Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041557.t1 | XP_003611899.2 | 89.8 | 927 | 95 | 0 | 79 | 1005 | 80 | 1006 | 0.00E+00 | 1321.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041557.t1 | Q03701 | 33.1 | 694 | 366 | 14 | 166 | 838 | 202 | 818 | 3.3e-91 | 338.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041557.t1 | G7KAU4 | 89.8 | 927 | 95 | 0 | 79 | 1005 | 80 | 1006 | 0.0e+00 | 1321.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041557.t1 | MTR_4g119670 | 95.946 | 962 | 34 | 2 | 75 | 1035 | 75 | 1032 | 0.0 | 1871 |
| MS.gene041557.t1 | MTR_5g019130 | 94.935 | 928 | 47 | 0 | 79 | 1006 | 80 | 1007 | 0.0 | 1588 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041557.t1 | AT1G72440 | 62.881 | 854 | 283 | 12 | 95 | 921 | 101 | 947 | 0.0 | 1016 |
Find 214 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTATGCATACCTTCATATT+TGG | 0.124860 | 8.2:-10853126 | None:intergenic |
| TTGTCCTGCTTTATTGTTAT+TGG | 0.129713 | 8.2:+10848001 | MS.gene041557:CDS |
| TTAAAGCCAGACCACCTTTA+TGG | 0.167130 | 8.2:+10855173 | MS.gene041557:CDS |
| TTAGATGCTGCTTTATTATC+TGG | 0.214487 | 8.2:-10853066 | None:intergenic |
| AACGATGCTAATAAGGAAAA+AGG | 0.215151 | 8.2:+10849595 | MS.gene041557:CDS |
| GAACCTTTGCACGTGGTTTC+CGG | 0.229230 | 8.2:-10847111 | None:intergenic |
| GATTTAGTGGCCGCTGTATC+AGG | 0.238783 | 8.2:-10852082 | None:intergenic |
| CCATGCCAAGTGGTTTGTTT+TGG | 0.263037 | 8.2:-10856792 | None:intergenic |
| AGAACAGGTGGTTTCGGTTT+AGG | 0.266446 | 8.2:-10849562 | None:intergenic |
| ATTGAACAACGATGCTAATA+AGG | 0.273162 | 8.2:+10849588 | MS.gene041557:CDS |
| GGTTTCTTTGATACAGTTAC+AGG | 0.277589 | 8.2:-10855420 | None:intergenic |
| GACACAGAGAACCCTCTTAT+TGG | 0.282248 | 8.2:+10855697 | MS.gene041557:CDS |
| GTTAAAGAGAGGTCATTTAA+AGG | 0.288140 | 8.2:-10856738 | None:intergenic |
| GGCTTGAAGGTAAGGTGATT+GGG | 0.290943 | 8.2:+10849701 | MS.gene041557:CDS |
| TTTCTCTTTCGGCCTCATTT+AGG | 0.298118 | 8.2:+10853440 | MS.gene041557:CDS |
| CACTTTGATTAACACGATTC+CGG | 0.298538 | 8.2:-10847075 | None:intergenic |
| GATTCTGCTGATCCCACTTT+GGG | 0.305519 | 8.2:+10857530 | MS.gene041557:CDS |
| GAGTTGCCATCTTTAGTTTC+AGG | 0.310692 | 8.2:-10852110 | None:intergenic |
| ATTAGACGTTTCGCCACTTT+TGG | 0.318343 | 8.2:-10854098 | None:intergenic |
| TCCCGGCAACACATGCTTCT+TGG | 0.335139 | 8.2:-10855661 | None:intergenic |
| GGTGGTTTCGGTTTAGGTTC+TGG | 0.336107 | 8.2:-10849556 | None:intergenic |
| TCTTACTTTGGATGTATTCA+TGG | 0.336626 | 8.2:-10854833 | None:intergenic |
| TGTGATTCTGAGAACTCTTC+GGG | 0.346953 | 8.2:-10854333 | None:intergenic |
| GTATGCATACCTTCATATTT+GGG | 0.350788 | 8.2:-10853125 | None:intergenic |
| ATGGCAAGAACTCTCCTTTC+TGG | 0.352065 | 8.2:+10856690 | MS.gene041557:CDS |
| CAACTTCGTCTCACCAATAA+AGG | 0.356172 | 8.2:+10854068 | MS.gene041557:CDS |
| TGTAAGTTGGTGGGAGTTAT+TGG | 0.359624 | 8.2:+10856632 | MS.gene041557:CDS |
| TGTTGAGAAGAAGAGGGAAT+TGG | 0.362445 | 8.2:+10849771 | MS.gene041557:CDS |
| ACTTTGATTAACACGATTCC+GGG | 0.362665 | 8.2:-10847074 | None:intergenic |
| ATCGCTGGCTATCTGATTCT+TGG | 0.369232 | 8.2:-10854767 | None:intergenic |
| ATGTGATTCTGAGAACTCTT+CGG | 0.372106 | 8.2:-10854334 | None:intergenic |
| CTCAGAATCACATGCGGAAA+TGG | 0.372191 | 8.2:+10854344 | MS.gene041557:CDS |
| TGACTATGATTATGATGATT+TGG | 0.374354 | 8.2:+10857562 | MS.gene041557:CDS |
| GGGCTTGAAGGTAAGGTGAT+TGG | 0.376164 | 8.2:+10849700 | MS.gene041557:CDS |
| TGCCAAGAAGCATGTGTTGC+CGG | 0.376524 | 8.2:+10855659 | MS.gene041557:CDS |
| GCTTTCATCAATGGAAGCTT+TGG | 0.378809 | 8.2:-10849643 | None:intergenic |
| AATTCACTTGCTTTCATCAA+TGG | 0.379765 | 8.2:-10849652 | None:intergenic |
| GTTGAGAAGAAGAGGGAATT+GGG | 0.382565 | 8.2:+10849772 | MS.gene041557:CDS |
| TTAAAGAGAGGTCATTTAAA+GGG | 0.386789 | 8.2:-10856737 | None:intergenic |
| CAACCGTTTGACTGTTGCTT+GGG | 0.388656 | 8.2:-10854275 | None:intergenic |
| AGAAGAATCTGCGTCAGAAT+TGG | 0.389310 | 8.2:-10855481 | None:intergenic |
| AGCTTTCCTAGATAAATTCA+TGG | 0.391541 | 8.2:+10856761 | MS.gene041557:CDS |
| GATAGATATACCCTCAGATA+TGG | 0.393332 | 8.2:+10857670 | MS.gene041557:CDS |
| CAAGCTATGCGGTTTCAAAT+AGG | 0.395807 | 8.2:+10847911 | MS.gene041557:CDS |
| TCAAGCAAATTACCAATAAG+AGG | 0.401774 | 8.2:-10855709 | None:intergenic |
| CGTAAAATTGGTGGCAAAAG+TGG | 0.402326 | 8.2:+10857803 | MS.gene041557:CDS |
| CGTCGTCCGCAAATCGTTCC+CGG | 0.403751 | 8.2:+10847056 | MS.gene041557:CDS |
| GGATTCTGCTGATCCCACTT+TGG | 0.405499 | 8.2:+10857529 | MS.gene041557:CDS |
| TGAAGAGATTGAGGATCTCT+TGG | 0.407389 | 8.2:+10857508 | MS.gene041557:CDS |
| GTTTCAAATAGGCTGTTTCA+TGG | 0.409305 | 8.2:+10847922 | MS.gene041557:CDS |
| TGAAGAATATGAACATATAC+TGG | 0.410106 | 8.2:+10857847 | MS.gene041557:CDS |
| ACTTTGTTTACCTGCTTGAC+AGG | 0.411207 | 8.2:-10856831 | None:intergenic |
| TACTTACCATAAAGGTGGTC+TGG | 0.412152 | 8.2:-10855179 | None:intergenic |
| CCTACTCAGTAGCACATATA+TGG | 0.413790 | 8.2:-10852697 | None:intergenic |
| GGAAAGCGCCATGCCTTGTC+AGG | 0.414813 | 8.2:+10851084 | MS.gene041557:CDS |
| TCCATCATTACTTACCATAA+AGG | 0.414932 | 8.2:-10855187 | None:intergenic |
| GTTTCAGGAATGTGATTTAG+TGG | 0.415456 | 8.2:-10852095 | None:intergenic |
| TAGGATTGCAATTGGGTTGG+TGG | 0.418872 | 8.2:+10847887 | MS.gene041557:intron |
| GAAACCACGTGCAAAGGTTC+CGG | 0.419945 | 8.2:+10847114 | MS.gene041557:CDS |
| CGCAGGTGGGCTTGAAGGTA+AGG | 0.423051 | 8.2:+10849693 | MS.gene041557:CDS |
| AGAGACCTCAAATTTGCAAC+AGG | 0.424866 | 8.2:-10849937 | None:intergenic |
| ATAATCCTGTTGCAAATTTG+AGG | 0.425770 | 8.2:+10849932 | MS.gene041557:CDS |
| GGCATGGCGCTTTCCAACCT+TGG | 0.425823 | 8.2:-10851076 | None:intergenic |
| TATTCTTCATAACTTGCAAA+TGG | 0.426109 | 8.2:-10857833 | None:intergenic |
| TCGTGTTAATCAAAGTGTTC+CGG | 0.426773 | 8.2:+10847081 | MS.gene041557:CDS |
| ATCTTAACAACCTCTTGGTT+GGG | 0.430760 | 8.2:+10857294 | MS.gene041557:CDS |
| AATGACAGAACAGGTGGTTT+CGG | 0.431089 | 8.2:-10849568 | None:intergenic |
| ATTGATGAAAGCAAGTGAAT+TGG | 0.435756 | 8.2:+10849654 | MS.gene041557:CDS |
| TGGTCTGGCTTTAAATAGTT+CGG | 0.438901 | 8.2:-10855164 | None:intergenic |
| CGACGATTTAGACGACGCTT+TGG | 0.442461 | 8.2:+10855545 | MS.gene041557:CDS |
| GAGGACGCAGGTGGGCTTGA+AGG | 0.444353 | 8.2:+10849688 | MS.gene041557:CDS |
| TCCTAGGATTGCAATTGGGT+TGG | 0.448101 | 8.2:+10847884 | MS.gene041557:intron |
| TTGATTTCTACTCAGAGGTC+TGG | 0.448923 | 8.2:+10849865 | MS.gene041557:CDS |
| AAGCAAGTGAATTGGGTGTT+TGG | 0.451712 | 8.2:+10849662 | MS.gene041557:CDS |
| TCAACCGTTTGACTGTTGCT+TGG | 0.455679 | 8.2:-10854276 | None:intergenic |
| TCAGAGCTGGTAGCATGTCT+CGG | 0.455681 | 8.2:-10852416 | None:intergenic |
| AAAGTGGAGATGAAGAATTT+CGG | 0.457363 | 8.2:+10849733 | MS.gene041557:CDS |
| GCCTCATCGCTTGAGACAAA+AGG | 0.458218 | 8.2:-10854556 | None:intergenic |
| AAAGTGTTCCGGTTGATATC+CGG | 0.458250 | 8.2:+10847092 | MS.gene041557:CDS |
| GATTGGGGAAGGGAAGAAAG+TGG | 0.458607 | 8.2:+10849717 | MS.gene041557:CDS |
| CAAGTCATCATCGTCCTCAT+TGG | 0.462757 | 8.2:-10857594 | None:intergenic |
| ACGATTCCGGGAACGATTTG+CGG | 0.464142 | 8.2:-10847062 | None:intergenic |
| TTTCTCCTAGGATTGCAATT+GGG | 0.464559 | 8.2:+10847880 | MS.gene041557:intron |
| AGGGTCTTCAATTTACGATC+TGG | 0.465697 | 8.2:-10852062 | None:intergenic |
| GATCTTAACAACCTCTTGGT+TGG | 0.466679 | 8.2:+10857293 | MS.gene041557:CDS |
| GCTTCTATCTGCTCTCTTGA+CGG | 0.470384 | 8.2:+10854374 | MS.gene041557:CDS |
| GAAGGTAAGGTGATTGGGGA+AGG | 0.470403 | 8.2:+10849706 | MS.gene041557:CDS |
| TTATTCTAAGAGCAATGAAA+AGG | 0.470835 | 8.2:+10854967 | MS.gene041557:CDS |
| AAGAATTTCGGTGAGTGGGA+AGG | 0.472981 | 8.2:+10849745 | MS.gene041557:CDS |
| CTTTAAATAGTTCGGAAAGA+AGG | 0.474046 | 8.2:-10855156 | None:intergenic |
| TGAATTGGGTGTTTGGTTTG+AGG | 0.474394 | 8.2:+10849669 | MS.gene041557:CDS |
| AGAAGAGGGAATTGGGTCAG+AGG | 0.481371 | 8.2:+10849779 | MS.gene041557:CDS |
| GTTGATGGCACAATTTGCTC+AGG | 0.481584 | 8.2:+10849801 | MS.gene041557:CDS |
| CTATTTGAAACCGCATAGCT+TGG | 0.484838 | 8.2:-10847910 | None:intergenic |
| TCATCATCAACAGCAGCAAA+TGG | 0.485383 | 8.2:-10857716 | None:intergenic |
| GCAGGCTGTGGTTGTTAATG+AGG | 0.485966 | 8.2:+10853409 | MS.gene041557:intron |
| TCAGCTAGTGAAAGAATCTC+AGG | 0.487904 | 8.2:-10857317 | None:intergenic |
| TTAGACGACGCTTTGGAGGA+TGG | 0.488788 | 8.2:+10855552 | MS.gene041557:CDS |
| CGATTTAGACGACGCTTTGG+AGG | 0.488878 | 8.2:+10855548 | MS.gene041557:CDS |
| AGAATTTCGGTGAGTGGGAA+GGG | 0.489144 | 8.2:+10849746 | MS.gene041557:CDS |
| GTTTGGTTTGAGGACGCAGG+TGG | 0.489269 | 8.2:+10849679 | MS.gene041557:CDS |
| GTCTCAGCACCCAAATATGA+AGG | 0.489977 | 8.2:+10853116 | MS.gene041557:CDS |
| TATTCATGGCAGCAGGAAGC+AGG | 0.491755 | 8.2:-10854819 | None:intergenic |
| TTCAAGAATTATTTATTGCA+AGG | 0.492952 | 8.2:+10851118 | MS.gene041557:CDS |
| CAGAGCTGGTAGCATGTCTC+GGG | 0.493823 | 8.2:-10852415 | None:intergenic |
| GCCAAGAAGCATGTGTTGCC+GGG | 0.495244 | 8.2:+10855660 | MS.gene041557:CDS |
| GCAGTGTCACCATTCTGAAC+AGG | 0.498228 | 8.2:-10855459 | None:intergenic |
| TTATGGAAAACAAGATCCTC+TGG | 0.498674 | 8.2:-10857353 | None:intergenic |
| CGTGGTTTCCGGATATCAAC+CGG | 0.503482 | 8.2:-10847100 | None:intergenic |
| CCCAATACCAGAAAAGAAGA+AGG | 0.507558 | 8.2:-10852133 | None:intergenic |
| AAGGGTTTGTTGAGAAGAAG+AGG | 0.508144 | 8.2:+10849764 | MS.gene041557:CDS |
| TTGATGAAAGCAAGTGAATT+GGG | 0.509804 | 8.2:+10849655 | MS.gene041557:CDS |
| TTGGATGTATTCATGGCAGC+AGG | 0.510909 | 8.2:-10854826 | None:intergenic |
| CTTTATTGGTGAGACGAAGT+TGG | 0.511857 | 8.2:-10854067 | None:intergenic |
| AGTGATGGAGAGATAGATAT+TGG | 0.514207 | 8.2:+10857629 | MS.gene041557:CDS |
| ATTTAGTGGCCGCTGTATCA+GGG | 0.516236 | 8.2:-10852081 | None:intergenic |
| CACATTCCTGAAACTAAAGA+TGG | 0.518005 | 8.2:+10852104 | MS.gene041557:CDS |
| TCATAATCATAGTCACCGTC+TGG | 0.518817 | 8.2:-10857554 | None:intergenic |
| GATGGATCTTAACAACCTCT+TGG | 0.518898 | 8.2:+10857289 | MS.gene041557:intron |
| GATGAAGAATTTCGGTGAGT+GGG | 0.530400 | 8.2:+10849741 | MS.gene041557:CDS |
| GGGAGGAATGTTTAAAGCAG+AGG | 0.530954 | 8.2:+10852153 | MS.gene041557:CDS |
| CACATGCGGAAATGGACTCC+AGG | 0.531025 | 8.2:+10854352 | MS.gene041557:CDS |
| TCAGATTGAACCTGTCAAGC+AGG | 0.533611 | 8.2:+10856821 | MS.gene041557:CDS |
| CTTCAAAGCCTGACAAGGCA+TGG | 0.535279 | 8.2:-10851092 | None:intergenic |
| TATTGTTATTGGTTGCAGAA+AGG | 0.536519 | 8.2:+10848012 | MS.gene041557:CDS |
| AAGTGATAATGAAGAGATTG+AGG | 0.536700 | 8.2:+10857499 | MS.gene041557:CDS |
| AGGTGATATTGATGAAATTG+AGG | 0.537875 | 8.2:+10857754 | MS.gene041557:CDS |
| AAAAGAAAACGTAAAATTGG+TGG | 0.540487 | 8.2:+10857794 | MS.gene041557:CDS |
| TATTCTAAGAGCAATGAAAA+GGG | 0.541088 | 8.2:+10854968 | MS.gene041557:CDS |
| TAAAGGAGATGGACCAAAAG+TGG | 0.541271 | 8.2:+10854085 | MS.gene041557:CDS |
| AGGGTTTGTTGAGAAGAAGA+GGG | 0.542375 | 8.2:+10849765 | MS.gene041557:CDS |
| GGCTGTGGTTGTTAATGAGG+TGG | 0.544078 | 8.2:+10853412 | MS.gene041557:intron |
| AACGGTTGATAAAAGCAGTA+AGG | 0.544090 | 8.2:+10854290 | MS.gene041557:CDS |
| TATTTGGGTGCTGAGACAAA+AGG | 0.545659 | 8.2:-10853110 | None:intergenic |
| CAAGAGAGCAGATAGAAGCC+TGG | 0.546187 | 8.2:-10854370 | None:intergenic |
| GCTTGAAGGTAAGGTGATTG+GGG | 0.547426 | 8.2:+10849702 | MS.gene041557:CDS |
| ATAGTTCGGAAAGAAGGAAA+AGG | 0.550072 | 8.2:-10855150 | None:intergenic |
| GAAGAAATCAACTGATGATG+AGG | 0.550767 | 8.2:+10857421 | MS.gene041557:CDS |
| GGAATTGGGTCAGAGGTTGA+TGG | 0.551263 | 8.2:+10849786 | MS.gene041557:CDS |
| CGGGAACGATTTGCGGACGA+CGG | 0.555301 | 8.2:-10847055 | None:intergenic |
| ATCATCCTCTTCCATATCTG+AGG | 0.556175 | 8.2:-10857681 | None:intergenic |
| AAGGTAAGGTGATTGGGGAA+GGG | 0.556243 | 8.2:+10849707 | MS.gene041557:CDS |
| GCAACCAATAACAATAAAGC+AGG | 0.562946 | 8.2:-10848005 | None:intergenic |
| GTTTCCGTTGTAGACAATGT+TGG | 0.564024 | 8.2:-10856715 | None:intergenic |
| TCGTTGTTCAATGACAGAAC+AGG | 0.564575 | 8.2:-10849577 | None:intergenic |
| TGGCCCAAGCAACAGTCAAA+CGG | 0.569154 | 8.2:+10854272 | MS.gene041557:CDS |
| CAATGAGGACGATGATGACT+TGG | 0.570289 | 8.2:+10857595 | MS.gene041557:CDS |
| CGTCTCACCAATAAAGGAGA+TGG | 0.570373 | 8.2:+10854074 | MS.gene041557:CDS |
| CTTGCCATGGTGGCAACTGA+AGG | 0.572750 | 8.2:-10856675 | None:intergenic |
| CCATATATGTGCTACTGAGT+AGG | 0.572927 | 8.2:+10852697 | MS.gene041557:CDS |
| TGCTGATCGTGTAAGTTGGT+GGG | 0.573283 | 8.2:+10856623 | MS.gene041557:CDS |
| AAGAAGGAAAAGGCATGCAC+AGG | 0.573490 | 8.2:-10855140 | None:intergenic |
| CCAAAACAAACCACTTGGCA+TGG | 0.574328 | 8.2:+10856792 | MS.gene041557:CDS |
| TTGGTTGGTGATGTTAGTGA+TGG | 0.588494 | 8.2:+10857614 | MS.gene041557:CDS |
| CAAGCAAATTACCAATAAGA+GGG | 0.589346 | 8.2:-10855708 | None:intergenic |
| GACGGCGATGACGAGGTTGA+TGG | 0.589403 | 8.2:+10857467 | MS.gene041557:CDS |
| AGATGAAGAATTTCGGTGAG+TGG | 0.590053 | 8.2:+10849740 | MS.gene041557:CDS |
| AAGTGCTTCAAAGCCTGACA+AGG | 0.591722 | 8.2:-10851097 | None:intergenic |
| AGACAATGTTGGCACCAGAA+AGG | 0.599029 | 8.2:-10856704 | None:intergenic |
| TTGCCATGGTGGCAACTGAA+GGG | 0.599154 | 8.2:-10856674 | None:intergenic |
| TCTAGGAATGGTGACATCCA+AGG | 0.599264 | 8.2:+10851059 | MS.gene041557:intron |
| AGCACGGTAAAATCGATCGC+TGG | 0.599807 | 8.2:-10854782 | None:intergenic |
| TATACCCTCAGATATGGAAG+AGG | 0.600500 | 8.2:+10857676 | MS.gene041557:CDS |
| TATCCGGAAACCACGTGCAA+AGG | 0.601233 | 8.2:+10847108 | MS.gene041557:CDS |
| AGGCATGCACAGGCATATTG+TGG | 0.601846 | 8.2:-10855130 | None:intergenic |
| ACACCCTTCAGTTGCCACCA+TGG | 0.602222 | 8.2:+10856671 | MS.gene041557:CDS |
| TGTCGTGGATCATAGCCTCC+CGG | 0.602639 | 8.2:-10855678 | None:intergenic |
| AGATGTTGATTTCTACTCAG+AGG | 0.603125 | 8.2:+10849860 | MS.gene041557:CDS |
| TGATGCTGACGGCGATGACG+AGG | 0.608512 | 8.2:+10857460 | MS.gene041557:CDS |
| ACAGGTACAATGTCATCACT+TGG | 0.608611 | 8.2:-10855441 | None:intergenic |
| GGTGTTTGGTTTGAGGACGC+AGG | 0.609882 | 8.2:+10849676 | MS.gene041557:CDS |
| CCTACCGGAACCTTTGCACG+TGG | 0.609973 | 8.2:-10847118 | None:intergenic |
| TTTGGTTTGAGGACGCAGGT+GGG | 0.610654 | 8.2:+10849680 | MS.gene041557:CDS |
| ATGCTGATCGTGTAAGTTGG+TGG | 0.610821 | 8.2:+10856622 | MS.gene041557:CDS |
| GGAATGGTGACATCCAAGGT+TGG | 0.611891 | 8.2:+10851063 | MS.gene041557:intron |
| ATTACCAATTGGAAAAGTGC+TGG | 0.615409 | 8.2:-10854604 | None:intergenic |
| CCAATACCAGAAAAGAAGAA+GGG | 0.617178 | 8.2:-10852132 | None:intergenic |
| TGTCCACGTGGTCCTAAATG+AGG | 0.617830 | 8.2:-10853452 | None:intergenic |
| TAAGAGGGTTCTCTGTGTCG+TGG | 0.618183 | 8.2:-10855693 | None:intergenic |
| TTGTTCAATGACAGAACAGG+TGG | 0.619413 | 8.2:-10849574 | None:intergenic |
| ATCATTACTTACCATAAAGG+TGG | 0.621222 | 8.2:-10855184 | None:intergenic |
| TCATCCTCTTCCATATCTGA+GGG | 0.623798 | 8.2:-10857680 | None:intergenic |
| TCACCGTCTGGTCCCAAAGT+GGG | 0.623980 | 8.2:-10857542 | None:intergenic |
| GATGACAATGATCTTGACAT+AGG | 0.624826 | 8.2:+10857734 | MS.gene041557:CDS |
| AAGGAGAGTTCTTGCCATGG+TGG | 0.626267 | 8.2:-10856685 | None:intergenic |
| CAGGATTATGAATCAACTAG+AGG | 0.627344 | 8.2:+10849820 | MS.gene041557:CDS |
| TCTGCTGCCTCAGATATGAA+CGG | 0.629480 | 8.2:+10852367 | MS.gene041557:intron |
| CTAGGAAAGCTGTTAAAGAG+AGG | 0.629774 | 8.2:-10856749 | None:intergenic |
| AAACAAACCACTTGGCATGG+TGG | 0.630983 | 8.2:+10856795 | MS.gene041557:CDS |
| AATTGAAGACCCTGATACAG+CGG | 0.633823 | 8.2:+10852072 | MS.gene041557:CDS |
| AAGGTTGGACAAGTGATAGT+CGG | 0.636604 | 8.2:-10853091 | None:intergenic |
| GACATTGTACCTGTTCAGAA+TGG | 0.637890 | 8.2:+10855450 | MS.gene041557:CDS |
| GCAATGCTGATCGTGTAAGT+TGG | 0.637965 | 8.2:+10856619 | MS.gene041557:intron |
| GATCCCACTTTGGGACCAGA+CGG | 0.640420 | 8.2:+10857539 | MS.gene041557:CDS |
| TGCTGAGAAAGAGCATACAC+TGG | 0.641867 | 8.2:+10857880 | MS.gene041557:CDS |
| TGGGTGCTGAGACAAAAGGT+TGG | 0.644567 | 8.2:-10853106 | None:intergenic |
| CGGCCTCATTTAGGACCACG+TGG | 0.652672 | 8.2:+10853449 | MS.gene041557:CDS |
| TGAAGTAGATGTACCGCCAG+AGG | 0.657532 | 8.2:+10857337 | MS.gene041557:CDS |
| GTCACCGTCTGGTCCCAAAG+TGG | 0.658221 | 8.2:-10857543 | None:intergenic |
| CTGAGAACCACCATGCCAAG+TGG | 0.660533 | 8.2:-10856802 | None:intergenic |
| TTTGGATAATGTAGCCAATG+AGG | 0.660665 | 8.2:+10857580 | MS.gene041557:CDS |
| GAATCTCAGGCCCAACCAAG+AGG | 0.661070 | 8.2:-10857304 | None:intergenic |
| GAGGACGATGATGACTTGGT+TGG | 0.661176 | 8.2:+10857599 | MS.gene041557:CDS |
| GGGTTGGTGGCCAAGCTATG+CGG | 0.667401 | 8.2:+10847900 | MS.gene041557:CDS |
| AGAAAGGAGAGTTCTTGCCA+TGG | 0.669905 | 8.2:-10856688 | None:intergenic |
| AAGAAGCATGTGTTGCCGGG+AGG | 0.675168 | 8.2:+10855663 | MS.gene041557:CDS |
| GGAGTTTCGAGTACAAAGCA+CGG | 0.683025 | 8.2:-10854798 | None:intergenic |
| GGTGCCAACATTGTCTACAA+CGG | 0.690732 | 8.2:+10856711 | MS.gene041557:CDS |
| CATGCACAGGCATATTGTGG+TGG | 0.703827 | 8.2:-10855127 | None:intergenic |
| TCACTTGTCATATAGGAACA+CGG | 0.709971 | 8.2:+10855326 | MS.gene041557:intron |
| AGAGTTCTCAGAATCACATG+CGG | 0.719836 | 8.2:+10854338 | MS.gene041557:CDS |
| GGCGATGACGAGGTTGATGG+TGG | 0.724722 | 8.2:+10857470 | MS.gene041557:CDS |
| TGGAAAACAAGATCCTCTGG+CGG | 0.727469 | 8.2:-10857350 | None:intergenic |
| ACAGCATGATACTGTCCACG+TGG | 0.763718 | 8.2:-10853464 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10847052 | 10857976 | 10847052 | ID=MS.gene041557 |
| chr8.2 | mRNA | 10847052 | 10857976 | 10847052 | ID=MS.gene041557.t1;Parent=MS.gene041557 |
| chr8.2 | exon | 10847052 | 10847135 | 10847052 | ID=MS.gene041557.t1.exon1;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10847052 | 10847135 | 10847052 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10847890 | 10848044 | 10847890 | ID=MS.gene041557.t1.exon2;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10847890 | 10848044 | 10847890 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10849516 | 10849973 | 10849516 | ID=MS.gene041557.t1.exon3;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10849516 | 10849973 | 10849516 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10851064 | 10851139 | 10851064 | ID=MS.gene041557.t1.exon4;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10851064 | 10851139 | 10851064 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10852055 | 10852174 | 10852055 | ID=MS.gene041557.t1.exon5;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10852055 | 10852174 | 10852055 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10852380 | 10852455 | 10852380 | ID=MS.gene041557.t1.exon6;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10852380 | 10852455 | 10852380 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10852696 | 10852764 | 10852696 | ID=MS.gene041557.t1.exon7;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10852696 | 10852764 | 10852696 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10853057 | 10853137 | 10853057 | ID=MS.gene041557.t1.exon8;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10853057 | 10853137 | 10853057 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10853413 | 10853484 | 10853413 | ID=MS.gene041557.t1.exon9;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10853413 | 10853484 | 10853413 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10854053 | 10854145 | 10854053 | ID=MS.gene041557.t1.exon10;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10854053 | 10854145 | 10854053 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10854261 | 10854395 | 10854261 | ID=MS.gene041557.t1.exon11;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10854261 | 10854395 | 10854261 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10854538 | 10854621 | 10854538 | ID=MS.gene041557.t1.exon12;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10854538 | 10854621 | 10854538 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10854706 | 10854849 | 10854706 | ID=MS.gene041557.t1.exon13;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10854706 | 10854849 | 10854706 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10854948 | 10855037 | 10854948 | ID=MS.gene041557.t1.exon14;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10854948 | 10855037 | 10854948 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10855112 | 10855194 | 10855112 | ID=MS.gene041557.t1.exon15;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10855112 | 10855194 | 10855112 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10855341 | 10855718 | 10855341 | ID=MS.gene041557.t1.exon16;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10855341 | 10855718 | 10855341 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10856620 | 10856842 | 10856620 | ID=MS.gene041557.t1.exon17;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10856620 | 10856842 | 10856620 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| chr8.2 | exon | 10857290 | 10857976 | 10857290 | ID=MS.gene041557.t1.exon18;Parent=MS.gene041557.t1 |
| chr8.2 | CDS | 10857290 | 10857976 | 10857290 | ID=cds.MS.gene041557.t1;Parent=MS.gene041557.t1 |
| Gene Sequence |
| Protein sequence |
