Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071829.t1 | XP_013444838.1 | 88.5 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 1.10E-203 | 719.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071829.t1 | Q39766 | 44.5 | 389 | 211 | 4 | 6 | 393 | 11 | 395 | 9.2e-95 | 348.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071829.t1 | A0A072TPY4 | 88.5 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 7.8e-204 | 719.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071829 | MS.gene86370 | PPI |
| MS.gene071829 | MS.gene92027 | PPI |
| MS.gene071829 | MS.gene29308 | PPI |
| MS.gene071829 | MS.gene071826 | PPI |
| MS.gene071829 | MS.gene36228 | PPI |
| MS.gene071829 | MS.gene056777 | PPI |
| MS.gene071829 | MS.gene069198 | PPI |
| MS.gene071829 | MS.gene069200 | PPI |
| MS.gene071829 | MS.gene51014 | PPI |
| MS.gene071829 | MS.gene018971 | PPI |
| MS.gene071829 | MS.gene22233 | PPI |
| MS.gene071829 | MS.gene072441 | PPI |
| MS.gene071829 | MS.gene019143 | PPI |
| MS.gene63570 | MS.gene071829 | PPI |
| MS.gene071829 | MS.gene89048 | PPI |
| MS.gene071829 | MS.gene019625 | PPI |
| MS.gene071829 | MS.gene038102 | PPI |
| MS.gene071829 | MS.gene63570 | PPI |
| MS.gene071829 | MS.gene019627 | PPI |
| MS.gene071829 | MS.gene03618 | PPI |
| MS.gene071829 | MS.gene46962 | PPI |
| MS.gene071829 | MS.gene78336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071829.t1 | MTR_8g030930 | 88.471 | 399 | 42 | 2 | 1 | 395 | 1 | 399 | 0.0 | 695 |
| MS.gene071829.t1 | MTR_3g438050 | 63.131 | 396 | 143 | 3 | 1 | 394 | 1 | 395 | 0.0 | 515 |
| MS.gene071829.t1 | MTR_5g063430 | 70.418 | 311 | 87 | 1 | 1 | 311 | 1 | 306 | 3.50e-167 | 470 |
| MS.gene071829.t1 | MTR_1g088160 | 42.216 | 379 | 205 | 7 | 24 | 394 | 34 | 406 | 1.62e-99 | 302 |
| MS.gene071829.t1 | MTR_2g058670 | 37.913 | 393 | 232 | 6 | 6 | 390 | 6 | 394 | 6.16e-97 | 295 |
| MS.gene071829.t1 | MTR_2g058840 | 37.531 | 397 | 226 | 6 | 6 | 390 | 6 | 392 | 2.50e-96 | 294 |
| MS.gene071829.t1 | MTR_2g058640 | 37.755 | 392 | 232 | 6 | 7 | 390 | 7 | 394 | 1.45e-92 | 284 |
| MS.gene071829.t1 | MTR_4g083660 | 40.642 | 374 | 210 | 7 | 25 | 394 | 9 | 374 | 6.98e-90 | 276 |
| MS.gene071829.t1 | MTR_2g049400 | 39.286 | 392 | 224 | 8 | 5 | 394 | 12 | 391 | 7.66e-89 | 274 |
| MS.gene071829.t1 | MTR_2g435640 | 37.766 | 376 | 225 | 6 | 23 | 393 | 51 | 422 | 6.49e-87 | 270 |
| MS.gene071829.t1 | MTR_1g052315 | 40.779 | 385 | 212 | 10 | 8 | 382 | 46 | 424 | 5.53e-86 | 268 |
| MS.gene071829.t1 | MTR_5g097860 | 43.125 | 320 | 176 | 4 | 21 | 337 | 21 | 337 | 6.67e-86 | 265 |
| MS.gene071829.t1 | MTR_7g091850 | 40.793 | 353 | 198 | 7 | 18 | 364 | 69 | 416 | 6.39e-85 | 266 |
| MS.gene071829.t1 | MTR_4g120320 | 36.340 | 377 | 229 | 6 | 23 | 393 | 50 | 421 | 3.82e-82 | 258 |
| MS.gene071829.t1 | MTR_7g091840 | 41.250 | 320 | 177 | 6 | 23 | 335 | 63 | 378 | 3.23e-80 | 251 |
| MS.gene071829.t1 | MTR_6g028080 | 39.024 | 369 | 198 | 9 | 25 | 377 | 30 | 387 | 2.57e-79 | 249 |
| MS.gene071829.t1 | MTR_2g060350 | 38.624 | 378 | 214 | 10 | 24 | 390 | 73 | 443 | 3.65e-79 | 251 |
| MS.gene071829.t1 | MTR_2g103410 | 36.605 | 377 | 226 | 8 | 24 | 393 | 58 | 428 | 5.13e-79 | 250 |
| MS.gene071829.t1 | MTR_4g084050 | 40.533 | 375 | 198 | 9 | 4 | 364 | 2 | 365 | 8.96e-79 | 248 |
| MS.gene071829.t1 | MTR_8g009810 | 36.896 | 393 | 236 | 8 | 5 | 393 | 15 | 399 | 9.66e-79 | 248 |
| MS.gene071829.t1 | MTR_3g030540 | 40.845 | 355 | 199 | 7 | 15 | 364 | 60 | 408 | 1.89e-76 | 243 |
| MS.gene071829.t1 | MTR_8g065030 | 34.133 | 375 | 234 | 7 | 24 | 392 | 64 | 431 | 3.67e-76 | 243 |
| MS.gene071829.t1 | MTR_3g084380 | 40.115 | 349 | 189 | 8 | 25 | 364 | 21 | 358 | 1.26e-74 | 238 |
| MS.gene071829.t1 | MTR_3g054320 | 38.070 | 373 | 200 | 9 | 11 | 366 | 7 | 365 | 1.38e-72 | 232 |
| MS.gene071829.t1 | MTR_3g084360 | 37.931 | 377 | 212 | 9 | 6 | 371 | 3 | 368 | 4.70e-72 | 231 |
| MS.gene071829.t1 | MTR_5g043350 | 37.808 | 365 | 204 | 9 | 4 | 354 | 2 | 357 | 2.02e-71 | 229 |
| MS.gene071829.t1 | MTR_2g029170 | 39.296 | 341 | 195 | 8 | 58 | 394 | 29 | 361 | 1.23e-70 | 226 |
| MS.gene071829.t1 | MTR_8g010110 | 36.364 | 374 | 219 | 6 | 7 | 377 | 13 | 370 | 2.04e-70 | 226 |
| MS.gene071829.t1 | MTR_4g094715 | 33.938 | 386 | 236 | 8 | 24 | 395 | 64 | 444 | 4.57e-70 | 228 |
| MS.gene071829.t1 | MTR_8g010080 | 35.356 | 379 | 223 | 7 | 5 | 377 | 7 | 369 | 6.16e-70 | 225 |
| MS.gene071829.t1 | MTR_8g010070 | 35.156 | 384 | 229 | 8 | 5 | 384 | 11 | 378 | 5.72e-69 | 223 |
| MS.gene071829.t1 | MTR_6g005630 | 35.185 | 378 | 223 | 11 | 5 | 370 | 17 | 384 | 1.17e-68 | 223 |
| MS.gene071829.t1 | MTR_1g086390 | 34.987 | 383 | 229 | 9 | 24 | 391 | 80 | 457 | 4.16e-68 | 223 |
| MS.gene071829.t1 | MTR_5g033680 | 33.943 | 383 | 236 | 9 | 21 | 392 | 55 | 431 | 1.33e-66 | 219 |
| MS.gene071829.t1 | MTR_7g110050 | 34.367 | 387 | 232 | 11 | 24 | 394 | 66 | 446 | 1.98e-66 | 218 |
| MS.gene071829.t1 | MTR_0157s0060 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.03e-66 | 215 |
| MS.gene071829.t1 | MTR_4g034020 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.03e-66 | 215 |
| MS.gene071829.t1 | MTR_2g100040 | 35.376 | 359 | 181 | 6 | 7 | 363 | 8 | 317 | 4.93e-66 | 214 |
| MS.gene071829.t1 | MTR_2g103650 | 32.984 | 382 | 243 | 7 | 5 | 377 | 8 | 385 | 5.27e-66 | 215 |
| MS.gene071829.t1 | MTR_8g010090 | 34.734 | 357 | 214 | 6 | 24 | 377 | 30 | 370 | 3.99e-65 | 213 |
| MS.gene071829.t1 | MTR_8g008765 | 35.694 | 353 | 205 | 6 | 5 | 350 | 7 | 344 | 7.75e-65 | 211 |
| MS.gene071829.t1 | MTR_1g012390 | 32.737 | 391 | 250 | 9 | 6 | 391 | 9 | 391 | 4.03e-61 | 202 |
| MS.gene071829.t1 | MTR_8g010040 | 34.551 | 356 | 213 | 7 | 25 | 377 | 32 | 370 | 6.59e-61 | 202 |
| MS.gene071829.t1 | MTR_5g034090 | 33.244 | 373 | 214 | 8 | 24 | 366 | 120 | 487 | 1.04e-60 | 205 |
| MS.gene071829.t1 | MTR_1g013730 | 32.552 | 384 | 232 | 8 | 6 | 384 | 8 | 369 | 3.11e-59 | 197 |
| MS.gene071829.t1 | MTR_7g035415 | 33.645 | 321 | 188 | 8 | 5 | 310 | 10 | 320 | 5.76e-57 | 190 |
| MS.gene071829.t1 | MTR_1g013740 | 30.808 | 396 | 246 | 8 | 5 | 394 | 15 | 388 | 6.59e-57 | 191 |
| MS.gene071829.t1 | MTR_8g010050 | 40.580 | 276 | 153 | 4 | 5 | 276 | 11 | 279 | 1.29e-56 | 189 |
| MS.gene071829.t1 | MTR_2g103410 | 36.727 | 275 | 167 | 4 | 24 | 292 | 58 | 331 | 1.33e-56 | 189 |
| MS.gene071829.t1 | MTR_8g065010 | 31.367 | 373 | 220 | 8 | 25 | 366 | 107 | 474 | 2.40e-55 | 190 |
| MS.gene071829.t1 | MTR_7g113910 | 35.987 | 314 | 161 | 10 | 85 | 393 | 74 | 352 | 1.37e-54 | 185 |
| MS.gene071829.t1 | MTR_2g032710 | 32.493 | 357 | 221 | 7 | 24 | 366 | 66 | 416 | 1.76e-54 | 187 |
| MS.gene071829.t1 | MTR_6g005630 | 33.069 | 378 | 208 | 13 | 5 | 370 | 17 | 361 | 2.22e-54 | 185 |
| MS.gene071829.t1 | MTR_8g077320 | 34.194 | 310 | 160 | 6 | 15 | 310 | 23 | 302 | 6.54e-48 | 167 |
| MS.gene071829.t1 | MTR_5g034090 | 33.559 | 295 | 166 | 5 | 24 | 288 | 120 | 414 | 8.27e-47 | 165 |
| MS.gene071829.t1 | MTR_8g008700 | 34.375 | 288 | 170 | 5 | 84 | 367 | 14 | 286 | 4.13e-44 | 155 |
| MS.gene071829.t1 | MTR_8g031180 | 31.525 | 295 | 166 | 6 | 85 | 372 | 15 | 280 | 1.44e-35 | 132 |
| MS.gene071829.t1 | MTR_7g072360 | 58.182 | 110 | 24 | 1 | 167 | 276 | 41 | 128 | 3.88e-32 | 118 |
| MS.gene071829.t1 | MTR_7g072370 | 75.806 | 62 | 15 | 0 | 221 | 282 | 1 | 62 | 1.78e-24 | 95.5 |
| MS.gene071829.t1 | MTR_7g078680 | 23.116 | 398 | 264 | 10 | 26 | 391 | 56 | 443 | 9.86e-18 | 85.1 |
| MS.gene071829.t1 | MTR_4g124980 | 23.325 | 403 | 265 | 12 | 24 | 393 | 73 | 464 | 4.70e-17 | 83.2 |
| MS.gene071829.t1 | MTR_2g042740 | 23.325 | 403 | 265 | 13 | 24 | 393 | 55 | 446 | 2.69e-16 | 80.9 |
| MS.gene071829.t1 | MTR_8g098840 | 22.864 | 398 | 265 | 11 | 26 | 391 | 45 | 432 | 3.06e-15 | 77.4 |
| MS.gene071829.t1 | MTR_1g100050 | 23.350 | 394 | 252 | 10 | 27 | 384 | 52 | 431 | 1.11e-14 | 75.9 |
| MS.gene071829.t1 | MTR_8g028725 | 22.892 | 415 | 276 | 11 | 7 | 391 | 43 | 443 | 1.95e-14 | 75.1 |
| MS.gene071829.t1 | MTR_1g100060 | 22.727 | 396 | 252 | 12 | 27 | 384 | 95 | 474 | 3.49e-14 | 74.3 |
| MS.gene071829.t1 | MTR_1g100040 | 23.096 | 394 | 253 | 10 | 27 | 384 | 58 | 437 | 4.41e-13 | 70.9 |
| MS.gene071829.t1 | MTR_1g099850 | 22.500 | 440 | 253 | 12 | 8 | 384 | 22 | 436 | 1.75e-12 | 68.9 |
| MS.gene071829.t1 | MTR_4g120730 | 22.074 | 376 | 241 | 12 | 26 | 364 | 41 | 401 | 1.84e-12 | 68.9 |
| MS.gene071829.t1 | MTR_3g449590 | 23.040 | 421 | 272 | 12 | 15 | 393 | 37 | 447 | 2.78e-12 | 68.2 |
| MS.gene071829.t1 | MTR_5g090160 | 22.328 | 421 | 276 | 13 | 11 | 393 | 28 | 435 | 4.83e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071829.t1 | AT1G78400 | 51.206 | 373 | 181 | 1 | 23 | 395 | 33 | 404 | 1.88e-135 | 393 |
| MS.gene071829.t1 | AT2G15450 | 49.490 | 392 | 193 | 4 | 7 | 394 | 13 | 403 | 1.49e-131 | 384 |
| MS.gene071829.t1 | AT1G17150 | 47.558 | 389 | 201 | 2 | 8 | 394 | 14 | 401 | 5.49e-131 | 382 |
| MS.gene071829.t1 | AT1G43080 | 49.618 | 393 | 189 | 6 | 9 | 394 | 13 | 403 | 3.82e-130 | 380 |
| MS.gene071829.t1 | AT1G43090 | 50.130 | 385 | 185 | 5 | 9 | 387 | 13 | 396 | 1.57e-129 | 380 |
| MS.gene071829.t1 | AT2G15460 | 49.227 | 388 | 192 | 4 | 7 | 390 | 13 | 399 | 1.34e-128 | 376 |
| MS.gene071829.t1 | AT2G33160 | 47.643 | 403 | 200 | 5 | 1 | 393 | 1 | 402 | 1.67e-128 | 384 |
| MS.gene071829.t1 | AT2G15470 | 48.980 | 392 | 195 | 4 | 7 | 394 | 13 | 403 | 2.24e-128 | 375 |
| MS.gene071829.t1 | AT4G13760 | 48.223 | 394 | 195 | 5 | 5 | 394 | 15 | 403 | 1.44e-127 | 373 |
| MS.gene071829.t1 | AT1G43100 | 50.259 | 386 | 183 | 6 | 9 | 387 | 13 | 396 | 2.07e-126 | 372 |
| MS.gene071829.t1 | AT2G40310 | 47.980 | 396 | 200 | 5 | 4 | 394 | 9 | 403 | 2.98e-125 | 367 |
| MS.gene071829.t1 | AT2G26620 | 48.052 | 385 | 197 | 3 | 12 | 394 | 18 | 401 | 9.95e-123 | 361 |
| MS.gene071829.t1 | AT3G07820 | 38.422 | 393 | 235 | 3 | 1 | 393 | 1 | 386 | 1.27e-100 | 304 |
| MS.gene071829.t1 | AT5G48140 | 39.695 | 393 | 225 | 4 | 1 | 393 | 6 | 386 | 1.94e-100 | 304 |
| MS.gene071829.t1 | AT3G07840 | 40.464 | 388 | 220 | 5 | 6 | 393 | 11 | 387 | 9.78e-100 | 302 |
| MS.gene071829.t1 | AT2G43890 | 42.091 | 373 | 204 | 8 | 25 | 394 | 29 | 392 | 1.05e-98 | 299 |
| MS.gene071829.t1 | AT4G18180 | 40.260 | 385 | 214 | 6 | 24 | 393 | 38 | 421 | 1.79e-98 | 300 |
| MS.gene071829.t1 | AT3G07830 | 38.287 | 397 | 231 | 4 | 1 | 393 | 1 | 387 | 4.52e-96 | 293 |
| MS.gene071829.t1 | AT1G05650 | 38.520 | 392 | 232 | 6 | 5 | 394 | 8 | 392 | 3.44e-95 | 290 |
| MS.gene071829.t1 | AT1G80170 | 39.791 | 382 | 218 | 7 | 20 | 394 | 48 | 424 | 1.78e-94 | 290 |
| MS.gene071829.t1 | AT1G05660 | 37.659 | 393 | 236 | 6 | 4 | 394 | 7 | 392 | 9.62e-92 | 281 |
| MS.gene071829.t1 | AT3G14040 | 40.209 | 383 | 223 | 4 | 15 | 395 | 61 | 439 | 2.96e-91 | 282 |
| MS.gene071829.t1 | AT3G07850 | 40.483 | 373 | 216 | 4 | 25 | 395 | 70 | 438 | 2.26e-89 | 277 |
| MS.gene071829.t1 | AT2G43880 | 39.084 | 371 | 218 | 5 | 25 | 394 | 31 | 394 | 4.48e-88 | 272 |
| MS.gene071829.t1 | AT2G43870 | 39.846 | 389 | 219 | 10 | 6 | 390 | 4 | 381 | 5.06e-88 | 271 |
| MS.gene071829.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 21 | 388 | 9.34e-87 | 268 |
| MS.gene071829.t1 | AT3G07970 | 40.053 | 377 | 216 | 7 | 19 | 390 | 65 | 436 | 1.04e-86 | 270 |
| MS.gene071829.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 65 | 432 | 2.62e-86 | 269 |
| MS.gene071829.t1 | AT2G41850 | 39.370 | 381 | 218 | 8 | 15 | 389 | 58 | 431 | 4.14e-85 | 266 |
| MS.gene071829.t1 | AT3G57510 | 40.000 | 375 | 213 | 8 | 8 | 376 | 52 | 420 | 7.54e-85 | 265 |
| MS.gene071829.t1 | AT1G02790 | 36.649 | 382 | 221 | 5 | 1 | 370 | 16 | 388 | 3.92e-83 | 260 |
| MS.gene071829.t1 | AT2G43860 | 40.563 | 355 | 195 | 9 | 25 | 370 | 33 | 380 | 1.25e-79 | 251 |
| MS.gene071829.t1 | AT1G65570 | 36.000 | 400 | 237 | 12 | 5 | 394 | 7 | 397 | 4.09e-75 | 239 |
| MS.gene071829.t1 | AT2G43880 | 41.869 | 289 | 162 | 4 | 25 | 312 | 31 | 314 | 5.23e-75 | 236 |
| MS.gene071829.t1 | AT4G35670 | 36.939 | 379 | 222 | 8 | 23 | 395 | 22 | 389 | 9.66e-75 | 238 |
| MS.gene071829.t1 | AT1G70500 | 33.333 | 375 | 237 | 7 | 24 | 392 | 66 | 433 | 7.00e-74 | 238 |
| MS.gene071829.t1 | AT1G23460 | 33.067 | 375 | 238 | 7 | 24 | 392 | 42 | 409 | 5.46e-72 | 232 |
| MS.gene071829.t1 | AT3G26610 | 36.827 | 353 | 209 | 7 | 24 | 368 | 66 | 412 | 5.71e-72 | 233 |
| MS.gene071829.t1 | AT1G23460 | 33.067 | 375 | 238 | 7 | 24 | 392 | 66 | 433 | 9.97e-72 | 232 |
| MS.gene071829.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 23 | 378 | 2.15e-71 | 231 |
| MS.gene071829.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 24 | 379 | 2.53e-71 | 231 |
| MS.gene071829.t1 | AT5G17200 | 33.411 | 428 | 232 | 9 | 1 | 388 | 1 | 415 | 5.63e-70 | 226 |
| MS.gene071829.t1 | AT1G02460 | 34.625 | 387 | 228 | 10 | 24 | 391 | 88 | 468 | 8.30e-69 | 225 |
| MS.gene071829.t1 | AT3G15720 | 36.512 | 367 | 212 | 8 | 25 | 384 | 23 | 375 | 2.70e-68 | 223 |
| MS.gene071829.t1 | AT5G27530 | 36.963 | 349 | 194 | 8 | 23 | 364 | 51 | 380 | 4.23e-68 | 223 |
| MS.gene071829.t1 | AT5G14650 | 35.714 | 378 | 227 | 12 | 25 | 395 | 51 | 419 | 4.29e-67 | 219 |
| MS.gene071829.t1 | AT1G80170 | 41.509 | 265 | 148 | 4 | 20 | 278 | 48 | 311 | 4.55e-67 | 216 |
| MS.gene071829.t1 | AT4G32380 | 34.080 | 402 | 242 | 9 | 5 | 393 | 3 | 394 | 4.70e-67 | 219 |
| MS.gene071829.t1 | AT5G44840 | 33.081 | 396 | 246 | 8 | 6 | 395 | 8 | 390 | 2.90e-66 | 216 |
| MS.gene071829.t1 | AT4G01890 | 33.516 | 364 | 215 | 11 | 24 | 367 | 64 | 420 | 4.65e-64 | 212 |
| MS.gene071829.t1 | AT1G80140 | 36.232 | 345 | 200 | 8 | 58 | 393 | 2 | 335 | 8.08e-64 | 207 |
| MS.gene071829.t1 | AT1G10640 | 31.000 | 400 | 238 | 7 | 23 | 392 | 117 | 508 | 1.86e-63 | 212 |
| MS.gene071829.t1 | AT1G60590 | 31.467 | 375 | 219 | 7 | 25 | 366 | 123 | 492 | 6.01e-62 | 208 |
| MS.gene071829.t1 | AT1G56710 | 33.161 | 386 | 238 | 8 | 24 | 394 | 47 | 427 | 7.96e-62 | 205 |
| MS.gene071829.t1 | AT1G48100 | 33.427 | 356 | 219 | 8 | 24 | 366 | 79 | 429 | 1.36e-61 | 206 |
| MS.gene071829.t1 | AT3G15720 | 36.308 | 325 | 190 | 6 | 66 | 384 | 2 | 315 | 3.69e-60 | 200 |
| MS.gene071829.t1 | AT4G32375 | 35.417 | 288 | 176 | 3 | 99 | 385 | 8 | 286 | 2.36e-57 | 193 |
| MS.gene071829.t1 | AT4G32370 | 36.923 | 325 | 173 | 12 | 5 | 310 | 11 | 322 | 7.09e-57 | 190 |
| MS.gene071829.t1 | AT5G39910 | 30.456 | 417 | 204 | 8 | 1 | 390 | 6 | 363 | 1.33e-56 | 190 |
| MS.gene071829.t1 | AT4G35670 | 36.519 | 293 | 173 | 5 | 104 | 395 | 2 | 282 | 3.07e-54 | 181 |
| MS.gene071829.t1 | AT5G44830 | 34.405 | 311 | 180 | 6 | 59 | 364 | 10 | 301 | 3.23e-54 | 182 |
| MS.gene071829.t1 | AT4G32380 | 30.500 | 400 | 218 | 8 | 5 | 393 | 3 | 353 | 1.04e-53 | 183 |
| MS.gene071829.t1 | AT5G14650 | 37.066 | 259 | 154 | 7 | 25 | 278 | 51 | 305 | 3.07e-48 | 166 |
| MS.gene071829.t1 | AT1G19170 | 23.342 | 407 | 261 | 12 | 24 | 393 | 86 | 478 | 2.83e-17 | 84.0 |
| MS.gene071829.t1 | AT4G23820 | 24.297 | 391 | 241 | 11 | 15 | 367 | 31 | 404 | 3.60e-17 | 83.2 |
| MS.gene071829.t1 | AT3G48950 | 21.921 | 406 | 261 | 11 | 27 | 393 | 47 | 435 | 2.97e-15 | 77.8 |
| MS.gene071829.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071829.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071829.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 11 | 433 | 1.01e-14 | 75.9 |
| MS.gene071829.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 26 | 448 | 1.17e-14 | 75.9 |
| MS.gene071829.t1 | AT3G61490 | 21.968 | 437 | 276 | 12 | 6 | 391 | 124 | 546 | 2.61e-14 | 75.1 |
| MS.gene071829.t1 | AT5G41870 | 22.760 | 413 | 270 | 12 | 15 | 393 | 35 | 432 | 1.31e-13 | 72.4 |
| MS.gene071829.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.77e-13 | 72.0 |
| MS.gene071829.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.77e-13 | 72.0 |
| MS.gene071829.t1 | AT2G23900 | 24.150 | 294 | 200 | 8 | 113 | 393 | 163 | 446 | 9.38e-12 | 67.0 |
| MS.gene071829.t1 | AT4G23500 | 22.362 | 398 | 267 | 11 | 26 | 391 | 69 | 456 | 5.15e-11 | 64.7 |
Find 0 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTCTAATATACAAA+AGG | - | 56975:8125-8144 | MS.gene071829:intron | 10.0% |
| !! | TTAACAAAAAAAAAACGATA+AGG | - | 56975:7858-7877 | MS.gene071829:CDS | 15.0% |
| !!! | TATCATGATTTTGATTTTAA+TGG | + | 56975:7995-8014 | None:intergenic | 15.0% |
| !! | AAAGTCATTTCGTATTATTT+GGG | - | 56975:8367-8386 | MS.gene071829:intron | 20.0% |
| !! | ATATAAAATGAACTTACAGT+AGG | + | 56975:7604-7623 | None:intergenic | 20.0% |
| !! | CTAATTTCTTAACTAAATAG+TGG | + | 56975:8088-8107 | None:intergenic | 20.0% |
| !! | GAGAGGAAAAAAAATATAAA+TGG | - | 56975:7743-7762 | MS.gene071829:CDS | 20.0% |
| !! | TGAAATAAATCATCAAACAT+TGG | - | 56975:8025-8044 | MS.gene071829:intron | 20.0% |
| !! | TTATCAGTCTTAAATGAATA+TGG | + | 56975:7460-7479 | None:intergenic | 20.0% |
| !!! | AATGTGTGTTTATTTGTTAA+GGG | - | 56975:9098-9117 | MS.gene071829:CDS | 20.0% |
| !!! | AGTTTGTTATTTTCTTATGA+AGG | - | 56975:7276-7295 | MS.gene071829:intron | 20.0% |
| !!! | ATATATTTTGTGGATATGTT+TGG | - | 56975:8276-8295 | MS.gene071829:intron | 20.0% |
| !!! | ATTCATTTAAGACTGATAAT+TGG | - | 56975:7461-7480 | MS.gene071829:CDS | 20.0% |
| ! | AAACTTATAAAAGACTAAGC+TGG | + | 56975:8870-8889 | None:intergenic | 25.0% |
| ! | AACTTATAAAAGACTAAGCT+GGG | + | 56975:8869-8888 | None:intergenic | 25.0% |
| ! | ATAATCTTGATCAATGACAA+TGG | + | 56975:8778-8797 | None:intergenic | 25.0% |
| ! | CAAAGTCATTTCGTATTATT+TGG | - | 56975:8366-8385 | MS.gene071829:intron | 25.0% |
| ! | TAATCTTGATCAATGACAAT+GGG | + | 56975:8777-8796 | None:intergenic | 25.0% |
| ! | TACAAAAATATTAGAGGAAG+TGG | - | 56975:8966-8985 | MS.gene071829:intron | 25.0% |
| ! | TATGTTAACAAATTGACTGT+TGG | - | 56975:7496-7515 | MS.gene071829:CDS | 25.0% |
| ! | TTAAATGAATATGGATCACT+TGG | + | 56975:7451-7470 | None:intergenic | 25.0% |
| !! | AATACATGTACATACCTTTT+TGG | + | 56975:8820-8839 | None:intergenic | 25.0% |
| !! | AATATTTCAAGTGTGAACAT+TGG | - | 56975:8483-8502 | MS.gene071829:intron | 25.0% |
| !! | ATTACTAAAGCTCATTTTGT+TGG | - | 56975:7825-7844 | MS.gene071829:CDS | 25.0% |
| !! | CAATGTGTGTTTATTTGTTA+AGG | - | 56975:9097-9116 | MS.gene071829:CDS | 25.0% |
| !! | CTTTTCAATGTGAAGAATTA+TGG | - | 56975:7130-7149 | MS.gene071829:CDS | 25.0% |
| !! | GTCATGTTTAATTAGTTTCT+AGG | - | 56975:7955-7974 | MS.gene071829:intron | 25.0% |
| !! | TCTGACAATAATTTTGTGTA+GGG | - | 56975:8912-8931 | MS.gene071829:intron | 25.0% |
| !! | TTACTAAAGCTCATTTTGTT+GGG | - | 56975:7826-7845 | MS.gene071829:CDS | 25.0% |
| !! | TTCTGACAATAATTTTGTGT+AGG | - | 56975:8911-8930 | MS.gene071829:intron | 25.0% |
| !!! | ATCGTTTTATTCAAAATGAG+AGG | - | 56975:7726-7745 | MS.gene071829:CDS | 25.0% |
| !!! | TGATTTTGATTTTAATGGTG+AGG | + | 56975:7990-8009 | None:intergenic | 25.0% |
| !!! | TGGATGAACTTTAAAATTGA+AGG | - | 56975:7412-7431 | MS.gene071829:CDS | 25.0% |
| AAAAACGATAAGGTAGAGTA+TGG | - | 56975:7868-7887 | MS.gene071829:CDS | 30.0% | |
| AAAATGCGAATGAATGAACA+TGG | + | 56975:7198-7217 | None:intergenic | 30.0% | |
| AACACAGATGGTATCAAAAT+AGG | - | 56975:8444-8463 | MS.gene071829:intron | 30.0% | |
| AAGTGTACAAATAAGCAATG+TGG | - | 56975:8941-8960 | MS.gene071829:intron | 30.0% | |
| ACACAGATGGTATCAAAATA+GGG | - | 56975:8445-8464 | MS.gene071829:intron | 30.0% | |
| AGAAGGGACATATATACTTA+AGG | - | 56975:7360-7379 | MS.gene071829:intron | 30.0% | |
| AGTATGGAAAAAGTAGAGAT+TGG | - | 56975:7884-7903 | MS.gene071829:CDS | 30.0% | |
| CATTGAAAAGCTTGTATTGA+CGG | + | 56975:7120-7139 | None:intergenic | 30.0% | |
| CTTAAGGAAGTTGTATTTAG+TGG | - | 56975:7376-7395 | MS.gene071829:intron | 30.0% | |
| GAAAATTACCACTCTATTGT+CGG | + | 56975:7176-7195 | None:intergenic | 30.0% | |
| GTCTCAATTGAAGAAAACTT+TGG | - | 56975:8701-8720 | MS.gene071829:CDS | 30.0% | |
| GTGGCTTACAAAAATATTAG+AGG | - | 56975:8960-8979 | MS.gene071829:intron | 30.0% | |
| GTTAAGAATTGTACCTTTAG+TGG | - | 56975:8645-8664 | MS.gene071829:CDS | 30.0% | |
| TAAGTATATATGTCCCTTCT+GGG | + | 56975:7360-7379 | None:intergenic | 30.0% | |
| TACTAGGAATGTTCGAATTT+CGG | - | 56975:8539-8558 | MS.gene071829:intron | 30.0% | |
| TATACCCTATGAAATTGATG+TGG | - | 56975:7649-7668 | MS.gene071829:CDS | 30.0% | |
| TGTGTATGAAGATATTGTGA+TGG | - | 56975:8737-8756 | MS.gene071829:CDS | 30.0% | |
| TTAAGTATATATGTCCCTTC+TGG | + | 56975:7361-7380 | None:intergenic | 30.0% | |
| ! | CTGACAATAATTTTGTGTAG+GGG | - | 56975:8913-8932 | MS.gene071829:intron | 30.0% |
| ! | GAGATAGAGTGTTTGTATTT+CGG | + | 56975:7911-7930 | None:intergenic | 30.0% |
| ! | TGACAATAATTTTGTGTAGG+GGG | - | 56975:8914-8933 | MS.gene071829:intron | 30.0% |
| !! | ATTTTGATACCATCTGTGTT+GGG | + | 56975:8444-8463 | None:intergenic | 30.0% |
| !!! | TATTTTGATACCATCTGTGT+TGG | + | 56975:8445-8464 | None:intergenic | 30.0% |
| !!! | TGAAGGCATTTTTAAAAGCA+TGG | - | 56975:7293-7312 | MS.gene071829:intron | 30.0% |
| ATCAAAATAGGGAGGTCAAA+TGG | - | 56975:8456-8475 | MS.gene071829:intron | 35.0% | |
| ATCTGCCACATCAATTTCAT+AGG | + | 56975:7657-7676 | None:intergenic | 35.0% | |
| GGTCAAAAGAACAAGCATTA+AGG | + | 56975:8067-8086 | None:intergenic | 35.0% | |
| GTTAACAAATTGACTGTTGG+TGG | - | 56975:7499-7518 | MS.gene071829:CDS | 35.0% | |
| TCTGCCACATCAATTTCATA+GGG | + | 56975:7656-7675 | None:intergenic | 35.0% | |
| ! | AAATTTGACTTCATCGCCAA+TGG | - | 56975:8309-8328 | MS.gene071829:intron | 35.0% |
| ! | ATGGTGTTAGAATCAAATCG+TGG | - | 56975:8676-8695 | MS.gene071829:CDS | 35.0% |
| ! | CTCATTTTGTTGGGAATTGA+GGG | - | 56975:7835-7854 | MS.gene071829:CDS | 35.0% |
| ! | GAGTGGAGGATATTAATTTG+CGG | - | 56975:9048-9067 | MS.gene071829:CDS | 35.0% |
| ! | TATCCTCCACTCTAATGTTT+TGG | + | 56975:9040-9059 | None:intergenic | 35.0% |
| ! | TGGTGTTAGAATCAAATCGT+GGG | - | 56975:8677-8696 | MS.gene071829:CDS | 35.0% |
| ! | TGTTGATAGATTCCATGTGA+TGG | + | 56975:8341-8360 | None:intergenic | 35.0% |
| ! | TTTTGATACCATCTGTGTTG+GGG | + | 56975:8443-8462 | None:intergenic | 35.0% |
| !! | TTTGTTAAGGGTGCTAGTTA+TGG | - | 56975:9110-9129 | MS.gene071829:CDS | 35.0% |
| !!! | CGAATTTCGGATGTTTTTTG+TGG | - | 56975:8552-8571 | MS.gene071829:intron | 35.0% |
| AATTATGGTGCACGTTCTGA+TGG | - | 56975:7145-7164 | MS.gene071829:CDS | 40.0% | |
| ACAATGTGATTGAGCTCAAG+CGG | - | 56975:7780-7799 | MS.gene071829:CDS | 40.0% | |
| ACCATGCCAAAACATTAGAG+TGG | - | 56975:9031-9050 | MS.gene071829:intron | 40.0% | |
| ACCTTTAGTGGCACAAGTAA+TGG | - | 56975:8657-8676 | MS.gene071829:CDS | 40.0% | |
| ATGCCAAAACATTAGAGTGG+AGG | - | 56975:9034-9053 | MS.gene071829:intron | 40.0% | |
| CAATGGTTATGTCCATCACA+TGG | - | 56975:8326-8345 | MS.gene071829:intron | 40.0% | |
| CAGATGGTATCAAAATAGGG+AGG | - | 56975:8448-8467 | MS.gene071829:intron | 40.0% | |
| CATAGCAATGCAATCATCAC+CGG | + | 56975:8511-8530 | None:intergenic | 40.0% | |
| GGAAGTCTTGGTAAGAATGA+AGG | - | 56975:8597-8616 | MS.gene071829:intron | 40.0% | |
| TCAAGTGTGAACATTGGAAC+CGG | - | 56975:8489-8508 | MS.gene071829:intron | 40.0% | |
| TGATTGCATTGCTATGCTCT+CGG | - | 56975:8515-8534 | MS.gene071829:intron | 40.0% | |
| ! | AACAAATTGACTGTTGGTGG+AGG | - | 56975:7502-7521 | MS.gene071829:CDS | 40.0% |
| ! | AAGTTCATCCAAGCATTGCA+TGG | + | 56975:7403-7422 | None:intergenic | 40.0% |
| ! | ACCATTACTTGTGCCACTAA+AGG | + | 56975:8661-8680 | None:intergenic | 40.0% |
| ! | AGTCTTTTACTACGACCAGA+AGG | + | 56975:9074-9093 | None:intergenic | 40.0% |
| ! | CAACTGTTTTCATCCCAGAA+GGG | - | 56975:7344-7363 | MS.gene071829:intron | 40.0% |
| ! | GCTCATTTTGTTGGGAATTG+AGG | - | 56975:7834-7853 | MS.gene071829:CDS | 40.0% |
| !! | CATGTGATGGACATAACCAT+TGG | + | 56975:8328-8347 | None:intergenic | 40.0% |
| !! | GATATTAATTTGCGGCCTTC+TGG | - | 56975:9056-9075 | MS.gene071829:CDS | 40.0% |
| !! | GTACATACCTTTTTGGTGCA+CGG | + | 56975:8813-8832 | None:intergenic | 40.0% |
| !!! | TCCACTCTAATGTTTTGGCA+TGG | + | 56975:9035-9054 | None:intergenic | 40.0% |
| AATGATAGCCCCAACACAGA+TGG | - | 56975:8432-8451 | MS.gene071829:intron | 45.0% | |
| AGTGATGCATGCAGATGGAA+TGG | - | 56975:7316-7335 | MS.gene071829:intron | 45.0% | |
| ATCTGTGTTGGGGCTATCAT+TGG | + | 56975:8433-8452 | None:intergenic | 45.0% | |
| ATGGTCAAGGATCTTCTGCT+TGG | - | 56975:7536-7555 | MS.gene071829:CDS | 45.0% | |
| CCTGGTCATGGAATTAGTGT+CGG | - | 56975:8576-8595 | MS.gene071829:intron | 45.0% | |
| GATTGCATTGCTATGCTCTC+GGG | - | 56975:8516-8535 | MS.gene071829:intron | 45.0% | |
| TCTGTGTTGGGGCTATCATT+GGG | + | 56975:8432-8451 | None:intergenic | 45.0% | |
| TGGCAATACCGACAATAGAG+TGG | - | 56975:7165-7184 | MS.gene071829:CDS | 45.0% | |
| TTAGTGGTCCATGCAATGCT+TGG | - | 56975:7392-7411 | MS.gene071829:intron | 45.0% | |
| ! | AAATTGACTGTTGGTGGAGG+TGG | - | 56975:7505-7524 | MS.gene071829:CDS | 45.0% |
| ! | GCAACTGTTTTCATCCCAGA+AGG | - | 56975:7343-7362 | MS.gene071829:intron | 45.0% |
| ! | GGAATTAGTGTCGGAAGTCT+TGG | - | 56975:8585-8604 | MS.gene071829:intron | 45.0% |
| ! | TGCAAGAAGGGGGATTTTGT+TGG | + | 56975:9136-9155 | None:intergenic | 45.0% |
| !!! | GTTTTTTGTGGTCCTGGTCA+TGG | - | 56975:8564-8583 | MS.gene071829:intron | 45.0% |
| !!! | TCGGATGTTTTTTGTGGTCC+TGG | - | 56975:8558-8577 | MS.gene071829:intron | 45.0% |
| !!! | ATGTATTTTTTTTTAAATAA+TGG | + | 56975:8192-8211 | None:intergenic | 5.0% |
| !!! | ATTTTGTTATTAAAAATTAA+GGG | + | 56975:7701-7720 | None:intergenic | 5.0% |
| !!! | TATTTTGTTATTAAAAATTA+AGG | + | 56975:7702-7721 | None:intergenic | 5.0% |
| !!! | TTAAAATTTTATATATTTTG+TGG | - | 56975:8266-8285 | MS.gene071829:intron | 5.0% |
| CATGGAGTGATGCATGCAGA+TGG | - | 56975:7311-7330 | MS.gene071829:intron | 50.0% | |
| CCGACACTAATTCCATGACC+AGG | + | 56975:8579-8598 | None:intergenic | 50.0% | |
| CTGTGTTGGGGCTATCATTG+GGG | + | 56975:8431-8450 | None:intergenic | 50.0% | |
| TGTGTTGGGGCTATCATTGG+GGG | + | 56975:8430-8449 | None:intergenic | 50.0% | |
| TTGCTATGCTCTCGGGTACT+AGG | - | 56975:8523-8542 | MS.gene071829:intron | 50.0% | |
| !! | CATACCTTTTTGGTGCACGG+AGG | + | 56975:8810-8829 | None:intergenic | 50.0% |
| ACGTCCTCCGTGCACCAAAA+AGG | - | 56975:8803-8822 | MS.gene071829:CDS | 55.0% | |
| GGTGGCAGATTGGATGGTCA+AGG | - | 56975:7523-7542 | MS.gene071829:CDS | 55.0% | |
| ! | TGTTGGTGGAGGTGGCAGAT+TGG | - | 56975:7513-7532 | MS.gene071829:CDS | 55.0% |
| !! | TTTTTGGTGCACGGAGGACG+TGG | + | 56975:8804-8823 | None:intergenic | 55.0% |
| GGTGGAGGTGGCAGATTGGA+TGG | - | 56975:7517-7536 | MS.gene071829:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56975 | gene | 7061 | 9163 | 7061 | ID=MS.gene071829 |
| 56975 | mRNA | 7061 | 9163 | 7061 | ID=MS.gene071829.t1;Parent=MS.gene071829 |
| 56975 | exon | 9038 | 9163 | 9038 | ID=MS.gene071829.t1.exon1;Parent=MS.gene071829.t1 |
| 56975 | CDS | 9038 | 9163 | 9038 | ID=cds.MS.gene071829.t1;Parent=MS.gene071829.t1 |
| 56975 | exon | 8618 | 8926 | 8618 | ID=MS.gene071829.t1.exon2;Parent=MS.gene071829.t1 |
| 56975 | CDS | 8618 | 8926 | 8618 | ID=cds.MS.gene071829.t1;Parent=MS.gene071829.t1 |
| 56975 | exon | 7400 | 7921 | 7400 | ID=MS.gene071829.t1.exon3;Parent=MS.gene071829.t1 |
| 56975 | CDS | 7400 | 7921 | 7400 | ID=cds.MS.gene071829.t1;Parent=MS.gene071829.t1 |
| 56975 | exon | 7061 | 7291 | 7061 | ID=MS.gene071829.t1.exon4;Parent=MS.gene071829.t1 |
| 56975 | CDS | 7061 | 7291 | 7061 | ID=cds.MS.gene071829.t1;Parent=MS.gene071829.t1 |
| Gene Sequence |
| Protein sequence |
