Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013415.t1 | XP_013461530.1 | 100 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 8.20E-60 | 239.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013415.t1 | P49206 | 83.5 | 115 | 19 | 0 | 1 | 115 | 1 | 115 | 7.8e-51 | 201.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013415.t1 | A0A072VBJ7 | 100.0 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 5.9e-60 | 239.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59772 | MS.gene013415 | PPI |
| MS.gene013415 | MS.gene81244 | PPI |
| MS.gene013415 | MS.gene049387 | PPI |
| MS.gene013415 | MS.gene016408 | PPI |
| MS.gene08205 | MS.gene013415 | PPI |
| MS.gene013415 | MS.gene016407 | PPI |
| MS.gene51868 | MS.gene013415 | PPI |
| MS.gene059340 | MS.gene013415 | PPI |
| MS.gene38222 | MS.gene013415 | PPI |
| MS.gene013415 | MS.gene059340 | PPI |
| MS.gene013415 | MS.gene020871 | PPI |
| MS.gene38035 | MS.gene013415 | PPI |
| MS.gene013415 | MS.gene067809 | PPI |
| MS.gene013415 | MS.gene83159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013415.t1 | MTR_3g094220 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 1.10e-92 | 263 |
| MS.gene013415.t1 | MTR_5g097200 | 94.615 | 130 | 7 | 0 | 1 | 130 | 1 | 130 | 2.48e-87 | 250 |
| MS.gene013415.t1 | MTR_3g094220 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 2.65e-74 | 217 |
| MS.gene013415.t1 | MTR_5g097200 | 99.048 | 105 | 1 | 0 | 1 | 105 | 1 | 105 | 1.87e-73 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013415.t1 | AT2G40590 | 83.621 | 116 | 19 | 0 | 1 | 116 | 1 | 116 | 2.73e-68 | 202 |
| MS.gene013415.t1 | AT3G56340 | 83.621 | 116 | 19 | 0 | 1 | 116 | 1 | 116 | 3.96e-68 | 201 |
| MS.gene013415.t1 | AT2G40510 | 83.621 | 116 | 19 | 0 | 1 | 116 | 1 | 116 | 4.37e-68 | 201 |
Find 45 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACCGGGCTGGCCGGGCC+TGG | 0.190447 | 3.3:+78396675 | None:intergenic |
| TGACCGGGCTGGCCGGGCCT+GGG | 0.257962 | 3.3:+78396676 | None:intergenic |
| AGCAGGGCGTGGGGCTTGAC+CGG | 0.292902 | 3.3:+78396660 | None:intergenic |
| TGGGGCTTGACCGGGCTGGC+CGG | 0.319724 | 3.3:+78396669 | None:intergenic |
| AGCTGCAGTTAGGGATGTTC+AGG | 0.334420 | 3.3:-78398212 | MS.gene013415:CDS |
| GGGGCTTGACCGGGCTGGCC+GGG | 0.376921 | 3.3:+78396670 | None:intergenic |
| GCTCCTGGTCCAGCAGGGCG+TGG | 0.386043 | 3.3:+78396649 | None:intergenic |
| GGTCAAGCCCCACGCCCTGC+TGG | 0.391542 | 3.3:-78396658 | MS.gene013415:CDS |
| CTCCTGGTCCAGCAGGGCGT+GGG | 0.393652 | 3.3:+78396650 | None:intergenic |
| GGAGGAGCTCCTGGTCCAGC+AGG | 0.410657 | 3.3:+78396643 | None:intergenic |
| GCACGGGCTGGAGGAGCTCC+TGG | 0.413579 | 3.3:+78396634 | None:intergenic |
| CAGACGTTCAAGCGTAGAAA+TGG | 0.419772 | 3.3:-78398444 | MS.gene013415:CDS |
| TTGTTGAACAAGCTGCAGTT+AGG | 0.422831 | 3.3:-78398222 | MS.gene013415:CDS |
| GCATCTTCACATAGAGCTTA+GGG | 0.429592 | 3.3:+78398065 | None:intergenic |
| GCACCCAGGCCCGGCCAGCC+CGG | 0.443884 | 3.3:-78396679 | MS.gene013415:CDS |
| TGCATCTTCACATAGAGCTT+AGG | 0.448152 | 3.3:+78398064 | None:intergenic |
| GCCCCACGCCCTGCTGGACC+AGG | 0.451018 | 3.3:-78396652 | MS.gene013415:CDS |
| GCAGGGCGTGGGGCTTGACC+GGG | 0.458801 | 3.3:+78396661 | None:intergenic |
| GGCGTGGGGCTTGACCGGGC+TGG | 0.467003 | 3.3:+78396665 | None:intergenic |
| TGTTGAACAAGCTGCAGTTA+GGG | 0.467003 | 3.3:-78398221 | MS.gene013415:CDS |
| AGCCTCCACAGCGTTTCATT+AGG | 0.474568 | 3.3:-78397970 | MS.gene013415:CDS |
| AAGGATGACGCACCCAGGCC+CGG | 0.480226 | 3.3:-78396688 | MS.gene013415:CDS |
| AGCTTCATCTAGGCACGGGC+TGG | 0.485726 | 3.3:+78396622 | None:intergenic |
| CTATCCACTCTCACGTTGTG+AGG | 0.500174 | 3.3:-78398024 | MS.gene013415:CDS |
| CACAGCGTTTCATTAGGCGC+AGG | 0.511553 | 3.3:-78397964 | MS.gene013415:CDS |
| TCCTGGTCCAGCAGGGCGTG+GGG | 0.514682 | 3.3:+78396651 | None:intergenic |
| GGGTCAGATCTCGCACTGAC+AGG | 0.523518 | 3.3:-78398003 | MS.gene013415:CDS |
| GGTCGTAACAAGCATGGCCG+TGG | 0.529078 | 3.3:-78398420 | MS.gene013415:CDS |
| TTCATCCGTTGCTCCAACTG+TGG | 0.535536 | 3.3:-78398387 | MS.gene013415:CDS |
| TTCATCTAGGCACGGGCTGG+AGG | 0.539272 | 3.3:+78396625 | None:intergenic |
| CGCCTAATGAAACGCTGTGG+AGG | 0.567724 | 3.3:+78397968 | None:intergenic |
| TATTAGCTTCATCTAGGCAC+GGG | 0.571744 | 3.3:+78396618 | None:intergenic |
| CTGTGGAAAATGCTGTCCTA+AGG | 0.573602 | 3.3:-78398370 | MS.gene013415:intron |
| ATATTAGCTTCATCTAGGCA+CGG | 0.579130 | 3.3:+78396617 | None:intergenic |
| ACGTTCAAGCGTAGAAATGG+AGG | 0.581703 | 3.3:-78398441 | MS.gene013415:CDS |
| GAGGAGCTCCTGGTCCAGCA+GGG | 0.594077 | 3.3:+78396644 | None:intergenic |
| ACAGCGTTTCATTAGGCGCA+GGG | 0.598137 | 3.3:-78397963 | MS.gene013415:intron |
| TGACCCTCACAACGTGAGAG+TGG | 0.612357 | 3.3:+78398020 | None:intergenic |
| TATCCACTCTCACGTTGTGA+GGG | 0.624539 | 3.3:-78398023 | MS.gene013415:CDS |
| GGATGAATTTGACATGGCCA+CGG | 0.627886 | 3.3:+78398403 | None:intergenic |
| AATGGAGGTCGTAACAAGCA+TGG | 0.634174 | 3.3:-78398426 | MS.gene013415:CDS |
| TCAGATCTCGCACTGACAGG+AGG | 0.634180 | 3.3:-78398000 | MS.gene013415:CDS |
| AGCAACGGATGAATTTGACA+TGG | 0.665067 | 3.3:+78398397 | None:intergenic |
| AACGTGAGAGTGGATAGCAC+AGG | 0.683104 | 3.3:+78398030 | None:intergenic |
| CTGCGCCTAATGAAACGCTG+TGG | 0.693414 | 3.3:+78397965 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACATTATTAGATTATTTT+TGG | + | chr3.3:78397525-78397544 | None:intergenic | 10.0% |
| !!! | ATTTTTTTGTTTTGTTAAAT+AGG | - | chr3.3:78396886-78396905 | MS.gene013415:intron | 10.0% |
| !! | AATTATGCTATATATTTCAT+TGG | - | chr3.3:78398421-78398440 | MS.gene013415:CDS | 15.0% |
| !! | ATACAATTGTGATAAATTTA+GGG | + | chr3.3:78397365-78397384 | None:intergenic | 15.0% |
| !! | CAAAATATGAAATCTAAATT+GGG | + | chr3.3:78398217-78398236 | None:intergenic | 15.0% |
| !! | CAATTAACAAACAAATTTAA+TGG | + | chr3.3:78396697-78396716 | None:intergenic | 15.0% |
| !! | TCAAAATATGAAATCTAAAT+TGG | + | chr3.3:78398218-78398237 | None:intergenic | 15.0% |
| !!! | GTTTATTTAATTCTTTTTGA+AGG | - | chr3.3:78398457-78398476 | MS.gene013415:intron | 15.0% |
| !! | AAAAAAAGATGAAATACCTT+AGG | + | chr3.3:78396813-78396832 | None:intergenic | 20.0% |
| !! | AAAACCAACAAAAGTAAATA+AGG | + | chr3.3:78397243-78397262 | None:intergenic | 20.0% |
| !! | AAACCAACAAAAGTAAATAA+GGG | + | chr3.3:78397242-78397261 | None:intergenic | 20.0% |
| !! | ACAATTGTATGTTTCTTTAT+TGG | - | chr3.3:78397375-78397394 | MS.gene013415:intron | 20.0% |
| !! | ATATAAACCTAAAGCATATT+AGG | + | chr3.3:78397640-78397659 | None:intergenic | 20.0% |
| !! | CATACAATTGTGATAAATTT+AGG | + | chr3.3:78397366-78397385 | None:intergenic | 20.0% |
| !! | TACAATTGTGATAAATTTAG+GGG | + | chr3.3:78397364-78397383 | None:intergenic | 20.0% |
| !! | TTGAAGGAAAAAAAAATAGT+TGG | + | chr3.3:78398189-78398208 | None:intergenic | 20.0% |
| !!! | TTTATCTGTTTCTGTAAAAA+TGG | - | chr3.3:78397543-78397562 | MS.gene013415:intron | 20.0% |
| ! | AACAAAAGTAAATAAGGGAA+AGG | + | chr3.3:78397237-78397256 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAAATAGTTGG+CGG | + | chr3.3:78398186-78398205 | None:intergenic | 25.0% |
| ! | GATAACTTGATTTAGACATT+TGG | - | chr3.3:78397996-78398015 | MS.gene013415:CDS | 25.0% |
| ! | TCTTTATTGGATTCGATATA+GGG | - | chr3.3:78397388-78397407 | MS.gene013415:intron | 25.0% |
| ! | TTCTTTAGCTATGAAATTGT+TGG | - | chr3.3:78398359-78398378 | MS.gene013415:intron | 25.0% |
| ! | TTCTTTATTGGATTCGATAT+AGG | - | chr3.3:78397387-78397406 | MS.gene013415:intron | 25.0% |
| !! | ATAAAACAAATGTGCTATTG+AGG | + | chr3.3:78398054-78398073 | None:intergenic | 25.0% |
| !! | ATATATCTTGTTACTTGAGT+GGG | - | chr3.3:78398260-78398279 | MS.gene013415:intron | 25.0% |
| !! | TTTCTTTTCATGTTGTCTTT+AGG | - | chr3.3:78398092-78398111 | MS.gene013415:intron | 25.0% |
| !!! | ATTTTGATTATCCTCTCTTT+TGG | - | chr3.3:78398231-78398250 | MS.gene013415:CDS | 25.0% |
| !!! | TCTAAATTGGGATATTTTGA+AGG | + | chr3.3:78398205-78398224 | None:intergenic | 25.0% |
| !!! | TTTCCCTTATTTACTTTTGT+TGG | - | chr3.3:78397236-78397255 | MS.gene013415:intron | 25.0% |
| AAAAAAAAATAGTTGGCGGT+TGG | + | chr3.3:78398182-78398201 | None:intergenic | 30.0% | |
| AAGTCATCCTAAATGATAAC+AGG | + | chr3.3:78398149-78398168 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr3.3:78397695-78397714 | MS.gene013415:intron | 30.0% | |
| ACAATGATAATACCTCAGAT+TGG | - | chr3.3:78397337-78397356 | MS.gene013415:intron | 30.0% | |
| CTCTTGGTTTATATAACTAG+TGG | - | chr3.3:78397718-78397737 | MS.gene013415:intron | 30.0% | |
| TATATCTTCAACCAAAAGAG+AGG | + | chr3.3:78398245-78398264 | None:intergenic | 30.0% | |
| TCATCACTACTTTATACTAC+TGG | + | chr3.3:78397899-78397918 | None:intergenic | 30.0% | |
| ! | CTGTTTTCCTAATATGCTTT+AGG | - | chr3.3:78397630-78397649 | MS.gene013415:intron | 30.0% |
| ! | GATATATCTTGTTACTTGAG+TGG | - | chr3.3:78398259-78398278 | MS.gene013415:CDS | 30.0% |
| ! | TTTCATTGGTTGTGTCTAAT+TGG | - | chr3.3:78398435-78398454 | MS.gene013415:CDS | 30.0% |
| !! | AAAGAGCATCATTCACAAAT+TGG | + | chr3.3:78397864-78397883 | None:intergenic | 30.0% |
| !! | CTTTGAAATCTAATGTTGAG+AGG | - | chr3.3:78397308-78397327 | MS.gene013415:intron | 30.0% |
| AAGCTTGTGAAAATTGCCAT+CGG | + | chr3.3:78397478-78397497 | None:intergenic | 35.0% | |
| ATATAAACCAAGAGCCTGTT+TGG | + | chr3.3:78397712-78397731 | None:intergenic | 35.0% | |
| ATTGAGGTAGCATTTGAGAA+AGG | + | chr3.3:78398038-78398057 | None:intergenic | 35.0% | |
| CTCTTGGTTTATATAACCAG+TGG | - | chr3.3:78397804-78397823 | MS.gene013415:intron | 35.0% | |
| GAAAACATGAAAATAGCCGA+TGG | - | chr3.3:78397459-78397478 | MS.gene013415:intron | 35.0% | |
| GCTTATTTGAGCTTATCAAC+TGG | - | chr3.3:78397424-78397443 | MS.gene013415:intron | 35.0% | |
| GTGAATGCCTGTTATCATTT+AGG | - | chr3.3:78398139-78398158 | MS.gene013415:intron | 35.0% | |
| TAAACAGAAATGGTCCATAG+TGG | + | chr3.3:78397774-78397793 | None:intergenic | 35.0% | |
| TATCAGATACGGAGATTAAC+AGG | + | chr3.3:78396662-78396681 | None:intergenic | 35.0% | |
| TCATCACTACTTTATACCAC+TGG | + | chr3.3:78397823-78397842 | None:intergenic | 35.0% | |
| TCATCACTACTTTATGCTAC+TGG | + | chr3.3:78397665-78397684 | None:intergenic | 35.0% | |
| !! | GAGATTGAGAGTATCAGATA+CGG | + | chr3.3:78396673-78396692 | None:intergenic | 35.0% |
| AAATTTAGGGGTCCAATCTG+AGG | + | chr3.3:78397352-78397371 | None:intergenic | 40.0% | |
| ACGGAGATTAACAGGAGTTA+GGG | + | chr3.3:78396654-78396673 | None:intergenic | 40.0% | |
| AGAAATGGTCCATAGTGGTA+TGG | + | chr3.3:78397769-78397788 | None:intergenic | 40.0% | |
| AGCAACGGATGAATTTGACA+TGG | + | chr3.3:78396770-78396789 | None:intergenic | 40.0% | |
| ATATAAACCAAGAGCCTGCT+TGG | + | chr3.3:78397798-78397817 | None:intergenic | 40.0% | |
| CATTCACAAATTGGTCACAG+TGG | + | chr3.3:78397855-78397874 | None:intergenic | 40.0% | |
| CCAATGTGTCCAATTTGTGA+AGG | - | chr3.3:78397928-78397947 | MS.gene013415:intron | 40.0% | |
| CCATTTCTGTTTATCCAAGC+AGG | - | chr3.3:78397781-78397800 | MS.gene013415:intron | 40.0% | |
| CCTGCTTGGATAAACAGAAA+TGG | + | chr3.3:78397784-78397803 | None:intergenic | 40.0% | |
| CCTTCACAAATTGGACACAT+TGG | + | chr3.3:78397931-78397950 | None:intergenic | 40.0% | |
| GATATAGGGTCTGTTTGGAT+TGG | - | chr3.3:78397402-78397421 | MS.gene013415:intron | 40.0% | |
| GATTCGATATAGGGTCTGTT+TGG | - | chr3.3:78397397-78397416 | MS.gene013415:intron | 40.0% | |
| GCATCTTCACATAGAGCTTA+GGG | + | chr3.3:78397102-78397121 | None:intergenic | 40.0% | |
| GGTAGCATTTGAGAAAGGAT+AGG | + | chr3.3:78398033-78398052 | None:intergenic | 40.0% | |
| TACGGAGATTAACAGGAGTT+AGG | + | chr3.3:78396655-78396674 | None:intergenic | 40.0% | |
| TATAGTGTGCCATACCACTA+TGG | - | chr3.3:78397757-78397776 | MS.gene013415:intron | 40.0% | |
| TGCATCTTCACATAGAGCTT+AGG | + | chr3.3:78397103-78397122 | None:intergenic | 40.0% | |
| TGTGTCCAATTTGTGAAGGA+TGG | - | chr3.3:78397932-78397951 | MS.gene013415:intron | 40.0% | |
| TGTTGAACAAGCTGCAGTTA+GGG | - | chr3.3:78396943-78396962 | MS.gene013415:intron | 40.0% | |
| TGTTTATCCAAACAGGCTCT+TGG | - | chr3.3:78397702-78397721 | MS.gene013415:intron | 40.0% | |
| TTGTTGAACAAGCTGCAGTT+AGG | - | chr3.3:78396942-78396961 | MS.gene013415:intron | 40.0% | |
| ! | ATTTTCCACAGTTGGAGCAA+CGG | + | chr3.3:78396785-78396804 | None:intergenic | 40.0% |
| ! | CTATCAAGCGTTTTCTTGTG+AGG | - | chr3.3:78396915-78396934 | MS.gene013415:intron | 40.0% |
| AATGGAGGTCGTAACAAGCA+TGG | - | chr3.3:78396738-78396757 | MS.gene013415:intron | 45.0% | |
| ACGTTCAAGCGTAGAAATGG+AGG | - | chr3.3:78396723-78396742 | MS.gene013415:intron | 45.0% | |
| CACCACCATCCTTCACAAAT+TGG | + | chr3.3:78397940-78397959 | None:intergenic | 45.0% | |
| CAGACGTTCAAGCGTAGAAA+TGG | - | chr3.3:78396720-78396739 | MS.gene013415:intron | 45.0% | |
| CTGTGGAAAATGCTGTCCTA+AGG | - | chr3.3:78396794-78396813 | MS.gene013415:intron | 45.0% | |
| GGATGAATTTGACATGGCCA+CGG | + | chr3.3:78396764-78396783 | None:intergenic | 45.0% | |
| GTCCAATTTGTGAAGGATGG+TGG | - | chr3.3:78397935-78397954 | MS.gene013415:intron | 45.0% | |
| TATCCACTCTCACGTTGTGA+GGG | - | chr3.3:78397141-78397160 | MS.gene013415:intron | 45.0% | |
| TGTTTATCCAAGCAGGCTCT+TGG | - | chr3.3:78397788-78397807 | MS.gene013415:intron | 45.0% | |
| ! | AGGACAGCATTTTCCACAGT+TGG | + | chr3.3:78396793-78396812 | None:intergenic | 45.0% |
| AACGTGAGAGTGGATAGCAC+AGG | + | chr3.3:78397137-78397156 | None:intergenic | 50.0% | |
| ACAGCGTTTCATTAGGCGCA+GGG | - | chr3.3:78397201-78397220 | MS.gene013415:intron | 50.0% | |
| AGCCTCCACAGCGTTTCATT+AGG | - | chr3.3:78397194-78397213 | MS.gene013415:intron | 50.0% | |
| AGCTGCAGTTAGGGATGTTC+AGG | - | chr3.3:78396952-78396971 | MS.gene013415:intron | 50.0% | |
| CAGGAGTTAGGGATTCCGAT+CGG | + | chr3.3:78396643-78396662 | None:intergenic | 50.0% | |
| CTATCCACTCTCACGTTGTG+AGG | - | chr3.3:78397140-78397159 | MS.gene013415:intron | 50.0% | |
| TTCATCCGTTGCTCCAACTG+TGG | - | chr3.3:78396777-78396796 | MS.gene013415:intron | 50.0% | |
| !! | TTTTGAAGGATGACGCACCC+AGG | - | chr3.3:78398471-78398490 | MS.gene013415:intron | 50.0% |
| CACAGCGTTTCATTAGGCGC+AGG | - | chr3.3:78397200-78397219 | MS.gene013415:intron | 55.0% | |
| CGCCTAATGAAACGCTGTGG+AGG | + | chr3.3:78397199-78397218 | None:intergenic | 55.0% | |
| CTGCGCCTAATGAAACGCTG+TGG | + | chr3.3:78397202-78397221 | None:intergenic | 55.0% | |
| TGACCCTCACAACGTGAGAG+TGG | + | chr3.3:78397147-78397166 | None:intergenic | 55.0% | |
| ! | TCAGATCTCGCACTGACAGG+AGG | - | chr3.3:78397164-78397183 | MS.gene013415:intron | 55.0% |
| GGTCGTAACAAGCATGGCCG+TGG | - | chr3.3:78396744-78396763 | MS.gene013415:intron | 60.0% | |
| ! | GGGTCAGATCTCGCACTGAC+AGG | - | chr3.3:78397161-78397180 | MS.gene013415:intron | 60.0% |
| AAGGATGACGCACCCAGGCC+CGG | - | chr3.3:78398476-78398495 | MS.gene013415:intron | 65.0% | |
| GAGGAGCTCCTGGTCCAGCA+GGG | + | chr3.3:78398523-78398542 | None:intergenic | 65.0% | |
| AGCAGGGCGTGGGGCTTGAC+CGG | + | chr3.3:78398507-78398526 | None:intergenic | 70.0% | |
| CTCCTGGTCCAGCAGGGCGT+GGG | + | chr3.3:78398517-78398536 | None:intergenic | 70.0% | |
| GGAGGAGCTCCTGGTCCAGC+AGG | + | chr3.3:78398524-78398543 | None:intergenic | 70.0% | |
| TCCTGGTCCAGCAGGGCGTG+GGG | + | chr3.3:78398516-78398535 | None:intergenic | 70.0% | |
| GCAGGGCGTGGGGCTTGACC+GGG | + | chr3.3:78398506-78398525 | None:intergenic | 75.0% | |
| GCTCCTGGTCCAGCAGGGCG+TGG | + | chr3.3:78398518-78398537 | None:intergenic | 75.0% | |
| GGTCAAGCCCCACGCCCTGC+TGG | - | chr3.3:78398506-78398525 | MS.gene013415:intron | 75.0% | |
| !! | GCACGGGCTGGAGGAGCTCC+TGG | + | chr3.3:78398533-78398552 | None:intergenic | 75.0% |
| !! | TGGGGCTTGACCGGGCTGGC+CGG | + | chr3.3:78398498-78398517 | None:intergenic | 75.0% |
| ! | GCCCCACGCCCTGCTGGACC+AGG | - | chr3.3:78398512-78398531 | MS.gene013415:intron | 80.0% |
| ! | GGCGTGGGGCTTGACCGGGC+TGG | + | chr3.3:78398502-78398521 | None:intergenic | 80.0% |
| !!! | GGGGCTTGACCGGGCTGGCC+GGG | + | chr3.3:78398497-78398516 | None:intergenic | 80.0% |
| !!! | TGACCGGGCTGGCCGGGCCT+GGG | + | chr3.3:78398491-78398510 | None:intergenic | 80.0% |
| !!! | TTGACCGGGCTGGCCGGGCC+TGG | + | chr3.3:78398492-78398511 | None:intergenic | 80.0% |
| ! | GCACCCAGGCCCGGCCAGCC+CGG | - | chr3.3:78398485-78398504 | MS.gene013415:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78396630 | 78398556 | 78396630 | ID=MS.gene013415 |
| chr3.3 | mRNA | 78396630 | 78398556 | 78396630 | ID=MS.gene013415.t1;Parent=MS.gene013415 |
| chr3.3 | exon | 78398554 | 78398556 | 78398554 | ID=MS.gene013415.t1.exon1;Parent=MS.gene013415.t1 |
| chr3.3 | CDS | 78398554 | 78398556 | 78398554 | ID=cds.MS.gene013415.t1;Parent=MS.gene013415.t1 |
| chr3.3 | exon | 78398371 | 78398463 | 78398371 | ID=MS.gene013415.t1.exon2;Parent=MS.gene013415.t1 |
| chr3.3 | CDS | 78398371 | 78398463 | 78398371 | ID=cds.MS.gene013415.t1;Parent=MS.gene013415.t1 |
| chr3.3 | exon | 78398194 | 78398278 | 78398194 | ID=MS.gene013415.t1.exon3;Parent=MS.gene013415.t1 |
| chr3.3 | CDS | 78398194 | 78398278 | 78398194 | ID=cds.MS.gene013415.t1;Parent=MS.gene013415.t1 |
| chr3.3 | exon | 78397964 | 78398097 | 78397964 | ID=MS.gene013415.t1.exon4;Parent=MS.gene013415.t1 |
| chr3.3 | CDS | 78397964 | 78398097 | 78397964 | ID=cds.MS.gene013415.t1;Parent=MS.gene013415.t1 |
| chr3.3 | exon | 78396630 | 78396707 | 78396630 | ID=MS.gene013415.t1.exon5;Parent=MS.gene013415.t1 |
| chr3.3 | CDS | 78396630 | 78396707 | 78396630 | ID=cds.MS.gene013415.t1;Parent=MS.gene013415.t1 |
| Gene Sequence |
| Protein sequence |
