Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93924.t1 | RHN59575.1 | 94.6 | 557 | 30 | 0 | 1 | 557 | 1 | 557 | 5.20E-305 | 1056.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93924.t1 | Q0WP01 | 63.5 | 554 | 190 | 2 | 10 | 556 | 9 | 557 | 1.6e-201 | 703.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93924.t1 | A0A396I7E7 | 94.6 | 557 | 30 | 0 | 1 | 557 | 1 | 557 | 3.8e-305 | 1056.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049259 | MS.gene93924 | 0.801492 | 8.78E-49 | -1.69E-46 |
MS.gene049611 | MS.gene93924 | 0.838206 | 3.30E-57 | -1.69E-46 |
MS.gene049634 | MS.gene93924 | 0.827565 | 1.46E-54 | -1.69E-46 |
MS.gene050165 | MS.gene93924 | -0.801387 | 9.22E-49 | -1.69E-46 |
MS.gene050333 | MS.gene93924 | -0.803481 | 3.42E-49 | -1.69E-46 |
MS.gene050381 | MS.gene93924 | 0.823027 | 1.73E-53 | -1.69E-46 |
MS.gene050444 | MS.gene93924 | -0.801367 | 9.31E-49 | -1.69E-46 |
MS.gene050496 | MS.gene93924 | -0.816427 | 5.56E-52 | -1.69E-46 |
MS.gene050504 | MS.gene93924 | -0.822611 | 2.16E-53 | -1.69E-46 |
MS.gene050612 | MS.gene93924 | -0.829734 | 4.36E-55 | -1.69E-46 |
MS.gene050675 | MS.gene93924 | -0.82769 | 1.36E-54 | -1.69E-46 |
MS.gene05079 | MS.gene93924 | 0.828697 | 7.79E-55 | -1.69E-46 |
MS.gene050868 | MS.gene93924 | -0.815479 | 9.05E-52 | -1.69E-46 |
MS.gene050871 | MS.gene93924 | -0.815115 | 1.09E-51 | -1.69E-46 |
MS.gene051044 | MS.gene93924 | 0.848557 | 5.68E-60 | -1.69E-46 |
MS.gene05104 | MS.gene93924 | 0.841724 | 3.99E-58 | -1.69E-46 |
MS.gene051127 | MS.gene93924 | 0.801831 | 7.48E-49 | -1.69E-46 |
MS.gene051138 | MS.gene93924 | 0.85418 | 1.46E-61 | -1.69E-46 |
MS.gene051366 | MS.gene93924 | 0.80091 | 1.15E-48 | -1.69E-46 |
MS.gene052805 | MS.gene93924 | 0.831026 | 2.11E-55 | -1.69E-46 |
MS.gene053420 | MS.gene93924 | 0.842479 | 2.52E-58 | -1.69E-46 |
MS.gene053488 | MS.gene93924 | 0.80429 | 2.32E-49 | -1.69E-46 |
MS.gene053561 | MS.gene93924 | 0.8052 | 1.50E-49 | -1.69E-46 |
MS.gene055154 | MS.gene93924 | 0.811887 | 5.59E-51 | -1.69E-46 |
MS.gene055502 | MS.gene93924 | -0.809155 | 2.18E-50 | -1.69E-46 |
MS.gene055577 | MS.gene93924 | -0.807262 | 5.51E-50 | -1.69E-46 |
MS.gene055751 | MS.gene93924 | -0.803577 | 3.26E-49 | -1.69E-46 |
MS.gene055942 | MS.gene93924 | 0.849071 | 4.09E-60 | -1.69E-46 |
MS.gene056198 | MS.gene93924 | 0.805466 | 1.32E-49 | -1.69E-46 |
MS.gene056224 | MS.gene93924 | 0.81323 | 2.84E-51 | -1.69E-46 |
MS.gene056504 | MS.gene93924 | -0.80379 | 2.95E-49 | -1.69E-46 |
MS.gene056856 | MS.gene93924 | 0.847724 | 9.65E-60 | -1.69E-46 |
MS.gene056857 | MS.gene93924 | 0.81524 | 1.02E-51 | -1.69E-46 |
MS.gene058068 | MS.gene93924 | 0.818241 | 2.17E-52 | -1.69E-46 |
MS.gene058099 | MS.gene93924 | 0.824811 | 6.59E-54 | -1.69E-46 |
MS.gene058117 | MS.gene93924 | 0.82463 | 7.28E-54 | -1.69E-46 |
MS.gene058171 | MS.gene93924 | 0.80643 | 8.26E-50 | -1.69E-46 |
MS.gene058175 | MS.gene93924 | 0.808891 | 2.48E-50 | -1.69E-46 |
MS.gene058268 | MS.gene93924 | 0.830423 | 2.96E-55 | -1.69E-46 |
MS.gene058269 | MS.gene93924 | 0.810308 | 1.23E-50 | -1.69E-46 |
MS.gene058603 | MS.gene93924 | 0.820866 | 5.47E-53 | -1.69E-46 |
MS.gene059022 | MS.gene93924 | -0.819143 | 1.36E-52 | -1.69E-46 |
MS.gene059677 | MS.gene93924 | -0.801073 | 1.07E-48 | -1.69E-46 |
MS.gene059701 | MS.gene93924 | 0.802518 | 5.40E-49 | -1.69E-46 |
MS.gene059703 | MS.gene93924 | 0.805662 | 1.20E-49 | -1.69E-46 |
MS.gene059865 | MS.gene93924 | -0.821991 | 3.01E-53 | -1.69E-46 |
MS.gene060405 | MS.gene93924 | 0.801642 | 8.18E-49 | -1.69E-46 |
MS.gene060762 | MS.gene93924 | -0.807374 | 5.22E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93924.t1 | MTR_4g033315 | 90.664 | 557 | 52 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1023 |
MS.gene93924.t1 | MTR_4g033310 | 90.664 | 557 | 52 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1023 |
MS.gene93924.t1 | MTR_4g033330 | 94.934 | 533 | 27 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1009 |
MS.gene93924.t1 | MTR_0294s0020 | 87.792 | 557 | 66 | 1 | 1 | 557 | 1 | 555 | 0.0 | 981 |
MS.gene93924.t1 | MTR_4g033325 | 86.559 | 558 | 71 | 2 | 1 | 557 | 1 | 555 | 0.0 | 979 |
MS.gene93924.t1 | MTR_4g033395 | 85.341 | 498 | 71 | 2 | 1 | 496 | 1 | 498 | 0.0 | 880 |
MS.gene93924.t1 | MTR_4g033375 | 85.141 | 498 | 72 | 2 | 1 | 496 | 1 | 498 | 0.0 | 872 |
MS.gene93924.t1 | MTR_4g033325 | 86.005 | 443 | 58 | 2 | 116 | 557 | 18 | 457 | 0.0 | 789 |
MS.gene93924.t1 | MTR_4g033385 | 84.650 | 443 | 67 | 1 | 116 | 557 | 16 | 458 | 0.0 | 787 |
MS.gene93924.t1 | MTR_4g033325 | 85.714 | 434 | 58 | 2 | 125 | 557 | 1 | 431 | 0.0 | 772 |
MS.gene93924.t1 | MTR_3g005010 | 66.789 | 545 | 170 | 4 | 13 | 555 | 12 | 547 | 0.0 | 719 |
MS.gene93924.t1 | MTR_4g033310 | 89.474 | 304 | 32 | 0 | 254 | 557 | 190 | 493 | 0.0 | 569 |
MS.gene93924.t1 | MTR_4g033310 | 91.146 | 192 | 17 | 0 | 1 | 192 | 1 | 192 | 4.04e-111 | 340 |
MS.gene93924.t1 | MTR_8g038880 | 47.145 | 543 | 255 | 8 | 30 | 551 | 19 | 550 | 5.40e-162 | 473 |
MS.gene93924.t1 | MTR_3g014790 | 43.993 | 566 | 277 | 12 | 17 | 557 | 5 | 555 | 1.13e-157 | 462 |
MS.gene93924.t1 | MTR_7g067010 | 40.603 | 564 | 310 | 6 | 8 | 550 | 1 | 560 | 1.69e-154 | 454 |
MS.gene93924.t1 | MTR_7g098200 | 41.103 | 562 | 307 | 6 | 17 | 557 | 15 | 573 | 4.77e-154 | 454 |
MS.gene93924.t1 | MTR_7g098200 | 40.975 | 554 | 309 | 5 | 17 | 557 | 15 | 563 | 1.95e-153 | 452 |
MS.gene93924.t1 | MTR_3g072300 | 40.860 | 558 | 309 | 7 | 17 | 555 | 10 | 565 | 1.49e-151 | 447 |
MS.gene93924.t1 | MTR_7g098180 | 40.754 | 557 | 305 | 6 | 17 | 551 | 17 | 570 | 7.05e-151 | 446 |
MS.gene93924.t1 | MTR_4g015080 | 40.780 | 564 | 309 | 7 | 10 | 552 | 13 | 572 | 8.78e-151 | 445 |
MS.gene93924.t1 | MTR_1g042310 | 41.472 | 557 | 300 | 8 | 17 | 551 | 12 | 564 | 6.10e-149 | 441 |
MS.gene93924.t1 | MTR_3g462710 | 40.885 | 565 | 307 | 8 | 10 | 551 | 3 | 563 | 1.14e-147 | 437 |
MS.gene93924.t1 | MTR_3g069500 | 39.216 | 561 | 308 | 8 | 10 | 551 | 14 | 560 | 4.95e-147 | 436 |
MS.gene93924.t1 | MTR_3g069420 | 39.437 | 568 | 316 | 7 | 3 | 551 | 11 | 569 | 1.32e-146 | 435 |
MS.gene93924.t1 | MTR_4g019580 | 38.669 | 556 | 314 | 6 | 17 | 552 | 22 | 570 | 2.56e-146 | 434 |
MS.gene93924.t1 | MTR_3g069440 | 40.468 | 556 | 308 | 8 | 15 | 551 | 17 | 568 | 2.83e-146 | 434 |
MS.gene93924.t1 | MTR_1g041835 | 41.547 | 556 | 300 | 8 | 17 | 551 | 13 | 564 | 2.84e-145 | 431 |
MS.gene93924.t1 | MTR_7g065080 | 38.489 | 556 | 309 | 8 | 17 | 552 | 17 | 559 | 2.58e-142 | 424 |
MS.gene93924.t1 | MTR_7g098040 | 38.530 | 558 | 315 | 6 | 17 | 551 | 20 | 572 | 3.17e-141 | 422 |
MS.gene93924.t1 | MTR_7g098160 | 38.849 | 556 | 316 | 7 | 17 | 551 | 19 | 571 | 5.35e-141 | 421 |
MS.gene93924.t1 | MTR_1g041815 | 40.827 | 556 | 304 | 8 | 17 | 551 | 13 | 564 | 1.27e-140 | 419 |
MS.gene93924.t1 | MTR_1g075440 | 39.318 | 557 | 312 | 7 | 17 | 551 | 14 | 566 | 1.51e-140 | 419 |
MS.gene93924.t1 | MTR_7g098090 | 38.681 | 561 | 315 | 6 | 17 | 551 | 19 | 576 | 3.28e-139 | 416 |
MS.gene93924.t1 | MTR_1g042310 | 41.635 | 526 | 281 | 8 | 48 | 551 | 6 | 527 | 6.08e-139 | 414 |
MS.gene93924.t1 | MTR_1g042310 | 41.412 | 524 | 281 | 8 | 50 | 551 | 1 | 520 | 4.03e-137 | 409 |
MS.gene93924.t1 | MTR_1g041875 | 38.734 | 537 | 296 | 8 | 17 | 531 | 15 | 540 | 2.97e-134 | 403 |
MS.gene93924.t1 | MTR_7g098230 | 37.523 | 541 | 314 | 6 | 38 | 557 | 33 | 570 | 1.61e-132 | 399 |
MS.gene93924.t1 | MTR_7g098220 | 37.230 | 556 | 325 | 6 | 17 | 551 | 16 | 568 | 2.53e-129 | 390 |
MS.gene93924.t1 | MTR_1g041885 | 40.079 | 509 | 268 | 8 | 50 | 534 | 1 | 496 | 3.22e-127 | 383 |
MS.gene93924.t1 | MTR_5g055000 | 37.968 | 561 | 311 | 10 | 29 | 557 | 16 | 571 | 2.24e-125 | 380 |
MS.gene93924.t1 | MTR_5g012270 | 38.137 | 569 | 321 | 8 | 12 | 553 | 10 | 574 | 5.91e-125 | 379 |
MS.gene93924.t1 | MTR_4g101380 | 38.515 | 579 | 316 | 8 | 8 | 553 | 4 | 575 | 4.79e-124 | 377 |
MS.gene93924.t1 | MTR_3g112470 | 37.814 | 558 | 314 | 11 | 9 | 545 | 1 | 546 | 9.43e-124 | 375 |
MS.gene93924.t1 | MTR_3g112460 | 37.455 | 558 | 316 | 11 | 9 | 545 | 1 | 546 | 7.02e-123 | 373 |
MS.gene93924.t1 | MTR_5g012290 | 38.811 | 572 | 313 | 9 | 12 | 553 | 8 | 572 | 1.97e-121 | 370 |
MS.gene93924.t1 | MTR_7g088825 | 36.643 | 554 | 314 | 10 | 29 | 553 | 20 | 565 | 4.13e-118 | 362 |
MS.gene93924.t1 | MTR_6g008690 | 37.848 | 539 | 299 | 9 | 36 | 552 | 12 | 536 | 8.98e-118 | 359 |
MS.gene93924.t1 | MTR_7g098220 | 36.952 | 525 | 307 | 6 | 48 | 551 | 3 | 524 | 1.27e-117 | 359 |
MS.gene93924.t1 | MTR_7g010820 | 36.953 | 571 | 325 | 11 | 10 | 550 | 5 | 570 | 2.45e-116 | 357 |
MS.gene93924.t1 | MTR_7g088820 | 35.263 | 570 | 328 | 12 | 1 | 541 | 1 | 558 | 1.80e-115 | 355 |
MS.gene93924.t1 | MTR_7g065080 | 37.526 | 485 | 270 | 8 | 88 | 552 | 1 | 472 | 2.17e-115 | 351 |
MS.gene93924.t1 | MTR_7g088790 | 34.729 | 573 | 343 | 9 | 9 | 554 | 7 | 575 | 9.57e-113 | 348 |
MS.gene93924.t1 | MTR_7g005930 | 34.347 | 559 | 329 | 11 | 23 | 557 | 27 | 571 | 5.84e-112 | 345 |
MS.gene93924.t1 | MTR_7g098200 | 38.745 | 462 | 259 | 6 | 117 | 557 | 1 | 459 | 2.72e-111 | 340 |
MS.gene93924.t1 | MTR_7g098150 | 39.326 | 445 | 246 | 5 | 17 | 440 | 19 | 460 | 1.75e-110 | 338 |
MS.gene93924.t1 | MTR_3g112450 | 35.907 | 557 | 322 | 10 | 15 | 548 | 7 | 551 | 1.28e-109 | 339 |
MS.gene93924.t1 | MTR_4g114340 | 39.312 | 552 | 306 | 8 | 16 | 545 | 9 | 553 | 1.24e-108 | 337 |
MS.gene93924.t1 | MTR_5g014150 | 34.549 | 576 | 341 | 10 | 3 | 548 | 16 | 585 | 1.33e-108 | 337 |
MS.gene93924.t1 | MTR_3g462710 | 39.907 | 431 | 240 | 6 | 137 | 552 | 29 | 455 | 2.05e-107 | 330 |
MS.gene93924.t1 | MTR_5g038060 | 34.829 | 557 | 321 | 9 | 29 | 551 | 29 | 577 | 4.99e-107 | 333 |
MS.gene93924.t1 | MTR_4g098800 | 34.568 | 567 | 330 | 11 | 10 | 546 | 15 | 570 | 9.18e-107 | 332 |
MS.gene93924.t1 | MTR_4g098800 | 34.568 | 567 | 330 | 11 | 10 | 546 | 80 | 635 | 7.10e-106 | 332 |
MS.gene93924.t1 | MTR_4g107670 | 33.565 | 575 | 343 | 8 | 10 | 551 | 3 | 571 | 9.21e-105 | 327 |
MS.gene93924.t1 | MTR_1g116930 | 34.312 | 545 | 326 | 10 | 27 | 548 | 19 | 554 | 2.34e-104 | 326 |
MS.gene93924.t1 | MTR_7g088820 | 35.081 | 496 | 291 | 9 | 73 | 541 | 5 | 496 | 2.12e-103 | 322 |
MS.gene93924.t1 | MTR_5g038380 | 33.564 | 578 | 344 | 9 | 11 | 555 | 8 | 578 | 3.08e-103 | 323 |
MS.gene93924.t1 | MTR_2g017750 | 32.826 | 591 | 358 | 10 | 2 | 555 | 4 | 592 | 1.40e-102 | 322 |
MS.gene93924.t1 | MTR_4g107510 | 35.219 | 548 | 323 | 9 | 35 | 552 | 40 | 585 | 2.63e-102 | 321 |
MS.gene93924.t1 | MTR_8g469480 | 34.489 | 548 | 323 | 8 | 35 | 551 | 42 | 584 | 2.26e-100 | 316 |
MS.gene93924.t1 | MTR_8g469310 | 34.501 | 571 | 333 | 8 | 18 | 555 | 13 | 575 | 2.69e-100 | 315 |
MS.gene93924.t1 | MTR_7g013270 | 32.807 | 570 | 333 | 12 | 12 | 548 | 71 | 623 | 3.55e-100 | 317 |
MS.gene93924.t1 | MTR_2g005130 | 34.347 | 559 | 336 | 9 | 10 | 551 | 19 | 563 | 1.34e-99 | 313 |
MS.gene93924.t1 | MTR_3g100980 | 34.000 | 550 | 331 | 9 | 25 | 551 | 10 | 550 | 2.27e-99 | 312 |
MS.gene93924.t1 | MTR_5g085850 | 36.201 | 558 | 316 | 9 | 17 | 551 | 16 | 556 | 1.66e-97 | 308 |
MS.gene93924.t1 | MTR_8g087780 | 33.739 | 575 | 344 | 11 | 15 | 554 | 5 | 577 | 3.42e-97 | 307 |
MS.gene93924.t1 | MTR_4g107580 | 34.186 | 547 | 327 | 10 | 35 | 550 | 28 | 572 | 3.84e-97 | 307 |
MS.gene93924.t1 | MTR_8g469470 | 32.801 | 564 | 336 | 9 | 23 | 550 | 24 | 580 | 4.53e-97 | 307 |
MS.gene93924.t1 | MTR_7g006540 | 32.675 | 557 | 332 | 10 | 30 | 550 | 62 | 611 | 7.59e-97 | 308 |
MS.gene93924.t1 | MTR_8g103233 | 33.212 | 551 | 337 | 11 | 23 | 548 | 9 | 553 | 2.25e-95 | 302 |
MS.gene93924.t1 | MTR_8g087810 | 34.715 | 579 | 338 | 13 | 15 | 556 | 5 | 580 | 7.06e-94 | 298 |
MS.gene93924.t1 | MTR_1g026750 | 33.215 | 563 | 337 | 11 | 16 | 548 | 1 | 554 | 7.92e-94 | 298 |
MS.gene93924.t1 | MTR_4g123537 | 33.394 | 551 | 338 | 11 | 21 | 552 | 31 | 571 | 1.21e-93 | 299 |
MS.gene93924.t1 | MTR_3g100980 | 32.526 | 578 | 330 | 11 | 25 | 551 | 10 | 578 | 1.87e-93 | 298 |
MS.gene93924.t1 | MTR_4g107530 | 33.105 | 583 | 347 | 12 | 6 | 557 | 17 | 587 | 1.51e-92 | 296 |
MS.gene93924.t1 | MTR_1g009200 | 32.281 | 570 | 346 | 11 | 4 | 548 | 10 | 564 | 2.50e-92 | 295 |
MS.gene93924.t1 | MTR_1g026770 | 32.847 | 548 | 334 | 9 | 27 | 548 | 11 | 550 | 4.41e-92 | 293 |
MS.gene93924.t1 | MTR_5g038190 | 30.838 | 561 | 348 | 8 | 23 | 551 | 16 | 568 | 8.04e-92 | 293 |
MS.gene93924.t1 | MTR_1g026740 | 32.264 | 561 | 344 | 12 | 16 | 548 | 1 | 553 | 9.23e-92 | 293 |
MS.gene93924.t1 | MTR_4g107610 | 31.892 | 555 | 343 | 8 | 27 | 553 | 27 | 574 | 3.69e-90 | 290 |
MS.gene93924.t1 | MTR_7g088820 | 33.853 | 449 | 266 | 9 | 120 | 541 | 4 | 448 | 2.20e-88 | 281 |
MS.gene93924.t1 | MTR_1g085090 | 31.475 | 556 | 352 | 11 | 17 | 553 | 3 | 548 | 4.12e-88 | 284 |
MS.gene93924.t1 | MTR_2g101650 | 31.285 | 537 | 335 | 10 | 40 | 548 | 33 | 563 | 1.34e-87 | 282 |
MS.gene93924.t1 | MTR_7g111260 | 32.472 | 542 | 339 | 10 | 29 | 553 | 17 | 548 | 3.76e-87 | 281 |
MS.gene93924.t1 | MTR_4g011280 | 32.305 | 551 | 340 | 11 | 25 | 550 | 27 | 569 | 3.89e-87 | 281 |
MS.gene93924.t1 | MTR_2g101590 | 32.984 | 573 | 341 | 16 | 10 | 550 | 4 | 565 | 1.55e-86 | 281 |
MS.gene93924.t1 | MTR_7g064780 | 29.912 | 565 | 356 | 9 | 17 | 549 | 12 | 568 | 2.27e-85 | 276 |
MS.gene93924.t1 | MTR_2g101610 | 31.130 | 575 | 350 | 15 | 10 | 550 | 4 | 566 | 8.04e-85 | 276 |
MS.gene93924.t1 | MTR_2g101640 | 29.930 | 568 | 360 | 12 | 10 | 548 | 4 | 562 | 8.93e-82 | 268 |
MS.gene93924.t1 | MTR_1g057460 | 31.191 | 529 | 329 | 13 | 40 | 550 | 53 | 564 | 1.74e-80 | 263 |
MS.gene93924.t1 | MTR_7g098210 | 31.862 | 521 | 265 | 10 | 50 | 555 | 1 | 446 | 3.46e-80 | 259 |
MS.gene93924.t1 | MTR_2g101560 | 30.594 | 572 | 357 | 14 | 10 | 550 | 4 | 566 | 6.85e-78 | 258 |
MS.gene93924.t1 | MTR_1g057460 | 30.980 | 510 | 317 | 13 | 59 | 550 | 1 | 493 | 1.47e-77 | 253 |
MS.gene93924.t1 | MTR_7g064800 | 30.880 | 557 | 343 | 9 | 27 | 549 | 22 | 570 | 5.97e-77 | 254 |
MS.gene93924.t1 | MTR_4g024930 | 30.144 | 554 | 342 | 14 | 17 | 548 | 22 | 552 | 4.42e-75 | 249 |
MS.gene93924.t1 | MTR_0236s0050 | 29.724 | 508 | 324 | 12 | 59 | 548 | 1 | 493 | 3.73e-73 | 242 |
MS.gene93924.t1 | MTR_2g093640 | 31.643 | 572 | 332 | 14 | 16 | 552 | 1 | 548 | 5.83e-72 | 240 |
MS.gene93924.t1 | MTR_2g093160 | 29.947 | 571 | 343 | 13 | 16 | 552 | 1 | 548 | 5.68e-70 | 234 |
MS.gene93924.t1 | MTR_2g093180 | 30.366 | 573 | 339 | 12 | 16 | 552 | 1 | 549 | 1.74e-67 | 228 |
MS.gene93924.t1 | MTR_7g051880 | 28.909 | 550 | 356 | 11 | 9 | 548 | 1 | 525 | 1.86e-65 | 222 |
MS.gene93924.t1 | MTR_7g051830 | 28.102 | 548 | 363 | 9 | 9 | 548 | 1 | 525 | 4.68e-62 | 213 |
MS.gene93924.t1 | MTR_7g052600 | 28.492 | 537 | 357 | 8 | 17 | 548 | 11 | 525 | 5.35e-62 | 213 |
MS.gene93924.t1 | MTR_4g033390 | 88.889 | 90 | 10 | 0 | 466 | 555 | 30 | 119 | 1.22e-51 | 173 |
MS.gene93924.t1 | MTR_1g009170 | 29.353 | 402 | 219 | 11 | 141 | 527 | 3 | 354 | 4.88e-46 | 166 |
MS.gene93924.t1 | MTR_3g065350 | 39.130 | 161 | 90 | 4 | 318 | 478 | 1 | 153 | 9.24e-30 | 115 |
MS.gene93924.t1 | MTR_7g064160 | 26.263 | 99 | 73 | 0 | 17 | 115 | 15 | 113 | 3.61e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93924.t1 | AT1G22540 | 63.538 | 554 | 190 | 2 | 10 | 556 | 9 | 557 | 0.0 | 688 |
MS.gene93924.t1 | AT1G72125 | 57.603 | 559 | 228 | 6 | 1 | 552 | 1 | 557 | 0.0 | 624 |
MS.gene93924.t1 | AT1G72120 | 57.679 | 560 | 222 | 8 | 1 | 552 | 1 | 553 | 0.0 | 613 |
MS.gene93924.t1 | AT1G72140 | 55.818 | 550 | 213 | 5 | 16 | 551 | 19 | 552 | 0.0 | 605 |
MS.gene93924.t1 | AT1G22550 | 55.245 | 572 | 222 | 7 | 1 | 552 | 3 | 560 | 0.0 | 601 |
MS.gene93924.t1 | AT1G22570 | 55.596 | 554 | 222 | 6 | 16 | 552 | 15 | 561 | 0.0 | 584 |
MS.gene93924.t1 | AT1G22570 | 55.303 | 528 | 212 | 6 | 42 | 552 | 4 | 524 | 0.0 | 551 |
MS.gene93924.t1 | AT1G72130 | 52.820 | 532 | 229 | 6 | 29 | 555 | 23 | 537 | 0.0 | 532 |
MS.gene93924.t1 | AT3G54450 | 44.015 | 543 | 274 | 7 | 29 | 551 | 10 | 542 | 2.62e-168 | 489 |
MS.gene93924.t1 | AT2G02040 | 40.559 | 572 | 312 | 9 | 1 | 548 | 11 | 578 | 4.59e-150 | 443 |
MS.gene93924.t1 | AT5G01180 | 40.323 | 558 | 307 | 7 | 17 | 552 | 11 | 564 | 1.21e-149 | 442 |
MS.gene93924.t1 | AT5G01180 | 40.323 | 558 | 307 | 7 | 17 | 552 | 11 | 564 | 1.21e-149 | 442 |
MS.gene93924.t1 | AT5G01180 | 40.323 | 558 | 307 | 7 | 17 | 552 | 11 | 564 | 1.21e-149 | 442 |
MS.gene93924.t1 | AT3G54140 | 40.071 | 564 | 311 | 8 | 10 | 550 | 3 | 562 | 3.31e-148 | 438 |
MS.gene93924.t1 | AT3G54140 | 40.071 | 564 | 311 | 8 | 10 | 550 | 3 | 562 | 3.31e-148 | 438 |
MS.gene93924.t1 | AT3G53960 | 40.415 | 579 | 308 | 10 | 3 | 551 | 2 | 573 | 1.25e-147 | 438 |
MS.gene93924.t1 | AT2G37900 | 41.270 | 567 | 291 | 11 | 10 | 551 | 17 | 566 | 9.88e-147 | 434 |
MS.gene93924.t1 | AT1G72130 | 51.288 | 427 | 187 | 5 | 133 | 555 | 10 | 419 | 2.35e-145 | 426 |
MS.gene93924.t1 | AT1G72130 | 51.288 | 427 | 187 | 5 | 133 | 555 | 10 | 419 | 2.35e-145 | 426 |
MS.gene93924.t1 | AT1G62200 | 40.399 | 552 | 290 | 7 | 17 | 541 | 38 | 577 | 7.95e-144 | 427 |
MS.gene93924.t1 | AT2G40460 | 39.502 | 562 | 319 | 6 | 11 | 556 | 4 | 560 | 5.63e-139 | 415 |
MS.gene93924.t1 | AT2G02020 | 40.072 | 559 | 294 | 10 | 3 | 550 | 14 | 542 | 1.10e-137 | 410 |
MS.gene93924.t1 | AT1G62200 | 38.554 | 581 | 289 | 8 | 17 | 541 | 38 | 606 | 1.66e-137 | 412 |
MS.gene93924.t1 | AT1G62200 | 38.554 | 581 | 289 | 8 | 17 | 541 | 52 | 620 | 2.19e-137 | 412 |
MS.gene93924.t1 | AT5G46050 | 38.640 | 559 | 320 | 6 | 17 | 555 | 13 | 568 | 1.73e-133 | 401 |
MS.gene93924.t1 | AT5G46040 | 38.505 | 535 | 306 | 5 | 17 | 531 | 13 | 544 | 3.90e-133 | 400 |
MS.gene93924.t1 | AT2G37900 | 41.551 | 503 | 252 | 11 | 74 | 551 | 2 | 487 | 3.08e-126 | 379 |
MS.gene93924.t1 | AT5G14940 | 39.042 | 543 | 299 | 10 | 29 | 548 | 5 | 538 | 2.99e-123 | 374 |
MS.gene93924.t1 | AT2G02020 | 38.351 | 558 | 284 | 11 | 3 | 550 | 14 | 521 | 4.23e-123 | 372 |
MS.gene93924.t1 | AT3G01350 | 38.333 | 540 | 305 | 9 | 33 | 546 | 9 | 546 | 1.08e-119 | 365 |
MS.gene93924.t1 | AT1G69870 | 37.545 | 554 | 309 | 10 | 28 | 551 | 48 | 594 | 1.00e-118 | 364 |
MS.gene93924.t1 | AT1G68570 | 38.930 | 542 | 296 | 7 | 40 | 551 | 32 | 568 | 3.07e-118 | 362 |
MS.gene93924.t1 | AT1G68570 | 38.920 | 537 | 293 | 7 | 45 | 551 | 7 | 538 | 6.03e-118 | 360 |
MS.gene93924.t1 | AT1G32450 | 34.501 | 571 | 337 | 8 | 10 | 548 | 16 | 581 | 3.31e-111 | 344 |
MS.gene93924.t1 | AT2G26690 | 37.545 | 554 | 312 | 9 | 16 | 545 | 9 | 552 | 3.03e-109 | 338 |
MS.gene93924.t1 | AT1G12110 | 34.880 | 582 | 331 | 11 | 3 | 553 | 7 | 571 | 3.16e-109 | 338 |
MS.gene93924.t1 | AT4G21680 | 35.938 | 576 | 334 | 13 | 5 | 550 | 2 | 572 | 8.88e-109 | 337 |
MS.gene93924.t1 | AT3G21670 | 36.964 | 560 | 312 | 11 | 17 | 551 | 15 | 558 | 1.40e-100 | 316 |
MS.gene93924.t1 | AT1G52190 | 34.007 | 544 | 317 | 10 | 40 | 548 | 30 | 566 | 1.78e-99 | 314 |
MS.gene93924.t1 | AT1G18880 | 34.414 | 555 | 315 | 12 | 35 | 551 | 23 | 566 | 2.14e-99 | 313 |
MS.gene93924.t1 | AT1G59740 | 33.979 | 568 | 337 | 11 | 17 | 557 | 27 | 583 | 2.43e-99 | 313 |
MS.gene93924.t1 | AT2G26690 | 36.812 | 527 | 299 | 9 | 43 | 545 | 3 | 519 | 9.58e-99 | 310 |
MS.gene93924.t1 | AT5G46050 | 37.199 | 457 | 264 | 6 | 119 | 555 | 3 | 456 | 9.83e-99 | 308 |
MS.gene93924.t1 | AT1G33440 | 34.843 | 574 | 336 | 10 | 7 | 555 | 14 | 574 | 1.50e-97 | 308 |
MS.gene93924.t1 | AT1G27040 | 32.810 | 573 | 357 | 9 | 6 | 557 | 2 | 567 | 5.51e-97 | 306 |
MS.gene93924.t1 | AT3G16180 | 33.871 | 558 | 327 | 12 | 25 | 548 | 16 | 565 | 8.34e-97 | 306 |
MS.gene93924.t1 | AT1G27040 | 33.096 | 562 | 348 | 9 | 17 | 557 | 9 | 563 | 1.55e-96 | 305 |
MS.gene93924.t1 | AT1G69850 | 32.027 | 587 | 357 | 10 | 9 | 557 | 3 | 585 | 5.99e-96 | 304 |
MS.gene93924.t1 | AT2G26690 | 36.434 | 516 | 294 | 9 | 54 | 545 | 2 | 507 | 4.13e-94 | 298 |
MS.gene93924.t1 | AT5G13400 | 31.794 | 563 | 350 | 8 | 20 | 551 | 52 | 611 | 7.86e-94 | 300 |
MS.gene93924.t1 | AT5G62730 | 31.217 | 567 | 361 | 9 | 1 | 551 | 32 | 585 | 2.91e-93 | 297 |
MS.gene93924.t1 | AT1G27080 | 33.577 | 548 | 320 | 10 | 33 | 551 | 16 | 548 | 1.01e-92 | 295 |
MS.gene93924.t1 | AT5G62680 | 32.482 | 548 | 337 | 9 | 35 | 551 | 47 | 592 | 2.38e-91 | 293 |
MS.gene93924.t1 | AT1G27040 | 33.396 | 536 | 329 | 9 | 43 | 557 | 7 | 535 | 1.08e-90 | 289 |
MS.gene93924.t1 | AT5G19640 | 32.169 | 544 | 320 | 13 | 32 | 548 | 60 | 581 | 1.27e-90 | 291 |
MS.gene93924.t1 | AT3G47960 | 32.423 | 549 | 334 | 11 | 35 | 551 | 65 | 608 | 2.05e-88 | 286 |
MS.gene93924.t1 | AT5G62730 | 31.262 | 531 | 342 | 8 | 37 | 551 | 3 | 526 | 1.09e-87 | 281 |
MS.gene93924.t1 | AT1G27080 | 33.719 | 519 | 300 | 11 | 62 | 551 | 3 | 506 | 2.31e-85 | 275 |
MS.gene93924.t1 | AT5G28470 | 31.115 | 556 | 342 | 13 | 28 | 553 | 14 | 558 | 1.28e-83 | 271 |
MS.gene93924.t1 | AT1G69860 | 32.904 | 544 | 324 | 13 | 35 | 552 | 22 | 550 | 1.49e-83 | 271 |
MS.gene93924.t1 | AT5G28470 | 30.935 | 556 | 341 | 14 | 28 | 553 | 14 | 556 | 5.62e-81 | 264 |
MS.gene93924.t1 | AT3G25280 | 31.903 | 536 | 332 | 10 | 21 | 548 | 11 | 521 | 4.31e-78 | 255 |
MS.gene93924.t1 | AT3G25260 | 31.743 | 545 | 333 | 12 | 12 | 548 | 2 | 515 | 7.62e-76 | 249 |
MS.gene93924.t1 | AT3G45680 | 31.349 | 571 | 334 | 14 | 11 | 552 | 2 | 543 | 8.42e-72 | 240 |
MS.gene93924.t1 | AT3G45650 | 29.391 | 558 | 351 | 12 | 17 | 552 | 8 | 544 | 2.51e-70 | 236 |
MS.gene93924.t1 | AT3G45710 | 30.521 | 557 | 320 | 12 | 31 | 552 | 21 | 545 | 3.83e-70 | 236 |
MS.gene93924.t1 | AT3G45700 | 30.182 | 550 | 326 | 12 | 30 | 552 | 15 | 533 | 4.23e-69 | 233 |
MS.gene93924.t1 | AT3G45660 | 30.651 | 522 | 309 | 12 | 58 | 552 | 48 | 543 | 1.67e-66 | 226 |
MS.gene93924.t1 | AT3G45660 | 30.651 | 522 | 309 | 12 | 58 | 552 | 48 | 543 | 1.67e-66 | 226 |
MS.gene93924.t1 | AT3G45660 | 30.651 | 522 | 309 | 12 | 58 | 552 | 69 | 564 | 4.16e-66 | 225 |
MS.gene93924.t1 | AT3G45650 | 28.082 | 584 | 351 | 13 | 17 | 552 | 8 | 570 | 7.53e-65 | 222 |
MS.gene93924.t1 | AT3G45720 | 30.769 | 520 | 303 | 14 | 40 | 530 | 28 | 519 | 7.17e-63 | 216 |
MS.gene93924.t1 | AT5G11570 | 27.255 | 521 | 301 | 12 | 40 | 548 | 22 | 476 | 1.56e-60 | 208 |
MS.gene93924.t1 | AT3G45690 | 28.785 | 535 | 296 | 15 | 30 | 540 | 17 | 490 | 4.98e-55 | 194 |
MS.gene93924.t1 | AT2G38100 | 28.269 | 520 | 308 | 17 | 59 | 550 | 2 | 484 | 5.50e-47 | 172 |
MS.gene93924.t1 | AT2G38100 | 28.516 | 519 | 308 | 16 | 59 | 550 | 18 | 500 | 1.06e-46 | 171 |
MS.gene93924.t1 | AT2G38100 | 28.269 | 520 | 308 | 17 | 59 | 550 | 24 | 506 | 1.86e-46 | 171 |
Find 120 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGCTTCAACTTTGGTTTA+TGG | 0.138154 | 4.3:-66823848 | MS.gene93924:CDS |
AACCTTGTGTTCAAGCTTTC+GGG | 0.149446 | 4.3:-66824806 | MS.gene93924:CDS |
TTCTAAGGTTGGTTCCAATT+TGG | 0.164932 | 4.3:-66823868 | MS.gene93924:CDS |
CTTCTAGCTGTGTGCTCTTT+AGG | 0.168298 | 4.3:+66824759 | None:intergenic |
CTAGAAGCTCATTCTTTAAT+TGG | 0.184688 | 4.3:-66824743 | MS.gene93924:CDS |
GCTACAAGTTTCATCTTCTT+TGG | 0.207090 | 4.3:+66823919 | None:intergenic |
GATAACATTAGTTGGGTTCT+TGG | 0.227701 | 4.3:-66824660 | MS.gene93924:CDS |
CCCATGCTTCTTAGTTCATT+TGG | 0.244157 | 4.3:+66823398 | None:intergenic |
GCTTCCCTCCTTCCTCTCTT+AGG | 0.246982 | 4.3:-66825951 | MS.gene93924:CDS |
TGCTTCTCTTATCTATATAT+TGG | 0.248624 | 4.3:-66825880 | MS.gene93924:intron |
CTTCGCTTCAAACGATAAAA+TGG | 0.249694 | 4.3:-66823736 | MS.gene93924:CDS |
ATTAGTTGGGTTCTTGGATT+TGG | 0.259493 | 4.3:-66824654 | MS.gene93924:CDS |
TCTAAGGTTGGTTCCAATTT+GGG | 0.262407 | 4.3:-66823867 | MS.gene93924:CDS |
GACATATAGGTTTAACATTA+AGG | 0.274752 | 4.3:-66824577 | MS.gene93924:CDS |
AAACCTTGTGTTCAAGCTTT+CGG | 0.280299 | 4.3:-66824807 | MS.gene93924:CDS |
TCCAATTTGGGCTTCAACTT+TGG | 0.295489 | 4.3:-66823855 | MS.gene93924:CDS |
CCATGCTTCTTAGTTCATTT+GGG | 0.297304 | 4.3:+66823399 | None:intergenic |
TTAGGTCCGAATCTGGTTAT+TGG | 0.299083 | 4.3:-66826477 | MS.gene93924:CDS |
AGGAAGGAGGGAAGCCGTTC+CGG | 0.306844 | 4.3:+66825959 | None:intergenic |
AAGAGTCCCTTTCTTAGAAT+TGG | 0.315382 | 4.3:-66824546 | MS.gene93924:CDS |
ACCAAAGTTGAAGCCCAAAT+TGG | 0.319490 | 4.3:+66823854 | None:intergenic |
CTCATTGGAACAGTTGCATT+TGG | 0.332167 | 4.3:+66823512 | None:intergenic |
CTGCTAAGAATGTCAATATT+TGG | 0.333018 | 4.3:-66825983 | MS.gene93924:CDS |
ACGAATATGTGCTCATAGAT+AGG | 0.336290 | 4.3:+66823692 | None:intergenic |
ATGGAGAGAACAATATTTCC+TGG | 0.340438 | 4.3:-66823776 | MS.gene93924:CDS |
GCACTCTATTTGAGTATTGT+TGG | 0.352342 | 4.3:-66823371 | MS.gene93924:CDS |
TCATCTTCTTTGGATCCCTT+TGG | 0.353258 | 4.3:+66823929 | None:intergenic |
CTCCATTGAAGTCCCTTGCT+TGG | 0.358040 | 4.3:+66823793 | None:intergenic |
TTGTTGCGGCTATAAGAAAT+TGG | 0.360335 | 4.3:-66824515 | MS.gene93924:CDS |
GCTCAATTAGCTATTGTTGA+TGG | 0.372190 | 4.3:-66826529 | MS.gene93924:CDS |
TTCAAAATCCGTCGTTGATA+AGG | 0.373915 | 4.3:+66824485 | None:intergenic |
GCGGAGAGGGTATCATATTA+TGG | 0.374011 | 4.3:-66826065 | MS.gene93924:CDS |
ATCACAATGCTTCAACGAAT+TGG | 0.388981 | 4.3:-66823632 | MS.gene93924:CDS |
CAACTGTTCCAATGAGTATA+TGG | 0.398189 | 4.3:-66823505 | MS.gene93924:CDS |
AGATCCGCTTGGTTTATCAT+AGG | 0.431139 | 4.3:-66826454 | MS.gene93924:intron |
GTGTTAGCAGTGCCTTGTTA+AGG | 0.431339 | 4.3:+66823951 | None:intergenic |
TGCTTGGAACAAGGACATAT+AGG | 0.439390 | 4.3:-66824590 | MS.gene93924:CDS |
CACAAAGGCACTACCACATA+AGG | 0.442991 | 4.3:-66823158 | None:intergenic |
CCCGCAGTTAGGTCCGAATC+TGG | 0.446760 | 4.3:-66826484 | MS.gene93924:CDS |
AACTTGATATCATATCTAAC+AGG | 0.448274 | 4.3:-66826032 | MS.gene93924:CDS |
ACAAAGGACAGCCCGCAGTT+AGG | 0.470650 | 4.3:-66826495 | MS.gene93924:CDS |
ATATACAAGATAACATTAGT+TGG | 0.471533 | 4.3:-66824668 | MS.gene93924:CDS |
ACTGAGGAGAACAATATGTA+AGG | 0.472580 | 4.3:+66824889 | None:intergenic |
GAAGCTCATTCTTTAATTGG+TGG | 0.474451 | 4.3:-66824740 | MS.gene93924:CDS |
GACACGACCAATTCTAAGAA+AGG | 0.479274 | 4.3:+66824539 | None:intergenic |
ACCAACCACCATATACTCAT+TGG | 0.479829 | 4.3:+66823497 | None:intergenic |
AGCTTCTAACAGCACTTCGT+TGG | 0.483350 | 4.3:+66826549 | None:intergenic |
AAGAAGCTAAGGCTGTTCTA+AGG | 0.485876 | 4.3:-66823883 | MS.gene93924:CDS |
AAGAATGTCAATATTTGGTC+CGG | 0.487098 | 4.3:-66825978 | MS.gene93924:CDS |
GGATCTCCAATAACCAGATT+CGG | 0.490538 | 4.3:+66826471 | None:intergenic |
GTATCATATTATGGAATTCA+AGG | 0.491184 | 4.3:-66826056 | MS.gene93924:CDS |
TATACAAGATAACATTAGTT+GGG | 0.492477 | 4.3:-66824667 | MS.gene93924:CDS |
TTTACATTCTTCACCAAGCA+AGG | 0.493614 | 4.3:-66823806 | MS.gene93924:CDS |
TAGCTTCTTCCACCTCACTA+AGG | 0.507911 | 4.3:+66823897 | None:intergenic |
AGCTAAGGCTGTTCTAAGGT+TGG | 0.516261 | 4.3:-66823879 | MS.gene93924:CDS |
CTTGCTGGATTAAGTGTGGT+GGG | 0.518167 | 4.3:-66823224 | MS.gene93924:CDS |
GTTGCAGTGCTTTGTTTGAG+TGG | 0.521993 | 4.3:+66826008 | None:intergenic |
ACACGACCAATTCTAAGAAA+GGG | 0.526584 | 4.3:+66824540 | None:intergenic |
GCAAAGATGATCGTGAAAGT+TGG | 0.529983 | 4.3:-66823295 | MS.gene93924:CDS |
TCACTCTATCTAGTTGCCAT+TGG | 0.531734 | 4.3:-66824843 | MS.gene93924:CDS |
AATCATTGGCTATCCTTATG+TGG | 0.535072 | 4.3:+66823145 | None:intergenic |
TAGTGAGGTGGAAGAAGCTA+AGG | 0.539918 | 4.3:-66823894 | MS.gene93924:CDS |
CCCAAATGAACTAAGAAGCA+TGG | 0.542573 | 4.3:-66823399 | MS.gene93924:CDS |
GAGGGAGGTATGTCAAATCC+AGG | 0.544553 | 4.3:+66823758 | None:intergenic |
CTGGTTATTGGAGATCCGCT+TGG | 0.544926 | 4.3:-66826465 | MS.gene93924:CDS |
CCTTGCTGGATTAAGTGTGG+TGG | 0.545190 | 4.3:-66823225 | MS.gene93924:CDS |
TATTTGAGTATTGTTGGTGT+TGG | 0.547399 | 4.3:-66823365 | MS.gene93924:CDS |
ATGCTTCAACGAATTGGCAC+TGG | 0.548210 | 4.3:-66823626 | MS.gene93924:CDS |
AATTGGTCGTGTCTTTGTTG+CGG | 0.548642 | 4.3:-66824529 | MS.gene93924:CDS |
CATTGGCAGCTTCCTTAACA+AGG | 0.549697 | 4.3:-66823963 | MS.gene93924:intron |
AAGGCACTGCTAACACCAAA+GGG | 0.549823 | 4.3:-66823944 | MS.gene93924:CDS |
CGAATATGTGCTCATAGATA+GGG | 0.550106 | 4.3:+66823693 | None:intergenic |
AGGTGTCGAAGTGGCGGAGA+GGG | 0.552102 | 4.3:-66826078 | MS.gene93924:CDS |
TCCAATGAGTATATGGTGGT+TGG | 0.556157 | 4.3:-66823498 | MS.gene93924:CDS |
CGAAAGCACCTAAGAGAGGA+AGG | 0.559132 | 4.3:+66825943 | None:intergenic |
GTTATCACCGGAAAACCCTC+AGG | 0.564479 | 4.3:-66823656 | MS.gene93924:CDS |
TTTATCGTTTGAAGCGAAGA+GGG | 0.565404 | 4.3:+66823740 | None:intergenic |
GCCCCGAAAGCTTGAACACA+AGG | 0.567096 | 4.3:+66824804 | None:intergenic |
AGCACCTAAGAGAGGAAGGA+GGG | 0.574375 | 4.3:+66825947 | None:intergenic |
CACCAAGCAAGGGACTTCAA+TGG | 0.574912 | 4.3:-66823795 | MS.gene93924:CDS |
GGTGTTGGAAGCTTTCTAAG+TGG | 0.575161 | 4.3:-66823350 | MS.gene93924:CDS |
GGAGAACAATATGTAAGGGA+AGG | 0.577683 | 4.3:+66824894 | None:intergenic |
TTTATGCCCACCTTGTCCAA+TGG | 0.578469 | 4.3:+66824827 | None:intergenic |
TGTCAATATTTGGTCCGGAA+CGG | 0.578632 | 4.3:-66825973 | MS.gene93924:CDS |
TTGTTTAGGTGTCGAAGTGG+CGG | 0.578707 | 4.3:-66826084 | MS.gene93924:intron |
CAAGGCACTGCTAACACCAA+AGG | 0.579228 | 4.3:-66823945 | MS.gene93924:CDS |
CCAAATGAACTAAGAAGCAT+GGG | 0.579849 | 4.3:-66823398 | MS.gene93924:CDS |
TATCTAGTTGCCATTGGACA+AGG | 0.587068 | 4.3:-66824837 | MS.gene93924:CDS |
TATCATATTATGGAATTCAA+GGG | 0.587902 | 4.3:-66826055 | MS.gene93924:CDS |
AACTTGTAGCCTTAGTGAGG+TGG | 0.589145 | 4.3:-66823906 | MS.gene93924:CDS |
CCGGTGATAACTCTTGCTAG+TGG | 0.591715 | 4.3:+66823668 | None:intergenic |
CCAGATTCGGACCTAACTGC+GGG | 0.591748 | 4.3:+66826484 | None:intergenic |
TAATACAATTTACAGGGACT+AGG | 0.592138 | 4.3:-66824942 | MS.gene93924:intron |
CTGAGGAGAACAATATGTAA+GGG | 0.592564 | 4.3:+66824890 | None:intergenic |
ACCTTGTGTTCAAGCTTTCG+GGG | 0.599219 | 4.3:-66824805 | MS.gene93924:CDS |
TGAAGCATTGTGATGCCTGA+GGG | 0.600479 | 4.3:+66823641 | None:intergenic |
TTACATTCTTCACCAAGCAA+GGG | 0.604573 | 4.3:-66823805 | MS.gene93924:CDS |
GCGATGATCATTACAACACA+AGG | 0.605088 | 4.3:+66824627 | None:intergenic |
AAGCACCTAAGAGAGGAAGG+AGG | 0.605702 | 4.3:+66825946 | None:intergenic |
GCAACGAAAGCACCTAAGAG+AGG | 0.607557 | 4.3:+66825939 | None:intergenic |
GAGAACAATATGTAAGGGAA+GGG | 0.609361 | 4.3:+66824895 | None:intergenic |
GTTCCTTGCTGGATTAAGTG+TGG | 0.609537 | 4.3:-66823228 | MS.gene93924:CDS |
TTGAAGCATTGTGATGCCTG+AGG | 0.610945 | 4.3:+66823640 | None:intergenic |
AATAAGATTACTTGTGACTG+AGG | 0.611966 | 4.3:+66824873 | None:intergenic |
CTAGTTGCCATTGGACAAGG+TGG | 0.620501 | 4.3:-66824834 | MS.gene93924:CDS |
GGGCTGTCCTTTGTAATCAA+CGG | 0.635317 | 4.3:+66826504 | None:intergenic |
ACCAGATTCGGACCTAACTG+CGG | 0.636959 | 4.3:+66826483 | None:intergenic |
CCACTAGCAAGAGTTATCAC+CGG | 0.641489 | 4.3:-66823668 | MS.gene93924:CDS |
ATCGTTTGAAGCGAAGAGGG+AGG | 0.642861 | 4.3:+66823743 | None:intergenic |
TGAAACTTGTAGCCTTAGTG+AGG | 0.657268 | 4.3:-66823909 | MS.gene93924:CDS |
TAGTTGCCATTGGACAAGGT+GGG | 0.664534 | 4.3:-66824833 | MS.gene93924:CDS |
CCACCACACTTAATCCAGCA+AGG | 0.665336 | 4.3:+66823225 | None:intergenic |
GATGGCGCCGTTGATTACAA+AGG | 0.673450 | 4.3:-66826511 | MS.gene93924:CDS |
TCATACATTTATAATCACAA+AGG | 0.673451 | 4.3:-66823173 | MS.gene93924:CDS |
TAGGTGTCGAAGTGGCGGAG+AGG | 0.678991 | 4.3:-66826079 | MS.gene93924:CDS |
GCGAAGTACCTTATCAACGA+CGG | 0.682131 | 4.3:-66824493 | MS.gene93924:CDS |
CGATGATCATTACAACACAA+GGG | 0.690961 | 4.3:+66824628 | None:intergenic |
TTGTGTTCAAGCTTTCGGGG+CGG | 0.695110 | 4.3:-66824802 | MS.gene93924:CDS |
TGTACCTATGATAAACCAAG+CGG | 0.704715 | 4.3:+66826450 | None:intergenic |
CTGTTCCAATGAGTATATGG+TGG | 0.715883 | 4.3:-66823502 | MS.gene93924:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTATGATATATTAAAAAAA+TGG | - | chr4.3:66824706-66824725 | MS.gene93924:CDS | 10.0% |
!!! | AAATGATTCTAAAATAATTT+TGG | + | chr4.3:66824394-66824413 | None:intergenic | 10.0% |
!!! | AATTTTTATATCAATATTCA+TGG | - | chr4.3:66826116-66826135 | MS.gene93924:intron | 10.0% |
!!! | TGTTTTTATCATAATAATTA+AGG | - | chr4.3:66823309-66823328 | MS.gene93924:CDS | 10.0% |
!! | AAAGAGATATAAAATTGATT+TGG | + | chr4.3:66823555-66823574 | None:intergenic | 15.0% |
!! | TTTATCATAATAATTAAGGT+TGG | - | chr4.3:66823313-66823332 | MS.gene93924:CDS | 15.0% |
!!! | TCAATTACTTTCTTTTTAAA+TGG | - | chr4.3:66823582-66823601 | MS.gene93924:CDS | 15.0% |
!! | ATATACAAGATAACATTAGT+TGG | - | chr4.3:66825051-66825070 | MS.gene93924:intron | 20.0% |
!! | TAAAGTAATTAACACTTAGA+AGG | + | chr4.3:66825422-66825441 | None:intergenic | 20.0% |
!! | TATACAAGATAACATTAGTT+GGG | - | chr4.3:66825052-66825071 | MS.gene93924:intron | 20.0% |
!! | TATCATATTATGGAATTCAA+GGG | - | chr4.3:66823664-66823683 | MS.gene93924:CDS | 20.0% |
!! | TCATACATTTATAATCACAA+AGG | - | chr4.3:66826546-66826565 | MS.gene93924:CDS | 20.0% |
!! | TGTTATGATCACAATATAAA+AGG | + | chr4.3:66825646-66825665 | None:intergenic | 20.0% |
!!! | AAAGAATTAATTTTGACTGA+TGG | + | chr4.3:66824052-66824071 | None:intergenic | 20.0% |
!!! | CACATTTTGATTACTTTTAT+TGG | - | chr4.3:66826469-66826488 | MS.gene93924:CDS | 20.0% |
!!! | CTTTCAGTGTTTTAATTTAT+TGG | + | chr4.3:66825702-66825721 | None:intergenic | 20.0% |
!!! | GAATTATGAATGTTTTGTTT+AGG | - | chr4.3:66823621-66823640 | MS.gene93924:CDS | 20.0% |
!!! | TCTTTGATAGAATATTTTAG+CGG | - | chr4.3:66826402-66826421 | MS.gene93924:intron | 20.0% |
!!! | TTCATTTTAGGAGAAATTTT+CGG | - | chr4.3:66823963-66823982 | MS.gene93924:intron | 20.0% |
!!! | TTTTTACACTCTAAAATGAA+TGG | - | chr4.3:66823899-66823918 | MS.gene93924:CDS | 20.0% |
! | AACTTGATATCATATCTAAC+AGG | - | chr4.3:66823687-66823706 | MS.gene93924:CDS | 25.0% |
! | AATTTGATTACAATACGTGT+TGG | - | chr4.3:66825617-66825636 | MS.gene93924:intron | 25.0% |
! | AGTAAAAAGTTTAGCTAGAT+AGG | + | chr4.3:66823493-66823512 | None:intergenic | 25.0% |
! | ATCTGCTTATTTCAATGTAT+TGG | - | chr4.3:66825502-66825521 | MS.gene93924:intron | 25.0% |
! | CATTATTAATGTTTCATCCT+AGG | - | chr4.3:66825544-66825563 | MS.gene93924:intron | 25.0% |
! | CTAAAATGAACCATTAACTA+TGG | + | chr4.3:66823953-66823972 | None:intergenic | 25.0% |
! | GACATATAGGTTTAACATTA+AGG | - | chr4.3:66825142-66825161 | MS.gene93924:intron | 25.0% |
! | GTAAAAAGTTTAGCTAGATA+GGG | + | chr4.3:66823492-66823511 | None:intergenic | 25.0% |
! | GTATCATATTATGGAATTCA+AGG | - | chr4.3:66823663-66823682 | MS.gene93924:CDS | 25.0% |
! | TGAGAGAAAGATTGATTATT+TGG | - | chr4.3:66825594-66825613 | MS.gene93924:intron | 25.0% |
! | TGCTTCTCTTATCTATATAT+TGG | - | chr4.3:66823839-66823858 | MS.gene93924:CDS | 25.0% |
! | TGTTATATATGTTAAACGTC+CGG | + | chr4.3:66824222-66824241 | None:intergenic | 25.0% |
! | TTGCACAAATAAATTCGAAA+TGG | + | chr4.3:66824620-66824639 | None:intergenic | 25.0% |
! | TTGGCTTAATACAATTTACA+GGG | - | chr4.3:66824771-66824790 | MS.gene93924:CDS | 25.0% |
!! | AATTTTTACGCCATAGTTAA+TGG | - | chr4.3:66823940-66823959 | MS.gene93924:CDS | 25.0% |
!! | ATTGGCTTAATACAATTTAC+AGG | - | chr4.3:66824770-66824789 | MS.gene93924:CDS | 25.0% |
!! | CATAGTTAATGGTTCATTTT+AGG | - | chr4.3:66823951-66823970 | MS.gene93924:CDS | 25.0% |
!! | TTATTGGAATTAGTTTGAGT+TGG | + | chr4.3:66825686-66825705 | None:intergenic | 25.0% |
!!! | ATATAGAGACACTTTTAGTT+TGG | - | chr4.3:66824318-66824337 | MS.gene93924:intron | 25.0% |
!!! | GAGATATAAAATTGATTTGG+TGG | + | chr4.3:66823552-66823571 | None:intergenic | 25.0% |
!!! | TCTTTTTGAACCTTTAGTTT+TGG | - | chr4.3:66823442-66823461 | MS.gene93924:CDS | 25.0% |
!!! | TTAGCTTGTAATTTCTACAT+TGG | - | chr4.3:66825739-66825758 | MS.gene93924:intron | 25.0% |
!!! | TTGGATGAGAACTTTTATTT+TGG | - | chr4.3:66823997-66824016 | MS.gene93924:intron | 25.0% |
!!! | TTTTAAATGGTGATGAGAAT+TGG | - | chr4.3:66823595-66823614 | MS.gene93924:CDS | 25.0% |
AAGAATGTCAATATTTGGTC+CGG | - | chr4.3:66823741-66823760 | MS.gene93924:CDS | 30.0% | |
AATAAGATTACTTGTGACTG+AGG | + | chr4.3:66824849-66824868 | None:intergenic | 30.0% | |
ACAGTGTTAAGATATGATGA+TGG | + | chr4.3:66824643-66824662 | None:intergenic | 30.0% | |
AGAAAGATTAGCAAAAACCA+TGG | + | chr4.3:66824669-66824688 | None:intergenic | 30.0% | |
CATAGTCAAACCAAAACTAA+AGG | + | chr4.3:66823455-66823474 | None:intergenic | 30.0% | |
CTAGAAGCTCATTCTTTAAT+TGG | - | chr4.3:66824976-66824995 | MS.gene93924:intron | 30.0% | |
CTGCTAAGAATGTCAATATT+TGG | - | chr4.3:66823736-66823755 | MS.gene93924:CDS | 30.0% | |
GAGAACTTTCTATGTAATTC+TGG | + | chr4.3:66824265-66824284 | None:intergenic | 30.0% | |
TAATACAATTTACAGGGACT+AGG | - | chr4.3:66824777-66824796 | MS.gene93924:CDS | 30.0% | |
! | TAGTCTTTTCATCTCAACAA+AGG | + | chr4.3:66826154-66826173 | None:intergenic | 30.0% |
! | TATTTGAGTATTGTTGGTGT+TGG | - | chr4.3:66826354-66826373 | MS.gene93924:intron | 30.0% |
! | TGGTATTTTACTATGATTGC+AGG | - | chr4.3:66824999-66825018 | MS.gene93924:intron | 30.0% |
!! | ACATTCTGAAAGTATCTTGA+AGG | - | chr4.3:66824510-66824529 | MS.gene93924:CDS | 30.0% |
!! | ACTCCAAACAAAAAGTATTG+AGG | + | chr4.3:66826249-66826268 | None:intergenic | 30.0% |
!! | ATAAAATTGATTTGGTGGCT+GGG | + | chr4.3:66823547-66823566 | None:intergenic | 30.0% |
!! | ATTCTGAAAGTATCTTGAAG+GGG | - | chr4.3:66824512-66824531 | MS.gene93924:CDS | 30.0% |
!! | CATTCTGAAAGTATCTTGAA+GGG | - | chr4.3:66824511-66824530 | MS.gene93924:CDS | 30.0% |
!! | GATTTTGAAGAAGAATGTGA+TGG | - | chr4.3:66825248-66825267 | MS.gene93924:intron | 30.0% |
!! | GTTCCTCAATACTTTTTGTT+TGG | - | chr4.3:66826243-66826262 | MS.gene93924:intron | 30.0% |
!! | TATAAAATTGATTTGGTGGC+TGG | + | chr4.3:66823548-66823567 | None:intergenic | 30.0% |
!!! | AGTTTCTGAGGTTTTTACTA+TGG | - | chr4.3:66826266-66826285 | MS.gene93924:intron | 30.0% |
!!! | GCTTTGATTGTTTTTTTGCT+TGG | - | chr4.3:66825113-66825132 | MS.gene93924:intron | 30.0% |
!!! | TTGTTTTTTTGCTTGGAACA+AGG | - | chr4.3:66825120-66825139 | MS.gene93924:intron | 30.0% |
AAACCTTGTGTTCAAGCTTT+CGG | - | chr4.3:66824912-66824931 | MS.gene93924:CDS | 35.0% | |
AAGAGTCCCTTTCTTAGAAT+TGG | - | chr4.3:66825173-66825192 | MS.gene93924:intron | 35.0% | |
ACGAATATGTGCTCATAGAT+AGG | + | chr4.3:66826030-66826049 | None:intergenic | 35.0% | |
ACTGAGGAGAACAATATGTA+AGG | + | chr4.3:66824833-66824852 | None:intergenic | 35.0% | |
ATCACAATGCTTCAACGAAT+TGG | - | chr4.3:66826087-66826106 | MS.gene93924:intron | 35.0% | |
ATGGAGAGAACAATATTTCC+TGG | - | chr4.3:66825943-66825962 | MS.gene93924:CDS | 35.0% | |
ATTAGTTGGGTTCTTGGATT+TGG | - | chr4.3:66825065-66825084 | MS.gene93924:intron | 35.0% | |
CAACTGTTCCAATGAGTATA+TGG | - | chr4.3:66826214-66826233 | MS.gene93924:intron | 35.0% | |
CCATGCTTCTTAGTTCATTT+GGG | + | chr4.3:66826323-66826342 | None:intergenic | 35.0% | |
CGAATATGTGCTCATAGATA+GGG | + | chr4.3:66826029-66826048 | None:intergenic | 35.0% | |
CGACATATCATTCATTAGCA+AGG | + | chr4.3:66823400-66823419 | None:intergenic | 35.0% | |
CGATGATCATTACAACACAA+GGG | + | chr4.3:66825094-66825113 | None:intergenic | 35.0% | |
CTAAAAATAGCACAAGAGCA+TGG | - | chr4.3:66826171-66826190 | MS.gene93924:intron | 35.0% | |
CTGAGGAGAACAATATGTAA+GGG | + | chr4.3:66824832-66824851 | None:intergenic | 35.0% | |
CTTCGCTTCAAACGATAAAA+TGG | - | chr4.3:66825983-66826002 | MS.gene93924:CDS | 35.0% | |
GAAGCTCATTCTTTAATTGG+TGG | - | chr4.3:66824979-66824998 | MS.gene93924:intron | 35.0% | |
GAGAACAATATGTAAGGGAA+GGG | + | chr4.3:66824827-66824846 | None:intergenic | 35.0% | |
GATAACATTAGTTGGGTTCT+TGG | - | chr4.3:66825059-66825078 | MS.gene93924:intron | 35.0% | |
GCTACAAGTTTCATCTTCTT+TGG | + | chr4.3:66825803-66825822 | None:intergenic | 35.0% | |
GCTCAATTAGCTATTGTTGA+TGG | - | chr4.3:66823190-66823209 | MS.gene93924:CDS | 35.0% | |
TATCTTAACACTGTCTTCCA+TGG | - | chr4.3:66824649-66824668 | MS.gene93924:CDS | 35.0% | |
TGTACCTATGATAAACCAAG+CGG | + | chr4.3:66823272-66823291 | None:intergenic | 35.0% | |
TTACATTCTTCACCAAGCAA+GGG | - | chr4.3:66825914-66825933 | MS.gene93924:CDS | 35.0% | |
TTCAAAATCCGTCGTTGATA+AGG | + | chr4.3:66825237-66825256 | None:intergenic | 35.0% | |
TTGTTGCGGCTATAAGAAAT+TGG | - | chr4.3:66825204-66825223 | MS.gene93924:intron | 35.0% | |
TTTACATTCTTCACCAAGCA+AGG | - | chr4.3:66825913-66825932 | MS.gene93924:CDS | 35.0% | |
! | ACACGACCAATTCTAAGAAA+GGG | + | chr4.3:66825182-66825201 | None:intergenic | 35.0% |
! | AGGAGAAATTTTCGGTATCA+TGG | - | chr4.3:66823971-66823990 | MS.gene93924:intron | 35.0% |
! | ATTTTCGGTATCATGGAGTT+TGG | - | chr4.3:66823978-66823997 | MS.gene93924:intron | 35.0% |
! | CCAAATGAACTAAGAAGCAT+GGG | - | chr4.3:66826321-66826340 | MS.gene93924:intron | 35.0% |
! | GCACTCTATTTGAGTATTGT+TGG | - | chr4.3:66826348-66826367 | MS.gene93924:intron | 35.0% |
! | TCTAAGGTTGGTTCCAATTT+GGG | - | chr4.3:66825852-66825871 | MS.gene93924:intron | 35.0% |
! | TTTAGAGCTCAGTTAGTGTT+TGG | - | chr4.3:66825438-66825457 | MS.gene93924:intron | 35.0% |
! | TTTATCGTTTGAAGCGAAGA+GGG | + | chr4.3:66825982-66826001 | None:intergenic | 35.0% |
!! | AGGTTGGTTTGATAAAGAGT+TGG | - | chr4.3:66823329-66823348 | MS.gene93924:CDS | 35.0% |
!! | CTTTTTGTTTGGAGTTTCTG+AGG | - | chr4.3:66826254-66826273 | MS.gene93924:intron | 35.0% |
!! | GGAATTAGTTTGAGTTGGTT+AGG | + | chr4.3:66825681-66825700 | None:intergenic | 35.0% |
!! | GGCGTAAAAATTCAAGTTGT+TGG | + | chr4.3:66823932-66823951 | None:intergenic | 35.0% |
!! | TCTGAGGTTTTTACTATGGT+TGG | - | chr4.3:66826270-66826289 | MS.gene93924:intron | 35.0% |
!! | TTCTAAGGTTGGTTCCAATT+TGG | - | chr4.3:66825851-66825870 | MS.gene93924:intron | 35.0% |
!! | TTTTATCGTTTGAAGCGAAG+AGG | + | chr4.3:66825983-66826002 | None:intergenic | 35.0% |
!!! | CATGTTTTGATGTTGGTCAT+TGG | - | chr4.3:66824752-66824771 | MS.gene93924:CDS | 35.0% |
!!! | TACTTTTATTGGTTCCTTGC+TGG | - | chr4.3:66826480-66826499 | MS.gene93924:CDS | 35.0% |
!!! | TAGAGACACTTTTAGTTTGG+TGG | - | chr4.3:66824321-66824340 | MS.gene93924:intron | 35.0% |
!!! | TTCGTTGCTGATTCTTTTCT+TGG | - | chr4.3:66823795-66823814 | MS.gene93924:CDS | 35.0% |
!!! | TTTTACTATGGTTGGTCTTC+AGG | - | chr4.3:66826278-66826297 | MS.gene93924:intron | 35.0% |
AACCTTGTGTTCAAGCTTTC+GGG | - | chr4.3:66824913-66824932 | MS.gene93924:CDS | 40.0% | |
AAGAAGCTAAGGCTGTTCTA+AGG | - | chr4.3:66825836-66825855 | MS.gene93924:intron | 40.0% | |
AATTGGTCGTGTCTTTGTTG+CGG | - | chr4.3:66825190-66825209 | MS.gene93924:intron | 40.0% | |
ACCAAAGTTGAAGCCCAAAT+TGG | + | chr4.3:66825868-66825887 | None:intergenic | 40.0% | |
ACCAACCACCATATACTCAT+TGG | + | chr4.3:66826225-66826244 | None:intergenic | 40.0% | |
ACTACTAGATTCAAACCCCA+AGG | + | chr4.3:66824147-66824166 | None:intergenic | 40.0% | |
AGATCCGCTTGGTTTATCAT+AGG | - | chr4.3:66823265-66823284 | MS.gene93924:CDS | 40.0% | |
CCCAAATGAACTAAGAAGCA+TGG | - | chr4.3:66826320-66826339 | MS.gene93924:intron | 40.0% | |
CCCATGCTTCTTAGTTCATT+TGG | + | chr4.3:66826324-66826343 | None:intergenic | 40.0% | |
CTCATTGGAACAGTTGCATT+TGG | + | chr4.3:66826210-66826229 | None:intergenic | 40.0% | |
CTGTTCCAATGAGTATATGG+TGG | - | chr4.3:66826217-66826236 | MS.gene93924:intron | 40.0% | |
GATGCAAGCTAGATGCAAAT+GGG | + | chr4.3:66824550-66824569 | None:intergenic | 40.0% | |
GCAAAGATGATCGTGAAAGT+TGG | - | chr4.3:66826424-66826443 | MS.gene93924:intron | 40.0% | |
GCGATGATCATTACAACACA+AGG | + | chr4.3:66825095-66825114 | None:intergenic | 40.0% | |
GGAGAACAATATGTAAGGGA+AGG | + | chr4.3:66824828-66824847 | None:intergenic | 40.0% | |
GGATCTCCAATAACCAGATT+CGG | + | chr4.3:66823251-66823270 | None:intergenic | 40.0% | |
TATCTAGTTGCCATTGGACA+AGG | - | chr4.3:66824882-66824901 | MS.gene93924:CDS | 40.0% | |
TCACTCTATCTAGTTGCCAT+TGG | - | chr4.3:66824876-66824895 | MS.gene93924:CDS | 40.0% | |
TCATCTTCTTTGGATCCCTT+TGG | + | chr4.3:66825793-66825812 | None:intergenic | 40.0% | |
TCCAATGAGTATATGGTGGT+TGG | - | chr4.3:66826221-66826240 | MS.gene93924:intron | 40.0% | |
TCCAATTTGGGCTTCAACTT+TGG | - | chr4.3:66825864-66825883 | MS.gene93924:intron | 40.0% | |
TGCTTGGAACAAGGACATAT+AGG | - | chr4.3:66825129-66825148 | MS.gene93924:intron | 40.0% | |
TGTCAATATTTGGTCCGGAA+CGG | - | chr4.3:66823746-66823765 | MS.gene93924:CDS | 40.0% | |
TTAGGTCCGAATCTGGTTAT+TGG | - | chr4.3:66823242-66823261 | MS.gene93924:CDS | 40.0% | |
! | GACACGACCAATTCTAAGAA+AGG | + | chr4.3:66825183-66825202 | None:intergenic | 40.0% |
! | TGAAACTTGTAGCCTTAGTG+AGG | - | chr4.3:66825810-66825829 | MS.gene93924:intron | 40.0% |
! | TGGGCTTCAACTTTGGTTTA+TGG | - | chr4.3:66825871-66825890 | MS.gene93924:intron | 40.0% |
!!! | GTGTGCTCATGTTTTGATGT+TGG | - | chr4.3:66824745-66824764 | MS.gene93924:CDS | 40.0% |
!!! | GTTTTGTTTAGGTGTCGAAG+TGG | - | chr4.3:66823632-66823651 | MS.gene93924:CDS | 40.0% |
AAACGTCCGGAATTTGCACT+GGG | + | chr4.3:66824209-66824228 | None:intergenic | 45.0% | |
ACCTTGTGTTCAAGCTTTCG+GGG | - | chr4.3:66824914-66824933 | MS.gene93924:CDS | 45.0% | |
AGCTTCTAACAGCACTTCGT+TGG | + | chr4.3:66823173-66823192 | None:intergenic | 45.0% | |
ATCCTAGGTAGAGCTCAACA+AGG | - | chr4.3:66825559-66825578 | MS.gene93924:intron | 45.0% | |
ATGCTTCAACGAATTGGCAC+TGG | - | chr4.3:66826093-66826112 | MS.gene93924:intron | 45.0% | |
CATTAGCAAGGTCTTAGCAC+CGG | + | chr4.3:66823388-66823407 | None:intergenic | 45.0% | |
CATTGGCAGCTTCCTTAACA+AGG | - | chr4.3:66825756-66825775 | MS.gene93924:intron | 45.0% | |
CCACTAGCAAGAGTTATCAC+CGG | - | chr4.3:66826051-66826070 | MS.gene93924:CDS | 45.0% | |
CTTGCTGGATTAAGTGTGGT+GGG | - | chr4.3:66826495-66826514 | MS.gene93924:CDS | 45.0% | |
GGATGCAAGCTAGATGCAAA+TGG | + | chr4.3:66824551-66824570 | None:intergenic | 45.0% | |
GGGCTGTCCTTTGTAATCAA+CGG | + | chr4.3:66823218-66823237 | None:intergenic | 45.0% | |
GTTCCTTGCTGGATTAAGTG+TGG | - | chr4.3:66826491-66826510 | MS.gene93924:CDS | 45.0% | |
TAAACGTCCGGAATTTGCAC+TGG | + | chr4.3:66824210-66824229 | None:intergenic | 45.0% | |
TAGCTTCTTCCACCTCACTA+AGG | + | chr4.3:66825825-66825844 | None:intergenic | 45.0% | |
TAGTGAGGTGGAAGAAGCTA+AGG | - | chr4.3:66825825-66825844 | MS.gene93924:intron | 45.0% | |
TAGTTGCCATTGGACAAGGT+GGG | - | chr4.3:66824886-66824905 | MS.gene93924:CDS | 45.0% | |
TTCCTTGTTGAGCTCTACCT+AGG | + | chr4.3:66825564-66825583 | None:intergenic | 45.0% | |
TTTATGCCCACCTTGTCCAA+TGG | + | chr4.3:66824895-66824914 | None:intergenic | 45.0% | |
! | AACTTGTAGCCTTAGTGAGG+TGG | - | chr4.3:66825813-66825832 | MS.gene93924:intron | 45.0% |
! | CATCTAGCTTGCATCCAAAC+TGG | - | chr4.3:66824555-66824574 | MS.gene93924:CDS | 45.0% |
! | CTTCTAGCTGTGTGCTCTTT+AGG | + | chr4.3:66824963-66824982 | None:intergenic | 45.0% |
! | GCGAAGTACCTTATCAACGA+CGG | - | chr4.3:66825226-66825245 | MS.gene93924:intron | 45.0% |
! | GGTGTTGGAAGCTTTCTAAG+TGG | - | chr4.3:66826369-66826388 | MS.gene93924:intron | 45.0% |
! | GTGTTAGCAGTGCCTTGTTA+AGG | + | chr4.3:66825771-66825790 | None:intergenic | 45.0% |
! | TCGATTTGTCTCCACCAGTT+TGG | + | chr4.3:66824572-66824591 | None:intergenic | 45.0% |
!! | AAGGCACTGCTAACACCAAA+GGG | - | chr4.3:66825775-66825794 | MS.gene93924:intron | 45.0% |
!! | AGCTAAGGCTGTTCTAAGGT+TGG | - | chr4.3:66825840-66825859 | MS.gene93924:intron | 45.0% |
!! | GCGGAGAGGGTATCATATTA+TGG | - | chr4.3:66823654-66823673 | MS.gene93924:CDS | 45.0% |
!! | GTTGCAGTGCTTTGTTTGAG+TGG | + | chr4.3:66823714-66823733 | None:intergenic | 45.0% |
!! | TGAAGCATTGTGATGCCTGA+GGG | + | chr4.3:66826081-66826100 | None:intergenic | 45.0% |
!! | TTGAAGCATTGTGATGCCTG+AGG | + | chr4.3:66826082-66826101 | None:intergenic | 45.0% |
!! | TTGTTTAGGTGTCGAAGTGG+CGG | - | chr4.3:66823635-66823654 | MS.gene93924:CDS | 45.0% |
AAGCACCTAAGAGAGGAAGG+AGG | + | chr4.3:66823776-66823795 | None:intergenic | 50.0% | |
AATCTAGTAGTCCGAGTCCG+AGG | - | chr4.3:66824156-66824175 | MS.gene93924:intron | 50.0% | |
ACCAGATTCGGACCTAACTG+CGG | + | chr4.3:66823239-66823258 | None:intergenic | 50.0% | |
AGCACCTAAGAGAGGAAGGA+GGG | + | chr4.3:66823775-66823794 | None:intergenic | 50.0% | |
AGTTGCCAGTTGCATCCTTG+GGG | - | chr4.3:66824129-66824148 | MS.gene93924:intron | 50.0% | |
ATGTCGCCCAGTGCAAATTC+CGG | - | chr4.3:66824200-66824219 | MS.gene93924:intron | 50.0% | |
CACCAAGCAAGGGACTTCAA+TGG | - | chr4.3:66825924-66825943 | MS.gene93924:CDS | 50.0% | |
CAGTTGCCAGTTGCATCCTT+GGG | - | chr4.3:66824128-66824147 | MS.gene93924:intron | 50.0% | |
CCACCACACTTAATCCAGCA+AGG | + | chr4.3:66826497-66826516 | None:intergenic | 50.0% | |
CCGGTGATAACTCTTGCTAG+TGG | + | chr4.3:66826054-66826073 | None:intergenic | 50.0% | |
CCTTGCTGGATTAAGTGTGG+TGG | - | chr4.3:66826494-66826513 | MS.gene93924:CDS | 50.0% | |
CTAGTTGCCATTGGACAAGG+TGG | - | chr4.3:66824885-66824904 | MS.gene93924:CDS | 50.0% | |
CTCCATTGAAGTCCCTTGCT+TGG | + | chr4.3:66825929-66825948 | None:intergenic | 50.0% | |
CTGGTTATTGGAGATCCGCT+TGG | - | chr4.3:66823254-66823273 | MS.gene93924:CDS | 50.0% | |
GTTATCACCGGAAAACCCTC+AGG | - | chr4.3:66826063-66826082 | MS.gene93924:CDS | 50.0% | |
TCAAACCCCAAGGATGCAAC+TGG | + | chr4.3:66824137-66824156 | None:intergenic | 50.0% | |
TGTCACCATTACCTCGGACT+CGG | + | chr4.3:66824170-66824189 | None:intergenic | 50.0% | |
TTGTGTTCAAGCTTTCGGGG+CGG | - | chr4.3:66824917-66824936 | MS.gene93924:CDS | 50.0% | |
! | ATCGTTTGAAGCGAAGAGGG+AGG | + | chr4.3:66825979-66825998 | None:intergenic | 50.0% |
! | CTAGCTTGCATCCAAACTGG+TGG | - | chr4.3:66824558-66824577 | MS.gene93924:CDS | 50.0% |
! | GAGGGAGGTATGTCAAATCC+AGG | + | chr4.3:66825964-66825983 | None:intergenic | 50.0% |
! | GATGGCGCCGTTGATTACAA+AGG | - | chr4.3:66823208-66823227 | MS.gene93924:CDS | 50.0% |
! | TGTGATGCCTGAGGGTTTTC+CGG | + | chr4.3:66826073-66826092 | None:intergenic | 50.0% |
! | TTTGGTGGCTGGGATGAGAA+AGG | + | chr4.3:66823537-66823556 | None:intergenic | 50.0% |
!! | CAAGGCACTGCTAACACCAA+AGG | - | chr4.3:66825774-66825793 | MS.gene93924:intron | 50.0% |
!! | CGAAAGCACCTAAGAGAGGA+AGG | + | chr4.3:66823779-66823798 | None:intergenic | 50.0% |
!! | GCAACGAAAGCACCTAAGAG+AGG | + | chr4.3:66823783-66823802 | None:intergenic | 50.0% |
!! | GTCTGGTGTCACCATTACCT+CGG | + | chr4.3:66824176-66824195 | None:intergenic | 50.0% |
ACAAAGGACAGCCCGCAGTT+AGG | - | chr4.3:66823224-66823243 | MS.gene93924:CDS | 55.0% | |
CACTGGGCGACATGTTAGTC+TGG | + | chr4.3:66824193-66824212 | None:intergenic | 55.0% | |
CCAGATTCGGACCTAACTGC+GGG | + | chr4.3:66823238-66823257 | None:intergenic | 55.0% | |
GCAGTTGCCAGTTGCATCCT+TGG | - | chr4.3:66824127-66824146 | MS.gene93924:intron | 55.0% | |
GCCCCGAAAGCTTGAACACA+AGG | + | chr4.3:66824918-66824937 | None:intergenic | 55.0% | |
GCGGATTCAACTTCTGCCAC+CGG | - | chr4.3:66823366-66823385 | MS.gene93924:CDS | 55.0% | |
GCTTCCCTCCTTCCTCTCTT+AGG | - | chr4.3:66823768-66823787 | MS.gene93924:CDS | 55.0% | |
GTAGTCCGAGTCCGAGGTAA+TGG | - | chr4.3:66824162-66824181 | MS.gene93924:intron | 55.0% | |
! | TAGCAAGGTCTTAGCACCGG+TGG | + | chr4.3:66823385-66823404 | None:intergenic | 55.0% |
AGAAGTTGAATCCGCGCGCG+GGG | + | chr4.3:66823361-66823380 | None:intergenic | 60.0% | |
AGGAAGGAGGGAAGCCGTTC+CGG | + | chr4.3:66823763-66823782 | None:intergenic | 60.0% | |
CAGAAGTTGAATCCGCGCGC+GGG | + | chr4.3:66823362-66823381 | None:intergenic | 60.0% | |
CCCGCAGTTAGGTCCGAATC+TGG | - | chr4.3:66823235-66823254 | MS.gene93924:CDS | 60.0% | |
GCAGAAGTTGAATCCGCGCG+CGG | + | chr4.3:66823363-66823382 | None:intergenic | 60.0% | |
!! | AGGTGTCGAAGTGGCGGAGA+GGG | - | chr4.3:66823641-66823660 | MS.gene93924:CDS | 60.0% |
!! | TAGGTGTCGAAGTGGCGGAG+AGG | - | chr4.3:66823640-66823659 | MS.gene93924:CDS | 60.0% |
GTTGGTCAATACCCCGCGCG+CGG | - | chr4.3:66823347-66823366 | MS.gene93924:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 66823160 | 66826581 | 66823160 | ID=MS.gene93924 |
chr4.3 | mRNA | 66823160 | 66826581 | 66823160 | ID=MS.gene93924.t1;Parent=MS.gene93924 |
chr4.3 | exon | 66826455 | 66826581 | 66826455 | ID=MS.gene93924.t1.exon1;Parent=MS.gene93924.t1 |
chr4.3 | CDS | 66826455 | 66826581 | 66826455 | ID=cds.MS.gene93924.t1;Parent=MS.gene93924.t1 |
chr4.3 | exon | 66825881 | 66826098 | 66825881 | ID=MS.gene93924.t1.exon2;Parent=MS.gene93924.t1 |
chr4.3 | CDS | 66825881 | 66826098 | 66825881 | ID=cds.MS.gene93924.t1;Parent=MS.gene93924.t1 |
chr4.3 | exon | 66824438 | 66824949 | 66824438 | ID=MS.gene93924.t1.exon3;Parent=MS.gene93924.t1 |
chr4.3 | CDS | 66824438 | 66824949 | 66824438 | ID=cds.MS.gene93924.t1;Parent=MS.gene93924.t1 |
chr4.3 | exon | 66823160 | 66823976 | 66823160 | ID=MS.gene93924.t1.exon4;Parent=MS.gene93924.t1 |
chr4.3 | CDS | 66823160 | 66823976 | 66823160 | ID=cds.MS.gene93924.t1;Parent=MS.gene93924.t1 |
Gene Sequence |
Protein sequence |