID=MS.gene036487 |
chr8.1 | mRNA | 8595074 | 8605996 | 8595074 | ID=MS.gene036487.t1;Parent=MS.gene036487 |
chr8.1 | exon | 8595074 | 8595157 | 8595074 | ID=MS.gene036487.t1.exon1;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8595074 | 8595157 | 8595074 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8595912 | 8596066 | 8595912 | ID=MS.gene036487.t1.exon2;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8595912 | 8596066 | 8595912 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8597537 | 8597994 | 8597537 | ID=MS.gene036487.t1.exon3;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8597537 | 8597994 | 8597537 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8599085 | 8599160 | 8599085 | ID=MS.gene036487.t1.exon4;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8599085 | 8599160 | 8599085 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8600076 | 8600195 | 8600076 | ID=MS.gene036487.t1.exon5;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8600076 | 8600195 | 8600076 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8600401 | 8600476 | 8600401 | ID=MS.gene036487.t1.exon6;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8600401 | 8600476 | 8600401 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8600717 | 8600785 | 8600717 | ID=MS.gene036487.t1.exon7;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8600717 | 8600785 | 8600717 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8601078 | 8601158 | 8601078 | ID=MS.gene036487.t1.exon8;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8601078 | 8601158 | 8601078 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8601434 | 8601505 | 8601434 | ID=MS.gene036487.t1.exon9;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8601434 | 8601505 | 8601434 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8602074 | 8602166 | 8602074 | ID=MS.gene036487.t1.exon10;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8602074 | 8602166 | 8602074 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8602282 | 8602416 | 8602282 | ID=MS.gene036487.t1.exon11;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8602282 | 8602416 | 8602282 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8602559 | 8602642 | 8602559 | ID=MS.gene036487.t1.exon12;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8602559 | 8602642 | 8602559 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8602727 | 8602870 | 8602727 | ID=MS.gene036487.t1.exon13;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8602727 | 8602870 | 8602727 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8602969 | 8603058 | 8602969 | ID=MS.gene036487.t1.exon14;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8602969 | 8603058 | 8602969 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8603133 | 8603215 | 8603133 | ID=MS.gene036487.t1.exon15;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8603133 | 8603215 | 8603133 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8603361 | 8603738 | 8603361 | ID=MS.gene036487.t1.exon16;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8603361 | 8603738 | 8603361 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8604640 | 8604862 | 8604640 | ID=MS.gene036487.t1.exon17;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8604640 | 8604862 | 8604640 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
chr8.1 | exon | 8605310 | 8605996 | 8605310 | ID=MS.gene036487.t1.exon18;Parent=MS.gene036487.t1 |
chr8.1 | CDS | 8605310 | 8605996 | 8605310 | ID=cds.MS.gene036487.t1;Parent=MS.gene036487.t1 |
Gene Sequence |
Protein sequence |