Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071826.t1 | XP_013444838.1 | 88.5 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 1.10E-203 | 719.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071826.t1 | Q39766 | 44.5 | 389 | 211 | 4 | 6 | 393 | 11 | 395 | 9.2e-95 | 348.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071826.t1 | A0A072TPY4 | 88.5 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 7.8e-204 | 719.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071826 | MS.gene89048 | PPI |
| MS.gene071826 | MS.gene03618 | PPI |
| MS.gene86370 | MS.gene071826 | PPI |
| MS.gene46962 | MS.gene071826 | PPI |
| MS.gene072441 | MS.gene071826 | PPI |
| MS.gene019627 | MS.gene071826 | PPI |
| MS.gene071829 | MS.gene071826 | PPI |
| MS.gene018971 | MS.gene071826 | PPI |
| MS.gene22233 | MS.gene071826 | PPI |
| MS.gene019143 | MS.gene071826 | PPI |
| MS.gene019625 | MS.gene071826 | PPI |
| MS.gene071826 | MS.gene36228 | PPI |
| MS.gene071826 | MS.gene056777 | PPI |
| MS.gene071826 | MS.gene069198 | PPI |
| MS.gene29308 | MS.gene071826 | PPI |
| MS.gene63570 | MS.gene071826 | PPI |
| MS.gene071826 | MS.gene069200 | PPI |
| MS.gene92027 | MS.gene071826 | PPI |
| MS.gene78336 | MS.gene071826 | PPI |
| MS.gene071826 | MS.gene51014 | PPI |
| MS.gene038102 | MS.gene071826 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071826.t1 | MTR_8g030930 | 88.471 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 0.0 | 695 |
| MS.gene071826.t1 | MTR_3g438050 | 63.131 | 396 | 143 | 3 | 1 | 394 | 1 | 395 | 0.0 | 515 |
| MS.gene071826.t1 | MTR_5g063430 | 70.418 | 311 | 87 | 1 | 1 | 311 | 1 | 306 | 3.50e-167 | 470 |
| MS.gene071826.t1 | MTR_1g088160 | 42.216 | 379 | 205 | 7 | 24 | 394 | 34 | 406 | 1.62e-99 | 302 |
| MS.gene071826.t1 | MTR_2g058670 | 37.913 | 393 | 232 | 6 | 6 | 390 | 6 | 394 | 6.16e-97 | 295 |
| MS.gene071826.t1 | MTR_2g058840 | 37.531 | 397 | 226 | 6 | 6 | 390 | 6 | 392 | 2.50e-96 | 294 |
| MS.gene071826.t1 | MTR_2g058640 | 37.755 | 392 | 232 | 6 | 7 | 390 | 7 | 394 | 1.45e-92 | 284 |
| MS.gene071826.t1 | MTR_4g083660 | 40.642 | 374 | 210 | 7 | 25 | 394 | 9 | 374 | 6.98e-90 | 276 |
| MS.gene071826.t1 | MTR_2g049400 | 39.286 | 392 | 224 | 8 | 5 | 394 | 12 | 391 | 7.66e-89 | 274 |
| MS.gene071826.t1 | MTR_2g435640 | 37.766 | 376 | 225 | 6 | 23 | 393 | 51 | 422 | 6.49e-87 | 270 |
| MS.gene071826.t1 | MTR_1g052315 | 40.779 | 385 | 212 | 10 | 8 | 382 | 46 | 424 | 5.53e-86 | 268 |
| MS.gene071826.t1 | MTR_5g097860 | 43.125 | 320 | 176 | 4 | 21 | 337 | 21 | 337 | 6.67e-86 | 265 |
| MS.gene071826.t1 | MTR_7g091850 | 40.793 | 353 | 198 | 7 | 18 | 364 | 69 | 416 | 6.39e-85 | 266 |
| MS.gene071826.t1 | MTR_4g120320 | 36.340 | 377 | 229 | 6 | 23 | 393 | 50 | 421 | 3.82e-82 | 258 |
| MS.gene071826.t1 | MTR_7g091840 | 41.250 | 320 | 177 | 6 | 23 | 335 | 63 | 378 | 3.23e-80 | 251 |
| MS.gene071826.t1 | MTR_6g028080 | 39.024 | 369 | 198 | 9 | 25 | 377 | 30 | 387 | 2.57e-79 | 249 |
| MS.gene071826.t1 | MTR_2g060350 | 38.624 | 378 | 214 | 10 | 24 | 390 | 73 | 443 | 3.65e-79 | 251 |
| MS.gene071826.t1 | MTR_2g103410 | 36.605 | 377 | 226 | 8 | 24 | 393 | 58 | 428 | 5.13e-79 | 250 |
| MS.gene071826.t1 | MTR_4g084050 | 40.533 | 375 | 198 | 9 | 4 | 364 | 2 | 365 | 8.96e-79 | 248 |
| MS.gene071826.t1 | MTR_8g009810 | 36.896 | 393 | 236 | 8 | 5 | 393 | 15 | 399 | 9.66e-79 | 248 |
| MS.gene071826.t1 | MTR_3g030540 | 40.845 | 355 | 199 | 7 | 15 | 364 | 60 | 408 | 1.89e-76 | 243 |
| MS.gene071826.t1 | MTR_8g065030 | 34.133 | 375 | 234 | 7 | 24 | 392 | 64 | 431 | 3.67e-76 | 243 |
| MS.gene071826.t1 | MTR_3g084380 | 40.115 | 349 | 189 | 8 | 25 | 364 | 21 | 358 | 1.26e-74 | 238 |
| MS.gene071826.t1 | MTR_3g054320 | 38.070 | 373 | 200 | 9 | 11 | 366 | 7 | 365 | 1.38e-72 | 232 |
| MS.gene071826.t1 | MTR_3g084360 | 37.931 | 377 | 212 | 9 | 6 | 371 | 3 | 368 | 4.70e-72 | 231 |
| MS.gene071826.t1 | MTR_5g043350 | 37.808 | 365 | 204 | 9 | 4 | 354 | 2 | 357 | 2.02e-71 | 229 |
| MS.gene071826.t1 | MTR_2g029170 | 39.296 | 341 | 195 | 8 | 58 | 394 | 29 | 361 | 1.23e-70 | 226 |
| MS.gene071826.t1 | MTR_8g010110 | 36.364 | 374 | 219 | 6 | 7 | 377 | 13 | 370 | 2.04e-70 | 226 |
| MS.gene071826.t1 | MTR_4g094715 | 33.938 | 386 | 236 | 8 | 24 | 395 | 64 | 444 | 4.57e-70 | 228 |
| MS.gene071826.t1 | MTR_8g010080 | 35.356 | 379 | 223 | 7 | 5 | 377 | 7 | 369 | 6.16e-70 | 225 |
| MS.gene071826.t1 | MTR_8g010070 | 35.156 | 384 | 229 | 8 | 5 | 384 | 11 | 378 | 5.72e-69 | 223 |
| MS.gene071826.t1 | MTR_6g005630 | 35.185 | 378 | 223 | 11 | 5 | 370 | 17 | 384 | 1.17e-68 | 223 |
| MS.gene071826.t1 | MTR_1g086390 | 34.987 | 383 | 229 | 9 | 24 | 391 | 80 | 457 | 4.16e-68 | 223 |
| MS.gene071826.t1 | MTR_5g033680 | 33.943 | 383 | 236 | 9 | 21 | 392 | 55 | 431 | 1.33e-66 | 219 |
| MS.gene071826.t1 | MTR_7g110050 | 34.367 | 387 | 232 | 11 | 24 | 394 | 66 | 446 | 1.98e-66 | 218 |
| MS.gene071826.t1 | MTR_0157s0060 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.03e-66 | 215 |
| MS.gene071826.t1 | MTR_4g034020 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.03e-66 | 215 |
| MS.gene071826.t1 | MTR_2g100040 | 35.376 | 359 | 181 | 6 | 7 | 363 | 8 | 317 | 4.93e-66 | 214 |
| MS.gene071826.t1 | MTR_2g103650 | 32.984 | 382 | 243 | 7 | 5 | 377 | 8 | 385 | 5.27e-66 | 215 |
| MS.gene071826.t1 | MTR_8g010090 | 34.734 | 357 | 214 | 6 | 24 | 377 | 30 | 370 | 3.99e-65 | 213 |
| MS.gene071826.t1 | MTR_8g008765 | 35.694 | 353 | 205 | 6 | 5 | 350 | 7 | 344 | 7.75e-65 | 211 |
| MS.gene071826.t1 | MTR_1g012390 | 32.737 | 391 | 250 | 9 | 6 | 391 | 9 | 391 | 4.03e-61 | 202 |
| MS.gene071826.t1 | MTR_8g010040 | 34.551 | 356 | 213 | 7 | 25 | 377 | 32 | 370 | 6.59e-61 | 202 |
| MS.gene071826.t1 | MTR_5g034090 | 33.244 | 373 | 214 | 8 | 24 | 366 | 120 | 487 | 1.04e-60 | 205 |
| MS.gene071826.t1 | MTR_1g013730 | 32.552 | 384 | 232 | 8 | 6 | 384 | 8 | 369 | 3.11e-59 | 197 |
| MS.gene071826.t1 | MTR_7g035415 | 33.645 | 321 | 188 | 8 | 5 | 310 | 10 | 320 | 5.76e-57 | 190 |
| MS.gene071826.t1 | MTR_1g013740 | 30.808 | 396 | 246 | 8 | 5 | 394 | 15 | 388 | 6.59e-57 | 191 |
| MS.gene071826.t1 | MTR_8g010050 | 40.580 | 276 | 153 | 4 | 5 | 276 | 11 | 279 | 1.29e-56 | 189 |
| MS.gene071826.t1 | MTR_2g103410 | 36.727 | 275 | 167 | 4 | 24 | 292 | 58 | 331 | 1.33e-56 | 189 |
| MS.gene071826.t1 | MTR_8g065010 | 31.367 | 373 | 220 | 8 | 25 | 366 | 107 | 474 | 2.40e-55 | 190 |
| MS.gene071826.t1 | MTR_7g113910 | 35.987 | 314 | 161 | 10 | 85 | 393 | 74 | 352 | 1.37e-54 | 185 |
| MS.gene071826.t1 | MTR_2g032710 | 32.493 | 357 | 221 | 7 | 24 | 366 | 66 | 416 | 1.76e-54 | 187 |
| MS.gene071826.t1 | MTR_6g005630 | 33.069 | 378 | 208 | 13 | 5 | 370 | 17 | 361 | 2.22e-54 | 185 |
| MS.gene071826.t1 | MTR_8g077320 | 34.194 | 310 | 160 | 6 | 15 | 310 | 23 | 302 | 6.54e-48 | 167 |
| MS.gene071826.t1 | MTR_5g034090 | 33.559 | 295 | 166 | 5 | 24 | 288 | 120 | 414 | 8.27e-47 | 165 |
| MS.gene071826.t1 | MTR_8g008700 | 34.375 | 288 | 170 | 5 | 84 | 367 | 14 | 286 | 4.13e-44 | 155 |
| MS.gene071826.t1 | MTR_8g031180 | 31.525 | 295 | 166 | 6 | 85 | 372 | 15 | 280 | 1.44e-35 | 132 |
| MS.gene071826.t1 | MTR_7g072360 | 58.182 | 110 | 24 | 1 | 167 | 276 | 41 | 128 | 3.88e-32 | 118 |
| MS.gene071826.t1 | MTR_7g072370 | 75.806 | 62 | 15 | 0 | 221 | 282 | 1 | 62 | 1.78e-24 | 95.5 |
| MS.gene071826.t1 | MTR_7g078680 | 23.116 | 398 | 264 | 10 | 26 | 391 | 56 | 443 | 9.86e-18 | 85.1 |
| MS.gene071826.t1 | MTR_4g124980 | 23.325 | 403 | 265 | 12 | 24 | 393 | 73 | 464 | 4.70e-17 | 83.2 |
| MS.gene071826.t1 | MTR_2g042740 | 23.325 | 403 | 265 | 13 | 24 | 393 | 55 | 446 | 2.69e-16 | 80.9 |
| MS.gene071826.t1 | MTR_8g098840 | 22.864 | 398 | 265 | 11 | 26 | 391 | 45 | 432 | 3.06e-15 | 77.4 |
| MS.gene071826.t1 | MTR_1g100050 | 23.350 | 394 | 252 | 10 | 27 | 384 | 52 | 431 | 1.11e-14 | 75.9 |
| MS.gene071826.t1 | MTR_8g028725 | 22.892 | 415 | 276 | 11 | 7 | 391 | 43 | 443 | 1.95e-14 | 75.1 |
| MS.gene071826.t1 | MTR_1g100060 | 22.727 | 396 | 252 | 12 | 27 | 384 | 95 | 474 | 3.49e-14 | 74.3 |
| MS.gene071826.t1 | MTR_1g100040 | 23.096 | 394 | 253 | 10 | 27 | 384 | 58 | 437 | 4.41e-13 | 70.9 |
| MS.gene071826.t1 | MTR_1g099850 | 22.500 | 440 | 253 | 12 | 8 | 384 | 22 | 436 | 1.75e-12 | 68.9 |
| MS.gene071826.t1 | MTR_4g120730 | 22.074 | 376 | 241 | 12 | 26 | 364 | 41 | 401 | 1.84e-12 | 68.9 |
| MS.gene071826.t1 | MTR_3g449590 | 23.040 | 421 | 272 | 12 | 15 | 393 | 37 | 447 | 2.78e-12 | 68.2 |
| MS.gene071826.t1 | MTR_5g090160 | 22.328 | 421 | 276 | 13 | 11 | 393 | 28 | 435 | 4.83e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071826.t1 | AT1G78400 | 51.206 | 373 | 181 | 1 | 23 | 395 | 33 | 404 | 1.88e-135 | 393 |
| MS.gene071826.t1 | AT2G15450 | 49.490 | 392 | 193 | 4 | 7 | 394 | 13 | 403 | 1.49e-131 | 384 |
| MS.gene071826.t1 | AT1G17150 | 47.558 | 389 | 201 | 2 | 8 | 394 | 14 | 401 | 5.49e-131 | 382 |
| MS.gene071826.t1 | AT1G43080 | 49.618 | 393 | 189 | 6 | 9 | 394 | 13 | 403 | 3.82e-130 | 380 |
| MS.gene071826.t1 | AT1G43090 | 50.130 | 385 | 185 | 5 | 9 | 387 | 13 | 396 | 1.57e-129 | 380 |
| MS.gene071826.t1 | AT2G15460 | 49.227 | 388 | 192 | 4 | 7 | 390 | 13 | 399 | 1.34e-128 | 376 |
| MS.gene071826.t1 | AT2G33160 | 47.643 | 403 | 200 | 5 | 1 | 393 | 1 | 402 | 1.67e-128 | 384 |
| MS.gene071826.t1 | AT2G15470 | 48.980 | 392 | 195 | 4 | 7 | 394 | 13 | 403 | 2.24e-128 | 375 |
| MS.gene071826.t1 | AT4G13760 | 48.223 | 394 | 195 | 5 | 5 | 394 | 15 | 403 | 1.44e-127 | 373 |
| MS.gene071826.t1 | AT1G43100 | 50.259 | 386 | 183 | 6 | 9 | 387 | 13 | 396 | 2.07e-126 | 372 |
| MS.gene071826.t1 | AT2G40310 | 47.980 | 396 | 200 | 5 | 4 | 394 | 9 | 403 | 2.98e-125 | 367 |
| MS.gene071826.t1 | AT2G26620 | 48.052 | 385 | 197 | 3 | 12 | 394 | 18 | 401 | 9.95e-123 | 361 |
| MS.gene071826.t1 | AT3G07820 | 38.422 | 393 | 235 | 3 | 1 | 393 | 1 | 386 | 1.27e-100 | 304 |
| MS.gene071826.t1 | AT5G48140 | 39.695 | 393 | 225 | 4 | 1 | 393 | 6 | 386 | 1.94e-100 | 304 |
| MS.gene071826.t1 | AT3G07840 | 40.464 | 388 | 220 | 5 | 6 | 393 | 11 | 387 | 9.78e-100 | 302 |
| MS.gene071826.t1 | AT2G43890 | 42.091 | 373 | 204 | 8 | 25 | 394 | 29 | 392 | 1.05e-98 | 299 |
| MS.gene071826.t1 | AT4G18180 | 40.260 | 385 | 214 | 6 | 24 | 393 | 38 | 421 | 1.79e-98 | 300 |
| MS.gene071826.t1 | AT3G07830 | 38.287 | 397 | 231 | 4 | 1 | 393 | 1 | 387 | 4.52e-96 | 293 |
| MS.gene071826.t1 | AT1G05650 | 38.520 | 392 | 232 | 6 | 5 | 394 | 8 | 392 | 3.44e-95 | 290 |
| MS.gene071826.t1 | AT1G80170 | 39.791 | 382 | 218 | 7 | 20 | 394 | 48 | 424 | 1.78e-94 | 290 |
| MS.gene071826.t1 | AT1G05660 | 37.659 | 393 | 236 | 6 | 4 | 394 | 7 | 392 | 9.62e-92 | 281 |
| MS.gene071826.t1 | AT3G14040 | 40.209 | 383 | 223 | 4 | 15 | 395 | 61 | 439 | 2.96e-91 | 282 |
| MS.gene071826.t1 | AT3G07850 | 40.483 | 373 | 216 | 4 | 25 | 395 | 70 | 438 | 2.26e-89 | 277 |
| MS.gene071826.t1 | AT2G43880 | 39.084 | 371 | 218 | 5 | 25 | 394 | 31 | 394 | 4.48e-88 | 272 |
| MS.gene071826.t1 | AT2G43870 | 39.846 | 389 | 219 | 10 | 6 | 390 | 4 | 381 | 5.06e-88 | 271 |
| MS.gene071826.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 21 | 388 | 9.34e-87 | 268 |
| MS.gene071826.t1 | AT3G07970 | 40.053 | 377 | 216 | 7 | 19 | 390 | 65 | 436 | 1.04e-86 | 270 |
| MS.gene071826.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 65 | 432 | 2.62e-86 | 269 |
| MS.gene071826.t1 | AT2G41850 | 39.370 | 381 | 218 | 8 | 15 | 389 | 58 | 431 | 4.14e-85 | 266 |
| MS.gene071826.t1 | AT3G57510 | 40.000 | 375 | 213 | 8 | 8 | 376 | 52 | 420 | 7.54e-85 | 265 |
| MS.gene071826.t1 | AT1G02790 | 36.649 | 382 | 221 | 5 | 1 | 370 | 16 | 388 | 3.92e-83 | 260 |
| MS.gene071826.t1 | AT2G43860 | 40.563 | 355 | 195 | 9 | 25 | 370 | 33 | 380 | 1.25e-79 | 251 |
| MS.gene071826.t1 | AT1G65570 | 36.000 | 400 | 237 | 12 | 5 | 394 | 7 | 397 | 4.09e-75 | 239 |
| MS.gene071826.t1 | AT2G43880 | 41.869 | 289 | 162 | 4 | 25 | 312 | 31 | 314 | 5.23e-75 | 236 |
| MS.gene071826.t1 | AT4G35670 | 36.939 | 379 | 222 | 8 | 23 | 395 | 22 | 389 | 9.66e-75 | 238 |
| MS.gene071826.t1 | AT1G70500 | 33.333 | 375 | 237 | 7 | 24 | 392 | 66 | 433 | 7.00e-74 | 238 |
| MS.gene071826.t1 | AT1G23460 | 33.067 | 375 | 238 | 7 | 24 | 392 | 42 | 409 | 5.46e-72 | 232 |
| MS.gene071826.t1 | AT3G26610 | 36.827 | 353 | 209 | 7 | 24 | 368 | 66 | 412 | 5.71e-72 | 233 |
| MS.gene071826.t1 | AT1G23460 | 33.067 | 375 | 238 | 7 | 24 | 392 | 66 | 433 | 9.97e-72 | 232 |
| MS.gene071826.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 23 | 378 | 2.15e-71 | 231 |
| MS.gene071826.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 24 | 379 | 2.53e-71 | 231 |
| MS.gene071826.t1 | AT5G17200 | 33.411 | 428 | 232 | 9 | 1 | 388 | 1 | 415 | 5.63e-70 | 226 |
| MS.gene071826.t1 | AT1G02460 | 34.625 | 387 | 228 | 10 | 24 | 391 | 88 | 468 | 8.30e-69 | 225 |
| MS.gene071826.t1 | AT3G15720 | 36.512 | 367 | 212 | 8 | 25 | 384 | 23 | 375 | 2.70e-68 | 223 |
| MS.gene071826.t1 | AT5G27530 | 36.963 | 349 | 194 | 8 | 23 | 364 | 51 | 380 | 4.23e-68 | 223 |
| MS.gene071826.t1 | AT5G14650 | 35.714 | 378 | 227 | 12 | 25 | 395 | 51 | 419 | 4.29e-67 | 219 |
| MS.gene071826.t1 | AT1G80170 | 41.509 | 265 | 148 | 4 | 20 | 278 | 48 | 311 | 4.55e-67 | 216 |
| MS.gene071826.t1 | AT4G32380 | 34.080 | 402 | 242 | 9 | 5 | 393 | 3 | 394 | 4.70e-67 | 219 |
| MS.gene071826.t1 | AT5G44840 | 33.081 | 396 | 246 | 8 | 6 | 395 | 8 | 390 | 2.90e-66 | 216 |
| MS.gene071826.t1 | AT4G01890 | 33.516 | 364 | 215 | 11 | 24 | 367 | 64 | 420 | 4.65e-64 | 212 |
| MS.gene071826.t1 | AT1G80140 | 36.232 | 345 | 200 | 8 | 58 | 393 | 2 | 335 | 8.08e-64 | 207 |
| MS.gene071826.t1 | AT1G10640 | 31.000 | 400 | 238 | 7 | 23 | 392 | 117 | 508 | 1.86e-63 | 212 |
| MS.gene071826.t1 | AT1G60590 | 31.467 | 375 | 219 | 7 | 25 | 366 | 123 | 492 | 6.01e-62 | 208 |
| MS.gene071826.t1 | AT1G56710 | 33.161 | 386 | 238 | 8 | 24 | 394 | 47 | 427 | 7.96e-62 | 205 |
| MS.gene071826.t1 | AT1G48100 | 33.427 | 356 | 219 | 8 | 24 | 366 | 79 | 429 | 1.36e-61 | 206 |
| MS.gene071826.t1 | AT3G15720 | 36.308 | 325 | 190 | 6 | 66 | 384 | 2 | 315 | 3.69e-60 | 200 |
| MS.gene071826.t1 | AT4G32375 | 35.417 | 288 | 176 | 3 | 99 | 385 | 8 | 286 | 2.36e-57 | 193 |
| MS.gene071826.t1 | AT4G32370 | 36.923 | 325 | 173 | 12 | 5 | 310 | 11 | 322 | 7.09e-57 | 190 |
| MS.gene071826.t1 | AT5G39910 | 30.456 | 417 | 204 | 8 | 1 | 390 | 6 | 363 | 1.33e-56 | 190 |
| MS.gene071826.t1 | AT4G35670 | 36.519 | 293 | 173 | 5 | 104 | 395 | 2 | 282 | 3.07e-54 | 181 |
| MS.gene071826.t1 | AT5G44830 | 34.405 | 311 | 180 | 6 | 59 | 364 | 10 | 301 | 3.23e-54 | 182 |
| MS.gene071826.t1 | AT4G32380 | 30.500 | 400 | 218 | 8 | 5 | 393 | 3 | 353 | 1.04e-53 | 183 |
| MS.gene071826.t1 | AT5G14650 | 37.066 | 259 | 154 | 7 | 25 | 278 | 51 | 305 | 3.07e-48 | 166 |
| MS.gene071826.t1 | AT1G19170 | 23.342 | 407 | 261 | 12 | 24 | 393 | 86 | 478 | 2.83e-17 | 84.0 |
| MS.gene071826.t1 | AT4G23820 | 24.297 | 391 | 241 | 11 | 15 | 367 | 31 | 404 | 3.60e-17 | 83.2 |
| MS.gene071826.t1 | AT3G48950 | 21.921 | 406 | 261 | 11 | 27 | 393 | 47 | 435 | 2.97e-15 | 77.8 |
| MS.gene071826.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071826.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071826.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071826.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 26 | 448 | 1.17e-14 | 75.9 |
| MS.gene071826.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 124 | 546 | 2.61e-14 | 75.1 |
| MS.gene071826.t1 | AT5G41870 | 22.760 | 413 | 270 | 12 | 15 | 393 | 35 | 432 | 1.31e-13 | 72.4 |
| MS.gene071826.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.77e-13 | 72.0 |
| MS.gene071826.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.77e-13 | 72.0 |
| MS.gene071826.t1 | AT2G23900 | 24.150 | 294 | 200 | 8 | 113 | 393 | 163 | 446 | 9.38e-12 | 67.0 |
| MS.gene071826.t1 | AT4G23500 | 22.362 | 398 | 267 | 11 | 26 | 391 | 69 | 456 | 5.15e-11 | 64.7 |
Find 70 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTCATTTCGTATTATT+TGG | 0.045891 | 8.3:-64376531 | MS.gene071826:CDS |
| ATTCATTTAAGACTGATAAT+TGG | 0.248897 | 8.3:-64377436 | MS.gene071826:CDS |
| TTAAGTATATATGTCCCTTC+TGG | 0.254708 | 8.3:+64377539 | None:intergenic |
| ATCTGTGTTGGGGCTATCAT+TGG | 0.279672 | 8.3:+64376467 | None:intergenic |
| AACACAGATGGTATCAAAAT+AGG | 0.286858 | 8.3:-64376453 | MS.gene071826:CDS |
| TTATCAGTCTTAAATGAATA+TGG | 0.288964 | 8.3:+64377440 | None:intergenic |
| TATCCTCCACTCTAATGTTT+TGG | 0.298712 | 8.3:+64375860 | None:intergenic |
| GATATTAATTTGCGGCCTTC+TGG | 0.303523 | 8.3:-64375841 | MS.gene071826:CDS |
| TCTGTGTTGGGGCTATCATT+GGG | 0.307341 | 8.3:+64376468 | None:intergenic |
| CAATGTGTGTTTATTTGTTA+AGG | 0.321877 | 8.3:-64375800 | MS.gene071826:CDS |
| TACTAGGAATGTTCGAATTT+CGG | 0.331851 | 8.3:-64376358 | MS.gene071826:CDS |
| CTTAAGGAAGTTGTATTTAG+TGG | 0.357373 | 8.3:-64377521 | MS.gene071826:CDS |
| GTTAAGAATTGTACCTTTAG+TGG | 0.375278 | 8.3:-64376252 | MS.gene071826:CDS |
| CCCCTTCTTGCATAAAATAG+TGG | 0.382661 | 8.3:-64375753 | None:intergenic |
| ACGTCCTCCGTGCACCAAAA+AGG | 0.391567 | 8.3:-64376094 | MS.gene071826:intron |
| AAAGTCATTTCGTATTATTT+GGG | 0.397273 | 8.3:-64376530 | MS.gene071826:CDS |
| TGGATGAACTTTAAAATTGA+AGG | 0.400013 | 8.3:-64377485 | MS.gene071826:CDS |
| TTGCTATGCTCTCGGGTACT+AGG | 0.400268 | 8.3:-64376374 | MS.gene071826:CDS |
| CATTGAAAAGCTTGTATTGA+CGG | 0.403752 | 8.3:+64377780 | None:intergenic |
| AATGTGTGTTTATTTGTTAA+GGG | 0.428144 | 8.3:-64375799 | MS.gene071826:CDS |
| ACACAGATGGTATCAAAATA+GGG | 0.438610 | 8.3:-64376452 | MS.gene071826:CDS |
| AGAAGGGACATATATACTTA+AGG | 0.451751 | 8.3:-64377537 | MS.gene071826:CDS |
| TTTGTTAAGGGTGCTAGTTA+TGG | 0.458228 | 8.3:-64375787 | MS.gene071826:CDS |
| GGAATTAGTGTCGGAAGTCT+TGG | 0.461747 | 8.3:-64376312 | MS.gene071826:CDS |
| GTCTCAATTGAAGAAAACTT+TGG | 0.463231 | 8.3:-64376196 | MS.gene071826:CDS |
| TAAGTATATATGTCCCTTCT+GGG | 0.466667 | 8.3:+64377540 | None:intergenic |
| ACCTTTAGTGGCACAAGTAA+TGG | 0.469662 | 8.3:-64376240 | MS.gene071826:CDS |
| ATCAAAATAGGGAGGTCAAA+TGG | 0.473186 | 8.3:-64376441 | MS.gene071826:CDS |
| CTGTGTTGGGGCTATCATTG+GGG | 0.485147 | 8.3:+64376469 | None:intergenic |
| GAAAATTACCACTCTATTGT+CGG | 0.485190 | 8.3:+64377724 | None:intergenic |
| GGTGGAGGTGGCAGATTGGA+TGG | 0.495038 | 8.3:-64377380 | MS.gene071826:CDS |
| GATTGCATTGCTATGCTCTC+GGG | 0.503203 | 8.3:-64376381 | MS.gene071826:CDS |
| TCAAGTGTGAACATTGGAAC+CGG | 0.504301 | 8.3:-64376408 | MS.gene071826:CDS |
| TAATCTTGATCAATGACAAT+GGG | 0.504846 | 8.3:+64376123 | None:intergenic |
| ATGGTCAAGGATCTTCTGCT+TGG | 0.509723 | 8.3:-64377361 | MS.gene071826:CDS |
| TGATTGCATTGCTATGCTCT+CGG | 0.518127 | 8.3:-64376382 | MS.gene071826:CDS |
| AATTATGGTGCACGTTCTGA+TGG | 0.520827 | 8.3:-64377752 | MS.gene071826:CDS |
| AAATTGACTGTTGGTGGAGG+TGG | 0.527277 | 8.3:-64377392 | MS.gene071826:CDS |
| ACCATTACTTGTGCCACTAA+AGG | 0.530125 | 8.3:+64376239 | None:intergenic |
| AAGTTCATCCAAGCATTGCA+TGG | 0.537683 | 8.3:+64377497 | None:intergenic |
| TTAAATGAATATGGATCACT+TGG | 0.537771 | 8.3:+64377449 | None:intergenic |
| TTAGTGGTCCATGCAATGCT+TGG | 0.539885 | 8.3:-64377505 | MS.gene071826:CDS |
| GAGTGGAGGATATTAATTTG+CGG | 0.539974 | 8.3:-64375849 | MS.gene071826:CDS |
| AAATTTGACTTCATCGCCAA+TGG | 0.546749 | 8.3:-64376588 | MS.gene071826:CDS |
| AATATTTCAAGTGTGAACAT+TGG | 0.546960 | 8.3:-64376414 | MS.gene071826:CDS |
| TGTTGGTGGAGGTGGCAGAT+TGG | 0.550018 | 8.3:-64377384 | MS.gene071826:CDS |
| GTTAACAAATTGACTGTTGG+TGG | 0.553903 | 8.3:-64377398 | MS.gene071826:CDS |
| GGAAGTCTTGGTAAGAATGA+AGG | 0.566088 | 8.3:-64376300 | MS.gene071826:CDS |
| AACAAATTGACTGTTGGTGG+AGG | 0.571472 | 8.3:-64377395 | MS.gene071826:CDS |
| CATGGAGTGATGCATGCAGA+TGG | 0.579101 | 8.3:-64377586 | MS.gene071826:CDS |
| TGTGTTGGGGCTATCATTGG+GGG | 0.592002 | 8.3:+64376470 | None:intergenic |
| CATGTGATGGACATAACCAT+TGG | 0.593698 | 8.3:+64376572 | None:intergenic |
| AGTGATGCATGCAGATGGAA+TGG | 0.594601 | 8.3:-64377581 | MS.gene071826:CDS |
| CATAGCAATGCAATCATCAC+CGG | 0.595285 | 8.3:+64376389 | None:intergenic |
| TGTGTATGAAGATATTGTGA+TGG | 0.595589 | 8.3:-64376160 | MS.gene071826:CDS |
| ATAATCTTGATCAATGACAA+TGG | 0.600281 | 8.3:+64376122 | None:intergenic |
| AATGATAGCCCCAACACAGA+TGG | 0.606825 | 8.3:-64376465 | MS.gene071826:CDS |
| GGTGGCAGATTGGATGGTCA+AGG | 0.607840 | 8.3:-64377374 | MS.gene071826:CDS |
| ACCATGCCAAAACATTAGAG+TGG | 0.613487 | 8.3:-64375866 | MS.gene071826:CDS |
| TGGTGTTAGAATCAAATCGT+GGG | 0.618282 | 8.3:-64376220 | MS.gene071826:CDS |
| CCTGGTCATGGAATTAGTGT+CGG | 0.621889 | 8.3:-64376321 | MS.gene071826:CDS |
| CCGACACTAATTCCATGACC+AGG | 0.625972 | 8.3:+64376321 | None:intergenic |
| TATGTTAACAAATTGACTGT+TGG | 0.627069 | 8.3:-64377401 | MS.gene071826:CDS |
| CAATGGTTATGTCCATCACA+TGG | 0.630146 | 8.3:-64376571 | MS.gene071826:CDS |
| ATGGTGTTAGAATCAAATCG+TGG | 0.632554 | 8.3:-64376221 | MS.gene071826:CDS |
| TGTTGATAGATTCCATGTGA+TGG | 0.635321 | 8.3:+64376559 | None:intergenic |
| ATGCCAAAACATTAGAGTGG+AGG | 0.635960 | 8.3:-64375863 | MS.gene071826:CDS |
| AAGTGTACAAATAAGCAATG+TGG | 0.668805 | 8.3:-64375956 | MS.gene071826:CDS |
| TGGCAATACCGACAATAGAG+TGG | 0.681148 | 8.3:-64377732 | MS.gene071826:intron |
| CAGATGGTATCAAAATAGGG+AGG | 0.716988 | 8.3:-64376449 | MS.gene071826:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTCTAATATACAAA+AGG | - | chr8.3:64376820-64376839 | MS.gene071826:intron | 10.0% |
| !! | TTAACAAAAAAAAAACGATA+AGG | - | chr8.3:64376553-64376572 | MS.gene071826:CDS | 15.0% |
| !!! | TATCATGATTTTGATTTTAA+TGG | + | chr8.3:64376690-64376709 | None:intergenic | 15.0% |
| !! | AAAGTCATTTCGTATTATTT+GGG | - | chr8.3:64377062-64377081 | MS.gene071826:intron | 20.0% |
| !! | ATATAAAATGAACTTACAGT+AGG | + | chr8.3:64376299-64376318 | None:intergenic | 20.0% |
| !! | CTAATTTCTTAACTAAATAG+TGG | + | chr8.3:64376783-64376802 | None:intergenic | 20.0% |
| !! | GAGAGGAAAAAAAATATAAA+TGG | - | chr8.3:64376438-64376457 | MS.gene071826:CDS | 20.0% |
| !! | TGAAATAAATCATCAAACAT+TGG | - | chr8.3:64376720-64376739 | MS.gene071826:intron | 20.0% |
| !! | TTATCAGTCTTAAATGAATA+TGG | + | chr8.3:64376155-64376174 | None:intergenic | 20.0% |
| !!! | AATGTGTGTTTATTTGTTAA+GGG | - | chr8.3:64377793-64377812 | MS.gene071826:CDS | 20.0% |
| !!! | AGTTTGTTATTTTCTTATGA+AGG | - | chr8.3:64375971-64375990 | MS.gene071826:intron | 20.0% |
| !!! | ATATATTTTGTGGATATGTT+TGG | - | chr8.3:64376971-64376990 | MS.gene071826:intron | 20.0% |
| !!! | ATTCATTTAAGACTGATAAT+TGG | - | chr8.3:64376156-64376175 | MS.gene071826:CDS | 20.0% |
| ! | AAACTTATAAAAGACTAAGC+TGG | + | chr8.3:64377565-64377584 | None:intergenic | 25.0% |
| ! | AACTTATAAAAGACTAAGCT+GGG | + | chr8.3:64377564-64377583 | None:intergenic | 25.0% |
| ! | ATAATCTTGATCAATGACAA+TGG | + | chr8.3:64377473-64377492 | None:intergenic | 25.0% |
| ! | CAAAGTCATTTCGTATTATT+TGG | - | chr8.3:64377061-64377080 | MS.gene071826:intron | 25.0% |
| ! | TAATCTTGATCAATGACAAT+GGG | + | chr8.3:64377472-64377491 | None:intergenic | 25.0% |
| ! | TACAAAAATATTAGAGGAAG+TGG | - | chr8.3:64377661-64377680 | MS.gene071826:intron | 25.0% |
| ! | TATGTTAACAAATTGACTGT+TGG | - | chr8.3:64376191-64376210 | MS.gene071826:CDS | 25.0% |
| ! | TTAAATGAATATGGATCACT+TGG | + | chr8.3:64376146-64376165 | None:intergenic | 25.0% |
| !! | AATACATGTACATACCTTTT+TGG | + | chr8.3:64377515-64377534 | None:intergenic | 25.0% |
| !! | AATATTTCAAGTGTGAACAT+TGG | - | chr8.3:64377178-64377197 | MS.gene071826:intron | 25.0% |
| !! | ATTACTAAAGCTCATTTTGT+TGG | - | chr8.3:64376520-64376539 | MS.gene071826:CDS | 25.0% |
| !! | CAATGTGTGTTTATTTGTTA+AGG | - | chr8.3:64377792-64377811 | MS.gene071826:CDS | 25.0% |
| !! | CTTTTCAATGTGAAGAATTA+TGG | - | chr8.3:64375825-64375844 | MS.gene071826:CDS | 25.0% |
| !! | GTCATGTTTAATTAGTTTCT+AGG | - | chr8.3:64376650-64376669 | MS.gene071826:intron | 25.0% |
| !! | TCTGACAATAATTTTGTGTA+GGG | - | chr8.3:64377607-64377626 | MS.gene071826:intron | 25.0% |
| !! | TTACTAAAGCTCATTTTGTT+GGG | - | chr8.3:64376521-64376540 | MS.gene071826:CDS | 25.0% |
| !! | TTCTGACAATAATTTTGTGT+AGG | - | chr8.3:64377606-64377625 | MS.gene071826:intron | 25.0% |
| !!! | ATCGTTTTATTCAAAATGAG+AGG | - | chr8.3:64376421-64376440 | MS.gene071826:CDS | 25.0% |
| !!! | TGATTTTGATTTTAATGGTG+AGG | + | chr8.3:64376685-64376704 | None:intergenic | 25.0% |
| !!! | TGGATGAACTTTAAAATTGA+AGG | - | chr8.3:64376107-64376126 | MS.gene071826:CDS | 25.0% |
| AAAAACGATAAGGTAGAGTA+TGG | - | chr8.3:64376563-64376582 | MS.gene071826:CDS | 30.0% | |
| AAAATGCGAATGAATGAACA+TGG | + | chr8.3:64375893-64375912 | None:intergenic | 30.0% | |
| AACACAGATGGTATCAAAAT+AGG | - | chr8.3:64377139-64377158 | MS.gene071826:intron | 30.0% | |
| AAGTGTACAAATAAGCAATG+TGG | - | chr8.3:64377636-64377655 | MS.gene071826:intron | 30.0% | |
| ACACAGATGGTATCAAAATA+GGG | - | chr8.3:64377140-64377159 | MS.gene071826:intron | 30.0% | |
| AGAAGGGACATATATACTTA+AGG | - | chr8.3:64376055-64376074 | MS.gene071826:intron | 30.0% | |
| AGTATGGAAAAAGTAGAGAT+TGG | - | chr8.3:64376579-64376598 | MS.gene071826:CDS | 30.0% | |
| CATTGAAAAGCTTGTATTGA+CGG | + | chr8.3:64375815-64375834 | None:intergenic | 30.0% | |
| CTTAAGGAAGTTGTATTTAG+TGG | - | chr8.3:64376071-64376090 | MS.gene071826:intron | 30.0% | |
| GAAAATTACCACTCTATTGT+CGG | + | chr8.3:64375871-64375890 | None:intergenic | 30.0% | |
| GTCTCAATTGAAGAAAACTT+TGG | - | chr8.3:64377396-64377415 | MS.gene071826:CDS | 30.0% | |
| GTGGCTTACAAAAATATTAG+AGG | - | chr8.3:64377655-64377674 | MS.gene071826:intron | 30.0% | |
| GTTAAGAATTGTACCTTTAG+TGG | - | chr8.3:64377340-64377359 | MS.gene071826:CDS | 30.0% | |
| TAAGTATATATGTCCCTTCT+GGG | + | chr8.3:64376055-64376074 | None:intergenic | 30.0% | |
| TACTAGGAATGTTCGAATTT+CGG | - | chr8.3:64377234-64377253 | MS.gene071826:intron | 30.0% | |
| TATACCCTATGAAATTGATG+TGG | - | chr8.3:64376344-64376363 | MS.gene071826:CDS | 30.0% | |
| TGTGTATGAAGATATTGTGA+TGG | - | chr8.3:64377432-64377451 | MS.gene071826:CDS | 30.0% | |
| TTAAGTATATATGTCCCTTC+TGG | + | chr8.3:64376056-64376075 | None:intergenic | 30.0% | |
| ! | CTGACAATAATTTTGTGTAG+GGG | - | chr8.3:64377608-64377627 | MS.gene071826:intron | 30.0% |
| ! | GAGATAGAGTGTTTGTATTT+CGG | + | chr8.3:64376606-64376625 | None:intergenic | 30.0% |
| ! | TGACAATAATTTTGTGTAGG+GGG | - | chr8.3:64377609-64377628 | MS.gene071826:intron | 30.0% |
| !! | ATTTTGATACCATCTGTGTT+GGG | + | chr8.3:64377139-64377158 | None:intergenic | 30.0% |
| !!! | TATTTTGATACCATCTGTGT+TGG | + | chr8.3:64377140-64377159 | None:intergenic | 30.0% |
| !!! | TGAAGGCATTTTTAAAAGCA+TGG | - | chr8.3:64375988-64376007 | MS.gene071826:intron | 30.0% |
| ATCAAAATAGGGAGGTCAAA+TGG | - | chr8.3:64377151-64377170 | MS.gene071826:intron | 35.0% | |
| ATCTGCCACATCAATTTCAT+AGG | + | chr8.3:64376352-64376371 | None:intergenic | 35.0% | |
| GGTCAAAAGAACAAGCATTA+AGG | + | chr8.3:64376762-64376781 | None:intergenic | 35.0% | |
| GTTAACAAATTGACTGTTGG+TGG | - | chr8.3:64376194-64376213 | MS.gene071826:CDS | 35.0% | |
| TCTGCCACATCAATTTCATA+GGG | + | chr8.3:64376351-64376370 | None:intergenic | 35.0% | |
| ! | AAATTTGACTTCATCGCCAA+TGG | - | chr8.3:64377004-64377023 | MS.gene071826:intron | 35.0% |
| ! | ATGGTGTTAGAATCAAATCG+TGG | - | chr8.3:64377371-64377390 | MS.gene071826:CDS | 35.0% |
| ! | CTCATTTTGTTGGGAATTGA+GGG | - | chr8.3:64376530-64376549 | MS.gene071826:CDS | 35.0% |
| ! | GAGTGGAGGATATTAATTTG+CGG | - | chr8.3:64377743-64377762 | MS.gene071826:CDS | 35.0% |
| ! | TATCCTCCACTCTAATGTTT+TGG | + | chr8.3:64377735-64377754 | None:intergenic | 35.0% |
| ! | TGGTGTTAGAATCAAATCGT+GGG | - | chr8.3:64377372-64377391 | MS.gene071826:CDS | 35.0% |
| ! | TGTTGATAGATTCCATGTGA+TGG | + | chr8.3:64377036-64377055 | None:intergenic | 35.0% |
| ! | TTTTGATACCATCTGTGTTG+GGG | + | chr8.3:64377138-64377157 | None:intergenic | 35.0% |
| !! | TTTGTTAAGGGTGCTAGTTA+TGG | - | chr8.3:64377805-64377824 | MS.gene071826:CDS | 35.0% |
| !!! | CGAATTTCGGATGTTTTTTG+TGG | - | chr8.3:64377247-64377266 | MS.gene071826:intron | 35.0% |
| AATTATGGTGCACGTTCTGA+TGG | - | chr8.3:64375840-64375859 | MS.gene071826:CDS | 40.0% | |
| ACAATGTGATTGAGCTCAAG+CGG | - | chr8.3:64376475-64376494 | MS.gene071826:CDS | 40.0% | |
| ACCATGCCAAAACATTAGAG+TGG | - | chr8.3:64377726-64377745 | MS.gene071826:intron | 40.0% | |
| ACCTTTAGTGGCACAAGTAA+TGG | - | chr8.3:64377352-64377371 | MS.gene071826:CDS | 40.0% | |
| ATGCCAAAACATTAGAGTGG+AGG | - | chr8.3:64377729-64377748 | MS.gene071826:intron | 40.0% | |
| CAATGGTTATGTCCATCACA+TGG | - | chr8.3:64377021-64377040 | MS.gene071826:intron | 40.0% | |
| CAGATGGTATCAAAATAGGG+AGG | - | chr8.3:64377143-64377162 | MS.gene071826:intron | 40.0% | |
| CATAGCAATGCAATCATCAC+CGG | + | chr8.3:64377206-64377225 | None:intergenic | 40.0% | |
| GGAAGTCTTGGTAAGAATGA+AGG | - | chr8.3:64377292-64377311 | MS.gene071826:intron | 40.0% | |
| TCAAGTGTGAACATTGGAAC+CGG | - | chr8.3:64377184-64377203 | MS.gene071826:intron | 40.0% | |
| TGATTGCATTGCTATGCTCT+CGG | - | chr8.3:64377210-64377229 | MS.gene071826:intron | 40.0% | |
| ! | AACAAATTGACTGTTGGTGG+AGG | - | chr8.3:64376197-64376216 | MS.gene071826:CDS | 40.0% |
| ! | AAGTTCATCCAAGCATTGCA+TGG | + | chr8.3:64376098-64376117 | None:intergenic | 40.0% |
| ! | ACCATTACTTGTGCCACTAA+AGG | + | chr8.3:64377356-64377375 | None:intergenic | 40.0% |
| ! | AGTCTTTTACTACGACCAGA+AGG | + | chr8.3:64377769-64377788 | None:intergenic | 40.0% |
| ! | CAACTGTTTTCATCCCAGAA+GGG | - | chr8.3:64376039-64376058 | MS.gene071826:intron | 40.0% |
| ! | GCTCATTTTGTTGGGAATTG+AGG | - | chr8.3:64376529-64376548 | MS.gene071826:CDS | 40.0% |
| !! | CATGTGATGGACATAACCAT+TGG | + | chr8.3:64377023-64377042 | None:intergenic | 40.0% |
| !! | GATATTAATTTGCGGCCTTC+TGG | - | chr8.3:64377751-64377770 | MS.gene071826:CDS | 40.0% |
| !! | GTACATACCTTTTTGGTGCA+CGG | + | chr8.3:64377508-64377527 | None:intergenic | 40.0% |
| !!! | TCCACTCTAATGTTTTGGCA+TGG | + | chr8.3:64377730-64377749 | None:intergenic | 40.0% |
| AATGATAGCCCCAACACAGA+TGG | - | chr8.3:64377127-64377146 | MS.gene071826:intron | 45.0% | |
| AGTGATGCATGCAGATGGAA+TGG | - | chr8.3:64376011-64376030 | MS.gene071826:intron | 45.0% | |
| ATCTGTGTTGGGGCTATCAT+TGG | + | chr8.3:64377128-64377147 | None:intergenic | 45.0% | |
| ATGGTCAAGGATCTTCTGCT+TGG | - | chr8.3:64376231-64376250 | MS.gene071826:CDS | 45.0% | |
| CCTGGTCATGGAATTAGTGT+CGG | - | chr8.3:64377271-64377290 | MS.gene071826:intron | 45.0% | |
| GATTGCATTGCTATGCTCTC+GGG | - | chr8.3:64377211-64377230 | MS.gene071826:intron | 45.0% | |
| TCTGTGTTGGGGCTATCATT+GGG | + | chr8.3:64377127-64377146 | None:intergenic | 45.0% | |
| TGGCAATACCGACAATAGAG+TGG | - | chr8.3:64375860-64375879 | MS.gene071826:CDS | 45.0% | |
| TTAGTGGTCCATGCAATGCT+TGG | - | chr8.3:64376087-64376106 | MS.gene071826:intron | 45.0% | |
| ! | AAATTGACTGTTGGTGGAGG+TGG | - | chr8.3:64376200-64376219 | MS.gene071826:CDS | 45.0% |
| ! | GCAACTGTTTTCATCCCAGA+AGG | - | chr8.3:64376038-64376057 | MS.gene071826:intron | 45.0% |
| ! | GGAATTAGTGTCGGAAGTCT+TGG | - | chr8.3:64377280-64377299 | MS.gene071826:intron | 45.0% |
| ! | TGCAAGAAGGGGGATTTTGT+TGG | + | chr8.3:64377831-64377850 | None:intergenic | 45.0% |
| !!! | GTTTTTTGTGGTCCTGGTCA+TGG | - | chr8.3:64377259-64377278 | MS.gene071826:intron | 45.0% |
| !!! | TCGGATGTTTTTTGTGGTCC+TGG | - | chr8.3:64377253-64377272 | MS.gene071826:intron | 45.0% |
| !!! | ATGTATTTTTTTTTAAATAA+TGG | + | chr8.3:64376887-64376906 | None:intergenic | 5.0% |
| !!! | ATTTTGTTATTAAAAATTAA+GGG | + | chr8.3:64376396-64376415 | None:intergenic | 5.0% |
| !!! | TATTTTGTTATTAAAAATTA+AGG | + | chr8.3:64376397-64376416 | None:intergenic | 5.0% |
| !!! | TTAAAATTTTATATATTTTG+TGG | - | chr8.3:64376961-64376980 | MS.gene071826:intron | 5.0% |
| CATGGAGTGATGCATGCAGA+TGG | - | chr8.3:64376006-64376025 | MS.gene071826:intron | 50.0% | |
| CCGACACTAATTCCATGACC+AGG | + | chr8.3:64377274-64377293 | None:intergenic | 50.0% | |
| CTGTGTTGGGGCTATCATTG+GGG | + | chr8.3:64377126-64377145 | None:intergenic | 50.0% | |
| TGTGTTGGGGCTATCATTGG+GGG | + | chr8.3:64377125-64377144 | None:intergenic | 50.0% | |
| TTGCTATGCTCTCGGGTACT+AGG | - | chr8.3:64377218-64377237 | MS.gene071826:intron | 50.0% | |
| !! | CATACCTTTTTGGTGCACGG+AGG | + | chr8.3:64377505-64377524 | None:intergenic | 50.0% |
| ACGTCCTCCGTGCACCAAAA+AGG | - | chr8.3:64377498-64377517 | MS.gene071826:CDS | 55.0% | |
| GGTGGCAGATTGGATGGTCA+AGG | - | chr8.3:64376218-64376237 | MS.gene071826:CDS | 55.0% | |
| ! | TGTTGGTGGAGGTGGCAGAT+TGG | - | chr8.3:64376208-64376227 | MS.gene071826:CDS | 55.0% |
| !! | TTTTTGGTGCACGGAGGACG+TGG | + | chr8.3:64377499-64377518 | None:intergenic | 55.0% |
| GGTGGAGGTGGCAGATTGGA+TGG | - | chr8.3:64376212-64376231 | MS.gene071826:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 64375756 | 64377858 | 64375756 | ID=MS.gene071826 |
| chr8.3 | mRNA | 64375756 | 64377858 | 64375756 | ID=MS.gene071826.t1;Parent=MS.gene071826 |
| chr8.3 | exon | 64377733 | 64377858 | 64377733 | ID=MS.gene071826.t1.exon1;Parent=MS.gene071826.t1 |
| chr8.3 | CDS | 64377733 | 64377858 | 64377733 | ID=cds.MS.gene071826.t1;Parent=MS.gene071826.t1 |
| chr8.3 | exon | 64377313 | 64377621 | 64377313 | ID=MS.gene071826.t1.exon2;Parent=MS.gene071826.t1 |
| chr8.3 | CDS | 64377313 | 64377621 | 64377313 | ID=cds.MS.gene071826.t1;Parent=MS.gene071826.t1 |
| chr8.3 | exon | 64376095 | 64376616 | 64376095 | ID=MS.gene071826.t1.exon3;Parent=MS.gene071826.t1 |
| chr8.3 | CDS | 64376095 | 64376616 | 64376095 | ID=cds.MS.gene071826.t1;Parent=MS.gene071826.t1 |
| chr8.3 | exon | 64375756 | 64375986 | 64375756 | ID=MS.gene071826.t1.exon4;Parent=MS.gene071826.t1 |
| chr8.3 | CDS | 64375756 | 64375986 | 64375756 | ID=cds.MS.gene071826.t1;Parent=MS.gene071826.t1 |
| Gene Sequence |
| Protein sequence |
