AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018971

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018971.t1 MTR_3g438050 93.146 321 22 0 1 321 1 321 0.0 615
MS.gene018971.t1 MTR_8g030930 62.963 324 115 4 1 320 1 323 1.93e-140 404
MS.gene018971.t1 MTR_5g063430 59.375 320 122 4 1 319 1 313 1.93e-135 388
MS.gene018971.t1 MTR_1g088160 47.079 291 147 5 26 311 34 322 5.66e-88 270
MS.gene018971.t1 MTR_2g058840 43.373 332 158 7 9 325 12 328 2.48e-85 264
MS.gene018971.t1 MTR_2g058670 43.373 332 160 8 9 325 12 330 1.44e-84 262
MS.gene018971.t1 MTR_5g097860 41.935 310 167 6 25 325 23 328 5.53e-80 248
MS.gene018971.t1 MTR_2g058640 40.181 331 172 7 9 325 12 330 7.79e-80 249
MS.gene018971.t1 MTR_2g435640 42.484 306 168 5 26 325 52 355 7.53e-78 245
MS.gene018971.t1 MTR_2g049400 40.823 316 180 4 7 320 8 318 2.80e-76 240
MS.gene018971.t1 MTR_4g083660 41.463 328 178 8 21 341 3 323 8.23e-76 238
MS.gene018971.t1 MTR_6g028080 42.628 312 156 9 15 313 20 321 6.53e-75 236
MS.gene018971.t1 MTR_4g120320 41.368 307 171 5 26 325 51 355 1.32e-72 231
MS.gene018971.t1 MTR_4g084050 41.534 313 164 6 8 311 4 306 1.35e-70 225
MS.gene018971.t1 MTR_8g009810 40.426 329 174 10 6 324 19 335 2.71e-69 222
MS.gene018971.t1 MTR_8g008765 38.585 311 176 5 5 311 9 308 9.18e-69 219
MS.gene018971.t1 MTR_2g103650 39.879 331 182 10 7 325 8 333 2.29e-68 220
MS.gene018971.t1 MTR_8g010080 38.782 312 176 7 5 311 7 308 3.51e-68 219
MS.gene018971.t1 MTR_3g054320 42.905 296 152 7 27 313 30 317 8.69e-68 218
MS.gene018971.t1 MTR_5g043350 41.176 323 165 9 6 314 7 318 1.18e-67 218
MS.gene018971.t1 MTR_8g010070 40.446 314 170 8 5 311 7 310 2.29e-67 217
MS.gene018971.t1 MTR_7g091840 37.920 327 183 8 25 344 63 376 3.37e-67 216
MS.gene018971.t1 MTR_3g084380 39.937 318 172 8 11 314 1 313 4.09e-67 216
MS.gene018971.t1 MTR_1g052315 41.722 302 165 6 27 322 64 360 8.78e-67 217
MS.gene018971.t1 MTR_3g030540 44.444 297 153 8 25 315 68 358 8.86e-67 216
MS.gene018971.t1 MTR_7g091850 40.067 297 169 5 21 312 70 362 2.09e-66 216
MS.gene018971.t1 MTR_8g065030 39.404 302 172 6 26 320 64 361 4.28e-66 216
MS.gene018971.t1 MTR_2g103410 38.742 302 173 6 27 320 59 356 4.52e-66 215
MS.gene018971.t1 MTR_8g010110 40.345 290 159 6 26 311 30 309 1.43e-64 209
MS.gene018971.t1 MTR_8g010040 40.550 291 159 6 25 311 30 310 2.07e-64 209
MS.gene018971.t1 MTR_3g084360 38.650 326 182 6 6 322 3 319 3.15e-64 209
MS.gene018971.t1 MTR_7g035415 36.709 316 179 9 6 311 16 320 3.83e-64 207
MS.gene018971.t1 MTR_1g086390 38.462 312 173 7 24 320 78 385 1.38e-63 209
MS.gene018971.t1 MTR_2g100040 38.978 313 153 7 2 310 3 281 2.34e-63 206
MS.gene018971.t1 MTR_2g060350 42.295 305 156 10 17 312 68 361 5.00e-63 207
MS.gene018971.t1 MTR_6g005630 35.583 326 191 8 5 319 17 334 1.38e-62 205
MS.gene018971.t1 MTR_8g010090 38.276 290 165 6 26 311 30 309 2.37e-62 204
MS.gene018971.t1 MTR_7g110050 36.859 312 179 7 23 320 63 370 1.48e-59 198
MS.gene018971.t1 MTR_0157s0060 42.561 289 145 8 30 311 1 275 9.02e-59 194
MS.gene018971.t1 MTR_4g034020 42.561 289 145 8 30 311 1 275 9.02e-59 194
MS.gene018971.t1 MTR_2g029170 42.857 266 140 8 61 320 30 289 1.14e-58 193
MS.gene018971.t1 MTR_4g094715 36.364 308 179 5 26 320 64 367 2.49e-58 195
MS.gene018971.t1 MTR_2g103410 37.226 274 164 4 27 293 59 331 3.51e-57 189
MS.gene018971.t1 MTR_8g077320 38.870 301 141 8 25 311 31 302 4.10e-57 189
MS.gene018971.t1 MTR_8g010050 40.357 280 153 8 5 277 7 279 2.40e-56 187
MS.gene018971.t1 MTR_5g033680 33.435 329 202 5 25 341 57 380 7.04e-56 189
MS.gene018971.t1 MTR_5g034090 32.571 350 199 7 27 342 121 467 1.54e-55 189
MS.gene018971.t1 MTR_1g012390 36.170 329 196 10 6 324 4 328 2.32e-55 186
MS.gene018971.t1 MTR_8g065010 33.333 342 191 8 24 332 104 441 1.35e-52 181
MS.gene018971.t1 MTR_1g013730 33.232 328 193 9 6 324 3 313 1.50e-51 175
MS.gene018971.t1 MTR_1g013740 31.707 328 198 8 6 324 11 321 3.00e-49 169
MS.gene018971.t1 MTR_2g032710 35.065 308 183 5 26 320 66 369 5.81e-49 171
MS.gene018971.t1 MTR_5g034090 34.629 283 154 5 27 278 121 403 1.20e-48 169
MS.gene018971.t1 MTR_6g005630 32.515 326 178 9 5 319 17 311 2.25e-48 167
MS.gene018971.t1 MTR_8g008700 38.428 229 127 4 86 311 14 231 9.16e-45 155
MS.gene018971.t1 MTR_7g113910 38.819 237 110 7 87 320 74 278 3.69e-43 153
MS.gene018971.t1 MTR_8g031180 34.426 244 130 6 87 326 15 232 2.05e-32 122
MS.gene018971.t1 MTR_7g072360 43.119 109 40 1 169 277 42 128 2.36e-22 91.3
MS.gene018971.t1 MTR_7g072370 57.377 61 26 0 222 282 1 61 3.05e-17 75.5
MS.gene018971.t1 MTR_3g449590 24.340 341 205 11 25 335 45 362 3.21e-12 67.8
MS.gene018971.t1 MTR_7g088550 24.415 299 181 9 12 277 41 327 9.45e-12 66.2
MS.gene018971.t1 MTR_4g120730 24.281 313 191 10 28 305 41 342 1.55e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018971.t1 AT2G15460 50.938 320 152 5 5 322 11 327 1.21e-104 313
MS.gene018971.t1 AT2G15450 50.625 320 153 5 5 322 11 327 1.28e-103 310
MS.gene018971.t1 AT2G33160 50.621 322 155 4 8 327 14 333 1.70e-103 318
MS.gene018971.t1 AT1G43090 50.157 319 155 4 6 322 11 327 5.08e-103 310
MS.gene018971.t1 AT1G43080 49.216 319 158 4 6 322 11 327 1.52e-102 307
MS.gene018971.t1 AT2G15470 50.313 320 154 5 5 322 11 327 2.73e-102 307
MS.gene018971.t1 AT4G13760 48.589 319 160 4 6 322 11 327 9.92e-102 305
MS.gene018971.t1 AT1G17150 49.684 316 156 3 5 319 12 325 1.04e-101 305
MS.gene018971.t1 AT2G40310 49.530 319 157 4 6 322 11 327 5.94e-101 303
MS.gene018971.t1 AT1G43100 49.216 319 158 4 6 322 11 327 8.95e-100 302
MS.gene018971.t1 AT2G26620 51.447 311 147 4 14 322 19 327 2.51e-98 296
MS.gene018971.t1 AT1G78400 50.680 294 143 2 26 318 34 326 3.69e-98 296
MS.gene018971.t1 AT2G43880 45.302 298 155 5 27 321 31 323 2.20e-88 269
MS.gene018971.t1 AT2G43880 45.395 304 155 6 27 324 31 329 9.37e-88 269
MS.gene018971.t1 AT3G07830 40.367 327 185 3 2 324 1 321 1.53e-86 266
MS.gene018971.t1 AT5G48140 42.947 319 168 5 6 324 11 315 4.94e-85 262
MS.gene018971.t1 AT3G07820 42.444 311 168 3 23 324 7 315 1.24e-84 261
MS.gene018971.t1 AT3G07840 44.211 285 157 2 40 324 34 316 3.08e-84 261
MS.gene018971.t1 AT1G05650 43.354 316 169 6 5 317 8 316 4.85e-84 260
MS.gene018971.t1 AT2G43890 40.854 328 182 7 6 327 9 330 6.46e-84 259
MS.gene018971.t1 AT2G43870 43.302 321 164 8 6 321 7 314 1.49e-82 256
MS.gene018971.t1 AT4G18180 40.854 328 181 6 26 342 38 363 3.99e-82 256
MS.gene018971.t1 AT1G02790 39.521 334 187 5 2 324 16 345 2.57e-81 254
MS.gene018971.t1 AT1G05660 41.818 330 173 8 5 325 8 327 3.63e-81 253
MS.gene018971.t1 AT3G59850 46.512 301 149 8 27 321 23 317 8.06e-81 251
MS.gene018971.t1 AT3G59850 46.205 303 151 8 25 321 65 361 9.58e-81 253
MS.gene018971.t1 AT3G14040 44.481 308 154 6 27 324 71 371 3.36e-75 239
MS.gene018971.t1 AT3G07850 43.354 316 162 6 19 324 62 370 1.69e-74 237
MS.gene018971.t1 AT5G17200 42.405 316 161 6 6 311 12 316 3.87e-73 233
MS.gene018971.t1 AT3G57510 40.379 317 178 6 11 320 52 364 1.28e-72 231
MS.gene018971.t1 AT1G80170 40.323 310 173 6 19 320 45 350 2.34e-72 231
MS.gene018971.t1 AT2G41850 40.968 310 172 6 18 320 59 364 6.99e-71 227
MS.gene018971.t1 AT3G07970 43.836 292 153 7 27 312 71 357 1.34e-69 224
MS.gene018971.t1 AT4G35670 41.781 292 155 6 27 311 24 307 2.64e-68 219
MS.gene018971.t1 AT2G43860 41.479 311 170 7 16 320 22 326 3.39e-68 219
MS.gene018971.t1 AT3G15720 39.339 333 177 9 7 334 9 321 5.11e-66 215
MS.gene018971.t1 AT3G15720 39.339 333 177 9 7 334 10 322 5.70e-66 215
MS.gene018971.t1 AT1G65570 40.881 318 174 9 4 313 6 317 8.09e-65 210
MS.gene018971.t1 AT3G15720 39.339 333 174 9 7 334 9 318 1.41e-64 211
MS.gene018971.t1 AT1G80170 38.869 283 163 5 19 294 45 324 3.94e-64 206
MS.gene018971.t1 AT1G02460 37.061 313 175 7 26 320 88 396 2.83e-63 209
MS.gene018971.t1 AT5G44840 39.172 314 169 10 6 311 8 307 1.09e-62 205
MS.gene018971.t1 AT3G26610 36.000 325 195 5 26 341 66 386 3.49e-61 203
MS.gene018971.t1 AT1G23460 36.656 311 183 7 25 325 41 347 4.81e-61 202
MS.gene018971.t1 AT1G23460 36.656 311 183 7 25 325 65 371 8.01e-61 202
MS.gene018971.t1 AT1G48100 35.535 318 190 3 26 331 79 393 1.60e-59 199
MS.gene018971.t1 AT1G70500 35.161 310 188 7 19 320 59 363 2.88e-59 198
MS.gene018971.t1 AT5G14650 37.742 310 180 8 17 320 41 343 3.09e-59 197
MS.gene018971.t1 AT5G27530 40.339 295 147 10 26 311 52 326 9.01e-59 196
MS.gene018971.t1 AT5G39910 34.877 324 173 7 1 306 1 304 4.36e-58 192
MS.gene018971.t1 AT1G10640 33.626 342 193 6 24 334 116 454 2.06e-56 192
MS.gene018971.t1 AT4G01890 34.185 313 184 7 26 320 64 372 5.60e-56 189
MS.gene018971.t1 AT1G56710 36.129 310 179 6 26 320 47 352 1.33e-55 187
MS.gene018971.t1 AT1G60590 32.456 342 194 6 27 334 123 461 6.58e-54 185
MS.gene018971.t1 AT3G15720 40.590 271 143 7 68 334 2 258 9.39e-53 179
MS.gene018971.t1 AT4G32370 36.825 315 163 13 41 342 49 340 1.19e-52 177
MS.gene018971.t1 AT5G14650 38.433 268 155 7 17 278 41 304 6.72e-51 172
MS.gene018971.t1 AT5G44830 39.474 266 134 9 54 311 2 248 3.07e-50 171
MS.gene018971.t1 AT4G32380 36.396 283 164 6 41 316 41 314 6.56e-50 173
MS.gene018971.t1 AT1G80140 36.879 282 161 7 61 334 3 275 6.28e-46 159
MS.gene018971.t1 AT4G32380 33.000 300 184 6 41 333 41 330 6.92e-46 161
MS.gene018971.t1 AT4G35670 42.029 207 112 2 105 311 2 200 1.56e-45 157
MS.gene018971.t1 AT4G32375 38.967 213 121 2 100 312 8 211 1.11e-44 158
MS.gene018971.t1 AT5G41870 26.019 319 183 12 6 277 10 322 5.39e-17 82.0
MS.gene018971.t1 AT2G23900 25.352 284 166 11 31 277 60 334 2.09e-13 71.2
MS.gene018971.t1 AT4G23820 25.079 315 188 12 5 277 9 317 1.47e-12 68.6
MS.gene018971.t1 AT1G19170 24.695 328 189 12 26 311 86 397 6.43e-12 67.0
MS.gene018971.t1 AT3G62110 25.316 316 196 12 28 311 44 351 6.53e-12 66.6
MS.gene018971.t1 AT3G62110 25.316 316 196 12 28 311 44 351 6.53e-12 66.6

Find 62 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCATATATGTTCCTTT+TGG 0.225532 3.3:+29440789 None:intergenic
ATTGGAAGACGGGGACAATT+AGG 0.285173 3.3:+29440567 None:intergenic
CATTTATCAGTCGCAAAATA+TGG 0.292416 3.3:+29440690 None:intergenic
GATCCCAAAAGGAACATATA+TGG 0.319723 3.3:-29440793 MS.gene018971:CDS
TTATTGCTGCAACCACGATT+TGG 0.338462 3.3:+29439051 None:intergenic
GGAAGTCTTGGAAAGTTTGA+TGG 0.385210 3.3:-29439255 MS.gene018971:CDS
TCCCCTCACTAAAACTTTGA+AGG 0.385919 3.3:-29439148 MS.gene018971:CDS
CAAAATTGAAGGGACCTTGA+AGG 0.390336 3.3:-29440724 MS.gene018971:CDS
TTGGAAGACGGGGACAATTA+GGG 0.408182 3.3:+29440568 None:intergenic
TGCTATTAAAAGATCTCAAA+TGG 0.416555 3.3:+29439511 None:intergenic
GTGAAGCAAGTAATCTTCAT+TGG 0.433473 3.3:-29440771 MS.gene018971:CDS
GGAGTTAGCATTGGAAGTCT+TGG 0.434803 3.3:-29439267 MS.gene018971:CDS
AAATCGTGGTTGCAGCAATA+AGG 0.436370 3.3:-29439049 MS.gene018971:intron
TCTGTGTTTGGGCTATCACC+CGG 0.444875 3.3:+29439423 None:intergenic
TGGACAACTTTCAAAATTGA+AGG 0.449368 3.3:-29440735 MS.gene018971:CDS
TGGATCAGTTGGAGCCTTCA+AGG 0.450279 3.3:+29440710 None:intergenic
AATTTGATCGTGAGTGGACC+TGG 0.453283 3.3:-29440645 MS.gene018971:CDS
CTGTGTTTGGGCTATCACCC+GGG 0.456362 3.3:+29439424 None:intergenic
GATTGTATCGCGATGGTCTC+TGG 0.456978 3.3:-29439336 MS.gene018971:CDS
TAGGAACTGCACTCGGAGTA+AGG 0.459953 3.3:+29437616 None:intergenic
ATTGGATGGTCAAGGATCTT+CGG 0.463981 3.3:-29440619 MS.gene018971:CDS
TATTCTTGATCAATAAGAAT+GGG 0.473017 3.3:+29439078 None:intergenic
ATTAAGCTTTCAAAAGATGT+AGG 0.476504 3.3:-29437662 MS.gene018971:CDS
CGTGAGTGGACCTGGGACAT+TGG 0.479525 3.3:-29440637 MS.gene018971:CDS
ACCTTTAGTGACACAACTAA+TGG 0.486200 3.3:-29439195 MS.gene018971:CDS
AAAGTTGTCCATCCTTTGCA+TGG 0.492583 3.3:+29440747 None:intergenic
CGAACAAGGTATTTCAAGCT+AGG 0.496036 3.3:+29437597 None:intergenic
AGTGATGCATGCAAATCAAA+TGG 0.505240 3.3:-29440831 MS.gene018971:CDS
TGAACTTACAATTGGAAGAC+GGG 0.511895 3.3:+29440557 None:intergenic
AAAAGATCTCAAATGGTGAA+TGG 0.512142 3.3:+29439518 None:intergenic
GTCGCAAAATATGGATCAGT+TGG 0.512826 3.3:+29440699 None:intergenic
TCTCTGGCACTAGAAATGTT+TGG 0.514832 3.3:-29439320 MS.gene018971:CDS
ATATTCTTGATCAATAAGAA+TGG 0.516058 3.3:+29439077 None:intergenic
ATGGTCTTAGAATTAAGACT+TGG 0.524419 3.3:-29439176 MS.gene018971:CDS
ACCATTAGTTGTGTCACTAA+AGG 0.526950 3.3:+29439194 None:intergenic
ATGGTCAAGGATCTTCGGCT+TGG 0.534419 3.3:-29440614 MS.gene018971:CDS
CCTGGACATGGAGTTAGCAT+TGG 0.543703 3.3:-29439276 MS.gene018971:CDS
AAAACATCTTATCGTACTCA+TGG 0.544853 3.3:+29437639 None:intergenic
AACTACGGTGCAATCGCAGA+TGG 0.556221 3.3:-29440988 MS.gene018971:CDS
GTGAATAATTTGATCGTGAG+TGG 0.559550 3.3:-29440651 MS.gene018971:CDS
TGTGACAAAATCAAATGTCA+TGG 0.564891 3.3:+29439548 None:intergenic
TGGAGAAACTGATAATAAAG+AGG 0.567699 3.3:-29440968 MS.gene018971:intron
GGACAACTTTCAAAATTGAA+GGG 0.567850 3.3:-29440734 MS.gene018971:CDS
TCATTGGACCATGCAAAGGA+TGG 0.568404 3.3:-29440755 MS.gene018971:CDS
AAAATCAGAATTTCAGCCCC+GGG 0.568624 3.3:-29439441 MS.gene018971:CDS
TGGTCTTAGAATTAAGACTT+GGG 0.575173 3.3:-29439175 MS.gene018971:CDS
CCTTGACCATCCAATGTCCC+AGG 0.577038 3.3:+29440627 None:intergenic
TCAAGGATCTTCGGCTTGGT+CGG 0.577538 3.3:-29440610 MS.gene018971:CDS
GGTGATAGCCCAAACACAGA+TGG 0.580283 3.3:-29439420 MS.gene018971:CDS
TTCAAGCTAGGAACTGCACT+CGG 0.581844 3.3:+29437609 None:intergenic
ATCTTCATTGGACCATGCAA+AGG 0.586443 3.3:-29440759 MS.gene018971:CDS
AGTGGACCTGGGACATTGGA+TGG 0.596328 3.3:-29440633 MS.gene018971:CDS
ATGAACTTACAATTGGAAGA+CGG 0.597247 3.3:+29440556 None:intergenic
CCTGGGACATTGGATGGTCA+AGG 0.604515 3.3:-29440627 MS.gene018971:CDS
CCAATGCTAACTCCATGTCC+AGG 0.604684 3.3:+29439276 None:intergenic
CGGTGATGATTGTATCGCGA+TGG 0.613310 3.3:-29439343 MS.gene018971:CDS
CAAGAATATTGTCCAAATCG+TGG 0.629259 3.3:-29439063 MS.gene018971:CDS
TGTGTTTGGGCTATCACCCG+GGG 0.645369 3.3:+29439425 None:intergenic
ATTTGATCGTGAGTGGACCT+GGG 0.645399 3.3:-29440644 MS.gene018971:CDS
CATCGCGATACAATCATCAC+CGG 0.669257 3.3:+29439344 None:intergenic
AGATATTGTGATGAATAACG+TGG 0.711571 3.3:-29439106 MS.gene018971:CDS
GAACTTACAATTGGAAGACG+GGG 0.712367 3.3:+29440558 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATTTATTTATTTAT+TGG + chr3.3:29440509-29440528 None:intergenic 0.0%
!! TTTAAATTTAATATTAAATT+AGG + chr3.3:29439685-29439704 None:intergenic 0.0%
!! ATAAATAAGATTAAAATCTA+AGG - chr3.3:29438690-29438709 MS.gene018971:intron 10.0%
!! TAAATAAATAAATAATCACT+AGG - chr3.3:29440514-29440533 MS.gene018971:intron 10.0%
!! TAAATAAGATTAAAATCTAA+GGG - chr3.3:29438691-29438710 MS.gene018971:intron 10.0%
!! TAGAAATAAAAAATAAAATG+TGG + chr3.3:29438853-29438872 None:intergenic 10.0%
!!! AATATGATTTATCTTTTTAA+CGG - chr3.3:29439017-29439036 MS.gene018971:intron 10.0%
!!! AATATTATTGTTTTTTTTAG+AGG - chr3.3:29440383-29440402 MS.gene018971:intron 10.0%
!!! GTAGAATATAATTTTTTTTA+AGG + chr3.3:29438183-29438202 None:intergenic 10.0%
!! AAATGTAACATTTAACATAT+TGG + chr3.3:29439050-29439069 None:intergenic 15.0%
!! AGAAAAATATTTAACACTAT+AGG + chr3.3:29440279-29440298 None:intergenic 15.0%
!! GTTAAAAAGATAAATCATAT+TGG + chr3.3:29439018-29439037 None:intergenic 15.0%
!! TATAATAAGTTAACAACTAA+TGG - chr3.3:29440678-29440697 MS.gene018971:CDS 15.0%
!! TATATGTTTAAATGTTAATG+AGG + chr3.3:29440635-29440654 None:intergenic 15.0%
!! TTAATATTAAATTAGGATGT+AGG + chr3.3:29439678-29439697 None:intergenic 15.0%
!! TTTAAGAAATAAAAAAGAGA+AGG + chr3.3:29437770-29437789 None:intergenic 15.0%
!!! ATATGATTTATCTTTTTAAC+GGG - chr3.3:29439018-29439037 MS.gene018971:intron 15.0%
!!! ATTTTTAGGATATCTAATTT+TGG - chr3.3:29439926-29439945 MS.gene018971:intron 15.0%
!!! ATTTTTTTTAAGGATATCTA+TGG + chr3.3:29438173-29438192 None:intergenic 15.0%
!!! TGTTATTATCATTTTTTTGA+AGG - chr3.3:29440426-29440445 MS.gene018971:intron 15.0%
!!! TTTTTAGGATATCTAATTTT+GGG - chr3.3:29439927-29439946 MS.gene018971:intron 15.0%
!! AAAAAAATACAAACTCTCTA+TGG + chr3.3:29439845-29439864 None:intergenic 20.0%
!! AAGAGAATAACAAATTAGTT+AGG + chr3.3:29437809-29437828 None:intergenic 20.0%
!! ATATTCTTGATCAATAAGAA+TGG + chr3.3:29439614-29439633 None:intergenic 20.0%
!! GGTTATAAGAAATATAATGA+AGG - chr3.3:29440535-29440554 MS.gene018971:intron 20.0%
!! TAATTGAAGCATATATTCTA+TGG - chr3.3:29438967-29438986 MS.gene018971:intron 20.0%
!! TATTCTTGATCAATAAGAAT+GGG + chr3.3:29439613-29439632 None:intergenic 20.0%
!! TGTTATTCTCTTGTAAATAT+AGG - chr3.3:29437817-29437836 MS.gene018971:intron 20.0%
!! TTAACATGATATTAATGCAT+TGG - chr3.3:29439098-29439117 MS.gene018971:CDS 20.0%
!! TTAATAGATGAACTTACAAT+TGG + chr3.3:29438142-29438161 None:intergenic 20.0%
!! TTTATTGAATTATGACTTCA+TGG - chr3.3:29440950-29440969 MS.gene018971:intron 20.0%
!!! AAAGATAAATCATATTGGTT+TGG + chr3.3:29439013-29439032 None:intergenic 20.0%
!!! AAAGGTAAAATTTTGATTTG+AGG - chr3.3:29439894-29439913 MS.gene018971:intron 20.0%
!!! GTTTTTAATGTGTTAAACTA+CGG - chr3.3:29437685-29437704 MS.gene018971:intron 20.0%
!!! TAGTTTTAAATTCCTTTGTT+AGG - chr3.3:29438368-29438387 MS.gene018971:intron 20.0%
!!! TGAGGTTTACTAATATTTTT+AGG - chr3.3:29439912-29439931 MS.gene018971:intron 20.0%
!!! TTATTGGCTAACATTAATTT+CGG + chr3.3:29438606-29438625 None:intergenic 20.0%
!!! TTATTGTTTTTTTTAGAGGA+AGG - chr3.3:29440387-29440406 MS.gene018971:intron 20.0%
!!! TTTCACGATTTATTTTCATA+TGG + chr3.3:29438781-29438800 None:intergenic 20.0%
!!! TTTTTGAAAGATAAAGTGAA+GGG - chr3.3:29438314-29438333 MS.gene018971:intron 20.0%
!!! TTTTTTGAAAGATAAAGTGA+AGG - chr3.3:29438313-29438332 MS.gene018971:intron 20.0%
! AAAATGCTAGATATCAAGAA+TGG + chr3.3:29438758-29438777 None:intergenic 25.0%
! AAAGGATCTTCAATTCTTTA+TGG - chr3.3:29440461-29440480 MS.gene018971:intron 25.0%
! AACACAGATGGAATAAAAAT+AGG - chr3.3:29439280-29439299 MS.gene018971:CDS 25.0%
! AATAATAATCCCTTCACTTT+AGG + chr3.3:29438286-29438305 None:intergenic 25.0%
! AATTGGCAGAAATTAGATTA+TGG + chr3.3:29440022-29440041 None:intergenic 25.0%
! ATAAAAATAGGCAAGTCAAA+CGG - chr3.3:29439292-29439311 MS.gene018971:CDS 25.0%
! ATAATAATCCCTTCACTTTA+GGG + chr3.3:29438285-29438304 None:intergenic 25.0%
! ATTAAGCTTTCAAAAGATGT+AGG - chr3.3:29441026-29441045 MS.gene018971:CDS 25.0%
! GTAAAAGAAAACTAAACAAC+TGG - chr3.3:29440203-29440222 MS.gene018971:intron 25.0%
! TAGATTATGGTACATATGTA+AGG + chr3.3:29440009-29440028 None:intergenic 25.0%
! TATTCCAATTTATTTCCTCT+TGG + chr3.3:29438248-29438267 None:intergenic 25.0%
! TGCTATTAAAAGATCTCAAA+TGG + chr3.3:29439180-29439199 None:intergenic 25.0%
! TTAAATTCCTTTGTTAGGAT+TGG - chr3.3:29438373-29438392 MS.gene018971:intron 25.0%
! TTAACCAAGAGGAAATAAAT+TGG - chr3.3:29438241-29438260 MS.gene018971:intron 25.0%
! TTCTTTATGGTATAATCACT+AGG - chr3.3:29440474-29440493 MS.gene018971:intron 25.0%
!! AGTTTTCTTTTACCATCATT+AGG + chr3.3:29440196-29440215 None:intergenic 25.0%
!! ATTTTTATTCCATCTGTGTT+TGG + chr3.3:29439280-29439299 None:intergenic 25.0%
!! TATTGGCTAACATTAATTTC+GGG + chr3.3:29438605-29438624 None:intergenic 25.0%
!! TTGAGATCTTTTAATAGCAA+AGG - chr3.3:29439181-29439200 MS.gene018971:CDS 25.0%
!! TTTTTATTCCATCTGTGTTT+GGG + chr3.3:29439279-29439298 None:intergenic 25.0%
!!! ACATTTGATTTTGTCACAAA+TGG - chr3.3:29439145-29439164 MS.gene018971:CDS 25.0%
!!! GTATCATGATTTTGATTTGA+TGG + chr3.3:29438525-29438544 None:intergenic 25.0%
!!! TACATATGTTTTTAACCAAG+AGG - chr3.3:29438230-29438249 MS.gene018971:intron 25.0%
!!! TGGTTCTAATTGTTTAGTAT+TGG - chr3.3:29440990-29441009 MS.gene018971:CDS 25.0%
AAAACATCTTATCGTACTCA+TGG + chr3.3:29441052-29441071 None:intergenic 30.0%
AAAAGATCTCAAATGGTGAA+TGG + chr3.3:29439173-29439192 None:intergenic 30.0%
AAATATAATGAAGGTCAGTC+CGG - chr3.3:29440544-29440563 MS.gene018971:intron 30.0%
AATAACCAGCACAATAAAGA+AGG + chr3.3:29439869-29439888 None:intergenic 30.0%
AATCTTTATCAACCATGACA+AGG + chr3.3:29440901-29440920 None:intergenic 30.0%
ACTATTAAAAACGCGAACAT+TGG - chr3.3:29439319-29439338 MS.gene018971:CDS 30.0%
AGATATTGTGATGAATAACG+TGG - chr3.3:29439582-29439601 MS.gene018971:intron 30.0%
ATAAACAAAATCTGAGTGGT+TGG - chr3.3:29440925-29440944 MS.gene018971:intron 30.0%
ATATTCTACAGATCGATCAA+TGG - chr3.3:29438194-29438213 MS.gene018971:intron 30.0%
ATGAACTTACAATTGGAAGA+CGG + chr3.3:29438135-29438154 None:intergenic 30.0%
ATTGAATTATGACTTCATGG+TGG - chr3.3:29440953-29440972 MS.gene018971:intron 30.0%
ATTTAACACTATAGGCAAGA+TGG + chr3.3:29440271-29440290 None:intergenic 30.0%
CATTTATCAGTCGCAAAATA+TGG + chr3.3:29438001-29438020 None:intergenic 30.0%
CCTAATAAACAAAATCTGAG+TGG - chr3.3:29440921-29440940 MS.gene018971:intron 30.0%
GAGGAAATAAATTGGAATAG+CGG - chr3.3:29438249-29438268 MS.gene018971:intron 30.0%
GATTAAAATCTCAACACATG+TGG + chr3.3:29440838-29440857 None:intergenic 30.0%
GGACAACTTTCAAAATTGAA+GGG - chr3.3:29437954-29437973 MS.gene018971:intron 30.0%
TAAAAATAGGCAAGTCAAAC+GGG - chr3.3:29439293-29439312 MS.gene018971:CDS 30.0%
TAGATTGCCTTCAATCTTAA+TGG - chr3.3:29440760-29440779 MS.gene018971:CDS 30.0%
TGAAGGATCTTCATGTTTAA+AGG - chr3.3:29440443-29440462 MS.gene018971:intron 30.0%
TGGACAACTTTCAAAATTGA+AGG - chr3.3:29437953-29437972 MS.gene018971:intron 30.0%
TGGAGAAACTGATAATAAAG+AGG - chr3.3:29437720-29437739 MS.gene018971:intron 30.0%
TGTGACAAAATCAAATGTCA+TGG + chr3.3:29439143-29439162 None:intergenic 30.0%
TTAGGATTGGAGGAATAATT+GGG - chr3.3:29438386-29438405 MS.gene018971:intron 30.0%
TTATAACAAAATGTGATCGC+TGG + chr3.3:29438474-29438493 None:intergenic 30.0%
! ATGGTCTTAGAATTAAGACT+TGG - chr3.3:29439512-29439531 MS.gene018971:CDS 30.0%
! CATATTTTGCGACTGATAAA+TGG - chr3.3:29437999-29438018 MS.gene018971:intron 30.0%
! GCATATATTCTATGGATTGA+TGG - chr3.3:29438975-29438994 MS.gene018971:intron 30.0%
! GGTTTTCCACTATGATATTT+TGG + chr3.3:29440162-29440181 None:intergenic 30.0%
! TAGCATTGCTCTTTTCATAT+TGG + chr3.3:29438551-29438570 None:intergenic 30.0%
! TCACCATATATGTTCCTTTT+GGG + chr3.3:29437901-29437920 None:intergenic 30.0%
! TGGTCTTAGAATTAAGACTT+GGG - chr3.3:29439513-29439532 MS.gene018971:CDS 30.0%
! TTACGCCAATTTGATTTAGT+CGG - chr3.3:29439773-29439792 MS.gene018971:intron 30.0%
! TTCACCATATATGTTCCTTT+TGG + chr3.3:29437902-29437921 None:intergenic 30.0%
! TTTTTCCTTCTTTATTGTGC+TGG - chr3.3:29439861-29439880 MS.gene018971:intron 30.0%
!! CATCTTTTGAAAGCTTAATC+TGG + chr3.3:29441025-29441044 None:intergenic 30.0%
!! CCACTCAGATTTTGTTTATT+AGG + chr3.3:29440924-29440943 None:intergenic 30.0%
!! TTCTTTATTGTGCTGGTTAT+TGG - chr3.3:29439868-29439887 MS.gene018971:intron 30.0%
AAAAAGAGAAGGAGTGAAGA+TGG + chr3.3:29437759-29437778 None:intergenic 35.0%
AAAAATCAGAATTTCAGCCC+CGG - chr3.3:29439246-29439265 MS.gene018971:CDS 35.0%
AATTCCTTTGTTAGGATTGG+AGG - chr3.3:29438376-29438395 MS.gene018971:intron 35.0%
ACAAGGTGAAACAAGAAGAA+AGG + chr3.3:29440790-29440809 None:intergenic 35.0%
ACCTTTAGTGACACAACTAA+TGG - chr3.3:29439493-29439512 MS.gene018971:CDS 35.0%
AGGAACACCATTAAGATTGA+AGG + chr3.3:29440770-29440789 None:intergenic 35.0%
AGTGATGCATGCAAATCAAA+TGG - chr3.3:29437857-29437876 MS.gene018971:intron 35.0%
CAAGAATATTGTCCAAATCG+TGG - chr3.3:29439625-29439644 MS.gene018971:intron 35.0%
CACTAATATTCACCTTGTCA+TGG - chr3.3:29440886-29440905 MS.gene018971:intron 35.0%
CCACCTACAGCAAAATTAAT+TGG + chr3.3:29440039-29440058 None:intergenic 35.0%
GAAACAAAAAGAACAACCAC+GGG + chr3.3:29438831-29438850 None:intergenic 35.0%
GATCCCAAAAGGAACATATA+TGG - chr3.3:29437895-29437914 MS.gene018971:intron 35.0%
GGAAACAAAAAGAACAACCA+CGG + chr3.3:29438832-29438851 None:intergenic 35.0%
GTGAAGCAAGTAATCTTCAT+TGG - chr3.3:29437917-29437936 MS.gene018971:intron 35.0%
GTGAATAATTTGATCGTGAG+TGG - chr3.3:29438037-29438056 MS.gene018971:intron 35.0%
GTGTCGTACAAAAATATCAG+AGG - chr3.3:29440082-29440101 MS.gene018971:intron 35.0%
GTTAGGATTGGAGGAATAAT+TGG - chr3.3:29438385-29438404 MS.gene018971:intron 35.0%
TATCCCCGACTAAATCAAAT+TGG + chr3.3:29439781-29439800 None:intergenic 35.0%
TATTCCTCCAATCCTAACAA+AGG + chr3.3:29438383-29438402 None:intergenic 35.0%
TCAACACATGTGGATATTGT+TGG + chr3.3:29440828-29440847 None:intergenic 35.0%
TCGACAACAAACTCTTACAA+AGG + chr3.3:29440739-29440758 None:intergenic 35.0%
TGAACTTACAATTGGAAGAC+GGG + chr3.3:29438134-29438153 None:intergenic 35.0%
! ACCATTAGTTGTGTCACTAA+AGG + chr3.3:29439497-29439516 None:intergenic 35.0%
! TACGCCAATTTGATTTAGTC+GGG - chr3.3:29439774-29439793 MS.gene018971:intron 35.0%
! TAGTGGAAAACCTTGATTTG+TGG - chr3.3:29440170-29440189 MS.gene018971:intron 35.0%
! TATAGGCGTTTTTGAATGCA+TGG - chr3.3:29437834-29437853 MS.gene018971:intron 35.0%
!! AAGCCTTCAAAGTTTTAGTG+AGG + chr3.3:29439546-29439565 None:intergenic 35.0%
!! AGCCTTCAAAGTTTTAGTGA+GGG + chr3.3:29439545-29439564 None:intergenic 35.0%
!! CCAATTAATTTTGCTGTAGG+TGG - chr3.3:29440036-29440055 MS.gene018971:intron 35.0%
!! CTGCCAATTAATTTTGCTGT+AGG - chr3.3:29440033-29440052 MS.gene018971:intron 35.0%
!! TGTGCTGGTTATTGGTTAAA+AGG - chr3.3:29439876-29439895 MS.gene018971:intron 35.0%
!!! GTCACTATTTTGATCCCAAA+AGG - chr3.3:29437884-29437903 MS.gene018971:intron 35.0%
!!! TCCACTATGATATTTTGGCA+TGG + chr3.3:29440157-29440176 None:intergenic 35.0%
AAAATCAGAATTTCAGCCCC+GGG - chr3.3:29439247-29439266 MS.gene018971:CDS 40.0%
AAAGTTGTCCATCCTTTGCA+TGG + chr3.3:29437944-29437963 None:intergenic 40.0%
AAATCGTGGTTGCAGCAATA+AGG - chr3.3:29439639-29439658 MS.gene018971:intron 40.0%
AACAACCACCCTAAAGTGAA+GGG - chr3.3:29438274-29438293 MS.gene018971:intron 40.0%
AATAGAAGAAAACAGTCCCG+TGG - chr3.3:29438812-29438831 MS.gene018971:intron 40.0%
AGAAGGAGTGAAGATGGTTA+TGG + chr3.3:29437753-29437772 None:intergenic 40.0%
ATCTTCATTGGACCATGCAA+AGG - chr3.3:29437929-29437948 MS.gene018971:intron 40.0%
ATTAGTGAAATCGCAACGCA+AGG + chr3.3:29440873-29440892 None:intergenic 40.0%
ATTGGATGGTCAAGGATCTT+CGG - chr3.3:29438069-29438088 MS.gene018971:intron 40.0%
CAAAATTGAAGGGACCTTGA+AGG - chr3.3:29437964-29437983 MS.gene018971:intron 40.0%
CAATAAAATCTCAGTCTGCC+CGG - chr3.3:29438620-29438639 MS.gene018971:intron 40.0%
CATCATTAGGCCACAAATCA+AGG + chr3.3:29440183-29440202 None:intergenic 40.0%
GAACTTACAATTGGAAGACG+GGG + chr3.3:29438133-29438152 None:intergenic 40.0%
GAATTATGACTTCATGGTGG+TGG - chr3.3:29440956-29440975 MS.gene018971:intron 40.0%
GCCATGCCAAAATATCATAG+TGG - chr3.3:29440153-29440172 MS.gene018971:intron 40.0%
GGAAGTCTTGGAAAGTTTGA+TGG - chr3.3:29439433-29439452 MS.gene018971:CDS 40.0%
GTCGCAAAATATGGATCAGT+TGG + chr3.3:29437992-29438011 None:intergenic 40.0%
TAACAACCACCCTAAAGTGA+AGG - chr3.3:29438273-29438292 MS.gene018971:intron 40.0%
TAACACTATAGGCAAGATGG+AGG + chr3.3:29440268-29440287 None:intergenic 40.0%
TCCCCTCACTAAAACTTTGA+AGG - chr3.3:29439540-29439559 MS.gene018971:CDS 40.0%
TCTCTGGCACTAGAAATGTT+TGG - chr3.3:29439368-29439387 MS.gene018971:CDS 40.0%
TTAGTGAAATCGCAACGCAA+GGG + chr3.3:29440872-29440891 None:intergenic 40.0%
TTATTGCTGCAACCACGATT+TGG + chr3.3:29439640-29439659 None:intergenic 40.0%
! ACGCCAATTTGATTTAGTCG+GGG - chr3.3:29439775-29439794 MS.gene018971:intron 40.0%
! ATAATCCCTTCACTTTAGGG+TGG + chr3.3:29438282-29438301 None:intergenic 40.0%
! CATGCTGATGTCTCTTCTTT+TGG - chr3.3:29440232-29440251 MS.gene018971:intron 40.0%
! TGGATTAGAGTTCTCTCCTA+GGG - chr3.3:29440698-29440717 MS.gene018971:CDS 40.0%
!! ATGGATTAGAGTTCTCTCCT+AGG - chr3.3:29440697-29440716 MS.gene018971:CDS 40.0%
!! CTTGATTTGTGGCCTAATGA+TGG - chr3.3:29440181-29440200 MS.gene018971:intron 40.0%
!! GCCTTCAAAGTTTTAGTGAG+GGG + chr3.3:29439544-29439563 None:intergenic 40.0%
!!! TGGATCTCTGACGTTTTTTG+TGG - chr3.3:29439388-29439407 MS.gene018971:CDS 40.0%
AAAAACGCGAACATTGGCAC+CGG - chr3.3:29439325-29439344 MS.gene018971:CDS 45.0%
AATTTGATCGTGAGTGGACC+TGG - chr3.3:29438043-29438062 MS.gene018971:intron 45.0%
ATTGGAAGACGGGGACAATT+AGG + chr3.3:29438124-29438143 None:intergenic 45.0%
ATTTGATCGTGAGTGGACCT+GGG - chr3.3:29438044-29438063 MS.gene018971:intron 45.0%
CAACGCAAGGGAAAAAGCAA+AGG + chr3.3:29440860-29440879 None:intergenic 45.0%
CATCGCGATACAATCATCAC+CGG + chr3.3:29439347-29439366 None:intergenic 45.0%
GAGACGATTGATGAAACCCT+AGG + chr3.3:29440717-29440736 None:intergenic 45.0%
GGCTATAATCAACCACGACA+AGG + chr3.3:29440807-29440826 None:intergenic 45.0%
TCATTGGACCATGCAAAGGA+TGG - chr3.3:29437933-29437952 MS.gene018971:intron 45.0%
TTGGAAGACGGGGACAATTA+GGG + chr3.3:29438123-29438142 None:intergenic 45.0%
! CGGGCAGACTGAGATTTTAT+TGG + chr3.3:29438622-29438641 None:intergenic 45.0%
! CTTCTTGTTTCACCTTGTCG+TGG - chr3.3:29440792-29440811 MS.gene018971:CDS 45.0%
! GGAGTTAGCATTGGAAGTCT+TGG - chr3.3:29439421-29439440 MS.gene018971:CDS 45.0%
!! TGGTGGTGGTGTTTCAGTTA+TGG - chr3.3:29440970-29440989 MS.gene018971:CDS 45.0%
!!! GTTTTTTGTGGTCCTGGACA+TGG - chr3.3:29439400-29439419 MS.gene018971:CDS 45.0%
!!! TCTGACGTTTTTTGTGGTCC+TGG - chr3.3:29439394-29439413 MS.gene018971:CDS 45.0%
AACTACGGTGCAATCGCAGA+TGG - chr3.3:29437700-29437719 MS.gene018971:intron 50.0%
ACAAGGGAGATGGTGATCTC+CGG + chr3.3:29440566-29440585 None:intergenic 50.0%
ATGGTCAAGGATCTTCGGCT+TGG - chr3.3:29438074-29438093 MS.gene018971:intron 50.0%
CCAATGCTAACTCCATGTCC+AGG + chr3.3:29439415-29439434 None:intergenic 50.0%
CCTGGACATGGAGTTAGCAT+TGG - chr3.3:29439412-29439431 MS.gene018971:CDS 50.0%
CGGTGATGATTGTATCGCGA+TGG - chr3.3:29439345-29439364 MS.gene018971:CDS 50.0%
GATCACCATCTCCCTTGTGA+TGG - chr3.3:29440568-29440587 MS.gene018971:CDS 50.0%
GATTGTATCGCGATGGTCTC+TGG - chr3.3:29439352-29439371 MS.gene018971:CDS 50.0%
GGTGATAGCCCAAACACAGA+TGG - chr3.3:29439268-29439287 MS.gene018971:CDS 50.0%
TAGGAACTGCACTCGGAGTA+AGG + chr3.3:29441075-29441094 None:intergenic 50.0%
TCAGTCTGCCCGGAAATCAT+GGG - chr3.3:29438630-29438649 MS.gene018971:intron 50.0%
TCTGTGTTTGGGCTATCACC+CGG + chr3.3:29439268-29439287 None:intergenic 50.0%
TGGATCAGTTGGAGCCTTCA+AGG + chr3.3:29437981-29438000 None:intergenic 50.0%
! TAATGAGGCAGCTAGTCTCG+TGG + chr3.3:29440620-29440639 None:intergenic 50.0%
!! TCAAGGATCTTCGGCTTGGT+CGG - chr3.3:29438078-29438097 MS.gene018971:intron 50.0%
ACCCACCACCCCATGATTTC+CGG + chr3.3:29438642-29438661 None:intergenic 55.0%
AGTGGACCTGGGACATTGGA+TGG - chr3.3:29438055-29438074 MS.gene018971:intron 55.0%
ATCGGCCATCACAAGGGAGA+TGG + chr3.3:29440576-29440595 None:intergenic 55.0%
ATCTCCCTTGTGATGGCCGA+TGG - chr3.3:29440575-29440594 MS.gene018971:CDS 55.0%
CAGTCTGCCCGGAAATCATG+GGG - chr3.3:29438631-29438650 MS.gene018971:intron 55.0%
CCTGGGACATTGGATGGTCA+AGG - chr3.3:29438061-29438080 MS.gene018971:intron 55.0%
CCTTGACCATCCAATGTCCC+AGG + chr3.3:29438064-29438083 None:intergenic 55.0%
CTCAGTCTGCCCGGAAATCA+TGG - chr3.3:29438629-29438648 MS.gene018971:intron 55.0%
CTGTGTTTGGGCTATCACCC+GGG + chr3.3:29439267-29439286 None:intergenic 55.0%
GACTTCGACCAAACCCCCAT+CGG + chr3.3:29440594-29440613 None:intergenic 55.0%
TCTCCCTTGTGATGGCCGAT+GGG - chr3.3:29440576-29440595 MS.gene018971:CDS 55.0%
TGTGTTTGGGCTATCACCCG+GGG + chr3.3:29439266-29439285 None:intergenic 55.0%
AACCCCCATCGGCCATCACA+AGG + chr3.3:29440583-29440602 None:intergenic 60.0%
ACCCCCATCGGCCATCACAA+GGG + chr3.3:29440582-29440601 None:intergenic 60.0%
CCCACCACCCCATGATTTCC+GGG + chr3.3:29438641-29438660 None:intergenic 60.0%
CCCGGAAATCATGGGGTGGT+GGG - chr3.3:29438638-29438657 MS.gene018971:intron 60.0%
CGTGAGTGGACCTGGGACAT+TGG - chr3.3:29438051-29438070 MS.gene018971:intron 60.0%
CTCCCTTGTGATGGCCGATG+GGG - chr3.3:29440577-29440596 MS.gene018971:CDS 60.0%
TCCCTTGTGATGGCCGATGG+GGG - chr3.3:29440578-29440597 MS.gene018971:CDS 60.0%
TCTGCCCGGAAATCATGGGG+TGG - chr3.3:29438634-29438653 MS.gene018971:intron 60.0%
TGTGATGGCCGATGGGGGTT+TGG - chr3.3:29440583-29440602 MS.gene018971:CDS 60.0%
GCCCGGAAATCATGGGGTGG+TGG - chr3.3:29438637-29438656 MS.gene018971:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 29437610 29441100 29437610 ID=MS.gene018971
chr3.3 mRNA 29437610 29441100 29437610 ID=MS.gene018971.t1;Parent=MS.gene018971
chr3.3 exon 29440969 29441100 29440969 ID=MS.gene018971.t1.exon1;Parent=MS.gene018971.t1
chr3.3 CDS 29440969 29441100 29440969 ID=cds.MS.gene018971.t1;Parent=MS.gene018971.t1
chr3.3 exon 29440566 29440871 29440566 ID=MS.gene018971.t1.exon2;Parent=MS.gene018971.t1
chr3.3 CDS 29440566 29440871 29440566 ID=cds.MS.gene018971.t1;Parent=MS.gene018971.t1
chr3.3 exon 29439050 29439571 29439050 ID=MS.gene018971.t1.exon3;Parent=MS.gene018971.t1
chr3.3 CDS 29439050 29439571 29439050 ID=cds.MS.gene018971.t1;Parent=MS.gene018971.t1
chr3.3 exon 29437610 29437684 29437610 ID=MS.gene018971.t1.exon4;Parent=MS.gene018971.t1
chr3.3 CDS 29437610 29437684 29437610 ID=cds.MS.gene018971.t1;Parent=MS.gene018971.t1
Gene Sequence

>MS.gene018971

ATGGTTGGAAATTTTTTGTTTGTGTTTTTCTTACTAGCAGTTTGTATTTCAAAATCACAAGCACGAGTCACAAACGTTTTTAATGTGTTAAACTACGGTGCAATCGCAGATGGAGAAACTGATAATAAAGAGGTATATAACCATAACCATCTTCACTCCTTCTCTTTTTTATTTCTTAAAATTTTGATTTAGATTACCTAACTAATTTGTTATTCTCTTGTAAATATAGGCGTTTTTGAATGCATGGAGTGATGCATGCAAATCAAATGGAAAAGTCACTATTTTGATCCCAAAAGGAACATATATGGTGAAGCAAGTAATCTTCATTGGACCATGCAAAGGATGGACAACTTTCAAAATTGAAGGGACCTTGAAGGCTCCAACTGATCCATATTTTGCGACTGATAAATGGATTAATTTTCAATACGTGAATAATTTGATCGTGAGTGGACCTGGGACATTGGATGGTCAAGGATCTTCGGCTTGGTCGGTAAATGATTGCAAAAACAACCCTAATTGTCCCCGTCTTCCAATTGTAAGTTCATCTATTAAATCATATTCCATAGATATCCTTAAAAAAAATTATATTCTACAGATCGATCAATGGATTTTAACAAAATTACATATGTTTTTAACCAAGAGGAAATAAATTGGAATAGCGGATAACAACCACCCTAAAGTGAAGGGATTATTATTATTTTTTTTTTTTGAAAGATAAAGTGAAGGGATTATGTTACTATTCATTAATAATAGAAAAGTAGTTTTAAATTCCTTTGTTAGGATTGGAGGAATAATTGGGAATTTAGTTTCTATACTATCGTGTCTTATATATGTTTCAATAGTATCATGTTTAAATAGTTTCCAGCGATCACATTTTGTTATAATGTTCTAGTGATAAATTTGTCATAGCTACCATCAAATCAAAATCATGATACATACCAATATGAAAAGAGCAATGCTATTTATCAAGAAAGATTTTATCAAGAAATTGTCCCGAAATTAATGTTAGCCAATAAAATCTCAGTCTGCCCGGAAATCATGGGGTGGTGGGTGTTATATATTTTTTTTTATGAAACTTTAATAAATAAGATTAAAATCTAAGGGTGATTATTGTGTCATGTCATTCTTGAATTCATCAAGAAAATCCATTCTTGATATCTAGCATTTTCCATATGAAAATAAATCGTGAAAAAAAAATCATCAATAGAAGAAAACAGTCCCGTGGTTGTTCTTTTTGTTTCCACATTTTATTTTTTATTTCTATTTATAGCGTGTGTGTGTATATATATAATATATTTTAAGAGTTTTTTTTTTTTTTTGAATAAATATATTTAAGAGTTATTAGTAGTTATTTTTTTAATTGAAGCATATATTCTATGGATTGATGGAACAAATTGTAGCCAAACCAATATGATTTATCTTTTTAACGGGAGTCTACCAATATGTTAAATGTTACATTTTTTTATTATACTAGTTATGAATTTTTGTTTAACATGATATTAATGCATTGGTGTTTTTTGTTTTCTCAGTCCATGACATTTGATTTTGTCACAAATGGTACCATTCACCATTTGAGATCTTTTAATAGCAAAGGAGCACATTTTAAGTTGTTTGCTTGCGAAAACATGATTTTCACAAAAATCAGAATTTCAGCCCCGGGTGATAGCCCAAACACAGATGGAATAAAAATAGGCAAGTCAAACGGGATAACTATTAAAAACGCGAACATTGGCACCGGTGATGATTGTATCGCGATGGTCTCTGGCACTAGAAATGTTTGGATCTCTGACGTTTTTTGTGGTCCTGGACATGGAGTTAGCATTGGAAGTCTTGGAAAGTTTGATGGAGAAGAAGATGTTGACAACATAAATGTGAAGAACTGCACCTTTAGTGACACAACTAATGGTCTTAGAATTAAGACTTGGGCTTCTCCCCTCACTAAAACTTTGAAGGCTTCTCATATTGTGTATGAAGATATTGTGATGAATAACGTGGATAATCCCATTCTTATTGATCAAGAATATTGTCCAAATCGTGGTTGCAGCAATAAGGTTAATACTTTTAACCTACATCCTAATTTAATATTAAATTTAAATCACTTTTTTACTCACTTTTTTTTGTTAATTTGAAATATTTAATATTCATAAAATTTGAGATGAATTTTTACGCCAATTTGATTTAGTCGGGGATATGAGTCGTCAAATTTTCATTCAAACTATGATAAAAACATTACCATAGAGAGTTTGTATTTTTTTTCCTTCTTTATTGTGCTGGTTATTGGTTAAAAGGTAAAATTTTGATTTGAGGTTTACTAATATTTTTAGGATATCTAATTTTGGGAGATATTTTATAAGTATTGATTGAAAATATAGATTAAATACTGATAATTGACATGACCTTACATATGTACCATAATCTAATTTCTGCCAATTAATTTTGCTGTAGGTGGCATCAAACGTGCAAATAAATAGTGTGTCGTACAAAAATATCAGAGGAAGTGTGAATAGTCAACTTGCAATGAACTTGAAATGCAGTGAAAAAGAGCCATGCCAAAATATCATAGTGGAAAACCTTGATTTGTGGCCTAATGATGGTAAAAGAAAACTAAACAACTGGTGTTCACATGCTGATGTCTCTTCTTTTGGAAAACAAAATCCTCCATCTTGCCTATAGTGTTAAATATTTTTCTTAATGCTGATGATGTTCACATACTTTCTGAAACTTAGTTTTTTGCAATCTCATTGATACTTGATAGTCTCTGTTCGAAGACAAGAATATTATTGTTTTTTTTAGAGGAAGGATATTATTGCTATTTTTGTTATTATCATTTTTTTGAAGGATCTTCATGTTTAAAGGATCTTCAATTCTTTATGGTATAATCACTAGGTTATAAATACCAATAAATAAATAAATAAATAATCACTAGGTTATAAGAAATATAATGAAGGTCAGTCCGGAGATCACCATCTCCCTTGTGATGGCCGATGGGGGTTTGGTCGAAGTCTAACCACGAGACTAGCTGCCTCATTAACATTTAAACATATAATTCAAATCAACTCTCAACATTATATAATAAGTTAACAACTAATGGATTAGAGTTCTCTCCTAGGGTTTCATCAATCGTCTCCTTTGTAAGAGTTTGTTGTCGATTAGATTGCCTTCAATCTTAATGGTGTTCCTTTCTTCTTGTTTCACCTTGTCGTGGTTGATTATAGCCAACAATATCCACATGTGTTGAGATTTTAATCCTTTGCTTTTTCCCTTGCGTTGCGATTTCACTAATATTCACCTTGTCATGGTTGATAAAGATTCCTAATAAACAAAATCTGAGTGGTTGGTATTTATTGAATTATGACTTCATGGTGGTGGTGTTTCAGTTATGGTTCTAATTGTTTAGTATTGGCACTGATCTCCAGATTAAGCTTTCAAAAGATGTAGGCCATGAGTACGATAAGATGTTTTCCTTACTCCGAGTGCAGTTCCTAGCTTGA
Protein sequence

>MS.gene018971.t1

MVGNFLFVFFLLAVCISKSQARVTNVFNVLNYGAIADGETDNKEAFLNAWSDACKSNGKVTILIPKGTYMVKQVIFIGPCKGWTTFKIEGTLKAPTDPYFATDKWINFQYVNNLIVSGPGTLDGQGSSAWSVNDCKNNPNCPRLPISMTFDFVTNGTIHHLRSFNSKGAHFKLFACENMIFTKIRISAPGDSPNTDGIKIGKSNGITIKNANIGTGDDCIAMVSGTRNVWISDVFCGPGHGVSIGSLGKFDGEEDVDNINVKNCTFSDTTNGLRIKTWASPLTKTLKASHIVYEDIVMNNVDNPILIDQEYCPNRGCSNKIKLSKDVGHEYDKMFSLLRVQFLA