Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028767.t1 | XP_003597144.1 | 88.7 | 496 | 56 | 0 | 1 | 496 | 54 | 549 | 1.40E-253 | 885.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028767.t1 | Q9M1E1 | 50.7 | 503 | 229 | 4 | 1 | 496 | 54 | 544 | 1.5e-142 | 507.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028767.t1 | G7IU45 | 88.7 | 496 | 56 | 0 | 1 | 496 | 54 | 549 | 1.0e-253 | 885.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene028767 | MS.gene043570 | PPI |
MS.gene31325 | MS.gene028767 | PPI |
MS.gene028767 | MS.gene043554 | PPI |
MS.gene93924 | MS.gene028767 | PPI |
MS.gene043168 | MS.gene028767 | PPI |
MS.gene028767 | MS.gene31324 | PPI |
MS.gene028767 | MS.gene043167 | PPI |
MS.gene028767 | MS.gene028768 | PPI |
MS.gene31340 | MS.gene028767 | PPI |
MS.gene48607 | MS.gene028767 | PPI |
MS.gene028767 | MS.gene42839 | PPI |
MS.gene48611 | MS.gene028767 | PPI |
MS.gene028748 | MS.gene028767 | PPI |
MS.gene028767 | MS.gene043550 | PPI |
MS.gene028767 | MS.gene028747 | PPI |
MS.gene043163 | MS.gene028767 | PPI |
MS.gene31341 | MS.gene028767 | PPI |
MS.gene42840 | MS.gene028767 | PPI |
MS.gene48608 | MS.gene028767 | PPI |
MS.gene028767 | MS.gene48605 | PPI |
MS.gene93925 | MS.gene028767 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028767.t1 | MTR_2g093160 | 88.710 | 496 | 56 | 0 | 1 | 496 | 54 | 549 | 0.0 | 892 |
MS.gene028767.t1 | MTR_2g093180 | 90.763 | 498 | 43 | 2 | 1 | 496 | 54 | 550 | 0.0 | 855 |
MS.gene028767.t1 | MTR_2g093640 | 80.404 | 495 | 95 | 2 | 3 | 496 | 56 | 549 | 0.0 | 787 |
MS.gene028767.t1 | MTR_4g107530 | 33.716 | 522 | 308 | 8 | 4 | 495 | 69 | 582 | 8.86e-99 | 310 |
MS.gene028767.t1 | MTR_3g112460 | 35.271 | 499 | 294 | 8 | 10 | 492 | 65 | 550 | 1.31e-97 | 306 |
MS.gene028767.t1 | MTR_4g107580 | 35.057 | 522 | 300 | 11 | 4 | 494 | 60 | 573 | 3.57e-97 | 305 |
MS.gene028767.t1 | MTR_4g107510 | 34.417 | 523 | 303 | 10 | 4 | 495 | 72 | 585 | 1.67e-95 | 301 |
MS.gene028767.t1 | MTR_5g038060 | 34.884 | 516 | 308 | 8 | 3 | 494 | 66 | 577 | 1.79e-95 | 301 |
MS.gene028767.t1 | MTR_8g469480 | 34.615 | 520 | 308 | 9 | 3 | 496 | 73 | 586 | 3.26e-95 | 300 |
MS.gene028767.t1 | MTR_3g112470 | 34.469 | 499 | 298 | 8 | 10 | 492 | 65 | 550 | 8.94e-93 | 293 |
MS.gene028767.t1 | MTR_5g055000 | 33.792 | 509 | 309 | 9 | 10 | 496 | 60 | 562 | 1.77e-92 | 293 |
MS.gene028767.t1 | MTR_7g067010 | 32.685 | 514 | 319 | 7 | 2 | 496 | 58 | 563 | 1.64e-91 | 290 |
MS.gene028767.t1 | MTR_4g107610 | 33.201 | 503 | 313 | 7 | 1 | 484 | 64 | 562 | 1.74e-90 | 288 |
MS.gene028767.t1 | MTR_3g462710 | 32.171 | 516 | 319 | 10 | 2 | 495 | 58 | 564 | 1.33e-87 | 280 |
MS.gene028767.t1 | MTR_4g015080 | 31.712 | 514 | 324 | 7 | 2 | 496 | 68 | 573 | 8.29e-87 | 278 |
MS.gene028767.t1 | MTR_7g088825 | 32.101 | 514 | 324 | 9 | 2 | 494 | 56 | 565 | 4.37e-86 | 277 |
MS.gene028767.t1 | MTR_4g011280 | 33.205 | 518 | 306 | 14 | 1 | 491 | 65 | 569 | 2.10e-85 | 275 |
MS.gene028767.t1 | MTR_5g012290 | 34.442 | 511 | 300 | 12 | 11 | 495 | 70 | 571 | 2.86e-85 | 274 |
MS.gene028767.t1 | MTR_5g038190 | 30.368 | 517 | 332 | 9 | 1 | 494 | 57 | 568 | 7.09e-85 | 273 |
MS.gene028767.t1 | MTR_2g101590 | 34.252 | 508 | 296 | 14 | 11 | 491 | 69 | 565 | 1.29e-84 | 274 |
MS.gene028767.t1 | MTR_4g114340 | 34.638 | 511 | 305 | 9 | 1 | 492 | 57 | 557 | 3.99e-84 | 271 |
MS.gene028767.t1 | MTR_2g101650 | 34.291 | 522 | 305 | 15 | 2 | 496 | 58 | 568 | 4.36e-84 | 271 |
MS.gene028767.t1 | MTR_5g012270 | 32.495 | 517 | 314 | 11 | 5 | 495 | 66 | 573 | 6.29e-84 | 270 |
MS.gene028767.t1 | MTR_3g069500 | 32.866 | 499 | 310 | 10 | 10 | 496 | 77 | 562 | 1.28e-83 | 270 |
MS.gene028767.t1 | MTR_4g101380 | 33.526 | 519 | 309 | 10 | 5 | 495 | 64 | 574 | 2.10e-83 | 270 |
MS.gene028767.t1 | MTR_2g101610 | 33.006 | 509 | 301 | 13 | 11 | 491 | 70 | 566 | 7.21e-83 | 269 |
MS.gene028767.t1 | MTR_3g112450 | 33.733 | 501 | 301 | 11 | 10 | 492 | 65 | 552 | 3.91e-82 | 265 |
MS.gene028767.t1 | MTR_3g462710 | 33.333 | 462 | 277 | 10 | 56 | 495 | 3 | 455 | 5.55e-82 | 262 |
MS.gene028767.t1 | MTR_8g469470 | 31.599 | 519 | 330 | 8 | 1 | 495 | 65 | 582 | 1.97e-81 | 264 |
MS.gene028767.t1 | MTR_7g088820 | 30.739 | 514 | 331 | 8 | 2 | 494 | 59 | 568 | 1.07e-79 | 259 |
MS.gene028767.t1 | MTR_2g101640 | 32.558 | 516 | 314 | 12 | 1 | 491 | 56 | 562 | 1.91e-79 | 260 |
MS.gene028767.t1 | MTR_8g103233 | 32.364 | 516 | 312 | 13 | 1 | 491 | 50 | 553 | 2.23e-79 | 258 |
MS.gene028767.t1 | MTR_3g069440 | 32.742 | 507 | 308 | 9 | 11 | 496 | 76 | 570 | 2.28e-79 | 259 |
MS.gene028767.t1 | MTR_1g057460 | 33.399 | 509 | 300 | 14 | 1 | 491 | 6 | 493 | 3.91e-79 | 256 |
MS.gene028767.t1 | MTR_7g088820 | 30.769 | 507 | 326 | 8 | 9 | 494 | 4 | 506 | 5.76e-79 | 256 |
MS.gene028767.t1 | MTR_1g057460 | 33.399 | 509 | 300 | 14 | 1 | 491 | 77 | 564 | 2.11e-78 | 256 |
MS.gene028767.t1 | MTR_7g088790 | 31.518 | 514 | 327 | 8 | 2 | 494 | 63 | 572 | 9.08e-78 | 255 |
MS.gene028767.t1 | MTR_4g019580 | 31.349 | 504 | 317 | 10 | 11 | 496 | 79 | 571 | 1.64e-77 | 254 |
MS.gene028767.t1 | MTR_7g065080 | 30.800 | 500 | 319 | 10 | 11 | 496 | 74 | 560 | 4.53e-77 | 253 |
MS.gene028767.t1 | MTR_4g033325 | 33.725 | 510 | 282 | 12 | 10 | 495 | 73 | 550 | 1.49e-76 | 250 |
MS.gene028767.t1 | MTR_1g026740 | 33.918 | 513 | 295 | 18 | 9 | 491 | 55 | 553 | 2.25e-76 | 250 |
MS.gene028767.t1 | MTR_2g101560 | 32.692 | 520 | 308 | 14 | 1 | 491 | 60 | 566 | 2.92e-76 | 252 |
MS.gene028767.t1 | MTR_1g042310 | 28.937 | 508 | 331 | 8 | 8 | 494 | 22 | 520 | 1.00e-75 | 248 |
MS.gene028767.t1 | MTR_1g042310 | 28.937 | 508 | 331 | 8 | 8 | 494 | 29 | 527 | 1.07e-75 | 248 |
MS.gene028767.t1 | MTR_1g042310 | 28.937 | 508 | 331 | 8 | 8 | 494 | 66 | 564 | 1.89e-75 | 248 |
MS.gene028767.t1 | MTR_1g009200 | 33.269 | 517 | 305 | 13 | 2 | 491 | 61 | 564 | 2.94e-75 | 248 |
MS.gene028767.t1 | MTR_7g098200 | 29.412 | 510 | 328 | 8 | 8 | 495 | 69 | 568 | 3.07e-75 | 248 |
MS.gene028767.t1 | MTR_7g098220 | 29.981 | 517 | 330 | 9 | 2 | 496 | 20 | 526 | 3.46e-75 | 247 |
MS.gene028767.t1 | MTR_7g065080 | 30.453 | 486 | 311 | 10 | 25 | 496 | 1 | 473 | 6.69e-75 | 244 |
MS.gene028767.t1 | MTR_0236s0050 | 32.809 | 509 | 303 | 14 | 1 | 491 | 6 | 493 | 6.87e-75 | 244 |
MS.gene028767.t1 | MTR_7g098220 | 29.981 | 517 | 330 | 9 | 2 | 496 | 64 | 570 | 1.11e-74 | 246 |
MS.gene028767.t1 | MTR_7g098200 | 29.594 | 517 | 308 | 10 | 8 | 495 | 69 | 558 | 1.99e-74 | 246 |
MS.gene028767.t1 | MTR_2g017750 | 30.814 | 516 | 323 | 11 | 10 | 494 | 76 | 588 | 3.51e-74 | 245 |
MS.gene028767.t1 | MTR_7g005930 | 30.800 | 500 | 324 | 8 | 8 | 492 | 75 | 567 | 3.59e-74 | 245 |
MS.gene028767.t1 | MTR_7g098040 | 27.505 | 509 | 337 | 8 | 8 | 494 | 74 | 572 | 5.43e-74 | 245 |
MS.gene028767.t1 | MTR_1g026750 | 34.436 | 514 | 293 | 18 | 8 | 491 | 55 | 554 | 2.64e-73 | 242 |
MS.gene028767.t1 | MTR_7g098180 | 29.821 | 503 | 314 | 11 | 20 | 496 | 83 | 572 | 4.44e-73 | 243 |
MS.gene028767.t1 | MTR_1g041875 | 28.842 | 475 | 315 | 7 | 15 | 475 | 76 | 541 | 5.74e-73 | 242 |
MS.gene028767.t1 | MTR_1g075440 | 29.651 | 516 | 317 | 9 | 8 | 494 | 68 | 566 | 6.50e-73 | 242 |
MS.gene028767.t1 | MTR_7g098090 | 28.462 | 520 | 335 | 9 | 2 | 494 | 67 | 576 | 2.59e-72 | 241 |
MS.gene028767.t1 | MTR_7g064780 | 32.008 | 503 | 320 | 8 | 3 | 485 | 61 | 561 | 3.06e-72 | 240 |
MS.gene028767.t1 | MTR_7g098160 | 28.681 | 523 | 325 | 11 | 2 | 494 | 67 | 571 | 3.36e-72 | 240 |
MS.gene028767.t1 | MTR_3g072300 | 30.350 | 514 | 327 | 11 | 3 | 495 | 59 | 562 | 6.51e-72 | 239 |
MS.gene028767.t1 | MTR_7g088820 | 31.236 | 461 | 292 | 8 | 55 | 494 | 2 | 458 | 3.87e-71 | 234 |
MS.gene028767.t1 | MTR_2g093650 | 65.426 | 188 | 22 | 2 | 285 | 472 | 34 | 178 | 4.08e-71 | 225 |
MS.gene028767.t1 | MTR_1g041885 | 28.330 | 473 | 316 | 7 | 19 | 477 | 33 | 496 | 5.36e-71 | 235 |
MS.gene028767.t1 | MTR_3g100980 | 30.233 | 516 | 320 | 12 | 5 | 496 | 53 | 552 | 2.03e-70 | 234 |
MS.gene028767.t1 | MTR_3g069420 | 31.164 | 507 | 316 | 10 | 11 | 496 | 77 | 571 | 2.04e-70 | 235 |
MS.gene028767.t1 | MTR_7g098230 | 28.046 | 517 | 337 | 8 | 1 | 495 | 62 | 565 | 3.79e-70 | 234 |
MS.gene028767.t1 | MTR_3g014790 | 30.039 | 516 | 305 | 11 | 10 | 495 | 59 | 548 | 5.94e-70 | 233 |
MS.gene028767.t1 | MTR_4g098800 | 29.804 | 510 | 332 | 9 | 10 | 495 | 76 | 583 | 7.17e-70 | 234 |
MS.gene028767.t1 | MTR_0294s0020 | 32.283 | 508 | 290 | 11 | 11 | 495 | 74 | 550 | 1.18e-69 | 232 |
MS.gene028767.t1 | MTR_2g005130 | 30.572 | 507 | 323 | 7 | 1 | 494 | 73 | 563 | 1.59e-69 | 233 |
MS.gene028767.t1 | MTR_4g098800 | 29.804 | 510 | 332 | 9 | 10 | 495 | 141 | 648 | 2.46e-69 | 234 |
MS.gene028767.t1 | MTR_5g085850 | 30.159 | 504 | 328 | 11 | 3 | 494 | 65 | 556 | 2.49e-69 | 232 |
MS.gene028767.t1 | MTR_5g014150 | 30.357 | 504 | 327 | 9 | 10 | 492 | 86 | 586 | 4.36e-69 | 232 |
MS.gene028767.t1 | MTR_4g033325 | 33.405 | 467 | 255 | 12 | 53 | 495 | 18 | 452 | 6.59e-69 | 228 |
MS.gene028767.t1 | MTR_1g026770 | 31.384 | 513 | 316 | 14 | 3 | 491 | 50 | 550 | 1.01e-68 | 230 |
MS.gene028767.t1 | MTR_1g041835 | 28.884 | 502 | 314 | 9 | 20 | 494 | 79 | 564 | 1.63e-68 | 230 |
MS.gene028767.t1 | MTR_7g098200 | 29.870 | 462 | 292 | 8 | 56 | 495 | 3 | 454 | 1.89e-68 | 227 |
MS.gene028767.t1 | MTR_1g116930 | 30.279 | 502 | 328 | 10 | 10 | 496 | 65 | 559 | 2.37e-68 | 229 |
MS.gene028767.t1 | MTR_4g033325 | 33.638 | 437 | 246 | 10 | 83 | 495 | 10 | 426 | 2.78e-68 | 225 |
MS.gene028767.t1 | MTR_4g033395 | 33.628 | 452 | 253 | 10 | 10 | 443 | 74 | 496 | 2.88e-68 | 227 |
MS.gene028767.t1 | MTR_1g041815 | 29.175 | 497 | 321 | 7 | 19 | 494 | 78 | 564 | 7.24e-68 | 228 |
MS.gene028767.t1 | MTR_4g033315 | 31.827 | 509 | 295 | 12 | 10 | 495 | 73 | 552 | 1.07e-67 | 227 |
MS.gene028767.t1 | MTR_4g033310 | 31.827 | 509 | 295 | 12 | 10 | 495 | 73 | 552 | 1.07e-67 | 227 |
MS.gene028767.t1 | MTR_7g010820 | 31.323 | 514 | 312 | 11 | 10 | 493 | 68 | 570 | 1.25e-67 | 228 |
MS.gene028767.t1 | MTR_7g013270 | 29.703 | 505 | 331 | 8 | 8 | 495 | 130 | 627 | 8.97e-67 | 227 |
MS.gene028767.t1 | MTR_7g064800 | 30.620 | 516 | 324 | 10 | 3 | 488 | 61 | 572 | 1.24e-66 | 225 |
MS.gene028767.t1 | MTR_4g033330 | 33.333 | 486 | 272 | 13 | 11 | 473 | 74 | 530 | 2.33e-66 | 223 |
MS.gene028767.t1 | MTR_4g033375 | 33.778 | 450 | 253 | 10 | 11 | 443 | 75 | 496 | 3.63e-66 | 222 |
MS.gene028767.t1 | MTR_5g038380 | 29.014 | 517 | 323 | 11 | 10 | 494 | 70 | 574 | 4.10e-66 | 223 |
MS.gene028767.t1 | MTR_8g469310 | 30.000 | 490 | 306 | 12 | 33 | 494 | 91 | 571 | 6.17e-66 | 223 |
MS.gene028767.t1 | MTR_3g005010 | 30.588 | 510 | 293 | 14 | 10 | 495 | 72 | 544 | 3.51e-65 | 220 |
MS.gene028767.t1 | MTR_3g100980 | 29.228 | 544 | 317 | 14 | 5 | 496 | 53 | 580 | 1.23e-64 | 220 |
MS.gene028767.t1 | MTR_8g087810 | 30.039 | 516 | 327 | 10 | 10 | 494 | 63 | 575 | 6.34e-64 | 218 |
MS.gene028767.t1 | MTR_7g111260 | 28.824 | 510 | 328 | 11 | 3 | 495 | 56 | 547 | 8.07e-64 | 218 |
MS.gene028767.t1 | MTR_8g087780 | 29.126 | 515 | 332 | 9 | 10 | 494 | 63 | 574 | 1.34e-63 | 217 |
MS.gene028767.t1 | MTR_4g033385 | 32.120 | 467 | 264 | 11 | 53 | 495 | 16 | 453 | 1.51e-63 | 214 |
MS.gene028767.t1 | MTR_8g038880 | 30.192 | 520 | 313 | 11 | 4 | 496 | 56 | 552 | 1.71e-63 | 216 |
MS.gene028767.t1 | MTR_4g107670 | 29.297 | 512 | 329 | 12 | 11 | 495 | 67 | 572 | 4.65e-63 | 215 |
MS.gene028767.t1 | MTR_4g123537 | 29.939 | 491 | 309 | 13 | 24 | 495 | 97 | 571 | 8.48e-62 | 213 |
MS.gene028767.t1 | MTR_1g085090 | 27.183 | 504 | 332 | 10 | 10 | 495 | 61 | 547 | 1.56e-60 | 209 |
MS.gene028767.t1 | MTR_7g098150 | 29.114 | 395 | 261 | 5 | 2 | 387 | 67 | 451 | 3.50e-58 | 200 |
MS.gene028767.t1 | MTR_8g091265 | 70.229 | 131 | 34 | 2 | 236 | 361 | 3 | 133 | 1.96e-56 | 184 |
MS.gene028767.t1 | MTR_7g006540 | 28.016 | 514 | 335 | 10 | 10 | 494 | 105 | 612 | 1.30e-55 | 196 |
MS.gene028767.t1 | MTR_7g098210 | 26.667 | 495 | 268 | 10 | 23 | 495 | 22 | 443 | 6.66e-48 | 171 |
MS.gene028767.t1 | MTR_7g051880 | 25.813 | 492 | 322 | 11 | 10 | 491 | 67 | 525 | 1.24e-45 | 167 |
MS.gene028767.t1 | MTR_7g052600 | 25.610 | 492 | 323 | 12 | 10 | 491 | 67 | 525 | 7.59e-45 | 165 |
MS.gene028767.t1 | MTR_7g051830 | 24.390 | 492 | 329 | 10 | 10 | 491 | 67 | 525 | 5.51e-44 | 162 |
MS.gene028767.t1 | MTR_6g008690 | 25.096 | 522 | 333 | 11 | 2 | 492 | 41 | 535 | 1.02e-43 | 162 |
MS.gene028767.t1 | MTR_4g024930 | 25.686 | 510 | 300 | 15 | 19 | 492 | 87 | 553 | 3.11e-41 | 155 |
MS.gene028767.t1 | MTR_1g009170 | 26.683 | 401 | 226 | 11 | 96 | 477 | 9 | 360 | 1.24e-33 | 131 |
MS.gene028767.t1 | MTR_4g033310 | 28.481 | 316 | 193 | 7 | 196 | 495 | 190 | 488 | 7.76e-32 | 128 |
MS.gene028767.t1 | MTR_4g033310 | 36.364 | 132 | 67 | 4 | 10 | 136 | 73 | 192 | 1.20e-12 | 70.5 |
MS.gene028767.t1 | MTR_8g091275 | 63.889 | 72 | 25 | 1 | 144 | 214 | 1 | 72 | 9.41e-26 | 100 |
MS.gene028767.t1 | MTR_8g091480 | 58.929 | 56 | 19 | 1 | 180 | 235 | 38 | 89 | 2.37e-12 | 70.1 |
MS.gene028767.t1 | MTR_3g065350 | 30.000 | 160 | 104 | 5 | 277 | 431 | 1 | 157 | 8.73e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028767.t1 | AT3G45660 | 50.497 | 503 | 230 | 4 | 1 | 496 | 75 | 565 | 0.0 | 526 |
MS.gene028767.t1 | AT3G45660 | 50.497 | 503 | 230 | 4 | 1 | 496 | 54 | 544 | 0.0 | 525 |
MS.gene028767.t1 | AT3G45660 | 50.497 | 503 | 230 | 4 | 1 | 496 | 54 | 544 | 0.0 | 525 |
MS.gene028767.t1 | AT3G45650 | 51.491 | 503 | 225 | 5 | 1 | 496 | 55 | 545 | 0.0 | 524 |
MS.gene028767.t1 | AT3G45710 | 50.101 | 497 | 243 | 3 | 1 | 496 | 54 | 546 | 0.0 | 522 |
MS.gene028767.t1 | AT3G45650 | 48.960 | 529 | 225 | 6 | 1 | 496 | 55 | 571 | 6.83e-177 | 509 |
MS.gene028767.t1 | AT3G45680 | 49.497 | 497 | 245 | 4 | 1 | 496 | 53 | 544 | 4.17e-175 | 504 |
MS.gene028767.t1 | AT3G45700 | 48.185 | 496 | 247 | 4 | 1 | 496 | 49 | 534 | 7.52e-171 | 493 |
MS.gene028767.t1 | AT3G45720 | 46.573 | 496 | 260 | 3 | 1 | 496 | 52 | 542 | 6.67e-166 | 481 |
MS.gene028767.t1 | AT3G45690 | 44.758 | 496 | 229 | 7 | 1 | 496 | 51 | 501 | 8.11e-149 | 436 |
MS.gene028767.t1 | AT1G69870 | 35.756 | 509 | 308 | 7 | 4 | 494 | 87 | 594 | 8.76e-106 | 328 |
MS.gene028767.t1 | AT1G18880 | 36.660 | 521 | 295 | 9 | 4 | 496 | 55 | 568 | 2.32e-104 | 324 |
MS.gene028767.t1 | AT3G47960 | 34.741 | 521 | 301 | 10 | 4 | 494 | 97 | 608 | 1.73e-94 | 300 |
MS.gene028767.t1 | AT2G26690 | 36.149 | 509 | 299 | 9 | 1 | 492 | 12 | 511 | 2.07e-94 | 296 |
MS.gene028767.t1 | AT2G26690 | 36.149 | 509 | 299 | 9 | 1 | 492 | 24 | 523 | 3.22e-94 | 296 |
MS.gene028767.t1 | AT2G26690 | 36.149 | 509 | 299 | 9 | 1 | 492 | 57 | 556 | 9.67e-94 | 296 |
MS.gene028767.t1 | AT5G62680 | 34.659 | 528 | 294 | 12 | 4 | 494 | 79 | 592 | 2.60e-92 | 293 |
MS.gene028767.t1 | AT3G54140 | 31.898 | 511 | 323 | 7 | 3 | 494 | 59 | 563 | 5.05e-91 | 289 |
MS.gene028767.t1 | AT3G54140 | 31.898 | 511 | 323 | 7 | 3 | 494 | 59 | 563 | 5.05e-91 | 289 |
MS.gene028767.t1 | AT1G27080 | 33.069 | 505 | 318 | 7 | 4 | 494 | 8 | 506 | 1.20e-89 | 284 |
MS.gene028767.t1 | AT1G68570 | 34.496 | 516 | 313 | 8 | 3 | 496 | 28 | 540 | 1.33e-89 | 285 |
MS.gene028767.t1 | AT1G68570 | 34.496 | 516 | 313 | 8 | 3 | 496 | 58 | 570 | 2.79e-89 | 285 |
MS.gene028767.t1 | AT1G27080 | 33.069 | 505 | 318 | 7 | 4 | 494 | 50 | 548 | 4.73e-89 | 284 |
MS.gene028767.t1 | AT5G01180 | 32.617 | 512 | 319 | 9 | 3 | 495 | 60 | 564 | 2.16e-88 | 282 |
MS.gene028767.t1 | AT5G01180 | 32.617 | 512 | 319 | 9 | 3 | 495 | 60 | 564 | 2.16e-88 | 282 |
MS.gene028767.t1 | AT5G01180 | 32.617 | 512 | 319 | 9 | 3 | 495 | 60 | 564 | 2.16e-88 | 282 |
MS.gene028767.t1 | AT3G16180 | 32.948 | 519 | 311 | 12 | 1 | 491 | 56 | 565 | 9.32e-87 | 278 |
MS.gene028767.t1 | AT1G52190 | 33.598 | 503 | 294 | 13 | 20 | 491 | 73 | 566 | 1.99e-86 | 278 |
MS.gene028767.t1 | AT1G62200 | 33.797 | 503 | 307 | 9 | 3 | 487 | 87 | 581 | 2.77e-85 | 274 |
MS.gene028767.t1 | AT1G62200 | 32.707 | 532 | 303 | 12 | 3 | 487 | 87 | 610 | 3.55e-81 | 264 |
MS.gene028767.t1 | AT1G62200 | 32.707 | 532 | 303 | 12 | 3 | 487 | 101 | 624 | 6.27e-81 | 264 |
MS.gene028767.t1 | AT3G54450 | 29.143 | 525 | 316 | 9 | 2 | 496 | 46 | 544 | 1.75e-79 | 258 |
MS.gene028767.t1 | AT5G28470 | 30.485 | 515 | 331 | 10 | 1 | 495 | 50 | 557 | 1.86e-77 | 253 |
MS.gene028767.t1 | AT1G12110 | 32.625 | 518 | 311 | 11 | 5 | 495 | 64 | 570 | 8.14e-77 | 252 |
MS.gene028767.t1 | AT3G21670 | 33.267 | 505 | 314 | 11 | 3 | 494 | 64 | 558 | 3.87e-76 | 250 |
MS.gene028767.t1 | AT5G28470 | 29.630 | 513 | 336 | 8 | 1 | 495 | 50 | 555 | 5.85e-76 | 249 |
MS.gene028767.t1 | AT5G46040 | 31.148 | 488 | 307 | 7 | 8 | 475 | 67 | 545 | 3.77e-75 | 248 |
MS.gene028767.t1 | AT2G02020 | 30.019 | 513 | 298 | 8 | 2 | 496 | 76 | 545 | 9.35e-75 | 245 |
MS.gene028767.t1 | AT2G02040 | 30.059 | 509 | 330 | 7 | 8 | 496 | 81 | 583 | 1.21e-74 | 246 |
MS.gene028767.t1 | AT1G27040 | 31.677 | 483 | 292 | 11 | 34 | 493 | 61 | 528 | 7.80e-73 | 240 |
MS.gene028767.t1 | AT1G27040 | 31.677 | 483 | 292 | 11 | 34 | 493 | 93 | 560 | 2.46e-72 | 239 |
MS.gene028767.t1 | AT1G27040 | 31.677 | 483 | 292 | 11 | 34 | 493 | 89 | 556 | 2.71e-72 | 239 |
MS.gene028767.t1 | AT1G69860 | 31.102 | 508 | 325 | 9 | 3 | 495 | 53 | 550 | 1.33e-70 | 235 |
MS.gene028767.t1 | AT3G53960 | 29.644 | 506 | 326 | 13 | 11 | 496 | 80 | 575 | 3.47e-70 | 235 |
MS.gene028767.t1 | AT1G33440 | 30.891 | 505 | 325 | 7 | 2 | 491 | 72 | 567 | 5.00e-70 | 234 |
MS.gene028767.t1 | AT2G37900 | 29.860 | 499 | 326 | 9 | 11 | 496 | 2 | 489 | 1.67e-69 | 230 |
MS.gene028767.t1 | AT5G19640 | 28.803 | 493 | 330 | 8 | 10 | 492 | 101 | 582 | 2.49e-69 | 233 |
MS.gene028767.t1 | AT2G37900 | 29.860 | 499 | 326 | 9 | 11 | 496 | 81 | 568 | 1.14e-68 | 230 |
MS.gene028767.t1 | AT2G40460 | 31.202 | 516 | 304 | 13 | 8 | 495 | 64 | 556 | 1.95e-68 | 230 |
MS.gene028767.t1 | AT1G69850 | 30.709 | 508 | 290 | 13 | 33 | 495 | 90 | 580 | 3.47e-68 | 229 |
MS.gene028767.t1 | AT1G59740 | 29.644 | 506 | 330 | 8 | 1 | 488 | 74 | 571 | 2.94e-66 | 224 |
MS.gene028767.t1 | AT5G46050 | 28.306 | 484 | 316 | 8 | 8 | 470 | 67 | 540 | 2.58e-65 | 221 |
MS.gene028767.t1 | AT1G72125 | 30.830 | 506 | 293 | 13 | 20 | 496 | 81 | 558 | 3.00e-65 | 221 |
MS.gene028767.t1 | AT4G21680 | 30.097 | 515 | 317 | 14 | 10 | 493 | 70 | 572 | 5.61e-64 | 218 |
MS.gene028767.t1 | AT1G72130 | 30.143 | 491 | 291 | 8 | 20 | 493 | 77 | 532 | 8.74e-63 | 214 |
MS.gene028767.t1 | AT1G32450 | 30.118 | 508 | 326 | 13 | 10 | 492 | 79 | 582 | 9.38e-63 | 215 |
MS.gene028767.t1 | AT1G22570 | 30.533 | 488 | 293 | 10 | 10 | 472 | 35 | 501 | 2.02e-62 | 213 |
MS.gene028767.t1 | AT1G22570 | 30.533 | 488 | 293 | 10 | 10 | 472 | 72 | 538 | 5.58e-62 | 212 |
MS.gene028767.t1 | AT1G22540 | 31.388 | 497 | 287 | 11 | 20 | 491 | 82 | 549 | 1.07e-61 | 211 |
MS.gene028767.t1 | AT1G72140 | 28.820 | 517 | 296 | 14 | 11 | 495 | 77 | 553 | 1.13e-61 | 211 |
MS.gene028767.t1 | AT1G72120 | 30.417 | 503 | 295 | 11 | 20 | 496 | 81 | 554 | 2.01e-61 | 211 |
MS.gene028767.t1 | AT3G25260 | 28.884 | 502 | 298 | 6 | 5 | 491 | 58 | 515 | 2.01e-60 | 207 |
MS.gene028767.t1 | AT1G22550 | 30.097 | 515 | 305 | 11 | 11 | 496 | 73 | 561 | 5.98e-60 | 207 |
MS.gene028767.t1 | AT5G46050 | 27.982 | 436 | 285 | 6 | 55 | 470 | 2 | 428 | 2.87e-59 | 202 |
MS.gene028767.t1 | AT5G62730 | 28.190 | 525 | 300 | 13 | 11 | 495 | 40 | 527 | 5.84e-57 | 198 |
MS.gene028767.t1 | AT1G72130 | 30.345 | 435 | 262 | 7 | 76 | 493 | 4 | 414 | 1.52e-56 | 194 |
MS.gene028767.t1 | AT1G72130 | 30.345 | 435 | 262 | 7 | 76 | 493 | 4 | 414 | 1.52e-56 | 194 |
MS.gene028767.t1 | AT5G62730 | 28.190 | 525 | 300 | 13 | 11 | 495 | 99 | 586 | 2.14e-56 | 197 |
MS.gene028767.t1 | AT5G13400 | 27.043 | 514 | 342 | 9 | 10 | 496 | 106 | 613 | 1.60e-53 | 191 |
MS.gene028767.t1 | AT5G14940 | 26.038 | 530 | 322 | 11 | 2 | 492 | 41 | 539 | 9.27e-52 | 184 |
MS.gene028767.t1 | AT3G25280 | 26.166 | 493 | 317 | 8 | 11 | 491 | 64 | 521 | 2.20e-47 | 172 |
MS.gene028767.t1 | AT3G01350 | 26.415 | 530 | 321 | 12 | 2 | 487 | 41 | 545 | 3.47e-44 | 164 |
MS.gene028767.t1 | AT5G11570 | 34.694 | 245 | 148 | 6 | 256 | 491 | 235 | 476 | 5.24e-36 | 140 |
MS.gene028767.t1 | AT5G11570 | 27.064 | 218 | 135 | 6 | 3 | 212 | 48 | 249 | 1.57e-18 | 88.6 |
MS.gene028767.t1 | AT2G38100 | 25.483 | 518 | 319 | 16 | 2 | 493 | 8 | 484 | 1.52e-32 | 130 |
MS.gene028767.t1 | AT2G02020 | 32.314 | 229 | 147 | 2 | 2 | 225 | 76 | 301 | 2.56e-32 | 130 |
MS.gene028767.t1 | AT2G02020 | 31.308 | 214 | 133 | 5 | 296 | 496 | 312 | 524 | 3.74e-25 | 108 |
MS.gene028767.t1 | AT2G38100 | 25.483 | 518 | 319 | 16 | 2 | 493 | 24 | 500 | 2.90e-32 | 129 |
MS.gene028767.t1 | AT2G38100 | 25.483 | 518 | 319 | 16 | 2 | 493 | 30 | 506 | 2.98e-32 | 129 |
Find 85 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTTGCTGATTCTTTCTT+TGG | 0.156371 | 2.3:-8469355 | MS.gene028767:CDS |
ATTTACATTGAGGATAATTT+TGG | 0.220109 | 2.3:-8463706 | MS.gene028767:CDS |
TTCACATTCTATGTTGCTTC+TGG | 0.223391 | 2.3:-8463748 | MS.gene028767:CDS |
CAATGATTTCAATGATTATA+GGG | 0.263516 | 2.3:-8460838 | MS.gene028767:CDS |
AACTTCTTGTGTTGCTTTGC+TGG | 0.267544 | 2.3:-8469311 | MS.gene028767:intron |
ATACTACTTTGGATTGCTAT+TGG | 0.276250 | 2.3:+8461259 | None:intergenic |
TATTTGGAATCCTACCATTA+TGG | 0.285220 | 2.3:-8461306 | MS.gene028767:CDS |
GCAATGATTTCAATGATTAT+AGG | 0.291636 | 2.3:-8460839 | MS.gene028767:CDS |
TTTGGTTGGTCTTTAGGATT+TGG | 0.298813 | 2.3:-8463688 | MS.gene028767:CDS |
GTCCTAATATCAATTGGTTT+TGG | 0.302104 | 2.3:-8463856 | MS.gene028767:CDS |
GATTCAAGGAAGCGCAGTTT+TGG | 0.316724 | 2.3:-8463593 | MS.gene028767:CDS |
CGTTTCACAGCAGCATCATT+AGG | 0.318965 | 2.3:-8463826 | MS.gene028767:CDS |
TAATTGAGCCATCTGATGTT+AGG | 0.319776 | 2.3:+8461383 | None:intergenic |
CAATTAGTGTTGGTTGGTAT+TGG | 0.327167 | 2.3:-8460938 | MS.gene028767:CDS |
GCTTCTGGAGTTGCATTAAC+TGG | 0.329731 | 2.3:-8463733 | MS.gene028767:CDS |
CACCAAAACCAATTGATATT+AGG | 0.344369 | 2.3:+8463854 | None:intergenic |
TTAGTCATGGACCGTTCATT+AGG | 0.358432 | 2.3:-8461220 | MS.gene028767:CDS |
TATTGGATGTTAGTAGTGTT+TGG | 0.372864 | 2.3:-8460719 | MS.gene028767:CDS |
GGACATGTGTTGACTGTTCT+TGG | 0.383903 | 2.3:-8461049 | MS.gene028767:CDS |
TTCCCATGATTTATGTCATC+AGG | 0.398515 | 2.3:+8460755 | None:intergenic |
AGCATAGTCCTAATATCAAT+TGG | 0.421222 | 2.3:-8463862 | MS.gene028767:CDS |
ACGTTTCAATGTCTGTGTTA+TGG | 0.425106 | 2.3:-8460970 | MS.gene028767:CDS |
TGTTGGTGGTTTGCATGTGA+TGG | 0.432040 | 2.3:+8463912 | None:intergenic |
GAAGTACTGTCATACTACTT+TGG | 0.436363 | 2.3:+8461248 | None:intergenic |
TACTAATGGTGATGATGTTA+TGG | 0.447454 | 2.3:-8463494 | MS.gene028767:CDS |
AATATACTTGAACTCCATAA+TGG | 0.450457 | 2.3:+8461292 | None:intergenic |
CCAGGTTGGCATAAGATAAC+CGG | 0.450885 | 2.3:-8461106 | MS.gene028767:CDS |
TATCGAGCTGAAAAGATTCA+AGG | 0.453900 | 2.3:-8463607 | MS.gene028767:CDS |
AGCAAGGATTGGTAATAGAT+TGG | 0.456555 | 2.3:+8469381 | None:intergenic |
CCTATGCCACTCCAACGAAT+AGG | 0.457806 | 2.3:-8461076 | MS.gene028767:CDS |
CTTGACAGAGTGCTATTGCC+AGG | 0.463548 | 2.3:-8461124 | MS.gene028767:CDS |
GAGGATTACTATACTACTAA+TGG | 0.465881 | 2.3:-8463508 | MS.gene028767:CDS |
CCGGTTATCTTATGCCAACC+TGG | 0.473273 | 2.3:+8461106 | None:intergenic |
AATCAGTACTCCTACGAACT+TGG | 0.476238 | 2.3:+8460783 | None:intergenic |
ATCACATGCAAACCACCAAC+AGG | 0.477029 | 2.3:-8463910 | MS.gene028767:CDS |
GGAAGGTAGATAACGTGTAT+TGG | 0.480484 | 2.3:-8460736 | MS.gene028767:CDS |
TTTCCACAATTAGTGTTGGT+TGG | 0.482453 | 2.3:-8460944 | MS.gene028767:CDS |
GTCAAGAAATGTGAGGAAAA+CGG | 0.486676 | 2.3:+8461141 | None:intergenic |
CAGATTGTAAACGTTGTTGT+TGG | 0.491310 | 2.3:-8469409 | MS.gene028767:CDS |
TTACCTGATGACATAAATCA+TGG | 0.494319 | 2.3:-8460758 | MS.gene028767:CDS |
ATGCTGCCTCCGGCAACACT+AGG | 0.507305 | 2.3:-8463466 | MS.gene028767:CDS |
TAATAGAATGTAACTTGTCC+AGG | 0.509085 | 2.3:+8460899 | None:intergenic |
GTGTATTGGATTCCTGTTGG+TGG | 0.510536 | 2.3:+8463898 | None:intergenic |
AACAATTTCCACAATCACTT+AGG | 0.511803 | 2.3:-8460874 | MS.gene028767:CDS |
AACTGGAGTTATTTACATTG+AGG | 0.512404 | 2.3:-8463716 | MS.gene028767:CDS |
TTATGTATAGAACTGTGTAT+TGG | 0.516541 | 2.3:+8463884 | None:intergenic |
GCAAGGATTGCAGCAAGGAT+TGG | 0.516833 | 2.3:+8469370 | None:intergenic |
TTGTTGCATCTGTTCGTAAG+TGG | 0.518784 | 2.3:-8463555 | MS.gene028767:CDS |
TGTGTTGACTGTTCTTGGCA+TGG | 0.519665 | 2.3:-8461044 | MS.gene028767:CDS |
CCCCATTTCAAAATCCCAGC+TGG | 0.522206 | 2.3:-8461196 | MS.gene028767:CDS |
CCTATTCGTTGGAGTGGCAT+AGG | 0.527703 | 2.3:+8461076 | None:intergenic |
ACAGAGTGCTATTGCCAGGT+TGG | 0.530502 | 2.3:-8461120 | MS.gene028767:CDS |
GAACCATTGTTGCATGGATG+AGG | 0.533231 | 2.3:+8463937 | None:intergenic |
GTTGTTTCCACAATTAGTGT+TGG | 0.534629 | 2.3:-8460948 | MS.gene028767:CDS |
ATACCAACCAACACTAATTG+TGG | 0.537554 | 2.3:+8460941 | None:intergenic |
AGCAACACAAGAAGTTGTAA+AGG | 0.540624 | 2.3:+8469318 | None:intergenic |
TGGATGTTAGTAGTGTTTGG+AGG | 0.546478 | 2.3:-8460716 | MS.gene028767:CDS |
AGGATTTGGTATATGTGCTG+TGG | 0.554014 | 2.3:-8463674 | MS.gene028767:CDS |
AAGTTCGTAGGAGTACTGAT+TGG | 0.558833 | 2.3:-8460781 | MS.gene028767:CDS |
ATAACAAGAACAGAACCAGC+TGG | 0.562257 | 2.3:+8461181 | None:intergenic |
AGTACTTCAAGCTTTAGTCA+TGG | 0.576763 | 2.3:-8461233 | MS.gene028767:CDS |
GCTCAATTAAGAAATCATCA+TGG | 0.583632 | 2.3:-8461369 | MS.gene028767:CDS |
CTTTAATCGACCAAGTTCGT+AGG | 0.592440 | 2.3:-8460793 | MS.gene028767:CDS |
CATGTCCTACTCCTATTCGT+TGG | 0.597266 | 2.3:+8461065 | None:intergenic |
ACTGTGTATTGGATTCCTGT+TGG | 0.598606 | 2.3:+8463895 | None:intergenic |
TGAAATGGGGTCCTAATGAA+CGG | 0.600830 | 2.3:+8461209 | None:intergenic |
GATGCAGACCTAACATCAGA+TGG | 0.601698 | 2.3:-8461391 | MS.gene028767:CDS |
TAACAAGAACAGAACCAGCT+GGG | 0.609552 | 2.3:+8461182 | None:intergenic |
CAAGCTGTCATCTAGAGTTG+AGG | 0.612464 | 2.3:-8463527 | MS.gene028767:CDS |
AGGTGAAGTGCAACAATGGA+TGG | 0.612637 | 2.3:-8470076 | None:intergenic |
TTTGACAAACCAGAACATCA+AGG | 0.615786 | 2.3:-8463793 | MS.gene028767:CDS |
TATGGTTGAAATGCTGCCTC+CGG | 0.620140 | 2.3:-8463476 | MS.gene028767:CDS |
AGCCAAAGAAAGAATCAGCA+AGG | 0.624435 | 2.3:+8469353 | None:intergenic |
TACCTGATGACATAAATCAT+GGG | 0.628382 | 2.3:-8460757 | MS.gene028767:CDS |
AAGCCTCATCCATGCAACAA+TGG | 0.631582 | 2.3:-8463940 | MS.gene028767:CDS |
CCTACTCCTATTCGTTGGAG+TGG | 0.633700 | 2.3:+8461070 | None:intergenic |
TACTTGAACTCCATAATGGT+AGG | 0.635294 | 2.3:+8461296 | None:intergenic |
CCACTCCAACGAATAGGAGT+AGG | 0.637547 | 2.3:-8461070 | MS.gene028767:CDS |
TGATGACATAAATCATGGGA+AGG | 0.641240 | 2.3:-8460753 | MS.gene028767:CDS |
AATCAGCAAGGATTGCAGCA+AGG | 0.644562 | 2.3:+8469365 | None:intergenic |
ATGGATGAACCATTGTTGCA+TGG | 0.645373 | 2.3:+8463931 | None:intergenic |
GCTATGCACAGTTCAACAAG+TGG | 0.662074 | 2.3:-8461344 | MS.gene028767:CDS |
CATCAGTTATCAGAGCTGCA+CGG | 0.676552 | 2.3:+8461410 | None:intergenic |
GCACTCTGTCAAGAAATGTG+AGG | 0.684494 | 2.3:+8461134 | None:intergenic |
GATGTGCTCCTAAGTGATTG+TGG | 0.694012 | 2.3:+8460866 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 8460658 | 8470083 | 8460658 | ID=MS.gene028767 |
chr2.3 | mRNA | 8460658 | 8470083 | 8460658 | ID=MS.gene028767.t1;Parent=MS.gene028767 |
chr2.3 | exon | 8470077 | 8470083 | 8470077 | ID=MS.gene028767.t1.exon1;Parent=MS.gene028767.t1 |
chr2.3 | CDS | 8470077 | 8470083 | 8470077 | ID=cds.MS.gene028767.t1;Parent=MS.gene028767.t1 |
chr2.3 | exon | 8469312 | 8469460 | 8469312 | ID=MS.gene028767.t1.exon2;Parent=MS.gene028767.t1 |
chr2.3 | CDS | 8469312 | 8469460 | 8469312 | ID=cds.MS.gene028767.t1;Parent=MS.gene028767.t1 |
chr2.3 | exon | 8463454 | 8464004 | 8463454 | ID=MS.gene028767.t1.exon3;Parent=MS.gene028767.t1 |
chr2.3 | CDS | 8463454 | 8464004 | 8463454 | ID=cds.MS.gene028767.t1;Parent=MS.gene028767.t1 |
chr2.3 | exon | 8460658 | 8461441 | 8460658 | ID=MS.gene028767.t1.exon4;Parent=MS.gene028767.t1 |
chr2.3 | CDS | 8460658 | 8461441 | 8460658 | ID=cds.MS.gene028767.t1;Parent=MS.gene028767.t1 |
Gene Sequence |
Protein sequence |