AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019143

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019143.t1 MTR_3g449590 97.680 431 10 0 1 431 1 431 0.0 859
MS.gene019143.t1 MTR_5g090160 80.549 401 76 2 33 431 30 430 0.0 656
MS.gene019143.t1 MTR_7g110710 51.765 425 198 3 10 431 4 424 1.83e-152 442
MS.gene019143.t1 MTR_7g110710 51.765 425 198 3 10 431 4 424 2.98e-152 441
MS.gene019143.t1 MTR_1g086030 52.246 423 196 2 9 431 46 462 1.27e-149 436
MS.gene019143.t1 MTR_4g120730 49.109 393 197 2 40 431 33 423 6.98e-137 402
MS.gene019143.t1 MTR_2g435340 50.000 394 186 3 43 431 33 420 1.19e-136 401
MS.gene019143.t1 MTR_3g096330 47.484 457 208 6 1 431 8 458 9.40e-135 407
MS.gene019143.t1 MTR_8g098840 50.000 390 193 2 43 431 40 428 1.41e-133 394
MS.gene019143.t1 MTR_1g100060 49.231 390 196 2 43 431 89 477 2.84e-131 390
MS.gene019143.t1 MTR_7g088550 50.255 392 192 3 43 431 46 437 3.16e-131 388
MS.gene019143.t1 MTR_7g078680 47.381 420 219 2 13 431 21 439 7.87e-129 382
MS.gene019143.t1 MTR_1g100050 48.462 390 199 2 43 431 46 434 4.25e-128 380
MS.gene019143.t1 MTR_8g028725 48.974 390 197 2 43 431 51 439 1.73e-127 379
MS.gene019143.t1 MTR_1g086030 50.543 368 166 3 66 431 5 358 5.35e-126 372
MS.gene019143.t1 MTR_4g124980 48.942 378 187 3 36 407 59 436 2.58e-122 366
MS.gene019143.t1 MTR_1g100040 47.436 390 203 2 43 431 52 440 2.76e-122 365
MS.gene019143.t1 MTR_1g099850 46.253 387 206 2 43 428 51 436 1.17e-120 361
MS.gene019143.t1 MTR_2g042740 49.864 367 182 2 43 407 52 418 1.04e-119 358
MS.gene019143.t1 MTR_2g435340 48.896 317 151 3 120 431 45 355 7.61e-106 320
MS.gene019143.t1 MTR_2g083670 48.649 222 99 1 31 252 24 230 5.06e-62 202
MS.gene019143.t1 MTR_5g090140 48.851 174 49 5 260 431 1 136 3.96e-39 139
MS.gene019143.t1 MTR_2g042750 44.444 162 60 5 80 238 148 282 9.70e-29 115
MS.gene019143.t1 MTR_6g005630 28.116 345 199 11 16 350 17 322 4.85e-27 113
MS.gene019143.t1 MTR_6g028080 26.854 391 234 13 38 413 21 374 2.57e-26 110
MS.gene019143.t1 MTR_3g084380 26.486 370 217 13 28 383 5 333 2.72e-24 104
MS.gene019143.t1 MTR_6g048610 37.059 170 69 3 240 408 24 156 3.00e-24 99.4
MS.gene019143.t1 MTR_5g033680 25.185 405 258 10 39 429 51 424 3.12e-23 102
MS.gene019143.t1 MTR_4g084050 29.801 302 172 10 48 341 24 293 5.54e-23 100
MS.gene019143.t1 MTR_5g043350 27.795 331 202 8 34 357 18 318 7.00e-23 100
MS.gene019143.t1 MTR_3g084360 29.085 306 174 10 46 341 23 295 3.68e-22 98.6
MS.gene019143.t1 MTR_8g010080 27.679 336 195 11 12 343 6 297 5.24e-22 97.8
MS.gene019143.t1 MTR_6g005630 27.193 342 183 11 16 350 17 299 1.35e-21 97.1
MS.gene019143.t1 MTR_3g054320 26.846 298 180 9 52 341 35 302 4.76e-20 92.4
MS.gene019143.t1 MTR_4g083660 28.191 376 223 15 44 407 6 346 1.79e-19 90.5
MS.gene019143.t1 MTR_3g030540 25.781 384 243 12 37 410 60 411 2.28e-19 90.5
MS.gene019143.t1 MTR_2g103410 28.135 327 187 10 47 358 59 352 2.53e-19 90.5
MS.gene019143.t1 MTR_8g077320 28.674 279 175 8 140 413 97 356 4.34e-19 89.0
MS.gene019143.t1 MTR_2g060350 25.065 387 232 14 47 414 74 421 1.20e-18 88.6
MS.gene019143.t1 MTR_7g091840 25.071 351 217 13 48 386 66 382 2.88e-18 86.7
MS.gene019143.t1 MTR_1g086390 25.185 405 255 15 47 433 81 455 9.88e-18 85.9
MS.gene019143.t1 MTR_7g092470 25.890 309 189 8 46 341 47 328 1.25e-17 85.5
MS.gene019143.t1 MTR_8g008765 26.623 308 186 9 48 350 32 304 2.20e-17 83.6
MS.gene019143.t1 MTR_1g012390 26.380 326 202 12 33 350 16 311 2.75e-17 84.0
MS.gene019143.t1 MTR_4g094715 26.380 326 199 10 39 350 56 354 4.02e-17 84.0
MS.gene019143.t1 MTR_2g103650 26.452 310 179 10 46 339 27 303 4.44e-17 83.6
MS.gene019143.t1 MTR_1g052315 23.219 379 246 12 46 412 63 408 5.87e-17 83.6
MS.gene019143.t1 MTR_8g065010 23.632 402 234 12 46 408 106 473 6.83e-17 83.6
MS.gene019143.t1 MTR_5g034090 25.146 342 183 13 48 350 122 429 1.22e-16 82.8
MS.gene019143.t1 MTR_7g110050 25.893 336 197 10 30 350 59 357 2.19e-16 81.6
MS.gene019143.t1 MTR_2g049400 27.003 337 190 10 14 340 10 300 3.14e-16 80.9
MS.gene019143.t1 MTR_1g088160 27.812 320 175 11 49 350 37 318 3.29e-16 80.9
MS.gene019143.t1 MTR_8g009810 31.295 278 165 11 148 416 121 381 4.62e-16 80.5
MS.gene019143.t1 MTR_8g010090 26.230 305 178 9 48 343 32 298 4.71e-16 80.1
MS.gene019143.t1 MTR_2g103410 27.586 290 164 9 47 323 59 315 5.89e-16 79.3
MS.gene019143.t1 MTR_7g035415 25.836 329 203 10 34 355 27 321 8.29e-16 79.0
MS.gene019143.t1 MTR_8g008700 30.769 195 113 4 160 350 51 227 2.20e-15 77.0
MS.gene019143.t1 MTR_2g032710 26.887 212 130 4 152 350 157 356 2.33e-15 78.6
MS.gene019143.t1 MTR_8g065030 23.545 378 247 12 47 413 65 411 2.49e-15 78.6
MS.gene019143.t1 MTR_1g013740 27.414 321 189 13 45 360 33 314 6.73e-15 76.6
MS.gene019143.t1 MTR_5g034090 25.316 316 163 13 47 323 121 402 1.78e-14 75.5
MS.gene019143.t1 MTR_7g091850 24.675 308 188 12 47 343 76 350 3.14e-14 75.1
MS.gene019143.t1 MTR_8g010070 26.367 311 185 9 48 350 32 306 3.82e-14 74.3
MS.gene019143.t1 MTR_8g010110 25.633 316 188 11 48 351 32 312 4.51e-14 74.3
MS.gene019143.t1 MTR_1g013730 24.936 393 244 14 45 431 25 372 5.44e-14 73.9
MS.gene019143.t1 MTR_8g010050 25.733 307 170 10 49 345 33 291 6.24e-14 73.6
MS.gene019143.t1 MTR_8g010040 25.313 399 239 15 43 421 28 387 1.21e-13 72.8
MS.gene019143.t1 MTR_0157s0060 27.820 266 162 8 168 426 106 348 4.54e-13 70.9
MS.gene019143.t1 MTR_4g034020 27.820 266 162 8 168 426 106 348 4.54e-13 70.9
MS.gene019143.t1 MTR_8g031180 32.432 185 104 4 201 376 71 243 4.94e-13 69.7
MS.gene019143.t1 MTR_2g435640 25.304 411 235 17 47 430 53 418 5.28e-13 71.2
MS.gene019143.t1 MTR_4g120320 25.078 319 174 10 47 339 52 331 1.99e-12 69.3
MS.gene019143.t1 MTR_3g438050 26.148 283 175 9 45 323 25 277 2.67e-12 68.6
MS.gene019143.t1 MTR_7g113910 25.830 271 139 8 160 425 97 310 2.36e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019143.t1 AT4G23820 76.247 421 96 2 11 431 7 423 0.0 668
MS.gene019143.t1 AT5G41870 69.740 423 124 2 11 432 9 428 0.0 602
MS.gene019143.t1 AT3G62110 52.745 419 195 3 14 431 11 427 2.55e-156 452
MS.gene019143.t1 AT3G62110 52.745 419 195 3 14 431 11 427 2.55e-156 452
MS.gene019143.t1 AT4G33440 53.102 403 181 4 33 431 56 454 4.95e-139 408
MS.gene019143.t1 AT3G16850 47.971 419 213 3 14 431 7 421 4.01e-131 387
MS.gene019143.t1 AT3G48950 45.283 424 226 4 13 431 8 430 8.25e-130 384
MS.gene019143.t1 AT3G61490 48.082 391 201 2 43 432 56 445 1.39e-127 379
MS.gene019143.t1 AT3G61490 48.082 391 201 2 43 432 41 430 1.76e-127 379
MS.gene019143.t1 AT3G61490 48.082 391 201 2 43 432 41 430 1.76e-127 379
MS.gene019143.t1 AT3G61490 48.082 391 201 2 43 432 41 430 1.76e-127 379
MS.gene019143.t1 AT3G61490 48.082 391 201 2 43 432 154 543 7.01e-127 381
MS.gene019143.t1 AT2G23900 44.575 424 228 4 14 431 19 441 6.72e-121 362
MS.gene019143.t1 AT4G23500 46.923 390 205 2 43 431 64 452 3.87e-120 360
MS.gene019143.t1 AT3G42950 47.949 390 200 3 20 407 40 428 6.85e-118 354
MS.gene019143.t1 AT5G49215 45.570 395 206 2 42 431 36 426 4.97e-117 351
MS.gene019143.t1 AT5G49215 45.570 395 206 2 42 431 38 428 7.49e-117 350
MS.gene019143.t1 AT1G19170 48.378 370 188 3 41 407 81 450 9.44e-114 345
MS.gene019143.t1 AT3G06770 45.178 394 205 3 43 431 39 426 1.60e-113 342
MS.gene019143.t1 AT3G06770 45.178 394 205 3 43 431 40 427 1.96e-113 342
MS.gene019143.t1 AT3G06770 44.693 358 187 3 79 431 6 357 1.03e-99 304
MS.gene019143.t1 AT3G06770 44.693 358 187 3 79 431 6 357 1.03e-99 304
MS.gene019143.t1 AT3G06770 42.587 317 171 3 120 431 29 339 5.70e-82 258
MS.gene019143.t1 AT2G41850 28.989 376 223 13 46 409 67 410 6.69e-29 118
MS.gene019143.t1 AT3G15720 30.025 403 220 15 44 428 20 378 1.76e-28 117
MS.gene019143.t1 AT3G15720 30.025 403 220 15 44 428 21 379 1.82e-28 117
MS.gene019143.t1 AT3G15720 30.025 403 217 16 44 428 20 375 1.65e-26 112
MS.gene019143.t1 AT5G17200 31.068 309 173 10 47 350 39 312 1.41e-25 108
MS.gene019143.t1 AT3G15720 31.366 322 172 12 123 428 27 315 3.13e-25 107
MS.gene019143.t1 AT5G14650 26.705 352 220 11 1 343 1 323 6.12e-24 104
MS.gene019143.t1 AT3G57510 25.385 390 247 10 43 420 64 421 1.38e-23 103
MS.gene019143.t1 AT3G57790 28.754 313 181 9 46 341 34 321 2.52e-23 103
MS.gene019143.t1 AT3G57790 28.754 313 181 9 46 341 34 321 2.52e-23 103
MS.gene019143.t1 AT1G56710 25.721 451 279 17 8 433 2 421 5.35e-23 101
MS.gene019143.t1 AT3G26610 25.062 403 246 12 24 412 53 413 2.17e-22 100
MS.gene019143.t1 AT5G14650 26.506 332 206 11 1 323 1 303 7.99e-21 93.6
MS.gene019143.t1 AT1G10640 24.038 416 254 12 44 426 116 502 9.61e-21 95.5
MS.gene019143.t1 AT5G27530 26.316 399 237 13 48 435 54 406 7.53e-20 92.4
MS.gene019143.t1 AT2G43870 27.632 380 214 13 11 383 2 327 9.87e-20 91.3
MS.gene019143.t1 AT1G70500 24.828 435 271 13 4 427 35 424 1.43e-19 91.7
MS.gene019143.t1 AT4G35670 28.354 328 185 10 34 350 15 303 1.55e-19 90.9
MS.gene019143.t1 AT1G60590 23.097 381 222 11 44 385 120 468 2.38e-19 91.3
MS.gene019143.t1 AT3G59850 28.533 375 223 12 44 407 20 360 4.69e-19 89.4
MS.gene019143.t1 AT1G02460 24.938 405 257 12 48 433 90 466 4.94e-19 90.1
MS.gene019143.t1 AT3G59850 28.267 375 224 12 44 407 64 404 5.33e-19 89.7
MS.gene019143.t1 AT4G32375 31.220 205 120 4 150 350 19 206 1.09e-18 88.6
MS.gene019143.t1 AT3G07970 29.386 228 142 4 160 380 167 382 1.63e-18 88.2
MS.gene019143.t1 AT5G44840 26.753 385 246 12 49 428 26 379 2.63e-18 87.0
MS.gene019143.t1 AT4G35670 33.171 205 117 5 150 350 8 196 3.12e-18 85.5
MS.gene019143.t1 AT4G32380 32.735 223 121 7 148 366 116 313 3.93e-18 87.0
MS.gene019143.t1 AT1G23460 24.812 399 254 14 41 427 36 400 5.40e-18 86.7
MS.gene019143.t1 AT1G23460 24.812 399 254 14 41 427 60 424 5.74e-18 86.7
MS.gene019143.t1 AT5G39910 25.893 336 191 10 13 340 10 295 4.44e-17 83.2
MS.gene019143.t1 AT1G48100 22.963 405 264 12 49 436 82 455 1.21e-16 82.8
MS.gene019143.t1 AT2G43890 24.009 429 262 14 15 431 9 385 3.08e-16 80.9
MS.gene019143.t1 AT1G02790 27.778 324 189 11 8 323 15 301 3.19e-16 80.9
MS.gene019143.t1 AT2G43880 27.378 347 212 12 42 381 26 339 3.20e-16 80.9
MS.gene019143.t1 AT2G43880 27.052 329 196 11 42 365 26 315 4.02e-16 79.7
MS.gene019143.t1 AT2G15460 24.505 404 252 12 43 429 27 394 4.99e-16 80.1
MS.gene019143.t1 AT2G26620 24.060 399 258 11 43 429 27 392 6.92e-16 79.7
MS.gene019143.t1 AT5G44830 29.348 276 158 9 160 428 75 320 8.13e-16 79.0
MS.gene019143.t1 AT2G15470 24.257 404 253 12 43 429 27 394 9.36e-16 79.3
MS.gene019143.t1 AT2G15450 24.257 404 253 12 43 429 27 394 2.12e-15 78.6
MS.gene019143.t1 AT1G80140 27.500 240 147 6 148 383 59 275 3.50e-15 77.0
MS.gene019143.t1 AT2G40310 23.929 397 257 12 43 426 27 391 3.54e-15 77.8
MS.gene019143.t1 AT4G32380 34.444 180 97 6 148 323 116 278 3.94e-15 77.8
MS.gene019143.t1 AT4G01890 25.392 319 195 9 49 350 67 359 6.23e-15 77.4
MS.gene019143.t1 AT1G05650 27.652 264 165 8 160 413 122 369 8.35e-15 76.6
MS.gene019143.t1 AT1G80170 22.556 399 255 12 47 428 53 414 1.05e-14 76.6
MS.gene019143.t1 AT1G43080 24.468 376 243 10 43 407 27 372 2.28e-14 75.1
MS.gene019143.t1 AT1G43090 24.747 396 255 12 43 426 27 391 2.42e-14 75.5
MS.gene019143.t1 AT4G32370 31.500 200 113 6 149 339 123 307 2.49e-14 74.7
MS.gene019143.t1 AT1G17150 25.455 385 237 14 43 412 29 378 3.60e-14 74.7
MS.gene019143.t1 AT1G78400 24.060 399 239 12 49 418 37 400 4.72e-14 74.3
MS.gene019143.t1 AT1G05660 27.273 264 166 9 160 413 122 369 9.47e-14 73.2
MS.gene019143.t1 AT1G43100 24.495 396 256 12 43 426 27 391 1.28e-13 73.2
MS.gene019143.t1 AT4G13760 24.611 386 230 14 43 407 27 372 2.38e-13 72.0
MS.gene019143.t1 AT1G65570 26.282 312 196 11 15 323 3 283 6.96e-13 70.5
MS.gene019143.t1 AT4G18180 31.771 192 111 5 160 343 137 316 7.27e-13 70.9
MS.gene019143.t1 AT3G14040 24.478 335 189 9 46 343 70 377 5.43e-12 68.2
MS.gene019143.t1 AT3G07850 23.716 409 242 11 47 424 70 439 4.35e-11 65.1

Find 132 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATTTCCATAACCGATTT+TGG 0.167116 3.3:-36323014 MS.gene019143:CDS
ATTTGAAATAATAATATTTC+TGG 0.187682 3.3:+36319211 None:intergenic
TCGGATTGCTCGGGGCTCTT+TGG 0.194223 3.3:-36317137 MS.gene019143:CDS
CGCTGAACTCAAAGGCATTC+AGG 0.212276 3.3:-36322971 MS.gene019143:CDS
TGTCCGATATGTCACGATTT+TGG 0.231140 3.3:-36318999 MS.gene019143:CDS
CGGATTGCTCGGGGCTCTTT+GGG 0.232788 3.3:-36317136 MS.gene019143:CDS
CATTCAGGGCAGCTATTTAT+AGG 0.235860 3.3:-36322956 MS.gene019143:CDS
TCTTCATTCTTTAGAGGTTA+TGG 0.263528 3.3:-36319981 MS.gene019143:intron
ATTGCACCTTTACCATCTTA+TGG 0.281917 3.3:-36319946 MS.gene019143:CDS
TTCTATGATATAAACCTTCA+TGG 0.298716 3.3:-36318122 MS.gene019143:CDS
TTTATAGGATTCAGCACTTA+AGG 0.299188 3.3:-36322941 MS.gene019143:CDS
TAGAAACAAATCTCAGTAAA+AGG 0.304924 3.3:+36318140 None:intergenic
AGGCAGAGGTAGAAGAGAAA+TGG 0.312906 3.3:+36323087 None:intergenic
GATGGTAAAGGTGCAATTAA+AGG 0.313514 3.3:+36319952 None:intergenic
TTCTTTAGAGGTTATGGAAT+TGG 0.313836 3.3:-36319975 MS.gene019143:intron
TTCACAACTGGTAGAGCATT+AGG 0.314497 3.3:+36318236 None:intergenic
ATGGACTCTAAATTGTTTGC+AGG 0.320256 3.3:-36317085 MS.gene019143:CDS
GAATTACAATTAAGAGTGTT+TGG 0.330158 3.3:-36318211 MS.gene019143:CDS
GGCAGAGGTAGAAGAGAAAT+GGG 0.342583 3.3:+36323088 None:intergenic
AATTACAATTAAGAGTGTTT+GGG 0.348788 3.3:-36318210 MS.gene019143:CDS
GAGGAGGAAAGTGGAGGGGA+TGG 0.356412 3.3:+36323127 None:intergenic
TCACAACTGGTAGAGCATTA+GGG 0.385260 3.3:+36318237 None:intergenic
ATCACGATCCGACGTATAAC+CGG 0.387708 3.3:-36318494 MS.gene019143:CDS
AGGCAAGGAATTAAAATTGC+TGG 0.387934 3.3:-36318293 MS.gene019143:CDS
ACTCCAAGGTTGATATAAAT+CGG 0.396201 3.3:-36317156 MS.gene019143:intron
GGTGAGAATGGAACAATTGA+TGG 0.402464 3.3:-36319314 MS.gene019143:CDS
AGGAAGAGGAGGAAAGTGGA+GGG 0.414601 3.3:+36323122 None:intergenic
CCTACGGCAATGCCGGCAAA+TGG 0.426213 3.3:+36318464 None:intergenic
TTGTTTGCAGGTATTCGAAA+TGG 0.429390 3.3:-36317073 MS.gene019143:CDS
AACAAGGAAGAGGAGGAAAG+TGG 0.430945 3.3:+36323118 None:intergenic
ATGACTCTTTATCTTGCTGC+TGG 0.433521 3.3:-36322846 MS.gene019143:CDS
GTCGCCGACACCGCCAAAAT+CGG 0.438708 3.3:+36323001 None:intergenic
TCATATTCCACAACATGTTC+CGG 0.439214 3.3:-36323065 MS.gene019143:CDS
ATTGTAATTCCCTTCACAAC+TGG 0.439300 3.3:+36318224 None:intergenic
GACACCGCCAAAATCGGTTA+TGG 0.441151 3.3:+36323007 None:intergenic
GGGTCAATTCCATCAGTGTT+AGG 0.443337 3.3:+36318962 None:intergenic
TTGCAAGCTGGTTTGATACA+TGG 0.446222 3.3:-36318176 MS.gene019143:CDS
ACCGGATCGTCTCCATTTGC+CGG 0.454556 3.3:-36318476 MS.gene019143:CDS
GAGCCAAAATCGTGACATAT+CGG 0.457475 3.3:+36318996 None:intergenic
GCTGAACTCAAAGGCATTCA+GGG 0.462123 3.3:-36322970 MS.gene019143:CDS
GAGGACTCATACATATCAAC+AGG 0.465287 3.3:-36318587 MS.gene019143:CDS
ATAAACCTTCATGGTGAGAC+AGG 0.469791 3.3:-36318113 MS.gene019143:CDS
TTCCAATGTTTGTCTTAATG+TGG 0.470222 3.3:+36318369 None:intergenic
ATTAAAATTGCTGGTGATGT+AGG 0.474167 3.3:-36318284 MS.gene019143:CDS
ACACACCAGGAGGCACATAA+AGG 0.475424 3.3:+36322901 None:intergenic
TGATATAAATCGGATTGCTC+GGG 0.484212 3.3:-36317146 MS.gene019143:CDS
CACTATGCCGGAACATGTTG+TGG 0.484354 3.3:+36323058 None:intergenic
CGCGACTCTCCTAACACTGA+TGG 0.487424 3.3:-36318971 MS.gene019143:CDS
TAAGAGTGTTTGGGGTGTGA+AGG 0.492885 3.3:-36318201 MS.gene019143:CDS
AAGGAAGAGGAGGAAAGTGG+AGG 0.492987 3.3:+36323121 None:intergenic
TTCACTGCCTACGGCAATGC+CGG 0.494196 3.3:+36318457 None:intergenic
GCCTCCTGGTGTGTACTTAA+CGG 0.495904 3.3:-36322892 MS.gene019143:CDS
ATGTGTATATAGAAAATTCA+AGG 0.496847 3.3:-36318313 MS.gene019143:CDS
TCCCTTCCTCTTCCATAAGA+TGG 0.498572 3.3:+36319934 None:intergenic
CCTTTACCATCTTATGGAAG+AGG 0.498720 3.3:-36319940 MS.gene019143:CDS
TTGATATAAATCGGATTGCT+CGG 0.501603 3.3:-36317147 MS.gene019143:CDS
AAACTGATATACCTTCCTCC+TGG 0.504242 3.3:+36319907 None:intergenic
GTGTCGGAACGGCACTATGC+CGG 0.505281 3.3:+36323046 None:intergenic
GCCGGCAAATGGAGACGATC+CGG 0.511985 3.3:+36318475 None:intergenic
AGAAATGGGAGAAGAAAACA+AGG 0.513580 3.3:+36323102 None:intergenic
CTTCATGGTGAGACAGGATC+AGG 0.514701 3.3:-36318107 MS.gene019143:CDS
GGGAGAAGAAAACAAGGAAG+AGG 0.515158 3.3:+36323108 None:intergenic
ACCTGATGTTTCACTGCCTA+CGG 0.519201 3.3:+36318448 None:intergenic
ACGCTCCTTTATGTGCCTCC+TGG 0.523955 3.3:-36322906 MS.gene019143:CDS
ATCCACATTAAGACAAACAT+TGG 0.527637 3.3:-36318371 MS.gene019143:CDS
TTGTGGCTGTGAAGAGTGGA+TGG 0.529310 3.3:-36318556 MS.gene019143:CDS
CCATTTGCCGGCATTGCCGT+AGG 0.539892 3.3:-36318464 MS.gene019143:CDS
CCTCTTCCATAAGATGGTAA+AGG 0.544572 3.3:+36319940 None:intergenic
AACCTCTTCAACATGGGAGT+TGG 0.548570 3.3:-36318395 MS.gene019143:CDS
TACCATCTTATGGAAGAGGA+AGG 0.549191 3.3:-36319936 MS.gene019143:CDS
ATTAAGACAAACATTGGAAG+AGG 0.549285 3.3:-36318365 MS.gene019143:CDS
AAATCGTGTCGGCGCGGTGT+CGG 0.549772 3.3:+36323030 None:intergenic
CGGCAAAACGCTGAACTCAA+AGG 0.549793 3.3:-36322979 MS.gene019143:CDS
AGAAGAAAACAAGGAAGAGG+AGG 0.551306 3.3:+36323111 None:intergenic
GCCGTAGGCAGTGAAACATC+AGG 0.551782 3.3:-36318449 MS.gene019143:CDS
GGAAGAGGAGGAAAGTGGAG+GGG 0.552831 3.3:+36323123 None:intergenic
TCGTGATGCCATTGCTAGGA+CGG 0.555883 3.3:+36318510 None:intergenic
TATATAGAAAATTCAAGGCA+AGG 0.561312 3.3:-36318308 MS.gene019143:CDS
CTGATCCTGTCTCACCATGA+AGG 0.563032 3.3:+36318108 None:intergenic
AACTGGATGTATATTCCAGA+AGG 0.565675 3.3:+36319169 None:intergenic
AACTGATATACCTTCCTCCT+GGG 0.566298 3.3:+36319908 None:intergenic
AAGAGTGGATGGGATGAATA+CGG 0.568218 3.3:-36318545 MS.gene019143:CDS
CGGATCGTGATGCCATTGCT+AGG 0.571230 3.3:+36318506 None:intergenic
ATATACATCCAGTTTACTGC+AGG 0.571488 3.3:-36319160 MS.gene019143:intron
TGTTGTGGAATATGAGGCAG+AGG 0.574978 3.3:+36323073 None:intergenic
GTGTCGGCGCGGTGTCGGAA+CGG 0.576004 3.3:+36323035 None:intergenic
TAATGCTCTACCAGTTGTGA+AGG 0.579332 3.3:-36318234 MS.gene019143:CDS
GTTGAAGAGGTTGATATGCT+CGG 0.579619 3.3:+36318406 None:intergenic
ATTACAATTAAGAGTGTTTG+GGG 0.579707 3.3:-36318209 MS.gene019143:CDS
CTCTCCGTTAAGTACACACC+AGG 0.580616 3.3:+36322888 None:intergenic
TGCTGTTATTAAAGCCACAC+AGG 0.582451 3.3:-36322823 MS.gene019143:intron
CATATCAACCTCTTCAACAT+GGG 0.583118 3.3:-36318401 MS.gene019143:CDS
GTTCGCGATGTGATCATCAC+AGG 0.583823 3.3:-36319868 MS.gene019143:intron
GAAGGGAGCTCCCAGGAGGA+AGG 0.586526 3.3:-36319918 MS.gene019143:CDS
AAGTTCAAATGTCTGCATAG+AGG 0.586689 3.3:-36318606 MS.gene019143:CDS
GGAACATGTTGTGGAATATG+AGG 0.586776 3.3:+36323067 None:intergenic
GCATATCAACCTCTTCAACA+TGG 0.588468 3.3:-36318402 MS.gene019143:CDS
TGGTGATGTAGGTGACCATC+CGG 0.592460 3.3:-36318273 MS.gene019143:CDS
TACCAACTCCCATGTTGAAG+AGG 0.592901 3.3:+36318393 None:intergenic
AATGGAACAATTGATGGGCA+AGG 0.593507 3.3:-36319308 MS.gene019143:CDS
ACCATCTTATGGAAGAGGAA+GGG 0.599680 3.3:-36319935 MS.gene019143:CDS
GGAAGAGGAAGGGAGCTCCC+AGG 0.601338 3.3:-36319925 MS.gene019143:CDS
GATGAATACGGTATTTCATA+CGG 0.605569 3.3:-36318533 MS.gene019143:CDS
ATCGGTTATGGAAATCGTGT+CGG 0.606548 3.3:+36323019 None:intergenic
TCATACGGCCGTCCTAGCAA+TGG 0.608461 3.3:-36318518 MS.gene019143:CDS
GTGAGAATGGAACAATTGAT+GGG 0.611373 3.3:-36319313 MS.gene019143:CDS
GATATAAATCGGATTGCTCG+GGG 0.611587 3.3:-36317145 MS.gene019143:CDS
AAGACAAACATTGGAAGAGG+AGG 0.612632 3.3:-36318362 MS.gene019143:CDS
GATCTTGTGGCTGTGAAGAG+TGG 0.616644 3.3:-36318560 MS.gene019143:CDS
GAGATGTATGGTGGAACATG+TGG 0.617873 3.3:-36319286 MS.gene019143:CDS
AATGCTCTACCAGTTGTGAA+GGG 0.623141 3.3:-36318233 MS.gene019143:CDS
AAAACATCAGAACACTTCCA+AGG 0.628023 3.3:+36318074 None:intergenic
TAATGCAAAGAAGCTTGCAG+AGG 0.635926 3.3:+36317050 None:intergenic
ATCAACAGGAGATGATCTTG+TGG 0.639297 3.3:-36318573 MS.gene019143:CDS
GATCAGGTAGATCTCCACCT+TGG 0.642012 3.3:-36318091 MS.gene019143:CDS
TTGATGGGCAAGGAGATGTA+TGG 0.649620 3.3:-36319298 MS.gene019143:CDS
AACACTGATGGAATTGACCC+AGG 0.651883 3.3:-36318959 MS.gene019143:intron
ACTGGATGTATATTCCAGAA+GGG 0.663404 3.3:+36319170 None:intergenic
ATGTATGGTGGAACATGTGG+AGG 0.680192 3.3:-36319283 MS.gene019143:CDS
AAAATAGCAATAAACCTGTG+TGG 0.687799 3.3:+36322809 None:intergenic
ACATCAGAACACTTCCAAGG+TGG 0.689498 3.3:+36318077 None:intergenic
ATGGGCAAGGAGATGTATGG+TGG 0.690153 3.3:-36319295 MS.gene019143:CDS
CATCGCGAACTCCATCGCCG+TGG 0.694091 3.3:+36319881 None:intergenic
TGTGGCTGTGAAGAGTGGAT+GGG 0.695217 3.3:-36318555 MS.gene019143:CDS
AGAGGAAGGGAGCTCCCAGG+AGG 0.696203 3.3:-36319922 MS.gene019143:CDS
TTATGGAAATCGTGTCGGCG+CGG 0.702772 3.3:+36323024 None:intergenic
TCCGTTAAGTACACACCAGG+AGG 0.707120 3.3:+36322891 None:intergenic
ATTCAGCACTTAAGGAGACG+TGG 0.715137 3.3:-36322933 MS.gene019143:CDS
GAGACGATCCGGTTATACGT+CGG 0.721010 3.3:+36318486 None:intergenic
GTAGGCAGTGAAACATCAGG+TGG 0.722766 3.3:-36318446 MS.gene019143:CDS
CAGCACTTAAGGAGACGTGG+TGG 0.748468 3.3:-36322930 MS.gene019143:CDS
TCAGTGTTAGGAGAGTCGCG+AGG 0.797208 3.3:+36318974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATAATTACTAAATT+TGG + chr3.3:36319621-36319640 None:intergenic 10.0%
!! AAAGAATAATTACTAAATTT+GGG + chr3.3:36319620-36319639 None:intergenic 10.0%
!! ATCTAAATTACTTTAAATTA+TGG + chr3.3:36318537-36318556 None:intergenic 10.0%
!! TCTAAATTACTTTAAATTAT+GGG + chr3.3:36318536-36318555 None:intergenic 10.0%
!!! AATAATTGTAACATATTTTT+TGG - chr3.3:36319815-36319834 MS.gene019143:intron 10.0%
!!! ACAAATTTAATAATTTTTCT+AGG - chr3.3:36318067-36318086 MS.gene019143:CDS 10.0%
!!! ATTTGAAATAATAATATTTC+TGG + chr3.3:36320977-36320996 None:intergenic 10.0%
!!! CAAATTTAATAATTTTTCTA+GGG - chr3.3:36318068-36318087 MS.gene019143:CDS 10.0%
!! AAAGTAATTGAAAATTTGTA+AGG - chr3.3:36317805-36317824 MS.gene019143:intron 15.0%
!! AATAAAAATAAAAACTATGG+TGG - chr3.3:36318685-36318704 MS.gene019143:intron 15.0%
!! ATAAAAATAAAAACTATGGT+GGG - chr3.3:36318686-36318705 MS.gene019143:intron 15.0%
!! ATATAAAAAATACAAGTCAA+AGG + chr3.3:36318158-36318177 None:intergenic 15.0%
!! ATTAGGAAGAAAAAATAAAA+AGG + chr3.3:36317428-36317447 None:intergenic 15.0%
!! ATTTAAATTAATGGAGAATA+AGG - chr3.3:36319394-36319413 MS.gene019143:intron 15.0%
!! GAAAAATTATTAAATTTGTG+TGG + chr3.3:36318066-36318085 None:intergenic 15.0%
!! TATATATATATAGTAAACCA+AGG + chr3.3:36321342-36321361 None:intergenic 15.0%
!! TATCATTACTCATATTATAA+TGG + chr3.3:36318276-36318295 None:intergenic 15.0%
!! TTAGGAAGAAAAAATAAAAA+GGG + chr3.3:36317427-36317446 None:intergenic 15.0%
!!! AAAATATTGTTTTTTGACAT+AGG - chr3.3:36319031-36319050 MS.gene019143:intron 15.0%
!!! AAAGTTTTGAATTACATTTT+AGG + chr3.3:36321142-36321161 None:intergenic 15.0%
!!! ATGAATCTAAAATGTTTTAT+TGG - chr3.3:36320627-36320646 MS.gene019143:intron 15.0%
!!! ATTCTTTCAATAATTTGTTT+AGG - chr3.3:36320780-36320799 MS.gene019143:intron 15.0%
!!! ATTTAAAACTTACCATTTAA+AGG - chr3.3:36319689-36319708 MS.gene019143:intron 15.0%
!!! TAATTTTTTTAGATGCTATT+TGG + chr3.3:36320579-36320598 None:intergenic 15.0%
!!! TGAATCTAAAATGTTTTATT+GGG - chr3.3:36320628-36320647 MS.gene019143:intron 15.0%
!!! TTTAAAACTTACCATTTAAA+GGG - chr3.3:36319690-36319709 MS.gene019143:intron 15.0%
!! AAAAAACAAAAATGCATCAT+AGG - chr3.3:36321103-36321122 MS.gene019143:intron 20.0%
!! AAAAAATGAATACAGAACAT+TGG + chr3.3:36320714-36320733 None:intergenic 20.0%
!! AAAAACAAAAATGCATCATA+GGG - chr3.3:36321104-36321123 MS.gene019143:intron 20.0%
!! AAATTAATGTTGAAGTGATA+AGG - chr3.3:36319360-36319379 MS.gene019143:intron 20.0%
!! AACGTTAATACTACTAAATT+AGG + chr3.3:36317445-36317464 None:intergenic 20.0%
!! ATGTGTATATAGAAAATTCA+AGG - chr3.3:36321872-36321891 MS.gene019143:intron 20.0%
!! GACTTAATGTAAAAGATTAT+GGG - chr3.3:36319556-36319575 MS.gene019143:intron 20.0%
!! GTGAATAGTTTATATAAGAT+GGG + chr3.3:36318511-36318530 None:intergenic 20.0%
!! TATAAAAATAAGAGTGAATG+AGG + chr3.3:36320851-36320870 None:intergenic 20.0%
!! TATTAACTCAATATATATCC+TGG + chr3.3:36318574-36318593 None:intergenic 20.0%
!! TCTATCTTATACTACTAAAT+TGG - chr3.3:36322916-36322935 MS.gene019143:CDS 20.0%
!! TGAATAGTTTATATAAGATG+GGG + chr3.3:36318510-36318529 None:intergenic 20.0%
!! TGTGAATAGTTTATATAAGA+TGG + chr3.3:36318512-36318531 None:intergenic 20.0%
!! TTTAAATCCACACAAAAATT+AGG + chr3.3:36320039-36320058 None:intergenic 20.0%
!!! AAGATCATTTATCTAAGTTT+TGG + chr3.3:36321309-36321328 None:intergenic 20.0%
!!! AATTACAATTAAGAGTGTTT+GGG - chr3.3:36321975-36321994 MS.gene019143:intron 20.0%
!!! AATTTGTAAGGATTTTTTCT+AGG - chr3.3:36317817-36317836 MS.gene019143:intron 20.0%
!!! AGATTCATTTTAGTATAGTT+GGG + chr3.3:36320615-36320634 None:intergenic 20.0%
!!! ATCACTTCAACATTAATTTT+TGG + chr3.3:36319359-36319378 None:intergenic 20.0%
!!! ATTTGTAAGGATTTTTTCTA+GGG - chr3.3:36317818-36317837 MS.gene019143:intron 20.0%
!!! CAACATTAATTTTTGGTTTT+TGG + chr3.3:36319352-36319371 None:intergenic 20.0%
!!! CTTTTTTGAGAAAAAAATGA+GGG - chr3.3:36319531-36319550 MS.gene019143:intron 20.0%
!!! GATTGTGTACATTTTTTATT+GGG + chr3.3:36317504-36317523 None:intergenic 20.0%
!!! TAGATTCATTTTAGTATAGT+TGG + chr3.3:36320616-36320635 None:intergenic 20.0%
!!! TCATTCACTCTTATTTTTAT+AGG - chr3.3:36320850-36320869 MS.gene019143:intron 20.0%
!!! TCTTTTTTGAGAAAAAAATG+AGG - chr3.3:36319530-36319549 MS.gene019143:intron 20.0%
!!! TGATTGTGTACATTTTTTAT+TGG + chr3.3:36317505-36317524 None:intergenic 20.0%
!!! TTACAAATGTTGACTTTATT+TGG + chr3.3:36321517-36321536 None:intergenic 20.0%
!!! TTTGATTATCAAGTTGAATT+TGG - chr3.3:36318837-36318856 MS.gene019143:intron 20.0%
!!! TTTTTCAAATGGTATTACTA+TGG - chr3.3:36323081-36323100 MS.gene019143:CDS 20.0%
! AAAGATTAGGTTTCATAGAT+TGG + chr3.3:36320826-36320845 None:intergenic 25.0%
! AACATTACACTACCAAATAA+TGG + chr3.3:36320089-36320108 None:intergenic 25.0%
! AACATTTCCCAAAGATTATT+TGG - chr3.3:36319740-36319759 MS.gene019143:intron 25.0%
! AAGTTGTATATTGAATGCAT+TGG + chr3.3:36319666-36319685 None:intergenic 25.0%
! ACAAAAGAAACTGTATAACA+TGG + chr3.3:36318797-36318816 None:intergenic 25.0%
! ACAACTTACTTCAGAATTAT+AGG - chr3.3:36319770-36319789 MS.gene019143:intron 25.0%
! ATACTTGAAGAGAGTAAAAT+CGG + chr3.3:36322412-36322431 None:intergenic 25.0%
! ATTAAGAAACTATGGATTTG+TGG + chr3.3:36322740-36322759 None:intergenic 25.0%
! CAGATATATCAACTATTGTA+AGG + chr3.3:36317638-36317657 None:intergenic 25.0%
! CTAAAACCTTAATATTATGG+CGG - chr3.3:36320538-36320557 MS.gene019143:intron 25.0%
! GGACTTAATGTAAAAGATTA+TGG - chr3.3:36319555-36319574 MS.gene019143:intron 25.0%
! TAAAACCTTAATATTATGGC+GGG - chr3.3:36320539-36320558 MS.gene019143:intron 25.0%
! TAATAGATATGACCAAATTC+TGG + chr3.3:36322715-36322734 None:intergenic 25.0%
! TAGAAACAAATCTCAGTAAA+AGG + chr3.3:36322048-36322067 None:intergenic 25.0%
! TATATAGAAAATTCAAGGCA+AGG - chr3.3:36321877-36321896 MS.gene019143:intron 25.0%
! TGGAATTCAAAAATTCAACA+AGG + chr3.3:36320957-36320976 None:intergenic 25.0%
! TTAGTAGTATAAGATAGAGA+AGG + chr3.3:36322914-36322933 None:intergenic 25.0%
! TTCAAAAATTCAACAAGGTT+TGG + chr3.3:36320952-36320971 None:intergenic 25.0%
! TTCTATGATATAAACCTTCA+TGG - chr3.3:36322063-36322082 MS.gene019143:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr3.3:36318346-36318365 MS.gene019143:CDS 25.0%
! TTGAATTGTCAGTAATATGT+TGG + chr3.3:36322271-36322290 None:intergenic 25.0%
! TTTAACAATGTACTAGTTAG+TGG - chr3.3:36318226-36318245 MS.gene019143:CDS 25.0%
! TTTCATGAGTCATATTTACA+TGG + chr3.3:36318891-36318910 None:intergenic 25.0%
! TTTGACCATGCATTATTTAA+AGG + chr3.3:36318618-36318637 None:intergenic 25.0%
!! ATCAAAGAGTACAACAATAA+TGG + chr3.3:36318823-36318842 None:intergenic 25.0%
!! TAAAATCCCATATTTGGAAT+AGG - chr3.3:36319961-36319980 MS.gene019143:CDS 25.0%
!! TGTTATACAGTTTCTTTTGT+TGG - chr3.3:36318797-36318816 MS.gene019143:intron 25.0%
!! TTAGGGTTAAATTTTTCATC+CGG + chr3.3:36321934-36321953 None:intergenic 25.0%
!! TTTTCTCCACATTTCTATTT+GGG + chr3.3:36319915-36319934 None:intergenic 25.0%
!! TTTTTCTCCACATTTCTATT+TGG + chr3.3:36319916-36319935 None:intergenic 25.0%
!!! AGATTTTTTTAGAGATAACC+AGG - chr3.3:36318553-36318572 MS.gene019143:CDS 25.0%
!!! ATTACAATTAAGAGTGTTTG+GGG - chr3.3:36321976-36321995 MS.gene019143:intron 25.0%
!!! CCATAATATTAAGGTTTTAG+AGG + chr3.3:36320538-36320557 None:intergenic 25.0%
!!! CCTCTAAAACCTTAATATTA+TGG - chr3.3:36320535-36320554 MS.gene019143:intron 25.0%
!!! CTTATTTTTATAGGTGAGAA+TGG - chr3.3:36320859-36320878 MS.gene019143:intron 25.0%
!!! GAATTACAATTAAGAGTGTT+TGG - chr3.3:36321974-36321993 MS.gene019143:intron 25.0%
!!! GGTTTAGTTTGTTTTTCAAA+TGG - chr3.3:36323070-36323089 MS.gene019143:CDS 25.0%
!!! TGTTTTTGGATTTTCACAAA+AGG - chr3.3:36322128-36322147 MS.gene019143:intron 25.0%
!!! TTCTATTTTTCTGCTATCAA+AGG - chr3.3:36319314-36319333 MS.gene019143:CDS 25.0%
AAAACAATGGAGAGAGAAAA+AGG - chr3.3:36318359-36318378 MS.gene019143:CDS 30.0%
AAAATAGCAATAAACCTGTG+TGG + chr3.3:36317379-36317398 None:intergenic 30.0%
AAATTCCCGCCATAATATTA+AGG + chr3.3:36320547-36320566 None:intergenic 30.0%
AACTTATTGTCTCAGAAGTT+AGG - chr3.3:36321403-36321422 MS.gene019143:intron 30.0%
AAGTTCTATCAGTATTTACC+TGG + chr3.3:36321247-36321266 None:intergenic 30.0%
AATAAGAAGTGGGAAAAACA+AGG + chr3.3:36318334-36318353 None:intergenic 30.0%
AATAAGCCCAAATAGAAATG+TGG - chr3.3:36319906-36319925 MS.gene019143:CDS 30.0%
AATCCGATTTATATCAACCT+TGG + chr3.3:36323035-36323054 None:intergenic 30.0%
ACAGAACATTGGATCAATTA+TGG + chr3.3:36320703-36320722 None:intergenic 30.0%
ACATATCGCTCATGAATAAT+TGG + chr3.3:36322205-36322224 None:intergenic 30.0%
AGAGTAAAATCGGTAATTTC+AGG + chr3.3:36322402-36322421 None:intergenic 30.0%
AGTTCTATCAGTATTTACCT+GGG + chr3.3:36321246-36321265 None:intergenic 30.0%
ATCCACATTAAGACAAACAT+TGG - chr3.3:36321814-36321833 MS.gene019143:intron 30.0%
ATGCTCCTTTAAATAATGCA+TGG - chr3.3:36318610-36318629 MS.gene019143:CDS 30.0%
ATGTACTAGTTAGTGGTATT+TGG - chr3.3:36318233-36318252 MS.gene019143:CDS 30.0%
ATTAAGACAAACATTGGAAG+AGG - chr3.3:36321820-36321839 MS.gene019143:intron 30.0%
CATAAATTGTGAGAGTCAAA+TGG - chr3.3:36322577-36322596 MS.gene019143:intron 30.0%
CGAGTATAAATAAATGATCG+AGG - chr3.3:36318030-36318049 MS.gene019143:intron 30.0%
CTAGACTAAAATCCCATATT+TGG - chr3.3:36319955-36319974 MS.gene019143:CDS 30.0%
CTGCAAACTATATGGAAAAT+CGG + chr3.3:36319153-36319172 None:intergenic 30.0%
GAGATATGAACTAGAAAATC+AGG + chr3.3:36320368-36320387 None:intergenic 30.0%
GATGAATACGGTATTTCATA+CGG - chr3.3:36321652-36321671 MS.gene019143:intron 30.0%
GCAGGTAAAAATATGATGTA+TGG - chr3.3:36321043-36321062 MS.gene019143:intron 30.0%
GTTAGTTAAAGATTGAAGCT+TGG + chr3.3:36322770-36322789 None:intergenic 30.0%
TAATATTGCAGCAAAATGTG+AGG - chr3.3:36320448-36320467 MS.gene019143:intron 30.0%
TATGTGTTGTGACCATTATT+TGG - chr3.3:36320074-36320093 MS.gene019143:intron 30.0%
TCGTACCATAAATCATTTGA+GGG - chr3.3:36319502-36319521 MS.gene019143:intron 30.0%
TGACTGTTAATTATTGTTGC+AGG + chr3.3:36319183-36319202 None:intergenic 30.0%
TGTGTGGATTTAAATGTGAT+TGG - chr3.3:36320045-36320064 MS.gene019143:intron 30.0%
TTCCAATGTTTGTCTTAATG+TGG + chr3.3:36321819-36321838 None:intergenic 30.0%
TTCCTTTCTTCATTCTTTAG+AGG - chr3.3:36320198-36320217 MS.gene019143:intron 30.0%
TTCTGGTCCAAATAATCTTT+GGG + chr3.3:36319750-36319769 None:intergenic 30.0%
TTGATATAAATCGGATTGCT+CGG - chr3.3:36323038-36323057 MS.gene019143:CDS 30.0%
TTGTTTATAACGATGACAAG+AGG - chr3.3:36317710-36317729 MS.gene019143:intron 30.0%
TTTATAGGATTCAGCACTTA+AGG - chr3.3:36317244-36317263 MS.gene019143:intron 30.0%
! AACCTCTAAAGAATGAAGAA+AGG + chr3.3:36320203-36320222 None:intergenic 30.0%
! ATCTAAGCCTAATTTTTGTG+TGG - chr3.3:36320029-36320048 MS.gene019143:intron 30.0%
! ATTAAAATTGCTGGTGATGT+AGG - chr3.3:36321901-36321920 MS.gene019143:intron 30.0%
! GACTACTGATTAAGAAACTA+TGG + chr3.3:36322748-36322767 None:intergenic 30.0%
! GTTTTTGACCAATAAGAAGT+GGG + chr3.3:36318344-36318363 None:intergenic 30.0%
! TCTTCATTCTTTAGAGGTTA+TGG - chr3.3:36320204-36320223 MS.gene019143:intron 30.0%
! TGTAAGGTTGAGTTTGAAAT+AGG + chr3.3:36317622-36317641 None:intergenic 30.0%
! TTCTTTAGAGGTTATGGAAT+TGG - chr3.3:36320210-36320229 MS.gene019143:intron 30.0%
! TTTCTGGTCCAAATAATCTT+TGG + chr3.3:36319751-36319770 None:intergenic 30.0%
!! ACTCCAAGGTTGATATAAAT+CGG - chr3.3:36323029-36323048 MS.gene019143:CDS 30.0%
!! AGCATGCAATTTTCTTGTTT+TGG + chr3.3:36320659-36320678 None:intergenic 30.0%
!! AGGTATATCAGTTTTATCCA+CGG - chr3.3:36320287-36320306 MS.gene019143:intron 30.0%
!! ATTCTGAAGTAAGTTGTTTC+TGG + chr3.3:36319767-36319786 None:intergenic 30.0%
!! TATTTTTACCTGCAGTAAAC+TGG + chr3.3:36321036-36321055 None:intergenic 30.0%
!! TGTTTTTGACCAATAAGAAG+TGG + chr3.3:36318345-36318364 None:intergenic 30.0%
!! TTGTTTTTCCCACTTCTTAT+TGG - chr3.3:36318333-36318352 MS.gene019143:CDS 30.0%
!! TTTTGAGAAAAAAATGAGGG+TGG - chr3.3:36319534-36319553 MS.gene019143:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr3.3:36318431-36318450 None:intergenic 30.0%
!!! TAAGTTTTGAGCTAGATTTC+AGG + chr3.3:36321274-36321293 None:intergenic 30.0%
AAAACATCAGAACACTTCCA+AGG + chr3.3:36322114-36322133 None:intergenic 35.0%
AACTGGATGTATATTCCAGA+AGG + chr3.3:36321019-36321038 None:intergenic 35.0%
AAGTTCAAATGTCTGCATAG+AGG - chr3.3:36321579-36321598 MS.gene019143:intron 35.0%
ACTGGATGTATATTCCAGAA+GGG + chr3.3:36321018-36321037 None:intergenic 35.0%
AGAAATGGGAGAAGAAAACA+AGG + chr3.3:36317086-36317105 None:intergenic 35.0%
AGCATATTGTCCTGTCAATT+TGG - chr3.3:36322984-36323003 MS.gene019143:CDS 35.0%
AGGCAAGGAATTAAAATTGC+TGG - chr3.3:36321892-36321911 MS.gene019143:intron 35.0%
AGTCCTCCTATTCCAAATAT+GGG + chr3.3:36319970-36319989 None:intergenic 35.0%
AGTGAATGAGGAGAAAGATT+AGG + chr3.3:36320839-36320858 None:intergenic 35.0%
ATATACATCCAGTTTACTGC+AGG - chr3.3:36321025-36321044 MS.gene019143:intron 35.0%
ATGGACTCTAAATTGTTTGC+AGG - chr3.3:36323100-36323119 MS.gene019143:CDS 35.0%
ATGTGTGTGAGTGTATACAA+GGG + chr3.3:36318976-36318995 None:intergenic 35.0%
ATTACCTGAATGAATGGAAG+TGG + chr3.3:36322890-36322909 None:intergenic 35.0%
ATTGCACCTTTACCATCTTA+TGG - chr3.3:36320239-36320258 MS.gene019143:intron 35.0%
ATTGTAATTCCCTTCACAAC+TGG + chr3.3:36321964-36321983 None:intergenic 35.0%
CAAACTATATGGAAAATCGG+TGG + chr3.3:36319150-36319169 None:intergenic 35.0%
CACTCTTTAAGCCCTTTAAA+TGG + chr3.3:36319704-36319723 None:intergenic 35.0%
CATATCAACCTCTTCAACAT+GGG - chr3.3:36321784-36321803 MS.gene019143:intron 35.0%
CATGAAAGGACTAAAATCAG+TGG - chr3.3:36318715-36318734 MS.gene019143:intron 35.0%
CTCTTCAGAAAGTAGTTTAG+AGG - chr3.3:36321485-36321504 MS.gene019143:intron 35.0%
GAAGGAATTACCTGAATGAA+TGG + chr3.3:36322896-36322915 None:intergenic 35.0%
GAATTGTGCTGTCTTTGTTA+TGG - chr3.3:36319092-36319111 MS.gene019143:intron 35.0%
GATTTATATCAACCTTGGAG+TGG + chr3.3:36323030-36323049 None:intergenic 35.0%
GGAGAGTGATAACAAGTTTA+AGG - chr3.3:36317839-36317858 MS.gene019143:intron 35.0%
GTCAGTAGAGTTATCAAACT+TGG - chr3.3:36319199-36319218 MS.gene019143:CDS 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr3.3:36318426-36318445 MS.gene019143:CDS 35.0%
GTCGTACCATAAATCATTTG+AGG - chr3.3:36319501-36319520 MS.gene019143:intron 35.0%
GTGAGAATGGAACAATTGAT+GGG - chr3.3:36320872-36320891 MS.gene019143:intron 35.0%
GTGGATTTAAATGTGATTGG+AGG - chr3.3:36320048-36320067 MS.gene019143:intron 35.0%
GTTTCATAGATTGGTACACT+TGG + chr3.3:36320817-36320836 None:intergenic 35.0%
TACCATAAATCATTTGAGGG+TGG - chr3.3:36319505-36319524 MS.gene019143:intron 35.0%
TAGTCCTCCTATTCCAAATA+TGG + chr3.3:36319971-36319990 None:intergenic 35.0%
TATTAACGATTTCTTCGTGC+CGG - chr3.3:36322329-36322348 MS.gene019143:intron 35.0%
TCATATTCCACAACATGTTC+CGG - chr3.3:36317120-36317139 MS.gene019143:CDS 35.0%
TGATATAAATCGGATTGCTC+GGG - chr3.3:36323039-36323058 MS.gene019143:CDS 35.0%
TTGTTTGCAGGTATTCGAAA+TGG - chr3.3:36323112-36323131 MS.gene019143:CDS 35.0%
! AATCCCATATTTGGAATAGG+AGG - chr3.3:36319964-36319983 MS.gene019143:CDS 35.0%
! AGGTATTGCTAATTGAGCTT+AGG + chr3.3:36317574-36317593 None:intergenic 35.0%
! AGTTAGTGGTATTTGGAATG+CGG - chr3.3:36318240-36318259 MS.gene019143:CDS 35.0%
! GATGGTAAAGGTGCAATTAA+AGG + chr3.3:36320236-36320255 None:intergenic 35.0%
! GATGTCTAGCTTAGCAATAT+AGG + chr3.3:36317594-36317613 None:intergenic 35.0%
! GGTTAAATTTTTCATCCGGA+TGG + chr3.3:36321930-36321949 None:intergenic 35.0%
! TAACGCTACAGTGTTTTCAA+AGG + chr3.3:36319242-36319261 None:intergenic 35.0%
! TTTCACAAAAGGTTAGTCCT+TGG - chr3.3:36322139-36322158 MS.gene019143:intron 35.0%
!! ACGATTTCCATAACCGATTT+TGG - chr3.3:36317171-36317190 MS.gene019143:intron 35.0%
!! ATTTCCATAACCGATTTTGG+CGG - chr3.3:36317174-36317193 MS.gene019143:intron 35.0%
!! ATTTTAGTCCTTTCATGCTC+AGG + chr3.3:36318712-36318731 None:intergenic 35.0%
!! TTTTCAAGAATTCTCCCTTC+TGG - chr3.3:36321001-36321020 MS.gene019143:intron 35.0%
!!! TGGAAGTGTTCTGATGTTTT+TGG - chr3.3:36322114-36322133 MS.gene019143:intron 35.0%
AAACTGATATACCTTCCTCC+TGG + chr3.3:36320281-36320300 None:intergenic 40.0%
AACTGATATACCTTCCTCCT+GGG + chr3.3:36320280-36320299 None:intergenic 40.0%
AAGACAAACATTGGAAGAGG+AGG - chr3.3:36321823-36321842 MS.gene019143:intron 40.0%
AAGAGTGGATGGGATGAATA+CGG - chr3.3:36321640-36321659 MS.gene019143:intron 40.0%
AATCACCCTCAACATGTACA+CGG + chr3.3:36322544-36322563 None:intergenic 40.0%
AATCGGTAATTTCAGGACTC+AGG + chr3.3:36322395-36322414 None:intergenic 40.0%
AATGCTCTACCAGTTGTGAA+GGG - chr3.3:36321952-36321971 MS.gene019143:intron 40.0%
ACCATCTTATGGAAGAGGAA+GGG - chr3.3:36320250-36320269 MS.gene019143:intron 40.0%
AGAAGAAAACAAGGAAGAGG+AGG + chr3.3:36317077-36317096 None:intergenic 40.0%
ATAAACCTTCATGGTGAGAC+AGG - chr3.3:36322072-36322091 MS.gene019143:intron 40.0%
ATATGGAAAATCGGTGGAAG+CGG + chr3.3:36319144-36319163 None:intergenic 40.0%
ATCAACAGGAGATGATCTTG+TGG - chr3.3:36321612-36321631 MS.gene019143:intron 40.0%
ATCGGTTATGGAAATCGTGT+CGG + chr3.3:36317169-36317188 None:intergenic 40.0%
ATGACTCTTTATCTTGCTGC+TGG - chr3.3:36317339-36317358 MS.gene019143:intron 40.0%
ATTCACCAAAGCCTGTACTA+CGG - chr3.3:36319262-36319281 MS.gene019143:CDS 40.0%
CAAACCACTTCCATTCATTC+AGG - chr3.3:36322883-36322902 MS.gene019143:CDS 40.0%
CAACTTAGAACCATACTCAC+TGG + chr3.3:36320392-36320411 None:intergenic 40.0%
CAGCAAAATGTGAGGAAATG+TGG - chr3.3:36320456-36320475 MS.gene019143:intron 40.0%
CAGTTTCACAACCACTATTG+TGG + chr3.3:36320506-36320525 None:intergenic 40.0%
CATGTGTGTGAGTGTATACA+AGG + chr3.3:36318977-36318996 None:intergenic 40.0%
CATTCAGGGCAGCTATTTAT+AGG - chr3.3:36317229-36317248 MS.gene019143:intron 40.0%
CCTCTTCCATAAGATGGTAA+AGG + chr3.3:36320248-36320267 None:intergenic 40.0%
CCTTTACCATCTTATGGAAG+AGG - chr3.3:36320245-36320264 MS.gene019143:intron 40.0%
GAAAGGACTAAAATCAGTGG+TGG - chr3.3:36318718-36318737 MS.gene019143:intron 40.0%
GAATAATTGGTACAAGACCC+AGG + chr3.3:36322192-36322211 None:intergenic 40.0%
GAGCAACACTGCAAACTATA+TGG + chr3.3:36319161-36319180 None:intergenic 40.0%
GAGCCAAAATCGTGACATAT+CGG + chr3.3:36321192-36321211 None:intergenic 40.0%
GAGGACTCATACATATCAAC+AGG - chr3.3:36321598-36321617 MS.gene019143:intron 40.0%
GATATAAATCGGATTGCTCG+GGG - chr3.3:36323040-36323059 MS.gene019143:CDS 40.0%
GCATATCAACCTCTTCAACA+TGG - chr3.3:36321783-36321802 MS.gene019143:intron 40.0%
GGAACATGTTGTGGAATATG+AGG + chr3.3:36317121-36317140 None:intergenic 40.0%
GGTGAGAATGGAACAATTGA+TGG - chr3.3:36320871-36320890 MS.gene019143:intron 40.0%
GTAGAGTTATCAAACTTGGC+AGG - chr3.3:36319203-36319222 MS.gene019143:CDS 40.0%
GTCCACCCTCAAATGATTTA+TGG + chr3.3:36319510-36319529 None:intergenic 40.0%
TAATGCAAAGAAGCTTGCAG+AGG + chr3.3:36323138-36323157 None:intergenic 40.0%
TAATGCTCTACCAGTTGTGA+AGG - chr3.3:36321951-36321970 MS.gene019143:intron 40.0%
TACCATCTTATGGAAGAGGA+AGG - chr3.3:36320249-36320268 MS.gene019143:intron 40.0%
TCATATCTCACCAGTGAGTA+TGG - chr3.3:36320379-36320398 MS.gene019143:intron 40.0%
TGCTGTTATTAAAGCCACAC+AGG - chr3.3:36317362-36317381 MS.gene019143:intron 40.0%
TGGAGAATAAGGACGAAAGA+TGG - chr3.3:36319405-36319424 MS.gene019143:intron 40.0%
TTTACAAACCCGATGAGTGA+TGG - chr3.3:36322679-36322698 MS.gene019143:intron 40.0%
! AATGGAACAATTGATGGGCA+AGG - chr3.3:36320877-36320896 MS.gene019143:intron 40.0%
! TCACAACTGGTAGAGCATTA+GGG + chr3.3:36321951-36321970 None:intergenic 40.0%
! TCCTGTCAATTTGGTTTCAC+CGG - chr3.3:36322993-36323012 MS.gene019143:CDS 40.0%
! TGTCCGATATGTCACGATTT+TGG - chr3.3:36321186-36321205 MS.gene019143:intron 40.0%
! TTCACAACTGGTAGAGCATT+AGG + chr3.3:36321952-36321971 None:intergenic 40.0%
!! AATAGTATCGGCCACAATAG+TGG - chr3.3:36320492-36320511 MS.gene019143:intron 40.0%
!! ATGGTTCTAAGTTGTGGATC+TGG - chr3.3:36320398-36320417 MS.gene019143:intron 40.0%
!! GTGAGTATGGTTCTAAGTTG+TGG - chr3.3:36320392-36320411 MS.gene019143:intron 40.0%
!! GTTGAAGAGGTTGATATGCT+CGG + chr3.3:36321782-36321801 None:intergenic 40.0%
!! TTGCAAGCTGGTTTGATACA+TGG - chr3.3:36322009-36322028 MS.gene019143:intron 40.0%
AACAAGGAAGAGGAGGAAAG+TGG + chr3.3:36317070-36317089 None:intergenic 45.0%
AACACCGTAACCAAGTCATG+CGG - chr3.3:36322792-36322811 MS.gene019143:intron 45.0%
AACACTGATGGAATTGACCC+AGG - chr3.3:36321226-36321245 MS.gene019143:intron 45.0%
AACCTCTTCAACATGGGAGT+TGG - chr3.3:36321790-36321809 MS.gene019143:intron 45.0%
ACATCAGAACACTTCCAAGG+TGG + chr3.3:36322111-36322130 None:intergenic 45.0%
ACCTGATGTTTCACTGCCTA+CGG + chr3.3:36321740-36321759 None:intergenic 45.0%
ACTAGTTGAACCGCATGACT+TGG + chr3.3:36322805-36322824 None:intergenic 45.0%
AGGACTAAAATCAGTGGTGG+TGG - chr3.3:36318721-36318740 MS.gene019143:intron 45.0%
AGGCAGAGGTAGAAGAGAAA+TGG + chr3.3:36317101-36317120 None:intergenic 45.0%
ATACACCGTAGTACAGGCTT+TGG + chr3.3:36319270-36319289 None:intergenic 45.0%
ATACAGACACCGAACACAAC+AGG + chr3.3:36322358-36322377 None:intergenic 45.0%
ATCACGATCCGACGTATAAC+CGG - chr3.3:36321691-36321710 MS.gene019143:intron 45.0%
ATTCAGCACTTAAGGAGACG+TGG - chr3.3:36317252-36317271 MS.gene019143:intron 45.0%
CAACAACATTGCTGCAACGA+AGG + chr3.3:36321168-36321187 None:intergenic 45.0%
CGATACTATTGTGACCGCAT+CGG + chr3.3:36320482-36320501 None:intergenic 45.0%
CGATGCGGTCACAATAGTAT+CGG - chr3.3:36320480-36320499 MS.gene019143:intron 45.0%
CTTAGCCGTGTACATGTTGA+GGG - chr3.3:36322536-36322555 MS.gene019143:intron 45.0%
GAATAAGGACGAAAGATGGC+TGG - chr3.3:36319409-36319428 MS.gene019143:intron 45.0%
GCTAAAGCAACTCGTGCAAA+TGG + chr3.3:36318954-36318973 None:intergenic 45.0%
GGAAATGTTAACGAGTGCCT+CGG + chr3.3:36319729-36319748 None:intergenic 45.0%
GGACTAAAATCAGTGGTGGT+GGG - chr3.3:36318722-36318741 MS.gene019143:intron 45.0%
GGCAGAGGTAGAAGAGAAAT+GGG + chr3.3:36317100-36317119 None:intergenic 45.0%
GGGAGAAGAAAACAAGGAAG+AGG + chr3.3:36317080-36317099 None:intergenic 45.0%
GGGTCAATTCCATCAGTGTT+AGG + chr3.3:36321226-36321245 None:intergenic 45.0%
GGTTCTTTCTTTCCACTCCA+AGG - chr3.3:36323015-36323034 MS.gene019143:CDS 45.0%
GTGGTTGTGAAACTGTTGTG+CGG - chr3.3:36320511-36320530 MS.gene019143:intron 45.0%
TACCAACTCCCATGTTGAAG+AGG + chr3.3:36321795-36321814 None:intergenic 45.0%
TCCCTTCCTCTTCCATAAGA+TGG + chr3.3:36320254-36320273 None:intergenic 45.0%
TGAGACATACACCGTAGTAC+AGG + chr3.3:36319276-36319295 None:intergenic 45.0%
TGGAGTGGAAAGAAAGAACC+CGG + chr3.3:36323015-36323034 None:intergenic 45.0%
TGTTGTGGAATATGAGGCAG+AGG + chr3.3:36317115-36317134 None:intergenic 45.0%
! ATGTATGGTGGAACATGTGG+AGG - chr3.3:36320902-36320921 MS.gene019143:intron 45.0%
! CCTGTCAATTTGGTTTCACC+GGG - chr3.3:36322994-36323013 MS.gene019143:CDS 45.0%
! GAGATGTATGGTGGAACATG+TGG - chr3.3:36320899-36320918 MS.gene019143:intron 45.0%
! GCACTGACACTTCAGATTGA+AGG - chr3.3:36322226-36322245 MS.gene019143:intron 45.0%
! TTGATGGGCAAGGAGATGTA+TGG - chr3.3:36320887-36320906 MS.gene019143:intron 45.0%
!! ATAACCGATTTTGGCGGTGT+CGG - chr3.3:36317180-36317199 MS.gene019143:intron 45.0%
!! ATCAGTTTTATCCACGGCGA+TGG - chr3.3:36320293-36320312 MS.gene019143:intron 45.0%
!! GCTGAACTCAAAGGCATTCA+GGG - chr3.3:36317215-36317234 MS.gene019143:intron 45.0%
!! TAAGAGTGTTTGGGGTGTGA+AGG - chr3.3:36321984-36322003 MS.gene019143:intron 45.0%
!! TGAACCGCATGACTTGGTTA+CGG + chr3.3:36322799-36322818 None:intergenic 45.0%
!! AAAAATAAAAATAAAAACTA+TGG - chr3.3:36318682-36318701 MS.gene019143:intron 5.0%
!! TAAATTATCATTTAAATTAA+TGG - chr3.3:36319385-36319404 MS.gene019143:intron 5.0%
!! TATATATATATATATATGTT+TGG - chr3.3:36321366-36321385 MS.gene019143:intron 5.0%
AAACCCGATGAGTGATGGTC+AGG - chr3.3:36322684-36322703 MS.gene019143:intron 50.0%
AAGGAAGAGGAGGAAAGTGG+AGG + chr3.3:36317067-36317086 None:intergenic 50.0%
AGGAAGAGGAGGAAAGTGGA+GGG + chr3.3:36317066-36317085 None:intergenic 50.0%
ATGCGGTTCAACTAGTGACC+TGG - chr3.3:36322809-36322828 MS.gene019143:intron 50.0%
ATGGGCAAGGAGATGTATGG+TGG - chr3.3:36320890-36320909 MS.gene019143:intron 50.0%
CAACATGTACACGGCTAAGG+AGG + chr3.3:36322535-36322554 None:intergenic 50.0%
CACTATGCCGGAACATGTTG+TGG + chr3.3:36317130-36317149 None:intergenic 50.0%
CCCGGTGAAACCAAATTGAC+AGG + chr3.3:36322997-36323016 None:intergenic 50.0%
CCTCAACATGTACACGGCTA+AGG + chr3.3:36322538-36322557 None:intergenic 50.0%
CCTTAGCCGTGTACATGTTG+AGG - chr3.3:36322535-36322554 MS.gene019143:intron 50.0%
CGGCAAAACGCTGAACTCAA+AGG - chr3.3:36317206-36317225 MS.gene019143:intron 50.0%
CGGCTAAGGAGGTGATTCAT+TGG + chr3.3:36322524-36322543 None:intergenic 50.0%
CTAGTGACCTGGGGTCTTTA+CGG - chr3.3:36322820-36322839 MS.gene019143:intron 50.0%
CTCTCCGTTAAGTACACACC+AGG + chr3.3:36317300-36317319 None:intergenic 50.0%
CTGATCCTGTCTCACCATGA+AGG + chr3.3:36322080-36322099 None:intergenic 50.0%
CTGGGGTCTTTACGGTTCAA+CGG - chr3.3:36322828-36322847 MS.gene019143:CDS 50.0%
CTTCATGGTGAGACAGGATC+AGG - chr3.3:36322078-36322097 MS.gene019143:intron 50.0%
GACACCGCCAAAATCGGTTA+TGG + chr3.3:36317181-36317200 None:intergenic 50.0%
GAGACGATCCGGTTATACGT+CGG + chr3.3:36321702-36321721 None:intergenic 50.0%
GATCAGGTAGATCTCCACCT+TGG - chr3.3:36322094-36322113 MS.gene019143:intron 50.0%
GATCTTGTGGCTGTGAAGAG+TGG - chr3.3:36321625-36321644 MS.gene019143:intron 50.0%
GCCTCCTGGTGTGTACTTAA+CGG - chr3.3:36317293-36317312 MS.gene019143:intron 50.0%
GCGATGTGATCATCACAGGT+AGG - chr3.3:36320321-36320340 MS.gene019143:intron 50.0%
GGTCTTTACGGTTCAACGGA+GGG - chr3.3:36322832-36322851 MS.gene019143:CDS 50.0%
GTAGGCAGTGAAACATCAGG+TGG - chr3.3:36321739-36321758 MS.gene019143:intron 50.0%
GTCTTTACGGTTCAACGGAG+GGG - chr3.3:36322833-36322852 MS.gene019143:CDS 50.0%
GTTCGCGATGTGATCATCAC+AGG - chr3.3:36320317-36320336 MS.gene019143:intron 50.0%
TCCGTTAAGTACACACCAGG+AGG + chr3.3:36317297-36317316 None:intergenic 50.0%
TCGTGATGCCATTGCTAGGA+CGG + chr3.3:36321678-36321697 None:intergenic 50.0%
TGCGGTTCAACTAGTGACCT+GGG - chr3.3:36322810-36322829 MS.gene019143:intron 50.0%
TGTGGCTGTGAAGAGTGGAT+GGG - chr3.3:36321630-36321649 MS.gene019143:intron 50.0%
TTGTGGCTGTGAAGAGTGGA+TGG - chr3.3:36321629-36321648 MS.gene019143:intron 50.0%
! ACACACCAGGAGGCACATAA+AGG + chr3.3:36317287-36317306 None:intergenic 50.0%
! AGGGCTTAAAGAGTGTACCG+AGG - chr3.3:36319709-36319728 MS.gene019143:intron 50.0%
! GGTGTGAAGGTTTTGCAAGC+TGG - chr3.3:36321997-36322016 MS.gene019143:intron 50.0%
! TGGTGATGTAGGTGACCATC+CGG - chr3.3:36321912-36321931 MS.gene019143:intron 50.0%
! TTATGGAAATCGTGTCGGCG+CGG + chr3.3:36317164-36317183 None:intergenic 50.0%
!! AAATCAGTGGTGGTGGGTCT+TGG - chr3.3:36318728-36318747 MS.gene019143:intron 50.0%
!! CGCTGAACTCAAAGGCATTC+AGG - chr3.3:36317214-36317233 MS.gene019143:intron 50.0%
AAATCGGTGGAAGCGGTTGG+TGG + chr3.3:36319137-36319156 None:intergenic 55.0%
ACCGGATCGTCTCCATTTGC+CGG - chr3.3:36321709-36321728 MS.gene019143:intron 55.0%
ACGCTCCTTTATGTGCCTCC+TGG - chr3.3:36317279-36317298 MS.gene019143:intron 55.0%
CACCGAACACAACAGGACAC+CGG + chr3.3:36322351-36322370 None:intergenic 55.0%
CAGCACTTAAGGAGACGTGG+TGG - chr3.3:36317255-36317274 MS.gene019143:intron 55.0%
CCACCTGACCATCACTCATC+GGG + chr3.3:36322690-36322709 None:intergenic 55.0%
CCCACCTGACCATCACTCAT+CGG + chr3.3:36322691-36322710 None:intergenic 55.0%
CCGATGAGTGATGGTCAGGT+GGG - chr3.3:36322688-36322707 MS.gene019143:intron 55.0%
CGCGACTCTCCTAACACTGA+TGG - chr3.3:36321214-36321233 MS.gene019143:intron 55.0%
CGGATCGTGATGCCATTGCT+AGG + chr3.3:36321682-36321701 None:intergenic 55.0%
CGTTGAACCGTAAAGACCCC+AGG + chr3.3:36322830-36322849 None:intergenic 55.0%
CTCAGCTGAGAACATGGCCA+AGG + chr3.3:36322159-36322178 None:intergenic 55.0%
GCCGTAGGCAGTGAAACATC+AGG - chr3.3:36321736-36321755 MS.gene019143:intron 55.0%
GCGGTTCAACTAGTGACCTG+GGG - chr3.3:36322811-36322830 MS.gene019143:intron 55.0%
GGAAAATCGGTGGAAGCGGT+TGG + chr3.3:36319140-36319159 None:intergenic 55.0%
GGAAGAGGAGGAAAGTGGAG+GGG + chr3.3:36317065-36317084 None:intergenic 55.0%
GGGTCTTTACGGTTCAACGG+AGG - chr3.3:36322831-36322850 MS.gene019143:CDS 55.0%
GGTCAGGTGGGTCCAGAATT+TGG - chr3.3:36322700-36322719 MS.gene019143:intron 55.0%
GTGAGGAAATGTGGCCGATG+CGG - chr3.3:36320465-36320484 MS.gene019143:intron 55.0%
TCAGTGTTAGGAGAGTCGCG+AGG + chr3.3:36321214-36321233 None:intergenic 55.0%
TCATACGGCCGTCCTAGCAA+TGG - chr3.3:36321667-36321686 MS.gene019143:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG - chr3.3:36319579-36319598 MS.gene019143:intron 55.0%
TGCCGGTGTCCTGTTGTGTT+CGG - chr3.3:36322346-36322365 MS.gene019143:intron 55.0%
TGGCTGCTCAGCTGAGAACA+TGG + chr3.3:36322165-36322184 None:intergenic 55.0%
TGGTACAAGACCCAGGCTCT+TGG + chr3.3:36322185-36322204 None:intergenic 55.0%
TTCACTGCCTACGGCAATGC+CGG + chr3.3:36321731-36321750 None:intergenic 55.0%
TTTACGGTTCAACGGAGGGG+AGG - chr3.3:36322836-36322855 MS.gene019143:CDS 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG - chr3.3:36319578-36319597 MS.gene019143:intron 55.0%
!! ATGCTTAAAGAGTGCCCCGG+GGG + chr3.3:36319597-36319616 None:intergenic 55.0%
!! ATGGTGGGCCTGAGCATGAA+AGG - chr3.3:36318701-36318720 MS.gene019143:intron 55.0%
!! GATGCTTAAAGAGTGCCCCG+GGG + chr3.3:36319598-36319617 None:intergenic 55.0%
!! GGATGCTTAAAGAGTGCCCC+GGG + chr3.3:36319599-36319618 None:intergenic 55.0%
!! GGGATGCTTAAAGAGTGCCC+CGG + chr3.3:36319600-36319619 None:intergenic 55.0%
AGCTGAGCAGCCAAGAGCCT+GGG - chr3.3:36322172-36322191 MS.gene019143:intron 60.0%
CCATTTGCCGGCATTGCCGT+AGG - chr3.3:36321721-36321740 MS.gene019143:intron 60.0%
CCCGATGAGTGATGGTCAGG+TGG - chr3.3:36322687-36322706 MS.gene019143:intron 60.0%
CCTACGGCAATGCCGGCAAA+TGG + chr3.3:36321724-36321743 None:intergenic 60.0%
CGGATTGCTCGGGGCTCTTT+GGG - chr3.3:36323049-36323068 MS.gene019143:CDS 60.0%
CTTGTTAACGAGTGCCCCCG+GGG - chr3.3:36319580-36319599 MS.gene019143:intron 60.0%
GAGGAGGAAAGTGGAGGGGA+TGG + chr3.3:36317061-36317080 None:intergenic 60.0%
GCCGGCAAATGGAGACGATC+CGG + chr3.3:36321713-36321732 None:intergenic 60.0%
GGTTCAACGGAGGGGAGGAA+CGG - chr3.3:36322841-36322860 MS.gene019143:CDS 60.0%
GTCGCCGACACCGCCAAAAT+CGG + chr3.3:36317187-36317206 None:intergenic 60.0%
GTGTCGGAACGGCACTATGC+CGG + chr3.3:36317142-36317161 None:intergenic 60.0%
TCGGATTGCTCGGGGCTCTT+TGG - chr3.3:36323048-36323067 MS.gene019143:CDS 60.0%
! AAATCGTGTCGGCGCGGTGT+CGG + chr3.3:36317158-36317177 None:intergenic 60.0%
!! GTGGTGGGTCTTGGTCTGCA+TGG - chr3.3:36318737-36318756 MS.gene019143:intron 60.0%
!!! GATTTTGGCGGTGTCGGCGA+CGG - chr3.3:36317186-36317205 MS.gene019143:intron 60.0%
AGAGGAAGGGAGCTCCCAGG+AGG - chr3.3:36320263-36320282 MS.gene019143:intron 65.0%
CAGCTGAGCAGCCAAGAGCC+TGG - chr3.3:36322171-36322190 MS.gene019143:intron 65.0%
CATCGCGAACTCCATCGCCG+TGG + chr3.3:36320307-36320326 None:intergenic 65.0%
GAAGGGAGCTCCCAGGAGGA+AGG - chr3.3:36320267-36320286 MS.gene019143:intron 65.0%
GGAAGAGGAAGGGAGCTCCC+AGG - chr3.3:36320260-36320279 MS.gene019143:intron 65.0%
! GTGTCGGCGCGGTGTCGGAA+CGG + chr3.3:36317153-36317172 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 36317036 36323171 36317036 ID=MS.gene019143
chr3.3 mRNA 36317036 36323171 36317036 ID=MS.gene019143.t1;Parent=MS.gene019143
chr3.3 exon 36322824 36323171 36322824 ID=MS.gene019143.t1.exon1;Parent=MS.gene019143.t1
chr3.3 CDS 36322824 36323171 36322824 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
chr3.3 exon 36319869 36319989 36319869 ID=MS.gene019143.t1.exon2;Parent=MS.gene019143.t1
chr3.3 CDS 36319869 36319989 36319869 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
chr3.3 exon 36319161 36319335 36319161 ID=MS.gene019143.t1.exon3;Parent=MS.gene019143.t1
chr3.3 CDS 36319161 36319335 36319161 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
chr3.3 exon 36318960 36319030 36318960 ID=MS.gene019143.t1.exon4;Parent=MS.gene019143.t1
chr3.3 CDS 36318960 36319030 36318960 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
chr3.3 exon 36318058 36318632 36318058 ID=MS.gene019143.t1.exon5;Parent=MS.gene019143.t1
chr3.3 CDS 36318058 36318632 36318058 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
chr3.3 exon 36317036 36317170 36317036 ID=MS.gene019143.t1.exon6;Parent=MS.gene019143.t1
chr3.3 CDS 36317036 36317170 36317036 ID=cds.MS.gene019143.t1;Parent=MS.gene019143.t1
Gene Sequence

>MS.gene019143

ATGCATCTTCTCTCAAAATCTTCCATCCCCTCCACTTTCCTCCTCTTCCTTGTTTTCTTCTCCCATTTCTCTTCTACCTCTGCCTCATATTCCACAACATGTTCCGGCATAGTGCCGTTCCGACACCGCGCCGACACGATTTCCATAACCGATTTTGGCGGTGTCGGCGACGGCAAAACGCTGAACTCAAAGGCATTCAGGGCAGCTATTTATAGGATTCAGCACTTAAGGAGACGTGGTGGCACGCTCCTTTATGTGCCTCCTGGTGTGTACTTAACGGAGAGCTTCAATCTCACTAGTCATATGACTCTTTATCTTGCTGCTGGTGCTGTTATTAAAGCCACACAGGTTTATTGCTATTTTCATTCTTTGCTATTTTCTTATTATTCCCTTTTTATTTTTTCTTCCTAATTTAGTAGTATTAACGTTCTTTGTAATATAAAATTTTGCAGTTTAATTTTGATGCCCAATAAAAAATGTACACAATCAAAGAAAATTATAATGTGATTTTAAAAATAATTATTAGTTTGTAACACCTAAGCTCAATTAGCAATACCTATATTGCTAAGCTAGACATCTTCAACCTATTTCAAACTCAACCTTACAATAGTTGATATATCTGATTAATTTAATTTTGATATGTCAGTTGTTCAATAAATCTGAACAAAATATATTTGTTTATAACGATGACAAGAGGAAATGTTTATTACATAATATTGCAGAAAAAAATATTTAATATAATTAAAGATGTGTTGATGAAGAAATAATTAAAGTAATTGAAAATTTGTAAGGATTTTTTCTAGGGAGAGTGATAACAAGTTTAAGGAATTAAATTTTTTTTTTGAAGAATGCAAGAATTTTCTCTGTGAACAAAATAAATGCAAGAATTTTTTTTGAAGAGTATTCAATATCAGTTGTTCAATAAATCTGAACAAAATATATTTTTTCTATGAAAAATGCAAGATTTTTTTTTTGAAGAGTATTCAATATTTATCGAGTATAAATAAATGATCGAGGAGTTTCTGTGCCACACAAATTTAATAATTTTTCTAGGGAGAGTGATAACAAGTTTAAGGAATTAAAATAAGAAATTCTTTATAAAAAAATGTTGTAATTATTCCTTTGACTTGTATTTTTTATATAAATTTTATTAATTCATTCGTTAAACAATGTACTTTTGTTTAATTTTTTTTAACAATGTACTAGTTAGTGGTATTTGGAATGCGGAAAATCGACTCCATTATAATATGAGTAATGATATTTTGACATTCATTTGATGACAACTTTGTTGACAACCTTGTTTTTCCCACTTCTTATTGGTCAAAAACAATGGAGAGAGAAAAAGGAAGAGAGAGTATAACAATATCATGTGAGTATGAGAGAGAAAGTTGTCCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTTATAATATATAGTAATTGTTTTGCATAAAATTTCATTCCCCATCTTATATAAACTATTCACAACCCATAATTTAAAGTAATTTAGATTTTTTTAGAGATAACCAGGATATATATTGAGTTAATATGCATGTGTGTTATATATGCTCCTTTAAATAATGCATGGTCAAAAATAAGACTATAGATAATGTGTTGTCGAAAACAGCTCATTCATTAAAAATAAAAATAAAAACTATGGTGGGCCTGAGCATGAAAGGACTAAAATCAGTGGTGGTGGGTCTTGGTCTGCATGGTTGCATGTGAATGTTATCACAGCATTAACAATTTCCATGTTATACAGTTTCTTTTGTTGGCCATTATTGTTGTACTCTTTGATTATCAAGTTGAATTTGGATATTGCTTTATTTTGCTTGTGATTTTACCATGTAAATATGACTCATGAAATATAAAGAGTAGTGCTATATAGTGCGACAATTTTGTCGCACCATTTGCACGAGTTGCTTTAGCCCTTGTATACACTCACACACATGATGCTGTTTATCAATTATTTGACAAAAGTAAACTAAAATATTGTTTTTTGACATAGGTAAAATAAATAATAAACTAAATTTTTGTTTCACAATATGAATTGTGCTGTCTTTGTTATGGATTTACTACAAAATATTATCCACCAACCGCTTCCACCGATTTTCCATATAGTTTGCAGTGTTGCTCCTGCAACAATAATTAACAGTCAGTAGAGTTATCAAACTTGGCAGGTTACATGTATCATCCTTTGAAAACACTGTAGCGTTAATTCACCAAAGCCTGTACTACGGTGTATGTCTCACACAGAACAACATAGTCATTCTATTTTTCTGCTATCAAAGGCAAGTGCAGTAACCAAAAACCAAAAATTAATGTTGAAGTGATAAGGACTAAATTATCATTTAAATTAATGGAGAATAAGGACGAAAGATGGCTGGAATTGAACTTTAAGAAAGAGAGAAATTGAACAAGAAATCAGCAATCGTGCAAATTGTACGACAAATGTTGTCGTACCATAAATCATTTGAGGGTGGACTCTTTTTTGAGAAAAAAATGAGGGTGGACTTAATGTAAAAGATTATGGGTCTTGTTAACGAGTGCCCCCGGGGCACTCTTTAAGCATCCCAAATTTAGTAATTATTCTTTTAAAAAGTCAACTATTACAATTTCCAATGCATTCAATATACAACTTTTCATTTAAAACTTACCATTTAAAGGGCTTAAAGAGTGTACCGAGGCACTCGTTAACATTTCCCAAAGATTATTTGGACCAGAAACAACTTACTTCAGAATTATAGGTTTACATTCGATGAATCATAAAAATAATTGTAACATATTTTTTGGTTCAAATTAGCAATGTCACATAATCAAATCTAATTCTACATCATTAATAAAAATGAGATGTCAGAAAAAATAAGCCCAAATAGAAATGTGGAGAAAAATCATAAAACTTGTGAAACTCTAGACTAAAATCCCATATTTGGAATAGGAGGACTAAAATACTCTTTCAGTTAATATAGTGAGATAAACATTGTATCTAAGCCTAATTTTTGTGTGGATTTAAATGTGATTGGAGGAATTATGTGTTGTGACCATTATTTGGTAGTGTAATGTTGATACTTAATCTCAAGTGAATGTTCAAAGTTCAATGTCAATCATCAAAATATCTCTGCTCTTTCTATGTGTTGCTCTTTCTTAATGTTCTTCCTTTCTTCATTCTTTAGAGGTTATGGAATTGGCCTTTAATTGCACCTTTACCATCTTATGGAAGAGGAAGGGAGCTCCCAGGAGGAAGGTATATCAGTTTTATCCACGGCGATGGAGTTCGCGATGTGATCATCACAGGTAGGTACAAATAAATTATTAACTCACCTGATTTTCTAGTTCATATCTCACCAGTGAGTATGGTTCTAAGTTGTGGATCTGGTCGCATGTGTAGTTATATTGCAAACTTTAATATTGCAGCAAAATGTGAGGAAATGTGGCCGATGCGGTCACAATAGTATCGGCCACAATAGTGGTTGTGAAACTGTTGTGCGGACCTCTAAAACCTTAATATTATGGCGGGAATTTAGAACTATGCCAAATAGCATCTAAAAAAATTAGTACATAATAATACCCAACTATACTAAAATGAATCTAAAATGTTTTATTGGGTGTAACCAAAACAAGAAAATTGCATGCTGAAAAAATGTATAATATATAGCCATAATTGATCCAATGTTCTGTATTCATTTTTTTTATCATTCACTTTGAATTATAGAATGACTCTTTATTGTTAATTTAATTCTTTCAATAATTTGTTTAGGAAAAATTAAAACCAAGTGTACCAATCTATGAAACCTAATCTTTCTCCTCATTCACTCTTATTTTTATAGGTGAGAATGGAACAATTGATGGGCAAGGAGATGTATGGTGGAACATGTGGAGGCAGAGAACTCTTCAATTTACAAGACCAAACCTTGTTGAATTTTTGAATTCCAGAAATATTATTATTTCAAATGTTATTTTCAAGAATTCTCCCTTCTGGAATATACATCCAGTTTACTGCAGGTAAAAATATGATGTATGGATTAAAAAATTTGACATCATTTTCATGATAAAAACAAAAAAAACAAAAATGCATCATAGGGATAGAGTCTTTTCCTAAAATGTAATTCAAAACTTTTTTCCTTCGTTGCAGCAATGTTGTTGTCCGATATGTCACGATTTTGGCTCCTCGCGACTCTCCTAACACTGATGGAATTGACCCAGGTAAATACTGATAGAACTTTCTTCCTGAAATCTAGCTCAAAACTTATTAATGTTGATTCCAAAACTTAGATAAATGATCTTTATATTGGCTCCTTGGTTTACTATATATATATATATATATATATATATATATATGTTTGGCTTGACTTATTTTTAACTTATTGTCTCAGAAGTTAGGACAAACAATATTTTTAAGAAATTCTTAATTAAAAAAATGTGATTATCTTTTATAAGAAACTCTTCAGAAAGTAGTTTAGAGGAGTTTTCCAAATAAAGTCAACATTTGTAATCAATCATCTGTAAAATATAATTCATTTATGCATGCAGATTCAAGTTCAAATGTCTGCATAGAGGACTCATACATATCAACAGGAGATGATCTTGTGGCTGTGAAGAGTGGATGGGATGAATACGGTATTTCATACGGCCGTCCTAGCAATGGCATCACGATCCGACGTATAACCGGATCGTCTCCATTTGCCGGCATTGCCGTAGGCAGTGAAACATCAGGTGGAGTACAGAATGTACTCGCCGAGCATATCAACCTCTTCAACATGGGAGTTGGTATCCACATTAAGACAAACATTGGAAGAGGAGGACTTATCAAGAATATAACAATGTCTAATGTGTATATAGAAAATTCAAGGCAAGGAATTAAAATTGCTGGTGATGTAGGTGACCATCCGGATGAAAAATTTAACCCTAATGCTCTACCAGTTGTGAAGGGAATTACAATTAAGAGTGTTTGGGGTGTGAAGGTTTTGCAAGCTGGTTTGATACATGGTTTGAGAAATTCACCTTTTACTGAGATTTGTTTCTATGATATAAACCTTCATGGTGAGACAGGATCAGGTAGATCTCCACCTTGGAAGTGTTCTGATGTTTTTGGATTTTCACAAAAGGTTAGTCCTTGGCCATGTTCTCAGCTGAGCAGCCAAGAGCCTGGGTCTTGTACCAATTATTCATGAGCGATATGTAGCACTGACACTTCAGATTGAAGGTGTGTAAGAGAGTTCGACACCAACATATTACTGACAATTCAACACTTGTAATTGCATACAATCACTTCTATATTTTCAATTATTAACGATTTCTTCGTGCCGGTGTCCTGTTGTGTTCGGTGTCTGTATCAGTGCTTCATGCTCCTGAGTCCTGAAATTACCGATTTTACTCTCTTCAAGTATTTGTATTGTCTAGTGTCAAAAACAAAAGTATTTGTATTGTAATAATTAAGTGCTTATTTTATTTATTTATTTATTTATTATAATCAAAGCCAATGAATCACCTCCTTAGCCGTGTACATGTTGAGGGTGATTTGATGAATACATGCATAAATTGTGAGAGTCAAATGGTTGATTTAGATTCTTTTAAAAAAACATTCAAATCTTAACTTAATCAAGATGACTATTCAATTGTAAATCTTGTCAAAATTTTACAAACCCGATGAGTGATGGTCAGGTGGGTCCAGAATTTGGTCATATCTATTATACCACAAATCCATAGTTTCTTAATCAGTAGTCCAAGCTTCAATCTTTAACTAACATAACACCGTAACCAAGTCATGCGGTTCAACTAGTGACCTGGGGTCTTTACGGTTCAACGGAGGGGAGGAACGGAATTTTCATTACAAATTTTCAAACCACTTCCATTCATTCAGGTAATTCCTTCTCTATCTTATACTACTAAATTGGTCAATTGTAATTATGTCTTGCTTCTAAAATGTAAAATTCTCTAACAGCATATTGTCCTGTCAATTTGGTTTCACCGGGTTCTTTCTTTCCACTCCAAGGTTGATATAAATCGGATTGCTCGGGGCTCTTTGGGTTTAGTTTGTTTTTCAAATGGTATTACTATGGACTCTAAATTGTTTGCAGGTATTCGAAATGGCCTCTGCAAGCTTCTTTGCATTAAAATGTTTCCTTAA
Protein sequence

>MS.gene019143.t1

MHLLSKSSIPSTFLLFLVFFSHFSSTSASYSTTCSGIVPFRHRADTISITDFGGVGDGKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQRLWNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGISYGRPSNGITIRRITGSSPFAGIAVGSETSGGVQNVLAEHINLFNMGVGIHIKTNIGRGGLIKNITMSNVYIENSRQGIKIAGDVGDHPDEKFNPNALPVVKGITIKSVWGVKVLQAGLIHGLRNSPFTEICFYDINLHGETGSGRSPPWKCSDVFGFSQKVDINRIARGSLGLVCFSNGITMDSKLFAGIRNGLCKLLCIKMFP