Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069198.t1 | XP_013444838.1 | 88.9 | 279 | 29 | 1 | 3 | 279 | 45 | 323 | 7.50E-143 | 516.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069198.t1 | Q6H9K0 | 45.2 | 279 | 150 | 2 | 2 | 279 | 25 | 301 | 1.2e-75 | 284.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069198.t1 | A0A072TPY4 | 88.9 | 279 | 29 | 1 | 3 | 279 | 45 | 323 | 5.4e-143 | 516.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92027 | MS.gene069198 | PPI |
| MS.gene069198 | MS.gene89048 | PPI |
| MS.gene78336 | MS.gene069198 | PPI |
| MS.gene86370 | MS.gene069198 | PPI |
| MS.gene46962 | MS.gene069198 | PPI |
| MS.gene038102 | MS.gene069198 | PPI |
| MS.gene071829 | MS.gene069198 | PPI |
| MS.gene069198 | MS.gene03618 | PPI |
| MS.gene071826 | MS.gene069198 | PPI |
| MS.gene072441 | MS.gene069198 | PPI |
| MS.gene019627 | MS.gene069198 | PPI |
| MS.gene019625 | MS.gene069198 | PPI |
| MS.gene018971 | MS.gene069198 | PPI |
| MS.gene22233 | MS.gene069198 | PPI |
| MS.gene51014 | MS.gene069198 | PPI |
| MS.gene069198 | MS.gene36228 | PPI |
| MS.gene069198 | MS.gene056777 | PPI |
| MS.gene019143 | MS.gene069198 | PPI |
| MS.gene069198 | MS.gene069200 | PPI |
| MS.gene069198 | MS.gene51014 | PPI |
| MS.gene29308 | MS.gene069198 | PPI |
| MS.gene63570 | MS.gene069198 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069198.t1 | MTR_8g030930 | 88.889 | 279 | 29 | 1 | 3 | 279 | 45 | 323 | 1.04e-174 | 488 |
| MS.gene069198.t1 | MTR_5g063430 | 71.852 | 270 | 71 | 1 | 2 | 271 | 42 | 306 | 2.44e-149 | 421 |
| MS.gene069198.t1 | MTR_3g438050 | 67.626 | 278 | 89 | 1 | 2 | 279 | 44 | 320 | 8.88e-141 | 402 |
| MS.gene069198.t1 | MTR_2g058670 | 43.816 | 283 | 151 | 4 | 3 | 279 | 41 | 321 | 2.26e-82 | 254 |
| MS.gene069198.t1 | MTR_2g058840 | 43.571 | 280 | 154 | 3 | 3 | 279 | 41 | 319 | 1.02e-81 | 252 |
| MS.gene069198.t1 | MTR_1g088160 | 46.269 | 268 | 138 | 4 | 7 | 270 | 57 | 322 | 1.21e-79 | 246 |
| MS.gene069198.t1 | MTR_2g058640 | 43.463 | 283 | 152 | 4 | 3 | 279 | 41 | 321 | 1.79e-79 | 246 |
| MS.gene069198.t1 | MTR_5g097860 | 43.571 | 280 | 154 | 3 | 3 | 279 | 41 | 319 | 5.24e-77 | 238 |
| MS.gene069198.t1 | MTR_7g091840 | 39.649 | 285 | 162 | 5 | 2 | 280 | 82 | 362 | 1.11e-68 | 218 |
| MS.gene069198.t1 | MTR_2g049400 | 40.780 | 282 | 159 | 5 | 2 | 281 | 45 | 320 | 7.64e-68 | 216 |
| MS.gene069198.t1 | MTR_4g083660 | 42.545 | 275 | 148 | 6 | 2 | 272 | 26 | 294 | 1.03e-66 | 212 |
| MS.gene069198.t1 | MTR_4g120320 | 37.324 | 284 | 170 | 4 | 2 | 279 | 69 | 350 | 2.05e-66 | 213 |
| MS.gene069198.t1 | MTR_2g435640 | 38.163 | 283 | 168 | 4 | 2 | 279 | 70 | 350 | 1.15e-65 | 211 |
| MS.gene069198.t1 | MTR_6g028080 | 40.925 | 281 | 150 | 7 | 2 | 272 | 47 | 321 | 7.28e-65 | 208 |
| MS.gene069198.t1 | MTR_1g052315 | 40.351 | 285 | 159 | 7 | 2 | 280 | 81 | 360 | 2.69e-64 | 208 |
| MS.gene069198.t1 | MTR_7g091850 | 40.364 | 275 | 154 | 6 | 2 | 271 | 93 | 362 | 9.32e-64 | 207 |
| MS.gene069198.t1 | MTR_5g043350 | 40.502 | 279 | 151 | 7 | 3 | 273 | 47 | 318 | 4.59e-62 | 201 |
| MS.gene069198.t1 | MTR_2g103410 | 37.895 | 285 | 166 | 6 | 2 | 279 | 76 | 356 | 3.45e-61 | 200 |
| MS.gene069198.t1 | MTR_2g060350 | 39.510 | 286 | 160 | 7 | 2 | 279 | 90 | 370 | 9.27e-61 | 199 |
| MS.gene069198.t1 | MTR_2g100040 | 39.259 | 270 | 134 | 3 | 2 | 269 | 40 | 281 | 4.34e-60 | 195 |
| MS.gene069198.t1 | MTR_3g084380 | 40.502 | 279 | 152 | 7 | 3 | 272 | 39 | 312 | 1.21e-59 | 194 |
| MS.gene069198.t1 | MTR_4g084050 | 40.000 | 285 | 153 | 6 | 3 | 279 | 41 | 315 | 3.02e-59 | 194 |
| MS.gene069198.t1 | MTR_8g009810 | 40.876 | 274 | 152 | 7 | 3 | 272 | 53 | 320 | 8.99e-59 | 192 |
| MS.gene069198.t1 | MTR_8g010080 | 39.483 | 271 | 152 | 3 | 2 | 270 | 48 | 308 | 1.31e-58 | 192 |
| MS.gene069198.t1 | MTR_8g010110 | 37.906 | 277 | 159 | 4 | 1 | 274 | 47 | 313 | 9.41e-58 | 189 |
| MS.gene069198.t1 | MTR_3g030540 | 41.971 | 274 | 150 | 5 | 2 | 271 | 87 | 355 | 1.06e-57 | 191 |
| MS.gene069198.t1 | MTR_8g065030 | 36.201 | 279 | 167 | 6 | 2 | 274 | 82 | 355 | 1.34e-57 | 191 |
| MS.gene069198.t1 | MTR_3g054320 | 40.647 | 278 | 149 | 7 | 3 | 272 | 48 | 317 | 3.83e-57 | 188 |
| MS.gene069198.t1 | MTR_3g084360 | 39.130 | 276 | 151 | 6 | 3 | 270 | 42 | 308 | 9.58e-56 | 184 |
| MS.gene069198.t1 | MTR_8g008765 | 38.235 | 272 | 154 | 4 | 2 | 270 | 48 | 308 | 2.04e-55 | 182 |
| MS.gene069198.t1 | MTR_8g010070 | 38.603 | 272 | 153 | 5 | 3 | 270 | 49 | 310 | 1.53e-54 | 181 |
| MS.gene069198.t1 | MTR_0157s0060 | 40.727 | 275 | 143 | 8 | 2 | 270 | 15 | 275 | 1.78e-54 | 180 |
| MS.gene069198.t1 | MTR_4g034020 | 40.727 | 275 | 143 | 8 | 2 | 270 | 15 | 275 | 1.78e-54 | 180 |
| MS.gene069198.t1 | MTR_6g005630 | 36.201 | 279 | 166 | 7 | 2 | 276 | 62 | 332 | 5.43e-54 | 181 |
| MS.gene069198.t1 | MTR_4g094715 | 34.948 | 289 | 172 | 5 | 3 | 279 | 83 | 367 | 7.16e-54 | 181 |
| MS.gene069198.t1 | MTR_2g103410 | 37.354 | 257 | 154 | 4 | 2 | 252 | 76 | 331 | 1.06e-53 | 177 |
| MS.gene069198.t1 | MTR_8g010090 | 35.018 | 277 | 167 | 4 | 1 | 274 | 47 | 313 | 7.39e-53 | 177 |
| MS.gene069198.t1 | MTR_1g086390 | 35.616 | 292 | 170 | 7 | 2 | 279 | 98 | 385 | 9.48e-53 | 179 |
| MS.gene069198.t1 | MTR_2g103650 | 36.331 | 278 | 164 | 7 | 3 | 271 | 46 | 319 | 2.78e-52 | 176 |
| MS.gene069198.t1 | MTR_5g033680 | 34.386 | 285 | 173 | 6 | 2 | 276 | 76 | 356 | 4.41e-52 | 177 |
| MS.gene069198.t1 | MTR_7g035415 | 35.165 | 273 | 162 | 6 | 3 | 270 | 58 | 320 | 1.96e-51 | 172 |
| MS.gene069198.t1 | MTR_2g029170 | 39.768 | 259 | 146 | 7 | 18 | 272 | 29 | 281 | 2.69e-51 | 172 |
| MS.gene069198.t1 | MTR_7g110050 | 34.247 | 292 | 173 | 8 | 2 | 279 | 84 | 370 | 4.35e-50 | 171 |
| MS.gene069198.t1 | MTR_8g010050 | 41.004 | 239 | 130 | 4 | 2 | 236 | 48 | 279 | 1.33e-48 | 165 |
| MS.gene069198.t1 | MTR_8g010040 | 36.531 | 271 | 159 | 5 | 3 | 270 | 50 | 310 | 6.12e-48 | 164 |
| MS.gene069198.t1 | MTR_1g012390 | 33.942 | 274 | 173 | 6 | 2 | 270 | 45 | 315 | 2.37e-46 | 160 |
| MS.gene069198.t1 | MTR_1g013730 | 34.173 | 278 | 161 | 6 | 2 | 274 | 44 | 304 | 6.85e-46 | 159 |
| MS.gene069198.t1 | MTR_5g034090 | 33.007 | 306 | 172 | 6 | 2 | 277 | 138 | 440 | 1.11e-45 | 161 |
| MS.gene069198.t1 | MTR_1g013740 | 33.094 | 278 | 164 | 5 | 2 | 274 | 52 | 312 | 9.32e-45 | 155 |
| MS.gene069198.t1 | MTR_8g065010 | 31.699 | 306 | 175 | 6 | 2 | 276 | 124 | 426 | 1.82e-42 | 152 |
| MS.gene069198.t1 | MTR_2g032710 | 32.609 | 276 | 167 | 6 | 18 | 279 | 99 | 369 | 3.69e-42 | 150 |
| MS.gene069198.t1 | MTR_8g077320 | 33.216 | 283 | 145 | 6 | 2 | 270 | 50 | 302 | 4.24e-42 | 148 |
| MS.gene069198.t1 | MTR_7g113910 | 36.975 | 238 | 114 | 7 | 45 | 279 | 74 | 278 | 1.06e-41 | 147 |
| MS.gene069198.t1 | MTR_8g008700 | 37.555 | 229 | 130 | 3 | 44 | 270 | 14 | 231 | 2.09e-41 | 144 |
| MS.gene069198.t1 | MTR_6g005630 | 33.333 | 279 | 151 | 9 | 2 | 276 | 62 | 309 | 7.65e-40 | 143 |
| MS.gene069198.t1 | MTR_5g034090 | 32.130 | 277 | 158 | 5 | 2 | 248 | 138 | 414 | 8.87e-40 | 143 |
| MS.gene069198.t1 | MTR_7g072360 | 58.182 | 110 | 24 | 1 | 127 | 236 | 41 | 128 | 4.32e-33 | 118 |
| MS.gene069198.t1 | MTR_8g031180 | 39.456 | 147 | 86 | 1 | 124 | 270 | 73 | 216 | 1.75e-30 | 115 |
| MS.gene069198.t1 | MTR_7g072370 | 75.806 | 62 | 15 | 0 | 181 | 242 | 1 | 62 | 4.22e-25 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069198.t1 | AT1G78400 | 54.545 | 275 | 124 | 1 | 3 | 277 | 53 | 326 | 3.07e-105 | 312 |
| MS.gene069198.t1 | AT1G43090 | 52.857 | 280 | 130 | 2 | 3 | 281 | 49 | 327 | 1.75e-103 | 309 |
| MS.gene069198.t1 | AT1G43080 | 52.143 | 280 | 132 | 2 | 3 | 281 | 49 | 327 | 2.93e-103 | 307 |
| MS.gene069198.t1 | AT2G15450 | 53.214 | 280 | 129 | 2 | 3 | 281 | 49 | 327 | 9.18e-103 | 305 |
| MS.gene069198.t1 | AT2G15460 | 52.857 | 280 | 130 | 2 | 3 | 281 | 49 | 327 | 1.89e-102 | 305 |
| MS.gene069198.t1 | AT4G13760 | 51.071 | 280 | 135 | 2 | 3 | 281 | 49 | 327 | 4.31e-101 | 301 |
| MS.gene069198.t1 | AT2G15470 | 52.857 | 280 | 130 | 2 | 3 | 281 | 49 | 327 | 4.75e-101 | 301 |
| MS.gene069198.t1 | AT2G40310 | 51.786 | 280 | 133 | 2 | 3 | 281 | 49 | 327 | 6.58e-101 | 301 |
| MS.gene069198.t1 | AT1G43100 | 52.143 | 280 | 132 | 2 | 3 | 281 | 49 | 327 | 6.78e-101 | 302 |
| MS.gene069198.t1 | AT2G33160 | 53.091 | 275 | 127 | 2 | 3 | 276 | 50 | 323 | 3.50e-100 | 307 |
| MS.gene069198.t1 | AT1G17150 | 51.273 | 275 | 133 | 1 | 3 | 277 | 51 | 324 | 7.29e-100 | 298 |
| MS.gene069198.t1 | AT2G26620 | 52.500 | 280 | 131 | 2 | 3 | 281 | 49 | 327 | 4.24e-98 | 293 |
| MS.gene069198.t1 | AT5G48140 | 43.165 | 278 | 155 | 2 | 3 | 280 | 39 | 313 | 1.46e-82 | 254 |
| MS.gene069198.t1 | AT3G07840 | 42.652 | 279 | 158 | 2 | 2 | 280 | 38 | 314 | 2.35e-82 | 253 |
| MS.gene069198.t1 | AT3G07820 | 43.011 | 279 | 157 | 2 | 2 | 280 | 37 | 313 | 6.39e-82 | 252 |
| MS.gene069198.t1 | AT4G18180 | 44.086 | 279 | 151 | 4 | 2 | 276 | 56 | 333 | 2.11e-80 | 249 |
| MS.gene069198.t1 | AT3G07830 | 41.429 | 280 | 162 | 2 | 2 | 281 | 38 | 315 | 4.25e-78 | 242 |
| MS.gene069198.t1 | AT2G43890 | 42.491 | 273 | 149 | 5 | 2 | 272 | 46 | 312 | 4.26e-74 | 232 |
| MS.gene069198.t1 | AT1G05650 | 41.544 | 272 | 151 | 5 | 3 | 272 | 46 | 311 | 1.73e-73 | 230 |
| MS.gene069198.t1 | AT3G07850 | 42.529 | 261 | 146 | 3 | 18 | 276 | 101 | 359 | 1.52e-72 | 229 |
| MS.gene069198.t1 | AT3G14040 | 42.529 | 261 | 146 | 3 | 18 | 276 | 102 | 360 | 2.87e-72 | 229 |
| MS.gene069198.t1 | AT1G80170 | 41.404 | 285 | 156 | 6 | 2 | 279 | 70 | 350 | 3.82e-70 | 223 |
| MS.gene069198.t1 | AT2G43880 | 41.176 | 272 | 154 | 4 | 2 | 272 | 48 | 314 | 9.20e-70 | 219 |
| MS.gene069198.t1 | AT1G05660 | 39.706 | 272 | 156 | 5 | 3 | 272 | 46 | 311 | 2.46e-69 | 219 |
| MS.gene069198.t1 | AT2G43880 | 41.176 | 272 | 154 | 4 | 2 | 272 | 48 | 314 | 3.51e-69 | 219 |
| MS.gene069198.t1 | AT2G43870 | 41.844 | 282 | 154 | 7 | 2 | 279 | 38 | 313 | 1.27e-67 | 215 |
| MS.gene069198.t1 | AT1G02790 | 39.194 | 273 | 162 | 2 | 1 | 273 | 68 | 336 | 2.24e-67 | 215 |
| MS.gene069198.t1 | AT3G07970 | 42.599 | 277 | 150 | 6 | 2 | 273 | 87 | 359 | 3.09e-67 | 216 |
| MS.gene069198.t1 | AT2G41850 | 40.909 | 286 | 159 | 6 | 2 | 281 | 85 | 366 | 4.08e-67 | 215 |
| MS.gene069198.t1 | AT3G57510 | 40.351 | 285 | 160 | 6 | 2 | 280 | 85 | 365 | 5.84e-66 | 212 |
| MS.gene069198.t1 | AT3G59850 | 42.182 | 275 | 149 | 7 | 2 | 272 | 40 | 308 | 1.84e-64 | 207 |
| MS.gene069198.t1 | AT3G59850 | 42.182 | 275 | 149 | 7 | 2 | 272 | 84 | 352 | 4.34e-64 | 207 |
| MS.gene069198.t1 | AT1G80170 | 41.975 | 243 | 134 | 4 | 2 | 238 | 70 | 311 | 7.08e-62 | 198 |
| MS.gene069198.t1 | AT5G17200 | 41.176 | 272 | 146 | 5 | 2 | 270 | 56 | 316 | 2.36e-61 | 200 |
| MS.gene069198.t1 | AT2G43860 | 40.000 | 285 | 160 | 7 | 2 | 281 | 50 | 328 | 3.44e-61 | 199 |
| MS.gene069198.t1 | AT4G35670 | 38.246 | 285 | 162 | 6 | 2 | 280 | 41 | 317 | 1.12e-59 | 195 |
| MS.gene069198.t1 | AT1G65570 | 40.072 | 277 | 153 | 9 | 2 | 272 | 48 | 317 | 1.37e-58 | 192 |
| MS.gene069198.t1 | AT4G32370 | 39.789 | 284 | 143 | 10 | 2 | 270 | 52 | 322 | 2.87e-57 | 187 |
| MS.gene069198.t1 | AT3G15720 | 39.338 | 272 | 151 | 5 | 2 | 270 | 41 | 301 | 3.01e-57 | 190 |
| MS.gene069198.t1 | AT3G15720 | 39.338 | 272 | 151 | 5 | 2 | 270 | 40 | 300 | 3.14e-57 | 190 |
| MS.gene069198.t1 | AT5G44840 | 36.331 | 278 | 163 | 5 | 2 | 273 | 41 | 310 | 3.92e-56 | 186 |
| MS.gene069198.t1 | AT5G27530 | 39.273 | 275 | 141 | 8 | 3 | 270 | 71 | 326 | 6.89e-56 | 186 |
| MS.gene069198.t1 | AT1G70500 | 32.982 | 285 | 180 | 6 | 2 | 280 | 84 | 363 | 1.34e-55 | 186 |
| MS.gene069198.t1 | AT3G26610 | 35.689 | 283 | 170 | 5 | 2 | 276 | 84 | 362 | 4.08e-55 | 185 |
| MS.gene069198.t1 | AT4G32380 | 37.455 | 275 | 157 | 5 | 2 | 270 | 44 | 309 | 3.82e-54 | 182 |
| MS.gene069198.t1 | AT3G15720 | 38.971 | 272 | 149 | 6 | 2 | 270 | 40 | 297 | 3.90e-54 | 182 |
| MS.gene069198.t1 | AT1G23460 | 33.333 | 279 | 175 | 6 | 2 | 274 | 60 | 333 | 2.79e-53 | 179 |
| MS.gene069198.t1 | AT1G23460 | 33.333 | 279 | 175 | 6 | 2 | 274 | 84 | 357 | 3.23e-53 | 179 |
| MS.gene069198.t1 | AT1G02460 | 34.797 | 296 | 170 | 8 | 2 | 279 | 106 | 396 | 3.42e-51 | 175 |
| MS.gene069198.t1 | AT3G15720 | 39.271 | 247 | 137 | 4 | 26 | 270 | 2 | 237 | 4.30e-51 | 172 |
| MS.gene069198.t1 | AT4G01890 | 33.446 | 296 | 172 | 9 | 3 | 279 | 83 | 372 | 7.03e-50 | 171 |
| MS.gene069198.t1 | AT5G14650 | 36.429 | 280 | 166 | 8 | 2 | 276 | 68 | 340 | 2.70e-49 | 169 |
| MS.gene069198.t1 | AT5G44830 | 35.769 | 260 | 144 | 5 | 19 | 273 | 10 | 251 | 1.12e-48 | 164 |
| MS.gene069198.t1 | AT1G80140 | 36.803 | 269 | 152 | 6 | 18 | 278 | 2 | 260 | 1.36e-48 | 164 |
| MS.gene069198.t1 | AT5G39910 | 34.859 | 284 | 154 | 8 | 2 | 276 | 53 | 314 | 4.39e-48 | 164 |
| MS.gene069198.t1 | AT1G48100 | 33.916 | 286 | 173 | 6 | 3 | 276 | 98 | 379 | 4.84e-48 | 166 |
| MS.gene069198.t1 | AT4G32375 | 38.498 | 213 | 122 | 2 | 59 | 271 | 8 | 211 | 1.91e-47 | 164 |
| MS.gene069198.t1 | AT1G56710 | 33.333 | 294 | 178 | 6 | 2 | 281 | 65 | 354 | 2.82e-47 | 163 |
| MS.gene069198.t1 | AT4G32380 | 35.231 | 281 | 166 | 6 | 2 | 276 | 44 | 314 | 4.86e-47 | 162 |
| MS.gene069198.t1 | AT1G60590 | 30.519 | 308 | 178 | 5 | 2 | 276 | 140 | 444 | 5.37e-47 | 165 |
| MS.gene069198.t1 | AT1G10640 | 31.475 | 305 | 176 | 4 | 2 | 276 | 136 | 437 | 1.68e-46 | 163 |
| MS.gene069198.t1 | AT4G35670 | 39.171 | 217 | 124 | 2 | 64 | 280 | 2 | 210 | 1.13e-45 | 155 |
| MS.gene069198.t1 | AT5G14650 | 37.190 | 242 | 143 | 7 | 2 | 238 | 68 | 305 | 3.59e-44 | 152 |
| MS.gene069198.t1 | AT1G19170 | 26.512 | 215 | 129 | 6 | 73 | 270 | 195 | 397 | 6.95e-12 | 65.9 |
| MS.gene069198.t1 | AT4G23820 | 27.570 | 214 | 134 | 5 | 73 | 274 | 148 | 352 | 9.26e-12 | 65.5 |
Find 0 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTCTAATATACAAA+AGG | + | 56974:5210-5229 | MS.gene069198:intron | 10.0% |
| !! | ATTATCTCATTATTAACAAA+AGG | + | 56974:6317-6336 | MS.gene069198:intron | 15.0% |
| !! | TTAACAAAAAAAAAACGATA+AGG | + | 56974:4943-4962 | MS.gene069198:intron | 15.0% |
| !!! | TATCATGATTTTGATTTTAA+TGG | - | 56974:5080-5099 | None:intergenic | 15.0% |
| !! | AAAGTCATTTCGTATTATTT+GGG | + | 56974:5452-5471 | MS.gene069198:CDS | 20.0% |
| !! | ATATAAAATGAACTTACAGT+AGG | - | 56974:4689-4708 | None:intergenic | 20.0% |
| !! | CTAATTTCTTAACTAAATAG+TGG | - | 56974:5173-5192 | None:intergenic | 20.0% |
| !! | GAGAGGAAAAAAAATATAAA+TGG | + | 56974:4828-4847 | MS.gene069198:intron | 20.0% |
| !! | TGAAATAAATCATCAAACAT+TGG | + | 56974:5110-5129 | MS.gene069198:intron | 20.0% |
| !! | TTATCAGTCTTAAATGAATA+TGG | - | 56974:4545-4564 | None:intergenic | 20.0% |
| !!! | AATGTGTGTTTATTTGTTAA+GGG | + | 56974:6183-6202 | MS.gene069198:intron | 20.0% |
| !!! | ATATATTTTGTGGATATGTT+TGG | + | 56974:5361-5380 | MS.gene069198:intron | 20.0% |
| !!! | ATTCATTTAAGACTGATAAT+TGG | + | 56974:4546-4565 | MS.gene069198:CDS | 20.0% |
| !!! | GAAATAATCTGCATTTTTTA+TGG | + | 56974:6410-6429 | MS.gene069198:intron | 20.0% |
| ! | AAACTTATAAAAGACTAAGC+TGG | - | 56974:5955-5974 | None:intergenic | 25.0% |
| ! | AACTTATAAAAGACTAAGCT+GGG | - | 56974:5954-5973 | None:intergenic | 25.0% |
| ! | ATAATCTTGATCAATGACAA+TGG | - | 56974:5863-5882 | None:intergenic | 25.0% |
| ! | CAAAGTCATTTCGTATTATT+TGG | + | 56974:5451-5470 | MS.gene069198:CDS | 25.0% |
| ! | TAATCTTGATCAATGACAAT+GGG | - | 56974:5862-5881 | None:intergenic | 25.0% |
| ! | TACAAAAATATTAGAGGAAG+TGG | + | 56974:6051-6070 | MS.gene069198:intron | 25.0% |
| ! | TATGTTAACAAATTGACTGT+TGG | + | 56974:4581-4600 | MS.gene069198:CDS | 25.0% |
| ! | TTAAATGAATATGGATCACT+TGG | - | 56974:4536-4555 | None:intergenic | 25.0% |
| ! | TTAACAAAAGGATTCTACAT+CGG | + | 56974:6329-6348 | MS.gene069198:intron | 25.0% |
| !! | AATACATGTACATACCTTTT+TGG | - | 56974:5905-5924 | None:intergenic | 25.0% |
| !! | AATATTTCAAGTGTGAACAT+TGG | + | 56974:5568-5587 | MS.gene069198:CDS | 25.0% |
| !! | ATTACTAAAGCTCATTTTGT+TGG | + | 56974:4910-4929 | MS.gene069198:intron | 25.0% |
| !! | CAATGTGTGTTTATTTGTTA+AGG | + | 56974:6182-6201 | MS.gene069198:intron | 25.0% |
| !! | GTCATGTTTAATTAGTTTCT+AGG | + | 56974:5040-5059 | MS.gene069198:intron | 25.0% |
| !! | TCTGACAATAATTTTGTGTA+GGG | + | 56974:5997-6016 | MS.gene069198:intron | 25.0% |
| !! | TTACTAAAGCTCATTTTGTT+GGG | + | 56974:4911-4930 | MS.gene069198:intron | 25.0% |
| !! | TTCTGACAATAATTTTGTGT+AGG | + | 56974:5996-6015 | MS.gene069198:intron | 25.0% |
| !!! | ATCGTTTTATTCAAAATGAG+AGG | + | 56974:4811-4830 | MS.gene069198:intron | 25.0% |
| !!! | TGATTTTGATTTTAATGGTG+AGG | - | 56974:5075-5094 | None:intergenic | 25.0% |
| !!! | TGGATGAACTTTAAAATTGA+AGG | + | 56974:4497-4516 | MS.gene069198:CDS | 25.0% |
| AAAAACGATAAGGTAGAGTA+TGG | + | 56974:4953-4972 | MS.gene069198:intron | 30.0% | |
| AACACAGATGGTATCAAAAT+AGG | + | 56974:5529-5548 | MS.gene069198:CDS | 30.0% | |
| AAGTGTACAAATAAGCAATG+TGG | + | 56974:6026-6045 | MS.gene069198:intron | 30.0% | |
| ACACAGATGGTATCAAAATA+GGG | + | 56974:5530-5549 | MS.gene069198:CDS | 30.0% | |
| AGAAGGGACATATATACTTA+AGG | + | 56974:4445-4464 | MS.gene069198:CDS | 30.0% | |
| AGTATGGAAAAAGTAGAGAT+TGG | + | 56974:4969-4988 | MS.gene069198:intron | 30.0% | |
| CTTAAGGAAGTTGTATTTAG+TGG | + | 56974:4461-4480 | MS.gene069198:CDS | 30.0% | |
| GTCTCAATTGAAGAAAACTT+TGG | + | 56974:5786-5805 | MS.gene069198:CDS | 30.0% | |
| GTGGCTTACAAAAATATTAG+AGG | + | 56974:6045-6064 | MS.gene069198:intron | 30.0% | |
| GTTAAGAATTGTACCTTTAG+TGG | + | 56974:5730-5749 | MS.gene069198:CDS | 30.0% | |
| TAAGTATATATGTCCCTTCT+GGG | - | 56974:4445-4464 | None:intergenic | 30.0% | |
| TACTAGGAATGTTCGAATTT+CGG | + | 56974:5624-5643 | MS.gene069198:CDS | 30.0% | |
| TATACCCTATGAAATTGATG+TGG | + | 56974:4734-4753 | MS.gene069198:intron | 30.0% | |
| TGTGTATGAAGATATTGTGA+TGG | + | 56974:5822-5841 | MS.gene069198:CDS | 30.0% | |
| TTAAGTATATATGTCCCTTC+TGG | - | 56974:4446-4465 | None:intergenic | 30.0% | |
| ! | ATAGTGGGGTTATTTCATTT+AGG | + | 56974:6245-6264 | MS.gene069198:intron | 30.0% |
| ! | CTGACAATAATTTTGTGTAG+GGG | + | 56974:5998-6017 | MS.gene069198:intron | 30.0% |
| ! | GAGATAGAGTGTTTGTATTT+CGG | - | 56974:4996-5015 | None:intergenic | 30.0% |
| ! | TGACAATAATTTTGTGTAGG+GGG | + | 56974:5999-6018 | MS.gene069198:intron | 30.0% |
| !! | ATTTTGATACCATCTGTGTT+GGG | - | 56974:5529-5548 | None:intergenic | 30.0% |
| !!! | TATTTTGATACCATCTGTGT+TGG | - | 56974:5530-5549 | None:intergenic | 30.0% |
| !!! | TGAAGGCATTTTTAAAAGCA+TGG | + | 56974:4378-4397 | MS.gene069198:CDS | 30.0% |
| AATAGAATCTCTTCTCTCTC+TGG | + | 56974:6268-6287 | MS.gene069198:intron | 35.0% | |
| ACATCGGTGTAATCTTAGTA+AGG | + | 56974:6345-6364 | MS.gene069198:intron | 35.0% | |
| ATCAAAATAGGGAGGTCAAA+TGG | + | 56974:5541-5560 | MS.gene069198:CDS | 35.0% | |
| ATCTGCCACATCAATTTCAT+AGG | - | 56974:4742-4761 | None:intergenic | 35.0% | |
| CCCTTCTTGCATAAAATAGT+GGG | + | 56974:6230-6249 | MS.gene069198:intron | 35.0% | |
| CCTTCTTGCATAAAATAGTG+GGG | + | 56974:6231-6250 | MS.gene069198:intron | 35.0% | |
| GGTCAAAAGAACAAGCATTA+AGG | - | 56974:5152-5171 | None:intergenic | 35.0% | |
| GTTAACAAATTGACTGTTGG+TGG | + | 56974:4584-4603 | MS.gene069198:CDS | 35.0% | |
| TCTGCCACATCAATTTCATA+GGG | - | 56974:4741-4760 | None:intergenic | 35.0% | |
| ! | AAATTTGACTTCATCGCCAA+TGG | + | 56974:5394-5413 | MS.gene069198:CDS | 35.0% |
| ! | ATGGTATGAAACCTTTTGAC+AGG | + | 56974:6429-6448 | MS.gene069198:intron | 35.0% |
| ! | ATGGTGTTAGAATCAAATCG+TGG | + | 56974:5761-5780 | MS.gene069198:CDS | 35.0% |
| ! | CACTATTTTATGCAAGAAGG+GGG | - | 56974:6231-6250 | None:intergenic | 35.0% |
| ! | CCACTATTTTATGCAAGAAG+GGG | - | 56974:6232-6251 | None:intergenic | 35.0% |
| ! | CCCACTATTTTATGCAAGAA+GGG | - | 56974:6233-6252 | None:intergenic | 35.0% |
| ! | CTCATTTTGTTGGGAATTGA+GGG | + | 56974:4920-4939 | MS.gene069198:intron | 35.0% |
| ! | GAGTGGAGGATATTAATTTG+CGG | + | 56974:6133-6152 | MS.gene069198:intron | 35.0% |
| ! | TATCCTCCACTCTAATGTTT+TGG | - | 56974:6125-6144 | None:intergenic | 35.0% |
| ! | TGGTGTTAGAATCAAATCGT+GGG | + | 56974:5762-5781 | MS.gene069198:CDS | 35.0% |
| ! | TGTTGATAGATTCCATGTGA+TGG | - | 56974:5426-5445 | None:intergenic | 35.0% |
| ! | TTTTGATACCATCTGTGTTG+GGG | - | 56974:5528-5547 | None:intergenic | 35.0% |
| !! | TTTGTTAAGGGTGCTAGTTA+TGG | + | 56974:6195-6214 | MS.gene069198:intron | 35.0% |
| !!! | CGAATTTCGGATGTTTTTTG+TGG | + | 56974:5637-5656 | MS.gene069198:CDS | 35.0% |
| ACAATGTGATTGAGCTCAAG+CGG | + | 56974:4865-4884 | MS.gene069198:intron | 40.0% | |
| ACCATGCCAAAACATTAGAG+TGG | + | 56974:6116-6135 | MS.gene069198:intron | 40.0% | |
| ACCTTTAGTGGCACAAGTAA+TGG | + | 56974:5742-5761 | MS.gene069198:CDS | 40.0% | |
| ATGCCAAAACATTAGAGTGG+AGG | + | 56974:6119-6138 | MS.gene069198:intron | 40.0% | |
| CAATGGTTATGTCCATCACA+TGG | + | 56974:5411-5430 | MS.gene069198:CDS | 40.0% | |
| CAGATGGTATCAAAATAGGG+AGG | + | 56974:5533-5552 | MS.gene069198:CDS | 40.0% | |
| CATAGCAATGCAATCATCAC+CGG | - | 56974:5596-5615 | None:intergenic | 40.0% | |
| CCCCTTCTTGCATAAAATAG+TGG | + | 56974:6229-6248 | MS.gene069198:intron | 40.0% | |
| GGAAGTCTTGGTAAGAATGA+AGG | + | 56974:5682-5701 | MS.gene069198:CDS | 40.0% | |
| TCAAGTGTGAACATTGGAAC+CGG | + | 56974:5574-5593 | MS.gene069198:CDS | 40.0% | |
| TGATTGCATTGCTATGCTCT+CGG | + | 56974:5600-5619 | MS.gene069198:CDS | 40.0% | |
| ! | AACAAATTGACTGTTGGTGG+AGG | + | 56974:4587-4606 | MS.gene069198:CDS | 40.0% |
| ! | AAGTTCATCCAAGCATTGCA+TGG | - | 56974:4488-4507 | None:intergenic | 40.0% |
| ! | ACCATTACTTGTGCCACTAA+AGG | - | 56974:5746-5765 | None:intergenic | 40.0% |
| ! | AGTCTTTTACTACGACCAGA+AGG | - | 56974:6159-6178 | None:intergenic | 40.0% |
| ! | CAACTGTTTTCATCCCAGAA+GGG | + | 56974:4429-4448 | MS.gene069198:CDS | 40.0% |
| ! | CCCCACTATTTTATGCAAGA+AGG | - | 56974:6234-6253 | None:intergenic | 40.0% |
| ! | GCTCATTTTGTTGGGAATTG+AGG | + | 56974:4919-4938 | MS.gene069198:intron | 40.0% |
| !! | CATGTGATGGACATAACCAT+TGG | - | 56974:5413-5432 | None:intergenic | 40.0% |
| !! | GATATTAATTTGCGGCCTTC+TGG | + | 56974:6141-6160 | MS.gene069198:intron | 40.0% |
| !! | GTACATACCTTTTTGGTGCA+CGG | - | 56974:5898-5917 | None:intergenic | 40.0% |
| !!! | TCCACTCTAATGTTTTGGCA+TGG | - | 56974:6120-6139 | None:intergenic | 40.0% |
| AATGATAGCCCCAACACAGA+TGG | + | 56974:5517-5536 | MS.gene069198:CDS | 45.0% | |
| AGTGATGCATGCAGATGGAA+TGG | + | 56974:4401-4420 | MS.gene069198:CDS | 45.0% | |
| ATCTGTGTTGGGGCTATCAT+TGG | - | 56974:5518-5537 | None:intergenic | 45.0% | |
| ATGGTCAAGGATCTTCTGCT+TGG | + | 56974:4621-4640 | MS.gene069198:CDS | 45.0% | |
| CCTGGTCATGGAATTAGTGT+CGG | + | 56974:5661-5680 | MS.gene069198:CDS | 45.0% | |
| GATTGCATTGCTATGCTCTC+GGG | + | 56974:5601-5620 | MS.gene069198:CDS | 45.0% | |
| TCTGTGTTGGGGCTATCATT+GGG | - | 56974:5517-5536 | None:intergenic | 45.0% | |
| TTAGTGGTCCATGCAATGCT+TGG | + | 56974:4477-4496 | MS.gene069198:CDS | 45.0% | |
| ! | AAATTGACTGTTGGTGGAGG+TGG | + | 56974:4590-4609 | MS.gene069198:CDS | 45.0% |
| ! | GCAACTGTTTTCATCCCAGA+AGG | + | 56974:4428-4447 | MS.gene069198:CDS | 45.0% |
| ! | GGAATTAGTGTCGGAAGTCT+TGG | + | 56974:5670-5689 | MS.gene069198:CDS | 45.0% |
| ! | TGCAAGAAGGGGGATTTTGT+TGG | - | 56974:6221-6240 | None:intergenic | 45.0% |
| !!! | GTTTTTTGTGGTCCTGGTCA+TGG | + | 56974:5649-5668 | MS.gene069198:CDS | 45.0% |
| !!! | TCGGATGTTTTTTGTGGTCC+TGG | + | 56974:5643-5662 | MS.gene069198:CDS | 45.0% |
| !!! | ATGTATTTTTTTTTAAATAA+TGG | - | 56974:5277-5296 | None:intergenic | 5.0% |
| !!! | ATTTTGTTATTAAAAATTAA+GGG | - | 56974:4786-4805 | None:intergenic | 5.0% |
| !!! | TATTTTGTTATTAAAAATTA+AGG | - | 56974:4787-4806 | None:intergenic | 5.0% |
| !!! | TTAAAATTTTATATATTTTG+TGG | + | 56974:5351-5370 | MS.gene069198:intron | 5.0% |
| CATGGAGTGATGCATGCAGA+TGG | + | 56974:4396-4415 | MS.gene069198:CDS | 50.0% | |
| CCGACACTAATTCCATGACC+AGG | - | 56974:5664-5683 | None:intergenic | 50.0% | |
| CTGTGTTGGGGCTATCATTG+GGG | - | 56974:5516-5535 | None:intergenic | 50.0% | |
| TGTGTTGGGGCTATCATTGG+GGG | - | 56974:5515-5534 | None:intergenic | 50.0% | |
| TTGCTATGCTCTCGGGTACT+AGG | + | 56974:5608-5627 | MS.gene069198:CDS | 50.0% | |
| !! | CATACCTTTTTGGTGCACGG+AGG | - | 56974:5895-5914 | None:intergenic | 50.0% |
| ACGTCCTCCGTGCACCAAAA+AGG | + | 56974:5888-5907 | MS.gene069198:CDS | 55.0% | |
| GGTGGCAGATTGGATGGTCA+AGG | + | 56974:4608-4627 | MS.gene069198:CDS | 55.0% | |
| ! | TGTTGGTGGAGGTGGCAGAT+TGG | + | 56974:4598-4617 | MS.gene069198:CDS | 55.0% |
| !! | TTTTTGGTGCACGGAGGACG+TGG | - | 56974:5889-5908 | None:intergenic | 55.0% |
| GGTGGAGGTGGCAGATTGGA+TGG | + | 56974:4602-4621 | MS.gene069198:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56974 | gene | 4377 | 6459 | 4377 | ID=MS.gene069198 |
| 56974 | mRNA | 4377 | 6459 | 4377 | ID=MS.gene069198.t1;Parent=MS.gene069198 |
| 56974 | exon | 4377 | 4691 | 4377 | ID=MS.gene069198.t1.exon1;Parent=MS.gene069198.t1 |
| 56974 | CDS | 4377 | 4691 | 4377 | ID=cds.MS.gene069198.t1;Parent=MS.gene069198.t1 |
| 56974 | exon | 5388 | 5909 | 5388 | ID=MS.gene069198.t1.exon2;Parent=MS.gene069198.t1 |
| 56974 | CDS | 5388 | 5909 | 5388 | ID=cds.MS.gene069198.t1;Parent=MS.gene069198.t1 |
| 56974 | exon | 6451 | 6459 | 6451 | ID=MS.gene069198.t1.exon3;Parent=MS.gene069198.t1 |
| 56974 | CDS | 6451 | 6459 | 6451 | ID=cds.MS.gene069198.t1;Parent=MS.gene069198.t1 |
| Gene Sequence |
| Protein sequence |
