Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019625.t1 | XP_013444838.1 | 88.4 | 398 | 42 | 2 | 1 | 394 | 1 | 398 | 5.40E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019625.t1 | Q39766 | 44.5 | 389 | 211 | 4 | 6 | 393 | 11 | 395 | 1.2e-94 | 348.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019625.t1 | A0A072TPY4 | 88.4 | 398 | 42 | 2 | 1 | 394 | 1 | 398 | 3.9e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63570 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene89048 | PPI |
| MS.gene019625 | MS.gene03618 | PPI |
| MS.gene019625 | MS.gene46962 | PPI |
| MS.gene019625 | MS.gene86370 | PPI |
| MS.gene038102 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene29308 | PPI |
| MS.gene019625 | MS.gene071826 | PPI |
| MS.gene019625 | MS.gene36228 | PPI |
| MS.gene78336 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene056777 | PPI |
| MS.gene019625 | MS.gene069198 | PPI |
| MS.gene019625 | MS.gene92027 | PPI |
| MS.gene072441 | MS.gene019625 | PPI |
| MS.gene019627 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene069200 | PPI |
| MS.gene019625 | MS.gene018971 | PPI |
| MS.gene071829 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene51014 | PPI |
| MS.gene019143 | MS.gene019625 | PPI |
| MS.gene019625 | MS.gene22233 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019625.t1 | MTR_8g030930 | 88.442 | 398 | 42 | 2 | 1 | 394 | 1 | 398 | 0.0 | 694 |
| MS.gene019625.t1 | MTR_3g438050 | 63.131 | 396 | 143 | 3 | 1 | 394 | 1 | 395 | 0.0 | 516 |
| MS.gene019625.t1 | MTR_5g063430 | 70.418 | 311 | 87 | 1 | 1 | 311 | 1 | 306 | 5.78e-167 | 470 |
| MS.gene019625.t1 | MTR_1g088160 | 42.105 | 380 | 206 | 7 | 24 | 395 | 34 | 407 | 1.34e-99 | 302 |
| MS.gene019625.t1 | MTR_2g058670 | 37.913 | 393 | 232 | 6 | 6 | 390 | 6 | 394 | 8.46e-97 | 295 |
| MS.gene019625.t1 | MTR_2g058840 | 37.531 | 397 | 226 | 6 | 6 | 390 | 6 | 392 | 3.18e-96 | 294 |
| MS.gene019625.t1 | MTR_2g058640 | 37.157 | 401 | 240 | 6 | 7 | 399 | 7 | 403 | 1.35e-92 | 284 |
| MS.gene019625.t1 | MTR_4g083660 | 40.642 | 374 | 210 | 7 | 25 | 394 | 9 | 374 | 7.70e-90 | 276 |
| MS.gene019625.t1 | MTR_2g049400 | 39.286 | 392 | 224 | 8 | 5 | 394 | 12 | 391 | 1.03e-88 | 274 |
| MS.gene019625.t1 | MTR_2g435640 | 37.766 | 376 | 225 | 6 | 23 | 393 | 51 | 422 | 5.89e-87 | 270 |
| MS.gene019625.t1 | MTR_5g097860 | 43.125 | 320 | 176 | 4 | 21 | 337 | 21 | 337 | 5.30e-86 | 265 |
| MS.gene019625.t1 | MTR_1g052315 | 40.657 | 396 | 214 | 11 | 8 | 393 | 46 | 430 | 5.35e-86 | 268 |
| MS.gene019625.t1 | MTR_7g091850 | 40.793 | 353 | 198 | 7 | 18 | 364 | 69 | 416 | 8.72e-85 | 265 |
| MS.gene019625.t1 | MTR_4g120320 | 36.340 | 377 | 229 | 6 | 23 | 393 | 50 | 421 | 4.34e-82 | 258 |
| MS.gene019625.t1 | MTR_7g091840 | 41.250 | 320 | 177 | 6 | 23 | 335 | 63 | 378 | 3.66e-80 | 251 |
| MS.gene019625.t1 | MTR_2g103410 | 36.031 | 383 | 232 | 8 | 24 | 399 | 58 | 434 | 2.84e-79 | 251 |
| MS.gene019625.t1 | MTR_6g028080 | 39.024 | 369 | 198 | 9 | 25 | 377 | 30 | 387 | 3.28e-79 | 249 |
| MS.gene019625.t1 | MTR_2g060350 | 38.624 | 378 | 214 | 10 | 24 | 390 | 73 | 443 | 3.56e-79 | 251 |
| MS.gene019625.t1 | MTR_4g084050 | 40.533 | 375 | 198 | 9 | 4 | 364 | 2 | 365 | 5.21e-79 | 249 |
| MS.gene019625.t1 | MTR_8g009810 | 36.896 | 393 | 236 | 8 | 5 | 393 | 15 | 399 | 1.04e-78 | 248 |
| MS.gene019625.t1 | MTR_8g065030 | 34.204 | 383 | 238 | 8 | 24 | 399 | 64 | 439 | 1.28e-77 | 247 |
| MS.gene019625.t1 | MTR_3g030540 | 40.845 | 355 | 199 | 7 | 15 | 364 | 60 | 408 | 2.44e-76 | 243 |
| MS.gene019625.t1 | MTR_3g084380 | 40.115 | 349 | 189 | 8 | 25 | 364 | 21 | 358 | 1.55e-74 | 237 |
| MS.gene019625.t1 | MTR_3g054320 | 38.070 | 373 | 200 | 9 | 11 | 366 | 7 | 365 | 1.61e-72 | 232 |
| MS.gene019625.t1 | MTR_3g084360 | 37.931 | 377 | 212 | 9 | 6 | 371 | 3 | 368 | 7.63e-72 | 230 |
| MS.gene019625.t1 | MTR_5g043350 | 37.808 | 365 | 204 | 9 | 4 | 354 | 2 | 357 | 2.38e-71 | 229 |
| MS.gene019625.t1 | MTR_4g094715 | 33.933 | 389 | 238 | 8 | 24 | 398 | 64 | 447 | 7.83e-71 | 229 |
| MS.gene019625.t1 | MTR_8g010110 | 35.623 | 393 | 234 | 6 | 7 | 396 | 13 | 389 | 8.57e-71 | 228 |
| MS.gene019625.t1 | MTR_2g029170 | 39.296 | 341 | 195 | 8 | 58 | 394 | 29 | 361 | 1.71e-70 | 226 |
| MS.gene019625.t1 | MTR_8g010080 | 35.356 | 379 | 223 | 7 | 5 | 377 | 7 | 369 | 1.16e-69 | 224 |
| MS.gene019625.t1 | MTR_8g010070 | 35.156 | 384 | 229 | 8 | 5 | 384 | 11 | 378 | 5.48e-69 | 223 |
| MS.gene019625.t1 | MTR_6g005630 | 35.185 | 378 | 223 | 11 | 5 | 370 | 17 | 384 | 1.28e-68 | 223 |
| MS.gene019625.t1 | MTR_1g086390 | 34.987 | 383 | 229 | 9 | 24 | 391 | 80 | 457 | 3.45e-68 | 223 |
| MS.gene019625.t1 | MTR_5g033680 | 34.015 | 391 | 238 | 10 | 21 | 397 | 55 | 439 | 2.01e-67 | 221 |
| MS.gene019625.t1 | MTR_7g110050 | 34.359 | 390 | 234 | 11 | 24 | 397 | 66 | 449 | 1.06e-66 | 219 |
| MS.gene019625.t1 | MTR_0157s0060 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.97e-66 | 215 |
| MS.gene019625.t1 | MTR_4g034020 | 38.873 | 355 | 190 | 11 | 29 | 372 | 2 | 340 | 2.97e-66 | 215 |
| MS.gene019625.t1 | MTR_2g100040 | 35.376 | 359 | 181 | 6 | 7 | 363 | 8 | 317 | 5.30e-66 | 214 |
| MS.gene019625.t1 | MTR_2g103650 | 32.984 | 382 | 243 | 7 | 5 | 377 | 8 | 385 | 5.99e-66 | 215 |
| MS.gene019625.t1 | MTR_8g010090 | 34.734 | 357 | 214 | 6 | 24 | 377 | 30 | 370 | 3.70e-65 | 213 |
| MS.gene019625.t1 | MTR_8g008765 | 35.694 | 353 | 205 | 6 | 5 | 350 | 7 | 344 | 1.48e-64 | 210 |
| MS.gene019625.t1 | MTR_1g012390 | 32.737 | 391 | 250 | 9 | 6 | 391 | 9 | 391 | 8.00e-61 | 202 |
| MS.gene019625.t1 | MTR_8g010040 | 34.551 | 356 | 213 | 7 | 25 | 377 | 32 | 370 | 8.83e-61 | 201 |
| MS.gene019625.t1 | MTR_5g034090 | 33.244 | 373 | 214 | 8 | 24 | 366 | 120 | 487 | 1.04e-60 | 205 |
| MS.gene019625.t1 | MTR_1g013730 | 32.552 | 384 | 232 | 8 | 6 | 384 | 8 | 369 | 4.33e-59 | 197 |
| MS.gene019625.t1 | MTR_1g013740 | 30.982 | 397 | 246 | 8 | 5 | 395 | 15 | 389 | 1.56e-57 | 193 |
| MS.gene019625.t1 | MTR_7g035415 | 33.645 | 321 | 188 | 8 | 5 | 310 | 10 | 320 | 6.42e-57 | 190 |
| MS.gene019625.t1 | MTR_8g010050 | 40.580 | 276 | 153 | 4 | 5 | 276 | 11 | 279 | 1.44e-56 | 189 |
| MS.gene019625.t1 | MTR_2g103410 | 36.727 | 275 | 167 | 4 | 24 | 292 | 58 | 331 | 1.68e-56 | 189 |
| MS.gene019625.t1 | MTR_8g065010 | 31.367 | 373 | 220 | 8 | 25 | 366 | 107 | 474 | 1.82e-55 | 191 |
| MS.gene019625.t1 | MTR_7g113910 | 35.312 | 320 | 167 | 10 | 85 | 399 | 74 | 358 | 7.35e-55 | 186 |
| MS.gene019625.t1 | MTR_2g032710 | 31.282 | 390 | 247 | 8 | 24 | 398 | 66 | 449 | 8.64e-55 | 187 |
| MS.gene019625.t1 | MTR_6g005630 | 33.069 | 378 | 208 | 13 | 5 | 370 | 17 | 361 | 2.02e-54 | 185 |
| MS.gene019625.t1 | MTR_8g077320 | 34.194 | 310 | 160 | 6 | 15 | 310 | 23 | 302 | 5.91e-48 | 167 |
| MS.gene019625.t1 | MTR_5g034090 | 33.559 | 295 | 166 | 5 | 24 | 288 | 120 | 414 | 1.02e-46 | 165 |
| MS.gene019625.t1 | MTR_8g008700 | 34.375 | 288 | 170 | 5 | 84 | 367 | 14 | 286 | 5.42e-44 | 155 |
| MS.gene019625.t1 | MTR_8g031180 | 31.525 | 295 | 166 | 6 | 85 | 372 | 15 | 280 | 1.66e-35 | 132 |
| MS.gene019625.t1 | MTR_7g072360 | 58.182 | 110 | 24 | 1 | 167 | 276 | 41 | 128 | 3.93e-32 | 118 |
| MS.gene019625.t1 | MTR_7g072370 | 75.806 | 62 | 15 | 0 | 221 | 282 | 1 | 62 | 1.70e-24 | 95.9 |
| MS.gene019625.t1 | MTR_7g078680 | 23.116 | 398 | 264 | 10 | 26 | 391 | 56 | 443 | 9.71e-18 | 85.1 |
| MS.gene019625.t1 | MTR_4g124980 | 23.457 | 405 | 266 | 12 | 24 | 395 | 73 | 466 | 2.40e-17 | 84.0 |
| MS.gene019625.t1 | MTR_2g042740 | 23.457 | 405 | 266 | 13 | 24 | 395 | 55 | 448 | 1.66e-16 | 81.3 |
| MS.gene019625.t1 | MTR_8g098840 | 22.864 | 398 | 265 | 11 | 26 | 391 | 45 | 432 | 2.71e-15 | 77.8 |
| MS.gene019625.t1 | MTR_1g100050 | 23.350 | 394 | 252 | 10 | 27 | 384 | 52 | 431 | 1.27e-14 | 75.5 |
| MS.gene019625.t1 | MTR_8g028725 | 22.892 | 415 | 276 | 11 | 7 | 391 | 43 | 443 | 2.56e-14 | 74.7 |
| MS.gene019625.t1 | MTR_1g100060 | 22.449 | 392 | 258 | 11 | 27 | 384 | 95 | 474 | 2.91e-14 | 74.7 |
| MS.gene019625.t1 | MTR_1g100040 | 23.096 | 394 | 253 | 10 | 27 | 384 | 58 | 437 | 4.26e-13 | 70.9 |
| MS.gene019625.t1 | MTR_3g449590 | 23.168 | 423 | 273 | 12 | 15 | 395 | 37 | 449 | 1.00e-12 | 69.7 |
| MS.gene019625.t1 | MTR_1g099850 | 22.500 | 440 | 253 | 12 | 8 | 384 | 22 | 436 | 1.28e-12 | 69.3 |
| MS.gene019625.t1 | MTR_4g120730 | 22.074 | 376 | 241 | 12 | 26 | 364 | 41 | 401 | 1.53e-12 | 69.3 |
| MS.gene019625.t1 | MTR_5g090160 | 22.328 | 421 | 276 | 13 | 11 | 393 | 28 | 435 | 4.37e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019625.t1 | AT1G78400 | 51.344 | 372 | 180 | 1 | 23 | 394 | 33 | 403 | 5.31e-135 | 392 |
| MS.gene019625.t1 | AT2G15450 | 49.618 | 393 | 193 | 4 | 7 | 395 | 13 | 404 | 2.88e-132 | 385 |
| MS.gene019625.t1 | AT1G17150 | 47.558 | 389 | 201 | 2 | 8 | 394 | 14 | 401 | 7.55e-131 | 382 |
| MS.gene019625.t1 | AT1G43080 | 49.492 | 394 | 190 | 6 | 9 | 395 | 13 | 404 | 4.36e-130 | 380 |
| MS.gene019625.t1 | AT1G43090 | 50.130 | 385 | 185 | 5 | 9 | 387 | 13 | 396 | 1.50e-129 | 380 |
| MS.gene019625.t1 | AT2G15470 | 49.109 | 393 | 195 | 4 | 7 | 395 | 13 | 404 | 6.21e-129 | 377 |
| MS.gene019625.t1 | AT2G15460 | 49.227 | 388 | 192 | 4 | 7 | 390 | 13 | 399 | 1.84e-128 | 375 |
| MS.gene019625.t1 | AT2G33160 | 47.643 | 403 | 200 | 5 | 1 | 393 | 1 | 402 | 2.82e-128 | 384 |
| MS.gene019625.t1 | AT4G13760 | 48.354 | 395 | 195 | 5 | 5 | 395 | 15 | 404 | 2.95e-128 | 375 |
| MS.gene019625.t1 | AT1G43100 | 50.259 | 386 | 183 | 6 | 9 | 387 | 13 | 396 | 2.10e-126 | 372 |
| MS.gene019625.t1 | AT2G40310 | 48.111 | 397 | 200 | 5 | 4 | 395 | 9 | 404 | 1.04e-125 | 369 |
| MS.gene019625.t1 | AT2G26620 | 48.187 | 386 | 197 | 3 | 12 | 395 | 18 | 402 | 3.24e-123 | 362 |
| MS.gene019625.t1 | AT3G07820 | 38.422 | 393 | 235 | 3 | 1 | 393 | 1 | 386 | 1.72e-100 | 304 |
| MS.gene019625.t1 | AT5G48140 | 39.695 | 393 | 225 | 4 | 1 | 393 | 6 | 386 | 2.25e-100 | 304 |
| MS.gene019625.t1 | AT3G07840 | 40.464 | 388 | 220 | 5 | 6 | 393 | 11 | 387 | 1.60e-99 | 302 |
| MS.gene019625.t1 | AT4G18180 | 40.260 | 385 | 214 | 6 | 24 | 393 | 38 | 421 | 1.26e-98 | 300 |
| MS.gene019625.t1 | AT2G43890 | 42.091 | 373 | 204 | 8 | 25 | 394 | 29 | 392 | 1.83e-98 | 299 |
| MS.gene019625.t1 | AT1G05650 | 38.677 | 393 | 232 | 6 | 5 | 395 | 8 | 393 | 6.88e-96 | 292 |
| MS.gene019625.t1 | AT3G07830 | 38.168 | 393 | 233 | 3 | 1 | 393 | 5 | 387 | 9.26e-96 | 292 |
| MS.gene019625.t1 | AT1G80170 | 39.687 | 383 | 219 | 7 | 20 | 395 | 48 | 425 | 1.42e-94 | 290 |
| MS.gene019625.t1 | AT1G05660 | 37.817 | 394 | 236 | 6 | 4 | 395 | 7 | 393 | 2.12e-92 | 283 |
| MS.gene019625.t1 | AT3G14040 | 40.420 | 381 | 221 | 4 | 15 | 393 | 61 | 437 | 3.56e-91 | 282 |
| MS.gene019625.t1 | AT3G07850 | 40.701 | 371 | 214 | 4 | 25 | 393 | 70 | 436 | 2.69e-89 | 277 |
| MS.gene019625.t1 | AT2G43880 | 39.084 | 371 | 218 | 5 | 25 | 394 | 31 | 394 | 5.87e-88 | 272 |
| MS.gene019625.t1 | AT2G43870 | 39.846 | 389 | 219 | 10 | 6 | 390 | 4 | 381 | 8.13e-88 | 271 |
| MS.gene019625.t1 | AT3G07970 | 40.053 | 377 | 216 | 7 | 19 | 390 | 65 | 436 | 1.12e-86 | 270 |
| MS.gene019625.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 21 | 388 | 1.35e-86 | 268 |
| MS.gene019625.t1 | AT3G59850 | 40.160 | 376 | 213 | 8 | 23 | 394 | 65 | 432 | 2.32e-86 | 269 |
| MS.gene019625.t1 | AT2G41850 | 39.370 | 381 | 218 | 8 | 15 | 389 | 58 | 431 | 6.79e-85 | 265 |
| MS.gene019625.t1 | AT3G57510 | 40.000 | 375 | 213 | 8 | 8 | 376 | 52 | 420 | 8.30e-85 | 265 |
| MS.gene019625.t1 | AT1G02790 | 36.649 | 382 | 221 | 5 | 1 | 370 | 16 | 388 | 3.75e-83 | 260 |
| MS.gene019625.t1 | AT2G43860 | 40.563 | 355 | 195 | 9 | 25 | 370 | 33 | 380 | 1.85e-79 | 250 |
| MS.gene019625.t1 | AT2G43880 | 41.869 | 289 | 162 | 4 | 25 | 312 | 31 | 314 | 4.37e-75 | 237 |
| MS.gene019625.t1 | AT1G65570 | 36.000 | 400 | 237 | 12 | 5 | 394 | 7 | 397 | 4.87e-75 | 239 |
| MS.gene019625.t1 | AT4G35670 | 37.500 | 368 | 213 | 8 | 23 | 384 | 22 | 378 | 2.49e-74 | 237 |
| MS.gene019625.t1 | AT1G70500 | 33.159 | 383 | 242 | 8 | 24 | 399 | 66 | 441 | 3.83e-74 | 238 |
| MS.gene019625.t1 | AT3G26610 | 35.696 | 381 | 221 | 8 | 24 | 396 | 66 | 430 | 2.93e-72 | 234 |
| MS.gene019625.t1 | AT1G23460 | 32.898 | 383 | 243 | 8 | 24 | 399 | 42 | 417 | 3.98e-72 | 232 |
| MS.gene019625.t1 | AT1G23460 | 32.898 | 383 | 243 | 8 | 24 | 399 | 66 | 441 | 5.99e-72 | 233 |
| MS.gene019625.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 24 | 379 | 2.68e-71 | 231 |
| MS.gene019625.t1 | AT3G15720 | 36.785 | 367 | 214 | 7 | 25 | 384 | 23 | 378 | 3.06e-71 | 231 |
| MS.gene019625.t1 | AT5G17200 | 33.411 | 428 | 232 | 9 | 1 | 388 | 1 | 415 | 1.05e-69 | 226 |
| MS.gene019625.t1 | AT1G02460 | 34.625 | 387 | 228 | 10 | 24 | 391 | 88 | 468 | 1.38e-68 | 225 |
| MS.gene019625.t1 | AT5G27530 | 35.864 | 382 | 216 | 10 | 23 | 396 | 51 | 411 | 2.21e-68 | 223 |
| MS.gene019625.t1 | AT3G15720 | 36.512 | 367 | 212 | 8 | 25 | 384 | 23 | 375 | 3.24e-68 | 223 |
| MS.gene019625.t1 | AT1G80170 | 41.509 | 265 | 148 | 4 | 20 | 278 | 48 | 311 | 3.33e-67 | 216 |
| MS.gene019625.t1 | AT4G32380 | 34.080 | 402 | 242 | 9 | 5 | 393 | 3 | 394 | 4.75e-67 | 219 |
| MS.gene019625.t1 | AT5G14650 | 35.657 | 373 | 225 | 11 | 25 | 391 | 51 | 414 | 1.34e-66 | 218 |
| MS.gene019625.t1 | AT5G44840 | 33.973 | 365 | 223 | 7 | 6 | 364 | 8 | 360 | 6.05e-66 | 215 |
| MS.gene019625.t1 | AT4G01890 | 33.516 | 364 | 215 | 11 | 24 | 367 | 64 | 420 | 3.76e-64 | 213 |
| MS.gene019625.t1 | AT1G80140 | 36.232 | 345 | 200 | 8 | 58 | 393 | 2 | 335 | 1.01e-63 | 207 |
| MS.gene019625.t1 | AT1G10640 | 31.000 | 400 | 238 | 7 | 23 | 392 | 117 | 508 | 2.60e-63 | 212 |
| MS.gene019625.t1 | AT1G60590 | 31.467 | 375 | 219 | 7 | 25 | 366 | 123 | 492 | 6.95e-62 | 208 |
| MS.gene019625.t1 | AT1G56710 | 33.161 | 386 | 238 | 8 | 24 | 394 | 47 | 427 | 8.55e-62 | 205 |
| MS.gene019625.t1 | AT1G48100 | 33.427 | 356 | 219 | 8 | 24 | 366 | 79 | 429 | 1.14e-61 | 206 |
| MS.gene019625.t1 | AT3G15720 | 36.308 | 325 | 190 | 6 | 66 | 384 | 2 | 315 | 4.04e-60 | 200 |
| MS.gene019625.t1 | AT4G32375 | 35.417 | 288 | 176 | 3 | 99 | 385 | 8 | 286 | 2.58e-57 | 193 |
| MS.gene019625.t1 | AT5G39910 | 30.425 | 424 | 208 | 9 | 1 | 396 | 6 | 370 | 6.75e-57 | 191 |
| MS.gene019625.t1 | AT4G32370 | 36.923 | 325 | 173 | 12 | 5 | 310 | 11 | 322 | 1.16e-56 | 189 |
| MS.gene019625.t1 | AT5G44830 | 34.405 | 311 | 180 | 6 | 59 | 364 | 10 | 301 | 3.78e-54 | 182 |
| MS.gene019625.t1 | AT4G35670 | 37.234 | 282 | 164 | 5 | 104 | 384 | 2 | 271 | 5.75e-54 | 181 |
| MS.gene019625.t1 | AT4G32380 | 30.500 | 400 | 218 | 8 | 5 | 393 | 3 | 353 | 1.01e-53 | 184 |
| MS.gene019625.t1 | AT5G14650 | 37.066 | 259 | 154 | 7 | 25 | 278 | 51 | 305 | 2.54e-48 | 167 |
| MS.gene019625.t1 | AT1G19170 | 23.472 | 409 | 262 | 12 | 24 | 395 | 86 | 480 | 2.22e-17 | 84.3 |
| MS.gene019625.t1 | AT4G23820 | 24.297 | 391 | 241 | 11 | 15 | 367 | 31 | 404 | 2.47e-17 | 84.0 |
| MS.gene019625.t1 | AT3G61490 | 22.022 | 445 | 282 | 12 | 6 | 399 | 11 | 441 | 1.63e-15 | 78.6 |
| MS.gene019625.t1 | AT3G61490 | 22.022 | 445 | 282 | 12 | 6 | 399 | 11 | 441 | 1.63e-15 | 78.6 |
| MS.gene019625.t1 | AT3G61490 | 22.022 | 445 | 282 | 12 | 6 | 399 | 11 | 441 | 1.63e-15 | 78.6 |
| MS.gene019625.t1 | AT3G61490 | 22.022 | 445 | 282 | 12 | 6 | 399 | 26 | 456 | 1.68e-15 | 78.6 |
| MS.gene019625.t1 | AT3G48950 | 21.921 | 406 | 261 | 11 | 27 | 393 | 47 | 435 | 3.33e-15 | 77.4 |
| MS.gene019625.t1 | AT3G61490 | 22.022 | 445 | 282 | 12 | 6 | 399 | 124 | 554 | 4.64e-15 | 77.4 |
| MS.gene019625.t1 | AT5G41870 | 23.002 | 413 | 269 | 13 | 15 | 393 | 35 | 432 | 1.35e-13 | 72.4 |
| MS.gene019625.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.86e-13 | 72.0 |
| MS.gene019625.t1 | AT3G62110 | 23.544 | 412 | 252 | 13 | 15 | 384 | 34 | 424 | 1.86e-13 | 72.0 |
| MS.gene019625.t1 | AT2G23900 | 24.150 | 294 | 200 | 8 | 113 | 393 | 163 | 446 | 9.05e-12 | 67.0 |
| MS.gene019625.t1 | AT4G23500 | 22.362 | 398 | 267 | 11 | 26 | 391 | 69 | 456 | 5.09e-11 | 64.7 |
Find 0 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTCTAATATACAAA+AGG | - | 56973:6349-6368 | MS.gene019625:intron | 10.0% |
| !! | ATTATCTCATTATTAACAAA+AGG | - | 56973:7456-7475 | MS.gene019625:intron | 15.0% |
| !! | TTAACAAAAAAAAAACGATA+AGG | - | 56973:6082-6101 | MS.gene019625:CDS | 15.0% |
| !!! | TATCATGATTTTGATTTTAA+TGG | + | 56973:6219-6238 | None:intergenic | 15.0% |
| !! | AAAGTCATTTCGTATTATTT+GGG | - | 56973:6591-6610 | MS.gene019625:intron | 20.0% |
| !! | ATATAAAATGAACTTACAGT+AGG | + | 56973:5828-5847 | None:intergenic | 20.0% |
| !! | CTAATTTCTTAACTAAATAG+TGG | + | 56973:6312-6331 | None:intergenic | 20.0% |
| !! | GAGAGGAAAAAAAATATAAA+TGG | - | 56973:5967-5986 | MS.gene019625:CDS | 20.0% |
| !! | TGAAATAAATCATCAAACAT+TGG | - | 56973:6249-6268 | MS.gene019625:CDS | 20.0% |
| !! | TTATCAGTCTTAAATGAATA+TGG | + | 56973:5684-5703 | None:intergenic | 20.0% |
| !!! | AATGTGTGTTTATTTGTTAA+GGG | - | 56973:7323-7342 | MS.gene019625:CDS | 20.0% |
| !!! | AGTTTGTTATTTTCTTATGA+AGG | - | 56973:5500-5519 | MS.gene019625:CDS | 20.0% |
| !!! | ATATATTTTGTGGATATGTT+TGG | - | 56973:6500-6519 | MS.gene019625:intron | 20.0% |
| !!! | ATTCATTTAAGACTGATAAT+TGG | - | 56973:5685-5704 | MS.gene019625:CDS | 20.0% |
| !!! | GAAATAATCTGCATTTTTTA+TGG | - | 56973:7549-7568 | MS.gene019625:CDS | 20.0% |
| ! | AAACTTATAAAAGACTAAGC+TGG | + | 56973:7094-7113 | None:intergenic | 25.0% |
| ! | AACTTATAAAAGACTAAGCT+GGG | + | 56973:7093-7112 | None:intergenic | 25.0% |
| ! | ATAATCTTGATCAATGACAA+TGG | + | 56973:7002-7021 | None:intergenic | 25.0% |
| ! | CAAAGTCATTTCGTATTATT+TGG | - | 56973:6590-6609 | MS.gene019625:intron | 25.0% |
| ! | TAATCTTGATCAATGACAAT+GGG | + | 56973:7001-7020 | None:intergenic | 25.0% |
| ! | TACAAAAATATTAGAGGAAG+TGG | - | 56973:7191-7210 | MS.gene019625:CDS | 25.0% |
| ! | TATGTTAACAAATTGACTGT+TGG | - | 56973:5720-5739 | MS.gene019625:intron | 25.0% |
| ! | TTAAATGAATATGGATCACT+TGG | + | 56973:5675-5694 | None:intergenic | 25.0% |
| ! | TTAACAAAAGGATTCTACAT+CGG | - | 56973:7468-7487 | MS.gene019625:intron | 25.0% |
| !! | AATACATGTACATACCTTTT+TGG | + | 56973:7044-7063 | None:intergenic | 25.0% |
| !! | AATATTTCAAGTGTGAACAT+TGG | - | 56973:6707-6726 | MS.gene019625:intron | 25.0% |
| !! | ATTACTAAAGCTCATTTTGT+TGG | - | 56973:6049-6068 | MS.gene019625:CDS | 25.0% |
| !! | CAATGTGTGTTTATTTGTTA+AGG | - | 56973:7322-7341 | MS.gene019625:CDS | 25.0% |
| !! | CTTTTCAATGTGAAGAATTA+TGG | - | 56973:5354-5373 | MS.gene019625:intron | 25.0% |
| !! | GTCATGTTTAATTAGTTTCT+AGG | - | 56973:6179-6198 | MS.gene019625:CDS | 25.0% |
| !! | TATAAGTTTGAGTTCTCTAT+AGG | - | 56973:7105-7124 | MS.gene019625:CDS | 25.0% |
| !! | TCTGACAATAATTTTGTGTA+GGG | - | 56973:7137-7156 | MS.gene019625:CDS | 25.0% |
| !! | TTACTAAAGCTCATTTTGTT+GGG | - | 56973:6050-6069 | MS.gene019625:CDS | 25.0% |
| !! | TTCTGACAATAATTTTGTGT+AGG | - | 56973:7136-7155 | MS.gene019625:CDS | 25.0% |
| !!! | ATCGTTTTATTCAAAATGAG+AGG | - | 56973:5950-5969 | MS.gene019625:CDS | 25.0% |
| !!! | TGATTTTGATTTTAATGGTG+AGG | + | 56973:6214-6233 | None:intergenic | 25.0% |
| !!! | TGGATGAACTTTAAAATTGA+AGG | - | 56973:5636-5655 | MS.gene019625:CDS | 25.0% |
| AAAAACGATAAGGTAGAGTA+TGG | - | 56973:6092-6111 | MS.gene019625:CDS | 30.0% | |
| AAAATGCGAATGAATGAACA+TGG | + | 56973:5422-5441 | None:intergenic | 30.0% | |
| AACACAGATGGTATCAAAAT+AGG | - | 56973:6668-6687 | MS.gene019625:intron | 30.0% | |
| AAGTGTACAAATAAGCAATG+TGG | - | 56973:7166-7185 | MS.gene019625:CDS | 30.0% | |
| ACACAGATGGTATCAAAATA+GGG | - | 56973:6669-6688 | MS.gene019625:intron | 30.0% | |
| AGAAGGGACATATATACTTA+AGG | - | 56973:5584-5603 | MS.gene019625:CDS | 30.0% | |
| AGTATGGAAAAAGTAGAGAT+TGG | - | 56973:6108-6127 | MS.gene019625:CDS | 30.0% | |
| CATTGAAAAGCTTGTATTGA+CGG | + | 56973:5344-5363 | None:intergenic | 30.0% | |
| CTTAAGGAAGTTGTATTTAG+TGG | - | 56973:5600-5619 | MS.gene019625:CDS | 30.0% | |
| GAAAATTACCACTCTATTGT+CGG | + | 56973:5400-5419 | None:intergenic | 30.0% | |
| GTCTCAATTGAAGAAAACTT+TGG | - | 56973:6925-6944 | MS.gene019625:intron | 30.0% | |
| GTGGCTTACAAAAATATTAG+AGG | - | 56973:7185-7204 | MS.gene019625:CDS | 30.0% | |
| GTTAAGAATTGTACCTTTAG+TGG | - | 56973:6869-6888 | MS.gene019625:intron | 30.0% | |
| TAAGTATATATGTCCCTTCT+GGG | + | 56973:5584-5603 | None:intergenic | 30.0% | |
| TACTAGGAATGTTCGAATTT+CGG | - | 56973:6763-6782 | MS.gene019625:intron | 30.0% | |
| TATACCCTATGAAATTGATG+TGG | - | 56973:5873-5892 | MS.gene019625:CDS | 30.0% | |
| TGTGTATGAAGATATTGTGA+TGG | - | 56973:6961-6980 | MS.gene019625:intron | 30.0% | |
| TTAAGTATATATGTCCCTTC+TGG | + | 56973:5585-5604 | None:intergenic | 30.0% | |
| ! | ATAGTGGGGTTATTTCATTT+AGG | - | 56973:7384-7403 | MS.gene019625:intron | 30.0% |
| ! | CTGACAATAATTTTGTGTAG+GGG | - | 56973:7138-7157 | MS.gene019625:CDS | 30.0% |
| ! | GAGATAGAGTGTTTGTATTT+CGG | + | 56973:6135-6154 | None:intergenic | 30.0% |
| ! | TGACAATAATTTTGTGTAGG+GGG | - | 56973:7139-7158 | MS.gene019625:CDS | 30.0% |
| !! | ATTTTGATACCATCTGTGTT+GGG | + | 56973:6668-6687 | None:intergenic | 30.0% |
| !!! | TATTTTGATACCATCTGTGT+TGG | + | 56973:6669-6688 | None:intergenic | 30.0% |
| !!! | TGAAGGCATTTTTAAAAGCA+TGG | - | 56973:5517-5536 | MS.gene019625:CDS | 30.0% |
| AATAGAATCTCTTCTCTCTC+TGG | - | 56973:7407-7426 | MS.gene019625:intron | 35.0% | |
| ACATCGGTGTAATCTTAGTA+AGG | - | 56973:7484-7503 | MS.gene019625:CDS | 35.0% | |
| ATCAAAATAGGGAGGTCAAA+TGG | - | 56973:6680-6699 | MS.gene019625:intron | 35.0% | |
| ATCTGCCACATCAATTTCAT+AGG | + | 56973:5881-5900 | None:intergenic | 35.0% | |
| GGTCAAAAGAACAAGCATTA+AGG | + | 56973:6291-6310 | None:intergenic | 35.0% | |
| GTTAACAAATTGACTGTTGG+TGG | - | 56973:5723-5742 | MS.gene019625:intron | 35.0% | |
| TCTGCCACATCAATTTCATA+GGG | + | 56973:5880-5899 | None:intergenic | 35.0% | |
| ! | AAATTTGACTTCATCGCCAA+TGG | - | 56973:6533-6552 | MS.gene019625:intron | 35.0% |
| ! | ATGGTATGAAACCTTTTGAC+AGG | - | 56973:7568-7587 | MS.gene019625:CDS | 35.0% |
| ! | ATGGTGTTAGAATCAAATCG+TGG | - | 56973:6900-6919 | MS.gene019625:intron | 35.0% |
| ! | CTCATTTTGTTGGGAATTGA+GGG | - | 56973:6059-6078 | MS.gene019625:CDS | 35.0% |
| ! | GAGTGGAGGATATTAATTTG+CGG | - | 56973:7273-7292 | MS.gene019625:CDS | 35.0% |
| ! | TATCCTCCACTCTAATGTTT+TGG | + | 56973:7265-7284 | None:intergenic | 35.0% |
| ! | TGGTGTTAGAATCAAATCGT+GGG | - | 56973:6901-6920 | MS.gene019625:intron | 35.0% |
| ! | TGTTGATAGATTCCATGTGA+TGG | + | 56973:6565-6584 | None:intergenic | 35.0% |
| ! | TTTTGATACCATCTGTGTTG+GGG | + | 56973:6667-6686 | None:intergenic | 35.0% |
| !! | TTTGTTAAGGGTGCTAGTTA+TGG | - | 56973:7335-7354 | MS.gene019625:CDS | 35.0% |
| !!! | CGAATTTCGGATGTTTTTTG+TGG | - | 56973:6776-6795 | MS.gene019625:intron | 35.0% |
| AATTATGGTGCACGTTCTGA+TGG | - | 56973:5369-5388 | MS.gene019625:intron | 40.0% | |
| ACAATGTGATTGAGCTCAAG+CGG | - | 56973:6004-6023 | MS.gene019625:CDS | 40.0% | |
| ACCATGCCAAAACATTAGAG+TGG | - | 56973:7256-7275 | MS.gene019625:CDS | 40.0% | |
| ACCCCACTATTTATGCAAGA+AGG | + | 56973:7374-7393 | None:intergenic | 40.0% | |
| ACCTTTAGTGGCACAAGTAA+TGG | - | 56973:6881-6900 | MS.gene019625:intron | 40.0% | |
| ATGCCAAAACATTAGAGTGG+AGG | - | 56973:7259-7278 | MS.gene019625:CDS | 40.0% | |
| CAATGGTTATGTCCATCACA+TGG | - | 56973:6550-6569 | MS.gene019625:intron | 40.0% | |
| CAGATGGTATCAAAATAGGG+AGG | - | 56973:6672-6691 | MS.gene019625:intron | 40.0% | |
| CATAGCAATGCAATCATCAC+CGG | + | 56973:6735-6754 | None:intergenic | 40.0% | |
| CCACTATTTATGCAAGAAGG+GGG | + | 56973:7371-7390 | None:intergenic | 40.0% | |
| CCCACTATTTATGCAAGAAG+GGG | + | 56973:7372-7391 | None:intergenic | 40.0% | |
| CCCCACTATTTATGCAAGAA+GGG | + | 56973:7373-7392 | None:intergenic | 40.0% | |
| CCCCTTCTTGCATAAATAGT+GGG | - | 56973:7369-7388 | MS.gene019625:intron | 40.0% | |
| CCCTTCTTGCATAAATAGTG+GGG | - | 56973:7370-7389 | MS.gene019625:intron | 40.0% | |
| GGAAGTCTTGGTAAGAATGA+AGG | - | 56973:6821-6840 | MS.gene019625:intron | 40.0% | |
| TCAAGTGTGAACATTGGAAC+CGG | - | 56973:6713-6732 | MS.gene019625:intron | 40.0% | |
| TGATTGCATTGCTATGCTCT+CGG | - | 56973:6739-6758 | MS.gene019625:intron | 40.0% | |
| ! | AACAAATTGACTGTTGGTGG+AGG | - | 56973:5726-5745 | MS.gene019625:intron | 40.0% |
| ! | AAGTTCATCCAAGCATTGCA+TGG | + | 56973:5627-5646 | None:intergenic | 40.0% |
| ! | ACCATTACTTGTGCCACTAA+AGG | + | 56973:6885-6904 | None:intergenic | 40.0% |
| ! | AGTCTTTTACTACGACCAGA+AGG | + | 56973:7299-7318 | None:intergenic | 40.0% |
| ! | CAACTGTTTTCATCCCAGAA+GGG | - | 56973:5568-5587 | MS.gene019625:CDS | 40.0% |
| ! | GCTCATTTTGTTGGGAATTG+AGG | - | 56973:6058-6077 | MS.gene019625:CDS | 40.0% |
| !! | CATGTGATGGACATAACCAT+TGG | + | 56973:6552-6571 | None:intergenic | 40.0% |
| !! | GATATTAATTTGCGGCCTTC+TGG | - | 56973:7281-7300 | MS.gene019625:CDS | 40.0% |
| !! | GTACATACCTTTTTGGTGCA+CGG | + | 56973:7037-7056 | None:intergenic | 40.0% |
| !!! | TCCACTCTAATGTTTTGGCA+TGG | + | 56973:7260-7279 | None:intergenic | 40.0% |
| AATGATAGCCCCAACACAGA+TGG | - | 56973:6656-6675 | MS.gene019625:intron | 45.0% | |
| AGTGATGCATGCAGATGGAA+TGG | - | 56973:5540-5559 | MS.gene019625:CDS | 45.0% | |
| ATCTGTGTTGGGGCTATCAT+TGG | + | 56973:6657-6676 | None:intergenic | 45.0% | |
| ATGGTCAAGGATCTTCTGCT+TGG | - | 56973:5760-5779 | MS.gene019625:intron | 45.0% | |
| CCCCCTTCTTGCATAAATAG+TGG | - | 56973:7368-7387 | MS.gene019625:intron | 45.0% | |
| CCTGGTCATGGAATTAGTGT+CGG | - | 56973:6800-6819 | MS.gene019625:intron | 45.0% | |
| GATTGCATTGCTATGCTCTC+GGG | - | 56973:6740-6759 | MS.gene019625:intron | 45.0% | |
| TCTGTGTTGGGGCTATCATT+GGG | + | 56973:6656-6675 | None:intergenic | 45.0% | |
| TGGCAATACCGACAATAGAG+TGG | - | 56973:5389-5408 | MS.gene019625:intron | 45.0% | |
| TTAGTGGTCCATGCAATGCT+TGG | - | 56973:5616-5635 | MS.gene019625:CDS | 45.0% | |
| ! | AAATTGACTGTTGGTGGAGG+TGG | - | 56973:5729-5748 | MS.gene019625:intron | 45.0% |
| ! | GCAACTGTTTTCATCCCAGA+AGG | - | 56973:5567-5586 | MS.gene019625:CDS | 45.0% |
| ! | GGAATTAGTGTCGGAAGTCT+TGG | - | 56973:6809-6828 | MS.gene019625:intron | 45.0% |
| ! | TGCAAGAAGGGGGATTTTGT+TGG | + | 56973:7361-7380 | None:intergenic | 45.0% |
| !!! | GTTTTTTGTGGTCCTGGTCA+TGG | - | 56973:6788-6807 | MS.gene019625:intron | 45.0% |
| !!! | TCGGATGTTTTTTGTGGTCC+TGG | - | 56973:6782-6801 | MS.gene019625:intron | 45.0% |
| !!! | ATGTATTTTTTTTTAAATAA+TGG | + | 56973:6416-6435 | None:intergenic | 5.0% |
| !!! | ATTTTGTTATTAAAAATTAA+GGG | + | 56973:5925-5944 | None:intergenic | 5.0% |
| !!! | TATTTTGTTATTAAAAATTA+AGG | + | 56973:5926-5945 | None:intergenic | 5.0% |
| !!! | TTAAAATTTTATATATTTTG+TGG | - | 56973:6490-6509 | MS.gene019625:intron | 5.0% |
| CATGGAGTGATGCATGCAGA+TGG | - | 56973:5535-5554 | MS.gene019625:CDS | 50.0% | |
| CCGACACTAATTCCATGACC+AGG | + | 56973:6803-6822 | None:intergenic | 50.0% | |
| CTGTGTTGGGGCTATCATTG+GGG | + | 56973:6655-6674 | None:intergenic | 50.0% | |
| TGTGTTGGGGCTATCATTGG+GGG | + | 56973:6654-6673 | None:intergenic | 50.0% | |
| TTGCTATGCTCTCGGGTACT+AGG | - | 56973:6747-6766 | MS.gene019625:intron | 50.0% | |
| !! | CATACCTTTTTGGTGCACGG+AGG | + | 56973:7034-7053 | None:intergenic | 50.0% |
| ACGTCCTCCGTGCACCAAAA+AGG | - | 56973:7027-7046 | MS.gene019625:intron | 55.0% | |
| GGTGGCAGATTGGATGGTCA+AGG | - | 56973:5747-5766 | MS.gene019625:intron | 55.0% | |
| ! | TGTTGGTGGAGGTGGCAGAT+TGG | - | 56973:5737-5756 | MS.gene019625:intron | 55.0% |
| !! | TTTTTGGTGCACGGAGGACG+TGG | + | 56973:7028-7047 | None:intergenic | 55.0% |
| GGTGGAGGTGGCAGATTGGA+TGG | - | 56973:5741-5760 | MS.gene019625:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56973 | gene | 5285 | 7598 | 5285 | ID=MS.gene019625 |
| 56973 | mRNA | 5285 | 7598 | 5285 | ID=MS.gene019625.t1;Parent=MS.gene019625 |
| 56973 | exon | 7473 | 7598 | 7473 | ID=MS.gene019625.t1.exon1;Parent=MS.gene019625.t1 |
| 56973 | CDS | 7473 | 7598 | 7473 | ID=cds.MS.gene019625.t1;Parent=MS.gene019625.t1 |
| 56973 | exon | 7053 | 7361 | 7053 | ID=MS.gene019625.t1.exon2;Parent=MS.gene019625.t1 |
| 56973 | CDS | 7053 | 7361 | 7053 | ID=cds.MS.gene019625.t1;Parent=MS.gene019625.t1 |
| 56973 | exon | 5835 | 6356 | 5835 | ID=MS.gene019625.t1.exon3;Parent=MS.gene019625.t1 |
| 56973 | CDS | 5835 | 6356 | 5835 | ID=cds.MS.gene019625.t1;Parent=MS.gene019625.t1 |
| 56973 | exon | 5492 | 5725 | 5492 | ID=MS.gene019625.t1.exon4;Parent=MS.gene019625.t1 |
| 56973 | CDS | 5492 | 5725 | 5492 | ID=cds.MS.gene019625.t1;Parent=MS.gene019625.t1 |
| 56973 | exon | 5285 | 5293 | 5285 | ID=MS.gene019625.t1.exon5;Parent=MS.gene019625.t1 |
| 56973 | CDS | 5285 | 5293 | 5285 | ID=cds.MS.gene019625.t1;Parent=MS.gene019625.t1 |
| Gene Sequence |
| Protein sequence |
