AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48607

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48607.t1 MTR_0294s0020 92.613 555 41 0 1 555 1 555 0.0 1031
MS.gene48607.t1 MTR_4g033315 86.535 557 73 1 1 555 1 557 0.0 973
MS.gene48607.t1 MTR_4g033310 86.535 557 73 1 1 555 1 557 0.0 973
MS.gene48607.t1 MTR_4g033325 86.918 558 67 3 1 555 1 555 0.0 971
MS.gene48607.t1 MTR_4g033330 86.867 533 68 1 1 531 1 533 0.0 926
MS.gene48607.t1 MTR_4g033395 83.133 498 80 3 1 494 1 498 0.0 852
MS.gene48607.t1 MTR_4g033375 83.936 498 76 3 1 494 1 498 0.0 850
MS.gene48607.t1 MTR_4g033325 86.682 443 53 3 116 555 18 457 0.0 786
MS.gene48607.t1 MTR_4g033325 86.866 434 51 3 125 555 1 431 0.0 773
MS.gene48607.t1 MTR_4g033385 83.296 443 71 2 116 555 16 458 0.0 771
MS.gene48607.t1 MTR_3g005010 65.185 540 179 4 13 550 12 544 0.0 705
MS.gene48607.t1 MTR_4g033310 86.513 304 39 1 254 555 190 493 0.0 547
MS.gene48607.t1 MTR_4g033310 87.500 192 24 0 1 192 1 192 1.24e-106 329
MS.gene48607.t1 MTR_8g038880 48.066 543 248 7 30 549 19 550 2.45e-166 484
MS.gene48607.t1 MTR_3g014790 44.956 565 265 11 17 552 5 552 6.62e-162 473
MS.gene48607.t1 MTR_7g067010 41.982 555 295 8 17 548 10 560 2.68e-156 459
MS.gene48607.t1 MTR_7g098200 41.187 556 301 6 17 549 15 567 3.01e-152 449
MS.gene48607.t1 MTR_4g015080 41.293 557 300 7 17 550 20 572 3.47e-152 448
MS.gene48607.t1 MTR_3g462710 42.115 558 294 9 17 549 10 563 4.55e-151 445
MS.gene48607.t1 MTR_7g098200 40.842 546 307 4 17 549 15 557 1.30e-150 445
MS.gene48607.t1 MTR_3g069500 39.928 556 295 8 17 549 21 560 2.20e-149 441
MS.gene48607.t1 MTR_4g019580 39.856 557 304 7 17 550 22 570 2.37e-149 442
MS.gene48607.t1 MTR_3g069440 40.000 560 299 10 17 549 19 568 8.58e-147 435
MS.gene48607.t1 MTR_3g072300 39.928 556 311 5 17 551 10 563 1.79e-146 434
MS.gene48607.t1 MTR_3g069420 39.298 570 312 8 3 549 11 569 4.73e-145 431
MS.gene48607.t1 MTR_1g041835 41.261 555 299 8 17 548 13 563 8.29e-144 427
MS.gene48607.t1 MTR_7g098180 39.677 557 309 5 17 549 17 570 3.00e-143 426
MS.gene48607.t1 MTR_1g042310 39.856 557 307 7 17 549 12 564 8.69e-143 425
MS.gene48607.t1 MTR_7g065080 38.179 571 317 9 3 550 2 559 2.71e-142 423
MS.gene48607.t1 MTR_1g041815 40.468 556 304 8 17 549 13 564 5.69e-140 418
MS.gene48607.t1 MTR_7g098160 38.849 556 314 6 17 549 19 571 6.91e-140 418
MS.gene48607.t1 MTR_7g098040 38.309 556 317 5 17 549 20 572 1.36e-138 415
MS.gene48607.t1 MTR_1g075440 38.309 556 315 7 17 548 14 565 2.28e-136 409
MS.gene48607.t1 MTR_7g098090 38.146 561 316 6 17 549 19 576 1.23e-134 405
MS.gene48607.t1 MTR_1g042310 39.924 526 288 7 48 549 6 527 9.43e-133 398
MS.gene48607.t1 MTR_1g041875 38.290 538 295 8 17 529 15 540 1.32e-131 396
MS.gene48607.t1 MTR_7g098230 37.570 535 308 6 38 549 33 564 3.40e-131 395
MS.gene48607.t1 MTR_1g042310 39.695 524 288 7 50 549 1 520 6.94e-131 393
MS.gene48607.t1 MTR_7g098220 37.050 556 324 6 17 549 16 568 1.20e-126 384
MS.gene48607.t1 MTR_5g012270 37.653 571 323 8 12 553 10 576 2.60e-126 382
MS.gene48607.t1 MTR_4g101380 39.716 564 302 8 21 551 17 575 2.25e-125 380
MS.gene48607.t1 MTR_5g012290 39.037 561 307 8 21 551 17 572 6.59e-123 374
MS.gene48607.t1 MTR_5g055000 37.209 559 312 10 28 552 15 568 6.11e-121 369
MS.gene48607.t1 MTR_1g041885 38.583 508 275 8 50 532 1 496 1.83e-120 366
MS.gene48607.t1 MTR_6g008690 36.364 539 305 9 36 550 12 536 4.82e-117 357
MS.gene48607.t1 MTR_7g010820 36.555 569 328 10 10 548 5 570 2.21e-116 357
MS.gene48607.t1 MTR_7g065080 37.526 485 268 8 88 550 1 472 3.35e-116 353
MS.gene48607.t1 MTR_3g112460 36.957 552 309 10 17 543 9 546 6.84e-116 355
MS.gene48607.t1 MTR_3g112470 36.957 552 309 10 17 543 9 546 1.19e-115 354
MS.gene48607.t1 MTR_7g098220 36.571 525 307 6 48 549 3 524 1.94e-114 351
MS.gene48607.t1 MTR_7g088825 36.051 552 318 10 29 551 20 565 2.65e-114 352
MS.gene48607.t1 MTR_7g088820 35.035 568 330 11 1 539 1 558 4.92e-114 351
MS.gene48607.t1 MTR_7g005930 34.608 549 325 9 23 546 27 566 1.28e-112 347
MS.gene48607.t1 MTR_3g462710 41.379 435 234 7 133 550 25 455 5.81e-112 341
MS.gene48607.t1 MTR_5g014150 35.478 575 335 10 3 546 16 585 1.45e-111 345
MS.gene48607.t1 MTR_7g098200 38.816 456 253 6 117 549 1 453 1.51e-109 336
MS.gene48607.t1 MTR_7g088790 34.261 575 341 9 9 552 7 575 1.04e-107 335
MS.gene48607.t1 MTR_4g107670 34.435 575 336 9 10 549 3 571 2.44e-107 333
MS.gene48607.t1 MTR_4g098800 35.179 560 322 10 16 544 21 570 3.96e-107 333
MS.gene48607.t1 MTR_4g098800 35.179 560 322 10 16 544 86 635 2.67e-106 333
MS.gene48607.t1 MTR_7g098150 38.341 446 249 5 17 439 19 461 1.81e-105 325
MS.gene48607.t1 MTR_2g005130 35.294 561 326 9 10 549 19 563 3.31e-105 328
MS.gene48607.t1 MTR_5g038060 34.775 555 322 9 29 549 29 577 3.81e-104 326
MS.gene48607.t1 MTR_4g114340 38.809 554 304 9 16 543 9 553 5.66e-104 325
MS.gene48607.t1 MTR_5g038380 34.024 579 340 10 11 554 8 579 9.34e-104 324
MS.gene48607.t1 MTR_3g112450 34.636 563 331 10 9 546 1 551 2.35e-103 323
MS.gene48607.t1 MTR_7g013270 33.514 555 325 11 23 546 82 623 5.90e-103 324
MS.gene48607.t1 MTR_1g116930 33.945 545 326 8 27 546 19 554 6.31e-103 322
MS.gene48607.t1 MTR_8g469310 35.088 570 327 9 18 552 13 574 1.69e-102 321
MS.gene48607.t1 MTR_2g017750 33.165 594 348 12 2 552 4 591 2.52e-102 321
MS.gene48607.t1 MTR_7g088820 35.081 496 289 9 73 539 5 496 8.84e-102 317
MS.gene48607.t1 MTR_8g087780 35.304 575 333 12 15 552 5 577 1.06e-101 319
MS.gene48607.t1 MTR_4g107510 34.058 552 322 10 35 550 40 585 3.84e-98 310
MS.gene48607.t1 MTR_8g087810 35.243 576 333 11 15 552 5 578 7.46e-98 309
MS.gene48607.t1 MTR_5g085850 36.348 564 319 9 17 555 16 564 1.66e-96 305
MS.gene48607.t1 MTR_3g100980 33.273 550 333 10 25 549 10 550 3.36e-95 301
MS.gene48607.t1 MTR_8g469480 33.574 554 328 9 35 555 42 588 5.40e-95 302
MS.gene48607.t1 MTR_1g026740 33.210 542 327 8 33 546 19 553 1.06e-94 300
MS.gene48607.t1 MTR_4g107580 32.799 561 332 10 21 548 24 572 4.50e-94 300
MS.gene48607.t1 MTR_4g123537 33.213 554 339 11 18 550 28 571 1.67e-93 298
MS.gene48607.t1 MTR_1g026750 32.799 561 340 9 16 546 1 554 1.91e-93 297
MS.gene48607.t1 MTR_8g469470 32.028 562 341 9 23 548 24 580 2.08e-93 297
MS.gene48607.t1 MTR_1g026770 32.967 546 334 8 27 546 11 550 5.83e-93 295
MS.gene48607.t1 MTR_8g103233 33.088 544 335 10 28 546 14 553 2.34e-92 294
MS.gene48607.t1 MTR_5g038190 30.919 566 355 7 15 549 8 568 2.63e-92 294
MS.gene48607.t1 MTR_7g006540 31.794 563 337 12 30 553 62 616 7.49e-91 292
MS.gene48607.t1 MTR_4g107530 32.933 583 342 12 3 550 14 582 1.73e-89 288
MS.gene48607.t1 MTR_3g100980 31.889 577 331 12 25 548 10 577 4.03e-89 286
MS.gene48607.t1 MTR_1g009200 32.168 572 342 12 4 546 10 564 7.63e-89 285
MS.gene48607.t1 MTR_7g088820 34.076 449 263 9 120 539 4 448 2.36e-87 278
MS.gene48607.t1 MTR_4g107610 30.651 584 363 10 3 553 2 576 2.54e-86 279
MS.gene48607.t1 MTR_7g111260 31.550 542 342 9 29 551 17 548 6.54e-85 275
MS.gene48607.t1 MTR_7g064780 28.319 565 363 8 17 547 12 568 9.41e-84 272
MS.gene48607.t1 MTR_1g085090 30.396 556 356 11 17 551 3 548 1.12e-83 272
MS.gene48607.t1 MTR_4g011280 32.007 553 337 12 25 548 27 569 1.48e-83 272
MS.gene48607.t1 MTR_2g101650 30.660 561 351 12 17 546 10 563 1.49e-83 271
MS.gene48607.t1 MTR_2g101590 32.753 574 339 17 10 548 4 565 5.61e-83 271
MS.gene48607.t1 MTR_2g101610 31.065 573 351 14 10 548 4 566 4.25e-81 266
MS.gene48607.t1 MTR_7g098210 32.108 517 259 9 50 549 1 442 2.24e-80 259
MS.gene48607.t1 MTR_2g101640 29.101 567 364 9 10 546 4 562 5.08e-77 255
MS.gene48607.t1 MTR_7g064800 29.443 557 349 8 27 547 22 570 1.23e-76 253
MS.gene48607.t1 MTR_1g057460 30.996 542 339 13 25 548 40 564 5.01e-75 249
MS.gene48607.t1 MTR_2g101560 30.351 570 355 13 12 548 6 566 1.62e-74 249
MS.gene48607.t1 MTR_4g024930 28.962 549 353 11 17 546 22 552 1.16e-72 242
MS.gene48607.t1 MTR_1g057460 30.512 508 320 11 59 548 1 493 5.40e-72 239
MS.gene48607.t1 MTR_2g093640 31.294 572 332 13 16 550 1 548 8.57e-70 234
MS.gene48607.t1 MTR_2g093160 30.298 571 339 12 16 550 1 548 1.94e-69 233
MS.gene48607.t1 MTR_2g093180 31.010 574 332 14 16 550 1 549 7.45e-69 232
MS.gene48607.t1 MTR_0236s0050 28.937 508 328 10 59 548 1 493 3.33e-68 229
MS.gene48607.t1 MTR_7g051880 28.678 537 354 7 17 546 11 525 1.50e-64 219
MS.gene48607.t1 MTR_7g052600 28.492 537 355 8 17 546 11 525 1.80e-62 214
MS.gene48607.t1 MTR_7g051830 28.305 537 356 7 17 546 11 525 1.87e-61 211
MS.gene48607.t1 MTR_4g033390 90.000 90 9 0 464 553 30 119 5.49e-54 179
MS.gene48607.t1 MTR_1g009170 29.177 401 227 11 141 529 3 358 1.87e-43 159
MS.gene48607.t1 MTR_3g065350 38.509 161 91 4 316 476 1 153 1.47e-29 114
MS.gene48607.t1 MTR_7g064160 27.273 99 72 0 17 115 15 113 2.24e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48607.t1 AT1G22540 63.620 547 185 4 10 547 9 550 0.0 674
MS.gene48607.t1 AT1G72140 55.941 547 215 4 16 549 19 552 0.0 608
MS.gene48607.t1 AT1G72125 56.318 554 229 5 12 554 10 561 0.0 606
MS.gene48607.t1 AT1G72120 56.912 557 229 6 1 550 1 553 0.0 603
MS.gene48607.t1 AT1G22550 54.690 565 234 6 1 550 3 560 0.0 595
MS.gene48607.t1 AT1G22570 55.335 553 223 7 16 550 15 561 0.0 573
MS.gene48607.t1 AT1G72130 54.631 529 218 6 29 551 23 535 0.0 542
MS.gene48607.t1 AT1G22570 54.839 527 214 7 42 550 4 524 0.0 540
MS.gene48607.t1 AT3G54450 44.118 544 269 8 29 549 11 542 1.27e-167 487
MS.gene48607.t1 AT2G02040 40.522 575 302 9 3 546 13 578 4.41e-151 446
MS.gene48607.t1 AT5G01180 40.957 564 305 8 10 549 4 563 1.24e-150 444
MS.gene48607.t1 AT5G01180 40.957 564 305 8 10 549 4 563 1.24e-150 444
MS.gene48607.t1 AT5G01180 40.957 564 305 8 10 549 4 563 1.24e-150 444
MS.gene48607.t1 AT3G54140 40.934 557 300 7 17 548 10 562 8.23e-150 442
MS.gene48607.t1 AT3G54140 40.934 557 300 7 17 548 10 562 8.23e-150 442
MS.gene48607.t1 AT1G72130 51.843 434 187 6 125 552 1 418 1.20e-146 429
MS.gene48607.t1 AT1G72130 51.843 434 187 6 125 552 1 418 1.20e-146 429
MS.gene48607.t1 AT2G37900 40.603 564 297 9 10 549 17 566 8.82e-144 427
MS.gene48607.t1 AT3G53960 38.783 575 314 9 3 549 9 573 7.22e-143 426
MS.gene48607.t1 AT1G62200 40.035 567 297 9 3 539 24 577 7.61e-141 420
MS.gene48607.t1 AT2G40460 40.502 558 307 7 11 549 4 555 2.81e-138 413
MS.gene48607.t1 AT2G02020 39.464 560 300 9 1 548 10 542 9.85e-136 405
MS.gene48607.t1 AT1G62200 37.752 596 299 8 3 539 38 620 5.07e-135 406
MS.gene48607.t1 AT1G62200 37.752 596 299 8 3 539 24 606 5.09e-135 406
MS.gene48607.t1 AT5G46040 38.879 535 302 6 17 529 13 544 1.08e-131 396
MS.gene48607.t1 AT5G46050 37.410 556 321 6 17 549 13 564 4.11e-129 389
MS.gene48607.t1 AT5G14940 38.404 539 306 7 29 546 5 538 3.83e-126 381
MS.gene48607.t1 AT2G02020 38.036 560 287 10 1 548 10 521 4.98e-123 372
MS.gene48607.t1 AT2G37900 40.200 500 261 9 74 549 2 487 5.17e-122 369
MS.gene48607.t1 AT3G01350 37.201 543 305 8 33 544 9 546 5.42e-118 360
MS.gene48607.t1 AT1G69870 37.071 553 311 9 28 549 48 594 1.97e-114 353
MS.gene48607.t1 AT1G68570 37.848 539 304 6 40 549 32 568 1.93e-112 347
MS.gene48607.t1 AT1G68570 37.828 534 301 6 45 549 7 538 1.14e-111 344
MS.gene48607.t1 AT1G32450 35.461 564 325 9 17 546 23 581 2.14e-110 342
MS.gene48607.t1 AT1G12110 35.395 582 326 12 3 551 7 571 6.23e-109 338
MS.gene48607.t1 AT4G21680 35.563 568 331 11 12 548 9 572 2.21e-106 331
MS.gene48607.t1 AT2G26690 37.297 555 310 11 16 543 9 552 1.96e-105 328
MS.gene48607.t1 AT3G21670 36.937 555 309 9 21 549 19 558 2.91e-101 318
MS.gene48607.t1 AT1G69850 32.479 585 349 9 9 552 3 582 6.18e-100 314
MS.gene48607.t1 AT1G33440 36.063 574 313 11 7 546 14 567 6.52e-100 315
MS.gene48607.t1 AT1G27040 32.574 571 359 8 6 555 2 567 3.46e-99 312
MS.gene48607.t1 AT1G27040 32.857 560 350 8 17 555 9 563 9.22e-99 310
MS.gene48607.t1 AT1G59740 34.477 554 323 10 20 544 30 572 1.11e-98 311
MS.gene48607.t1 AT1G18880 32.609 552 337 9 35 555 23 570 1.04e-96 306
MS.gene48607.t1 AT5G46050 36.123 454 263 6 119 549 3 452 1.52e-95 299
MS.gene48607.t1 AT2G26690 36.742 528 296 11 43 543 3 519 1.54e-95 301
MS.gene48607.t1 AT3G16180 33.393 557 329 11 25 546 16 565 1.31e-94 301
MS.gene48607.t1 AT1G52190 33.210 542 322 9 40 546 30 566 2.09e-94 300
MS.gene48607.t1 AT5G62730 31.449 566 357 9 1 548 32 584 2.45e-92 295
MS.gene48607.t1 AT1G27040 32.959 534 332 8 43 555 7 535 3.49e-92 293
MS.gene48607.t1 AT5G19640 32.965 543 315 13 32 546 60 581 2.92e-91 292
MS.gene48607.t1 AT2G26690 36.293 518 292 11 53 543 1 507 1.50e-90 288
MS.gene48607.t1 AT5G62680 32.058 549 336 10 35 549 47 592 3.04e-88 285
MS.gene48607.t1 AT5G13400 30.783 562 353 8 20 548 52 610 1.96e-87 283
MS.gene48607.t1 AT1G27080 32.327 563 334 12 18 549 2 548 3.62e-86 278
MS.gene48607.t1 AT5G62730 31.262 531 340 8 37 549 3 526 1.29e-85 275
MS.gene48607.t1 AT3G47960 32.240 549 333 11 35 549 65 608 1.30e-84 276
MS.gene48607.t1 AT5G28470 30.270 555 346 13 28 551 14 558 4.43e-80 262
MS.gene48607.t1 AT1G69860 32.110 545 325 11 35 550 22 550 2.92e-79 259
MS.gene48607.t1 AT3G25280 31.716 536 331 11 21 546 11 521 4.55e-78 255
MS.gene48607.t1 AT1G27080 32.177 519 306 11 62 549 3 506 1.27e-77 254
MS.gene48607.t1 AT5G28470 30.090 555 345 14 28 551 14 556 2.55e-77 254
MS.gene48607.t1 AT3G25260 30.755 543 339 11 12 546 2 515 7.50e-75 247
MS.gene48607.t1 AT3G45710 31.034 551 323 12 31 550 21 545 2.04e-68 231
MS.gene48607.t1 AT3G45650 29.517 559 351 13 17 553 8 545 3.85e-68 230
MS.gene48607.t1 AT3G45680 30.541 573 338 16 11 553 2 544 8.85e-68 229
MS.gene48607.t1 AT3G45660 30.368 517 315 10 58 550 48 543 2.07e-66 225
MS.gene48607.t1 AT3G45660 30.368 517 315 10 58 550 48 543 2.07e-66 225
MS.gene48607.t1 AT3G45660 30.368 517 315 10 58 550 69 564 3.88e-66 225
MS.gene48607.t1 AT3G45700 30.387 543 332 11 30 550 15 533 8.34e-66 224
MS.gene48607.t1 AT5G11570 27.322 549 315 9 9 546 1 476 2.65e-64 218
MS.gene48607.t1 AT3G45650 28.473 583 352 13 17 553 8 571 1.09e-62 216
MS.gene48607.t1 AT3G45720 29.596 544 324 15 40 553 28 542 7.68e-61 211
MS.gene48607.t1 AT3G45690 29.644 533 292 15 30 538 17 490 1.81e-56 198
MS.gene48607.t1 AT2G38100 27.553 519 311 17 59 548 2 484 5.23e-43 160
MS.gene48607.t1 AT2G38100 27.553 519 311 17 59 548 18 500 6.79e-43 160
MS.gene48607.t1 AT2G38100 27.553 519 311 17 59 548 24 506 9.72e-43 160

Find 104 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCTACAACTTTGGTTTA+TGG 0.167031 4.1:-66957846 MS.gene48607:CDS
CTAGAAGCTCATTCTTTAAT+TGG 0.184688 4.1:-66958544 MS.gene48607:CDS
AAACCTTGTGTTCAAGCTTT+TGG 0.192944 4.1:-66958608 MS.gene48607:CDS
TACTAAGGTTGGTTCCAATT+TGG 0.203651 4.1:-66957866 MS.gene48607:CDS
GATAACTATAGTTGGATTCT+TGG 0.220654 4.1:-66958461 MS.gene48607:CDS
CCCATGCTTCTTAGTTCATT+TGG 0.227438 4.1:+66957396 None:intergenic
CACAAATATCCGGTCGTAGA+TGG 0.247206 4.1:+66957689 None:intergenic
GCAGAGAGGATATCATATTT+TGG 0.269709 4.1:-66962144 MS.gene48607:CDS
TATAGTTGGATTCTTGGATT+TGG 0.272236 4.1:-66958455 MS.gene48607:CDS
GACATATAGGTTTAACATTA+AGG 0.274752 4.1:-66958378 MS.gene48607:CDS
TTAGGTCCAAATCTGGTTAT+TGG 0.278576 4.1:-66963008 MS.gene48607:CDS
ACCAAAGTTGTAGCCCAAAT+TGG 0.299132 4.1:+66957852 None:intergenic
TCCAATTTGGGCTACAACTT+TGG 0.299380 4.1:-66957853 MS.gene48607:CDS
ACTACAAGTCTCGTCTTCTT+TGG 0.301060 4.1:+66957917 None:intergenic
CTGCTAAGAATGTGAATATT+TGG 0.301956 4.1:-66962062 MS.gene48607:CDS
ACTAAGGTTGGTTCCAATTT+GGG 0.303752 4.1:-66957865 MS.gene48607:CDS
CCATGCTTCTTAGTTCATTT+GGG 0.326976 4.1:+66957397 None:intergenic
CTCATTGGAACAGTTGCATT+TGG 0.332167 4.1:+66957510 None:intergenic
ATCACATTGCTTCAAAGAAT+TGG 0.335669 4.1:-66957630 MS.gene48607:CDS
GCTGCTCTCCTTCCTCTGTT+AGG 0.340850 4.1:-66962030 MS.gene48607:CDS
TGCTTCTCTTATCTACATAT+TGG 0.348865 4.1:-66961959 MS.gene48607:intron
GCACTCTATTTGAGTATTGT+TGG 0.363231 4.1:-66957369 MS.gene48607:CDS
ATGCAGAAAACAATAGTTCC+TGG 0.369097 4.1:-66957774 MS.gene48607:CDS
TTCAATATCCGCTGTTGATA+AGG 0.369755 4.1:+66958286 None:intergenic
GCTCAGTTAGCTCTTGTTGA+TGG 0.370280 4.1:-66963060 MS.gene48607:CDS
TCGTTGCAGCTGTAAGAAAT+TGG 0.371085 4.1:-66958316 MS.gene48607:CDS
AGATCTGCTTGGTTTATCAT+AGG 0.387829 4.1:-66962985 MS.gene48607:intron
AGATCTCCAATAACCAGATT+TGG 0.397667 4.1:+66963002 None:intergenic
CAACTGTTCCAATGAGTATA+TGG 0.398189 4.1:-66957503 MS.gene48607:CDS
CTGCATAGAACTCCCTTGCT+TGG 0.411271 4.1:+66957791 None:intergenic
TCGTCTTCTTTGGATCCCTT+TGG 0.422330 4.1:+66957927 None:intergenic
AACTTGATATCATATCTAAC+AGG 0.425289 4.1:-66962111 MS.gene48607:CDS
ACAAATATCCGGTCGTAGAT+GGG 0.426366 4.1:+66957690 None:intergenic
GTTCTGTGACAATATCAATA+AGG 0.432594 4.1:-66957271 MS.gene48607:CDS
CTTGCTGGATTAAGTGTCAT+GGG 0.435853 4.1:-66957222 MS.gene48607:CDS
TGCTTGGAACAAGGACATAT+AGG 0.436907 4.1:-66958391 MS.gene48607:CDS
ATATTCAAGATAACTATAGT+TGG 0.443049 4.1:-66958469 MS.gene48607:CDS
CACAAAGGTATCATCTCATA+AGG 0.449090 4.1:-66957156 None:intergenic
TTGCTAGTGGCACAAATATC+CGG 0.464706 4.1:+66957679 None:intergenic
GAAGCTCATTCTTTAATTGG+TGG 0.474451 4.1:-66958541 MS.gene48607:CDS
TCTACATTCTTCACCAAGCA+AGG 0.478008 4.1:-66957804 MS.gene48607:CDS
ACCAACCACCATATACTCAT+TGG 0.479829 4.1:+66957495 None:intergenic
CCTGCCGTTAGGTCCAAATC+TGG 0.487726 4.1:-66963015 MS.gene48607:CDS
CTGGTTATTGGAGATCTGCT+TGG 0.488542 4.1:-66962996 MS.gene48607:CDS
AAGAATGTGAATATTTGGTC+TGG 0.492102 4.1:-66962057 MS.gene48607:CDS
ACTTGCTGGATTAAGTGTCA+TGG 0.493666 4.1:-66957223 MS.gene48607:CDS
AGCATCTAACAACACTTCGT+TGG 0.504787 4.1:+66963080 None:intergenic
CCCAAATGAACTAAGAAGCA+TGG 0.506573 4.1:-66957397 MS.gene48607:CDS
GTTATCGTTTGAAGAGAGGC+AGG 0.510826 4.1:+66957738 None:intergenic
ATAAAGATGGTCATGAAAGT+TGG 0.510870 4.1:-66957293 MS.gene48607:CDS
TCACTCTATCTAGTTGCCAT+TGG 0.515187 4.1:-66958644 MS.gene48607:CDS
TACTATGGTTGCAGGTGCCA+CGG 0.515339 4.1:-66958513 MS.gene48607:CDS
CTTCTAGCTATATGCTCCTC+GGG 0.515744 4.1:+66958560 None:intergenic
TAATATAATTTACAGGGACT+AGG 0.523704 4.1:-66958743 MS.gene48607:intron
ACAGAGGACAACCTGCCGTT+AGG 0.526080 4.1:-66963026 MS.gene48607:CDS
AAAGAAAACAATGGCGACAT+TGG 0.528764 4.1:+66957716 None:intergenic
GTTATGTTTAGGTGTGGAAG+TGG 0.532182 4.1:-66962166 MS.gene48607:intron
ACACGGCCGATTCTAAGAAA+AGG 0.535424 4.1:+66958341 None:intergenic
TTGCTTCAAAGAATTGGCAC+TGG 0.536263 4.1:-66957624 MS.gene48607:CDS
TATTTGAGTATTGTTGGTGT+TGG 0.547399 4.1:-66957363 MS.gene48607:CDS
CCAAATGAACTAAGAAGCAT+GGG 0.552681 4.1:-66957396 MS.gene48607:CDS
GTTGCAGTGCTCTGTTTGAG+TGG 0.553241 4.1:+66962087 None:intergenic
AAGAAGCAAAGGCAGTACTA+AGG 0.553947 4.1:-66957881 MS.gene48607:CDS
ATTATCACTGGAAAACCCTC+AGG 0.554862 4.1:-66957654 MS.gene48607:CDS
TCCAATGAGTATATGGTGGT+TGG 0.556157 4.1:-66957496 MS.gene48607:CDS
TTACAGCTGCAACGAATACA+CGG 0.559250 4.1:+66958324 None:intergenic
CCAGTGATAATTCTTGCTAG+TGG 0.559402 4.1:+66957666 None:intergenic
CAGTGAGATCGAAGAAGCAA+AGG 0.559693 4.1:-66957892 MS.gene48607:CDS
GCCCCAAAAGCTTGAACACA+AGG 0.560276 4.1:+66958605 None:intergenic
AGCAAAGGCAGTACTAAGGT+TGG 0.564362 4.1:-66957877 MS.gene48607:CDS
AGAAAGCACCTAACAGAGGA+AGG 0.567984 4.1:+66962022 None:intergenic
CCACTAGCAAGAATTATCAC+TGG 0.568272 4.1:-66957666 MS.gene48607:CDS
GCTTCTAGCTATATGCTCCT+CGG 0.569783 4.1:+66958559 None:intergenic
TCTTTAGCCCCATCTACGAC+CGG 0.571252 4.1:-66957698 MS.gene48607:CDS
CAAGGGCAGGTTCCTCAACA+TGG 0.573606 4.1:-66957961 MS.gene48607:intron
GGTGTTGGAAGCTTTCTAAG+TGG 0.575161 4.1:-66957348 MS.gene48607:CDS
TTGCTGGATTAAGTGTCATG+GGG 0.576133 4.1:-66957221 MS.gene48607:CDS
TTTATGTCCACCTTGTCCAA+TGG 0.576173 4.1:+66958628 None:intergenic
GTAGAACAAGATGTGAGTGA+AGG 0.576984 4.1:+66958695 None:intergenic
CCAGATTTGGACCTAACGGC+AGG 0.579651 4.1:+66963015 None:intergenic
ACAGCGGATATTGAAGAGGA+TGG 0.580451 4.1:-66958278 MS.gene48607:CDS
ATTGGTTATCGTTTGAAGAG+AGG 0.586290 4.1:+66957734 None:intergenic
TATCTAGTTGCCATTGGACA+AGG 0.587068 4.1:-66958638 MS.gene48607:CDS
CTACATTCTTCACCAAGCAA+GGG 0.587319 4.1:-66957803 MS.gene48607:CDS
ATGGCATTGCTAAAACCAAA+GGG 0.587457 4.1:-66957942 MS.gene48607:CDS
CAAATATCCGGTCGTAGATG+GGG 0.603716 4.1:+66957691 None:intergenic
TCTTGAATATAAGTCAAGAT+CGG 0.606815 4.1:+66958482 None:intergenic
CATGGCATTGCTAAAACCAA+AGG 0.607241 4.1:-66957943 MS.gene48607:CDS
TGAAGCAATGTGATGCCTGA+GGG 0.609507 4.1:+66957639 None:intergenic
TAGGTGTGGAAGTGGCAGAG+AGG 0.610679 4.1:-66962158 MS.gene48607:CDS
ATCAACAGCGGATATTGAAG+AGG 0.620450 4.1:-66958282 MS.gene48607:CDS
ATAACCAGATTTGGACCTAA+CGG 0.623405 4.1:+66963011 None:intergenic
GCAAAGAAAGCACCTAACAG+AGG 0.639255 4.1:+66962018 None:intergenic
CAAGATCGGAAGTGTTGCCG+TGG 0.640514 4.1:+66958496 None:intergenic
TTGAAGCAATGTGATGCCTG+AGG 0.641335 4.1:+66957638 None:intergenic
GCAGGAGGTATGTCGAAACC+AGG 0.642425 4.1:+66957756 None:intergenic
TCTTACATTTATAATCACAA+AGG 0.646420 4.1:-66957171 MS.gene48607:CDS
GAGAAGCAAGTATGATTGTG+CGG 0.648087 4.1:+66961974 None:intergenic
CTAGTTGCCATTGGACAAGG+TGG 0.650474 4.1:-66958635 MS.gene48607:CDS
ATCGTTTGAAGAGAGGCAGG+AGG 0.679134 4.1:+66957741 None:intergenic
GATGGGGCTAAAGAAAACAA+TGG 0.689663 4.1:+66957707 None:intergenic
GCGAAACACCTTATCAACAG+CGG 0.714560 4.1:-66958294 MS.gene48607:CDS
CTGTTCCAATGAGTATATGG+TGG 0.715883 4.1:-66957500 MS.gene48607:CDS
GATGGAGTCGTTGACTACAG+AGG 0.727981 4.1:-66963042 MS.gene48607:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACATATATAATTAATTG+TGG + chr4.1:66961397-66961416 None:intergenic 10.0%
!! CAATTAATTATATATGTTAT+AGG - chr4.1:66961397-66961416 MS.gene48607:intron 10.0%
!! TAAATTAATCCATATTAAAA+TGG + chr4.1:66957737-66957756 None:intergenic 10.0%
!! TTCAATGAATTTAAAAAAAA+TGG + chr4.1:66960258-66960277 None:intergenic 10.0%
!!! ATTTTGTTTATATTTCATAT+CGG + chr4.1:66958773-66958792 None:intergenic 10.0%
!! AAAAAAAAAAACAATGTAGA+TGG + chr4.1:66960309-66960328 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr4.1:66960011-66960030 None:intergenic 15.0%
!! AAGATGATATAAAATTGATT+TGG + chr4.1:66957697-66957716 None:intergenic 15.0%
!! AATGATTAAAAGAAAAAGAA+TGG + chr4.1:66960048-66960067 None:intergenic 15.0%
!! AATGTGAAAAGTAAATATAT+AGG + chr4.1:66958023-66958042 None:intergenic 15.0%
!! ATGTATGTTTAGAAATTATT+CGG - chr4.1:66960532-66960551 MS.gene48607:intron 15.0%
!! ATTATAGGAAAATATGTTTA+AGG - chr4.1:66958668-66958687 MS.gene48607:CDS 15.0%
!! ATTTATACTATATTTCATTC+CGG - chr4.1:66959021-66959040 MS.gene48607:intron 15.0%
!! CAACAATATAACATTATTAT+AGG - chr4.1:66958653-66958672 MS.gene48607:CDS 15.0%
!! CAGATACATTAAAAAAAAAA+GGG - chr4.1:66961434-66961453 MS.gene48607:intron 15.0%
!! CTATAATAATGTTATATTGT+TGG + chr4.1:66958655-66958674 None:intergenic 15.0%
!! GTTAATAAGGATAATTTAAT+TGG - chr4.1:66960014-66960033 MS.gene48607:intron 15.0%
!! TCAGATACATTAAAAAAAAA+AGG - chr4.1:66961433-66961452 MS.gene48607:intron 15.0%
!! TTATAGGAAAATATGTTTAA+GGG - chr4.1:66958669-66958688 MS.gene48607:CDS 15.0%
!!! AATTATGTGATTTTCTTAAA+CGG + chr4.1:66957406-66957425 None:intergenic 15.0%
!!! ATATCATATTTTGGAATTAA+GGG - chr4.1:66958113-66958132 MS.gene48607:intron 15.0%
!!! ATTTGGTTTTTTTAATTGTT+GGG - chr4.1:66957905-66957924 MS.gene48607:CDS 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr4.1:66959884-66959903 None:intergenic 15.0%
!!! GTCACTTATTTTAAAATAAA+AGG - chr4.1:66960182-66960201 MS.gene48607:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr4.1:66959987-66960006 None:intergenic 15.0%
!!! TTTTTGCAACAAATAATTTA+AGG + chr4.1:66959376-66959395 None:intergenic 15.0%
!! AAACTAACCAATAGTTAATA+AGG - chr4.1:66960001-66960020 MS.gene48607:intron 20.0%
!! AATTCTCATCACAATTTAAA+AGG + chr4.1:66958046-66958065 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr4.1:66959924-66959943 None:intergenic 20.0%
!! ATATTCAAGATAACTATAGT+TGG - chr4.1:66961779-66961798 MS.gene48607:intron 20.0%
!! GAAATATAAACGTAAAAAGT+AGG + chr4.1:66958871-66958890 None:intergenic 20.0%
!! GAATATTGTATATTATATGC+AGG + chr4.1:66959304-66959323 None:intergenic 20.0%
!! GAGTATTAAATAAAGACAAA+TGG + chr4.1:66959832-66959851 None:intergenic 20.0%
!! GTAAATGCAAGTAAAAAAAA+AGG - chr4.1:66959448-66959467 MS.gene48607:intron 20.0%
!! TAACAAAATTTAGTTGAGTT+GGG + chr4.1:66957634-66957653 None:intergenic 20.0%
!! TCAATACAAAATGATAACTA+TGG + chr4.1:66958582-66958601 None:intergenic 20.0%
!! TCTTACATTTATAATCACAA+AGG - chr4.1:66963077-66963096 MS.gene48607:CDS 20.0%
!! TGCATTTACAAAACAAAATT+AGG + chr4.1:66959437-66959456 None:intergenic 20.0%
!! TTAATTAATAGCGACAATAA+AGG - chr4.1:66957310-66957329 MS.gene48607:CDS 20.0%
!! TTCAAAATTGTAGTATTCAA+AGG - chr4.1:66959520-66959539 MS.gene48607:intron 20.0%
!! TTGGCTTAATATAATTTACA+GGG - chr4.1:66961499-66961518 MS.gene48607:intron 20.0%
!! TTTACGTTTATATTTCATTC+CGG - chr4.1:66958875-66958894 MS.gene48607:intron 20.0%
!!! ACATAGTATTTTAATGTGAA+AGG + chr4.1:66959501-66959520 None:intergenic 20.0%
!!! AGGTTAATTAGTTTGTTATT+TGG + chr4.1:66960471-66960490 None:intergenic 20.0%
!!! ATGATATAAAATTGATTTGG+TGG + chr4.1:66957694-66957713 None:intergenic 20.0%
!!! ATTGGCTTAATATAATTTAC+AGG - chr4.1:66961498-66961517 MS.gene48607:intron 20.0%
!!! GAATATTTTAGTGATAAAGA+TGG - chr4.1:66962942-66962961 MS.gene48607:intron 20.0%
!!! GATATCATATTTTGGAATTA+AGG - chr4.1:66958112-66958131 MS.gene48607:intron 20.0%
!!! GATTTGGTTTTTTTAATTGT+TGG - chr4.1:66957904-66957923 MS.gene48607:CDS 20.0%
!!! TGAATTAGACCATTTTAATA+TGG - chr4.1:66957725-66957744 MS.gene48607:CDS 20.0%
!!! TTTGATTGTATTTTCAACAA+GGG - chr4.1:66962270-66962289 MS.gene48607:intron 20.0%
!!! TTTGGTTTTTTTAATTGTTG+GGG - chr4.1:66957906-66957925 MS.gene48607:CDS 20.0%
!!! TTTTGAAAAGTATTTCAAAC+AGG + chr4.1:66957811-66957830 None:intergenic 20.0%
!!! TTTTTACTTATAACAGTCAT+CGG + chr4.1:66960234-66960253 None:intergenic 20.0%
! AAAATTGTAGTATTCAAAGG+AGG - chr4.1:66959523-66959542 MS.gene48607:intron 25.0%
! AACTTGATATCATATCTAAC+AGG - chr4.1:66958137-66958156 MS.gene48607:intron 25.0%
! AATTGTGATGAGAATTGAAA+TGG - chr4.1:66958050-66958069 MS.gene48607:intron 25.0%
! ACAAAGAAAATAGCATGTTT+CGG + chr4.1:66958721-66958740 None:intergenic 25.0%
! ACATTCTGTTTATTTCCATT+TGG + chr4.1:66962225-66962244 None:intergenic 25.0%
! AGTATGATATATCAATCAAG+TGG - chr4.1:66961371-66961390 MS.gene48607:intron 25.0%
! CATTCTGTTTATTTCCATTT+GGG + chr4.1:66962224-66962243 None:intergenic 25.0%
! GACATATAGGTTTAACATTA+AGG - chr4.1:66961870-66961889 MS.gene48607:intron 25.0%
! GACATTGCATAATATATGTT+GGG + chr4.1:66960405-66960424 None:intergenic 25.0%
! GGATTATGAATGTTATGTTT+AGG - chr4.1:66958071-66958090 MS.gene48607:intron 25.0%
! GTAACAAAATTTAGTTGAGT+TGG + chr4.1:66957635-66957654 None:intergenic 25.0%
! GTTAGGATATGTAGAATAAA+GGG + chr4.1:66961187-66961206 None:intergenic 25.0%
! TAATATAATTTACAGGGACT+AGG - chr4.1:66961505-66961524 MS.gene48607:intron 25.0%
! TCGATAATTTATACTTCTTC+CGG + chr4.1:66958897-66958916 None:intergenic 25.0%
! TCTTGAATATAAGTCAAGAT+CGG + chr4.1:66961769-66961788 None:intergenic 25.0%
! TGTTAGGATATGTAGAATAA+AGG + chr4.1:66961188-66961207 None:intergenic 25.0%
! TTGTTTATATTTCATATCGG+AGG + chr4.1:66958770-66958789 None:intergenic 25.0%
!! ATCATAATCTGGTGAATTTT+AGG - chr4.1:66960972-66960991 MS.gene48607:intron 25.0%
!! CTTTGATTGTATTTTCAACA+AGG - chr4.1:66962269-66962288 MS.gene48607:intron 25.0%
!! GTGTCTTTAAAAAATATCAC+TGG - chr4.1:66959180-66959199 MS.gene48607:intron 25.0%
!! TAGAGAATTTGATTTAAGTG+AGG + chr4.1:66960491-66960510 None:intergenic 25.0%
!! TAGTCTTTTAATCTCAACAA+AGG + chr4.1:66962685-66962704 None:intergenic 25.0%
!! TCATAATCTGGTGAATTTTA+GGG - chr4.1:66960973-66960992 MS.gene48607:intron 25.0%
!! TGAATTGTTCAGATTTTTGA+CGG + chr4.1:66962005-66962024 None:intergenic 25.0%
!! TGGCTAAAATTCACATTTTA+AGG - chr4.1:66960344-66960363 MS.gene48607:intron 25.0%
!!! AAACAAAAAGTGTTTCAAAC+AGG - chr4.1:66957996-66958015 MS.gene48607:intron 25.0%
!!! AATTTCTGAGGTTTTTACTA+TGG - chr4.1:66962797-66962816 MS.gene48607:intron 25.0%
!!! ACCACTTGTTTTTTTTTTTG+GGG - chr4.1:66959203-66959222 MS.gene48607:intron 25.0%
!!! ATAAGTTTTGAAGAGAGATT+TGG - chr4.1:66957888-66957907 MS.gene48607:CDS 25.0%
!!! ATTCCAAACAAAAAGTATTG+AGG + chr4.1:66962780-66962799 None:intergenic 25.0%
!!! CACATCTTGATTACTTTTAT+TGG - chr4.1:66963000-66963019 MS.gene48607:CDS 25.0%
!!! GACCACTTGTTTTTTTTTTT+GGG - chr4.1:66959202-66959221 MS.gene48607:intron 25.0%
!!! TAATTGGTGGTATTTTACTA+TGG - chr4.1:66961720-66961739 MS.gene48607:intron 25.0%
!!! TATTTTAATGTGAAAGGTCT+AGG + chr4.1:66959495-66959514 None:intergenic 25.0%
!!! TTTGTTATTTGGATTTGTCA+AGG + chr4.1:66960460-66960479 None:intergenic 25.0%
!!! TTTTTGTTTATAACAGTGAC+CGG - chr4.1:66961344-66961363 MS.gene48607:intron 25.0%
AAATACATCAATGTCCCAAA+TGG - chr4.1:66962207-66962226 MS.gene48607:intron 30.0%
AAGAATGTGAATATTTGGTC+TGG - chr4.1:66958191-66958210 MS.gene48607:intron 30.0%
AGCTAATAACAATGACAAGA+GGG + chr4.1:66961240-66961259 None:intergenic 30.0%
AGTTGAAAAGTCAATGTACA+TGG - chr4.1:66958813-66958832 MS.gene48607:intron 30.0%
ATAAAGATGGTCATGAAAGT+TGG - chr4.1:66962955-66962974 MS.gene48607:intron 30.0%
ATAATGAAAGATCGTGTGTT+AGG + chr4.1:66961204-66961223 None:intergenic 30.0%
ATCACATTGCTTCAAAGAAT+TGG - chr4.1:66962618-66962637 MS.gene48607:intron 30.0%
ATCATGACAATTGTACATGT+TGG - chr4.1:66960858-66960877 MS.gene48607:intron 30.0%
ATGAATGTTATGTTTAGGTG+TGG - chr4.1:66958076-66958095 MS.gene48607:intron 30.0%
ATTATTCGGTTTAACCTAAG+AGG - chr4.1:66960546-66960565 MS.gene48607:intron 30.0%
CAAATGGTCAAGTATATCAA+AGG + chr4.1:66959816-66959835 None:intergenic 30.0%
CATAATATATGTTGGGATCA+GGG + chr4.1:66960398-66960417 None:intergenic 30.0%
CATGTACAATTGTCATGATA+AGG + chr4.1:66960857-66960876 None:intergenic 30.0%
CTAGAAGCTCATTCTTTAAT+TGG - chr4.1:66961704-66961723 MS.gene48607:intron 30.0%
CTATTTGATGAAATTCACGT+GGG - chr4.1:66959599-66959618 MS.gene48607:intron 30.0%
CTGCTAAGAATGTGAATATT+TGG - chr4.1:66958186-66958205 MS.gene48607:intron 30.0%
CTTTGAATGCAAGAAATGTT+AGG + chr4.1:66959727-66959746 None:intergenic 30.0%
GATAACTATAGTTGGATTCT+TGG - chr4.1:66961787-66961806 MS.gene48607:intron 30.0%
GATATATAATCGTTTAGCAG+CGG + chr4.1:66957543-66957562 None:intergenic 30.0%
GCTCTTTGAACTTTGATATT+TGG - chr4.1:66957584-66957603 MS.gene48607:CDS 30.0%
GGACATTGCATAATATATGT+TGG + chr4.1:66960406-66960425 None:intergenic 30.0%
GTATATTATATGCAGGAGTT+GGG + chr4.1:66959297-66959316 None:intergenic 30.0%
GTTCTGTGACAATATCAATA+AGG - chr4.1:66962977-66962996 MS.gene48607:intron 30.0%
TAGCTAATAACAATGACAAG+AGG + chr4.1:66961241-66961260 None:intergenic 30.0%
TATAGTTGGATTCTTGGATT+TGG - chr4.1:66961793-66961812 MS.gene48607:intron 30.0%
TATATTATATGCAGGAGTTG+GGG + chr4.1:66959296-66959315 None:intergenic 30.0%
TCTATTTGATGAAATTCACG+TGG - chr4.1:66959598-66959617 MS.gene48607:intron 30.0%
TCTCTTATCTACATATTGGT+TGG - chr4.1:66958293-66958312 MS.gene48607:CDS 30.0%
TGCTTCTCTTATCTACATAT+TGG - chr4.1:66958289-66958308 MS.gene48607:CDS 30.0%
TGTATATTATATGCAGGAGT+TGG + chr4.1:66959298-66959317 None:intergenic 30.0%
TTAATAGCGACAATAAAGGT+TGG - chr4.1:66957314-66957333 MS.gene48607:CDS 30.0%
! AAGAGTCCTTTTCTTAGAAT+CGG - chr4.1:66961901-66961920 MS.gene48607:intron 30.0%
! GACAATCAATTTTCTTGTTC+CGG + chr4.1:66961077-66961096 None:intergenic 30.0%
! GTGATTTTCTTAAACGGTAT+CGG + chr4.1:66957400-66957419 None:intergenic 30.0%
! TAAGTTTACCTCAGTTGATA+AGG + chr4.1:66960427-66960446 None:intergenic 30.0%
! TATTTGAGTATTGTTGGTGT+TGG - chr4.1:66962885-66962904 MS.gene48607:intron 30.0%
! TGGGTATCAAACTTTGAAAA+TGG - chr4.1:66959618-66959637 MS.gene48607:intron 30.0%
! TTTAAGGCAATGATAACAAG+TGG + chr4.1:66959360-66959379 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr4.1:66960097-66960116 MS.gene48607:intron 30.0%
!! AGAACTCACACATTTTAATG+TGG - chr4.1:66959245-66959264 MS.gene48607:intron 30.0%
!! CTTTTTGTTTGGAATTTCTG+AGG - chr4.1:66962785-66962804 MS.gene48607:intron 30.0%
!! GTTCCTCAATACTTTTTGTT+TGG - chr4.1:66962774-66962793 MS.gene48607:intron 30.0%
!!! CCACTTGTTTTTTTTTTTGG+GGG - chr4.1:66959204-66959223 MS.gene48607:intron 30.0%
!!! GGACCACTTGTTTTTTTTTT+TGG - chr4.1:66959201-66959220 MS.gene48607:intron 30.0%
!!! GTGAACAAGTGAGTTTTTTA+GGG - chr4.1:66960366-66960385 MS.gene48607:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr4.1:66960096-66960115 None:intergenic 30.0%
!!! TTCTTTGCTGATTCTTTTCT+TGG - chr4.1:66958245-66958264 MS.gene48607:CDS 30.0%
!!! TTTTTTGTCAAGTAGTCTAG+TGG - chr4.1:66960324-66960343 MS.gene48607:intron 30.0%
AAAATGGATCCCACATAAAG+TGG - chr4.1:66959634-66959653 MS.gene48607:intron 35.0%
AAAGAAAACAATGGCGACAT+TGG + chr4.1:66962535-66962554 None:intergenic 35.0%
AATGTGAGATCTTGTGTTGA+GGG + chr4.1:66961159-66961178 None:intergenic 35.0%
AATTCACCAGATTATGATGC+AGG + chr4.1:66960970-66960989 None:intergenic 35.0%
ACACTTCTTACCCTAAACTT+GGG + chr4.1:66960771-66960790 None:intergenic 35.0%
AGATCTCCAATAACCAGATT+TGG + chr4.1:66957249-66957268 None:intergenic 35.0%
AGATCTGCTTGGTTTATCAT+AGG - chr4.1:66957263-66957282 MS.gene48607:CDS 35.0%
ATAAAGTGGTTAGACGTACA+TGG - chr4.1:66959648-66959667 MS.gene48607:intron 35.0%
ATAACCAGATTTGGACCTAA+CGG + chr4.1:66957240-66957259 None:intergenic 35.0%
ATACCTATGAAGCACAAACA+CGG - chr4.1:66957356-66957375 MS.gene48607:CDS 35.0%
ATGCAGAAAACAATAGTTCC+TGG - chr4.1:66962474-66962493 MS.gene48607:intron 35.0%
ATGGCATTGCTAAAACCAAA+GGG - chr4.1:66962306-66962325 MS.gene48607:intron 35.0%
ATTGGTTATCGTTTGAAGAG+AGG + chr4.1:66962517-66962536 None:intergenic 35.0%
CAACTGTTCCAATGAGTATA+TGG - chr4.1:66962745-66962764 MS.gene48607:intron 35.0%
CATCAAAACATGAGCCAATA+TGG + chr4.1:66961472-66961491 None:intergenic 35.0%
CATTGAATGAGTGATGTATG+TGG - chr4.1:66961279-66961298 MS.gene48607:intron 35.0%
CCATGCTTCTTAGTTCATTT+GGG + chr4.1:66962854-66962873 None:intergenic 35.0%
CCCCCAAAAAAAAAAACAAG+TGG + chr4.1:66959207-66959226 None:intergenic 35.0%
CCTAAACCCTATATATACCT+AGG + chr4.1:66960816-66960835 None:intergenic 35.0%
CCTAGGTATATATAGGGTTT+AGG - chr4.1:66960813-66960832 MS.gene48607:intron 35.0%
CTAAAAATAGCACAAGAGCA+TGG - chr4.1:66962702-66962721 MS.gene48607:intron 35.0%
CTAAGGCCTAGGTATATATA+GGG - chr4.1:66960807-66960826 MS.gene48607:intron 35.0%
GAAGCTCATTCTTTAATTGG+TGG - chr4.1:66961707-66961726 MS.gene48607:intron 35.0%
GACAATTGTACATGTTGGTA+CGG - chr4.1:66960863-66960882 MS.gene48607:intron 35.0%
GAGGGAGTAGTAGAAAAATA+TGG - chr4.1:66960119-66960138 MS.gene48607:intron 35.0%
GCATAATATATGTTGGGATC+AGG + chr4.1:66960399-66960418 None:intergenic 35.0%
GTATGACTCAGATGAAACTT+TGG - chr4.1:66957606-66957625 MS.gene48607:CDS 35.0%
TAATGTGAGATCTTGTGTTG+AGG + chr4.1:66961160-66961179 None:intergenic 35.0%
TACGTCTAACCACTTTATGT+GGG + chr4.1:66959646-66959665 None:intergenic 35.0%
TACTTATAACAGTCATCGGA+GGG + chr4.1:66960230-66960249 None:intergenic 35.0%
TATAGGGTTTAGGTACAACT+TGG - chr4.1:66960823-66960842 MS.gene48607:intron 35.0%
TTACTTATAACAGTCATCGG+AGG + chr4.1:66960231-66960250 None:intergenic 35.0%
TTAGGTCCAAATCTGGTTAT+TGG - chr4.1:66957240-66957259 MS.gene48607:CDS 35.0%
TTCAATATCCGCTGTTGATA+AGG + chr4.1:66961965-66961984 None:intergenic 35.0%
TTGATATATCATACTGCCTC+CGG + chr4.1:66961366-66961385 None:intergenic 35.0%
! AAACCTTGTGTTCAAGCTTT+TGG - chr4.1:66961640-66961659 MS.gene48607:intron 35.0%
! AACCTTGTGTTCAAGCTTTT+GGG - chr4.1:66961641-66961660 MS.gene48607:intron 35.0%
! ACTAAGGTTGGTTCCAATTT+GGG - chr4.1:66962383-66962402 MS.gene48607:intron 35.0%
! ATTGTATTTTCAACAAGGGC+AGG - chr4.1:66962274-66962293 MS.gene48607:intron 35.0%
! CCAAATGAACTAAGAAGCAT+GGG - chr4.1:66962852-66962871 MS.gene48607:intron 35.0%
! GCACTCTATTTGAGTATTGT+TGG - chr4.1:66962879-66962898 MS.gene48607:intron 35.0%
! GCAGAGAGGATATCATATTT+TGG - chr4.1:66958104-66958123 MS.gene48607:intron 35.0%
! GCTTTGATTGTTTTCTTGCT+TGG - chr4.1:66961841-66961860 MS.gene48607:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr4.1:66959962-66959981 None:intergenic 35.0%
! TACTAAGGTTGGTTCCAATT+TGG - chr4.1:66962382-66962401 MS.gene48607:intron 35.0%
! TCGACAATGTCACCTATTTT+GGG + chr4.1:66959762-66959781 None:intergenic 35.0%
! TGGTATTTTACTATGGTTGC+AGG - chr4.1:66961727-66961746 MS.gene48607:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr4.1:66959958-66959977 None:intergenic 35.0%
! TTGTTTTCTTGCTTGGAACA+AGG - chr4.1:66961848-66961867 MS.gene48607:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr4.1:66959858-66959877 None:intergenic 35.0%
!! ACTAGAGAGTGTTAGAAAGA+AGG + chr4.1:66959562-66959581 None:intergenic 35.0%
!! CACATTTTAATGTGGAGAAG+TGG - chr4.1:66959253-66959272 MS.gene48607:intron 35.0%
!! TACTTTTATTGGCTACTTGC+TGG - chr4.1:66963011-66963030 MS.gene48607:CDS 35.0%
!! TCTGAGGTTTTTACTATGGT+TGG - chr4.1:66962801-66962820 MS.gene48607:intron 35.0%
!!! ATTGGCTCATGTTTTGATGT+TGG - chr4.1:66961473-66961492 MS.gene48607:intron 35.0%
!!! CATGTTTTGATGTTGGTCAT+TGG - chr4.1:66961480-66961499 MS.gene48607:intron 35.0%
!!! GGTGAACAAGTGAGTTTTTT+AGG - chr4.1:66960365-66960384 MS.gene48607:intron 35.0%
AAGAAGCAAAGGCAGTACTA+AGG - chr4.1:66962367-66962386 MS.gene48607:intron 40.0%
AAGTAAGTGAGAGGTTCATG+AGG - chr4.1:66960739-66960758 MS.gene48607:intron 40.0%
ACAAATATCCGGTCGTAGAT+GGG + chr4.1:66962561-66962580 None:intergenic 40.0%
ACACTGGAAAGTGGACAATA+TGG - chr4.1:66957784-66957803 MS.gene48607:CDS 40.0%
ACCAAAGTTGTAGCCCAAAT+TGG + chr4.1:66962399-66962418 None:intergenic 40.0%
ACCAACCACCATATACTCAT+TGG + chr4.1:66962756-66962775 None:intergenic 40.0%
ACTACAAGTCTCGTCTTCTT+TGG + chr4.1:66962334-66962353 None:intergenic 40.0%
AGCATCTAACAACACTTCGT+TGG + chr4.1:66957171-66957190 None:intergenic 40.0%
ATATAATCGTTTAGCAGCGG+CGG + chr4.1:66957540-66957559 None:intergenic 40.0%
ATCAACAGCGGATATTGAAG+AGG - chr4.1:66961966-66961985 MS.gene48607:CDS 40.0%
ATTATCACTGGAAAACCCTC+AGG - chr4.1:66962594-66962613 MS.gene48607:intron 40.0%
ATTCGACGAAAAATATCCCG+AGG - chr4.1:66961672-66961691 MS.gene48607:intron 40.0%
CACTGGAAAGTGGACAATAT+GGG - chr4.1:66957785-66957804 MS.gene48607:CDS 40.0%
CATGAACCTCTCACTTACTT+GGG + chr4.1:66960739-66960758 None:intergenic 40.0%
CATGGCATTGCTAAAACCAA+AGG - chr4.1:66962305-66962324 MS.gene48607:intron 40.0%
CCACTAGCAAGAATTATCAC+TGG - chr4.1:66962582-66962601 MS.gene48607:intron 40.0%
CCAGTGATAATTCTTGCTAG+TGG + chr4.1:66962585-66962604 None:intergenic 40.0%
CCCAAATGAACTAAGAAGCA+TGG - chr4.1:66962851-66962870 MS.gene48607:intron 40.0%
CCCATGCTTCTTAGTTCATT+TGG + chr4.1:66962855-66962874 None:intergenic 40.0%
CTACATTCTTCACCAAGCAA+GGG - chr4.1:66962445-66962464 MS.gene48607:intron 40.0%
CTCATTGGAACAGTTGCATT+TGG + chr4.1:66962741-66962760 None:intergenic 40.0%
CTGAGATGATAACTTTGGTG+AGG - chr4.1:66960651-66960670 MS.gene48607:intron 40.0%
CTGTTCCAATGAGTATATGG+TGG - chr4.1:66962748-66962767 MS.gene48607:intron 40.0%
CTTGCTGGATTAAGTGTCAT+GGG - chr4.1:66963026-66963045 MS.gene48607:CDS 40.0%
GACACTTCTTACCCTAAACT+TGG + chr4.1:66960772-66960791 None:intergenic 40.0%
GAGAAGCAAGTATGATTGTG+CGG + chr4.1:66958277-66958296 None:intergenic 40.0%
GATGATAACTTTGGTGAGGT+TGG - chr4.1:66960655-66960674 MS.gene48607:intron 40.0%
GATGGGGCTAAAGAAAACAA+TGG + chr4.1:66962544-66962563 None:intergenic 40.0%
GCAAACGACGAATAGTTCAA+CGG + chr4.1:66960612-66960631 None:intergenic 40.0%
GCTAAGGCCTAGGTATATAT+AGG - chr4.1:66960806-66960825 MS.gene48607:intron 40.0%
GGGGACTAAAAAACTGAAAC+AGG - chr4.1:66957925-66957944 MS.gene48607:CDS 40.0%
GTACGTCTAACCACTTTATG+TGG + chr4.1:66959647-66959666 None:intergenic 40.0%
GTAGAACAAGATGTGAGTGA+AGG + chr4.1:66961556-66961575 None:intergenic 40.0%
GTATGGTATCGCATGGTTAA+TGG - chr4.1:66961006-66961025 MS.gene48607:intron 40.0%
GTCTCTGTTAGATACCAATC+AGG - chr4.1:66957442-66957461 MS.gene48607:CDS 40.0%
GTTATGTTTAGGTGTGGAAG+TGG - chr4.1:66958082-66958101 MS.gene48607:intron 40.0%
TATCTAGTTGCCATTGGACA+AGG - chr4.1:66961610-66961629 MS.gene48607:intron 40.0%
TCACTCTATCTAGTTGCCAT+TGG - chr4.1:66961604-66961623 MS.gene48607:intron 40.0%
TCATGAACCTCTCACTTACT+TGG + chr4.1:66960740-66960759 None:intergenic 40.0%
TCCAATGAGTATATGGTGGT+TGG - chr4.1:66962752-66962771 MS.gene48607:intron 40.0%
TCCAATTTGGGCTACAACTT+TGG - chr4.1:66962395-66962414 MS.gene48607:intron 40.0%
TCGTTGCAGCTGTAAGAAAT+TGG - chr4.1:66961932-66961951 MS.gene48607:intron 40.0%
TCTACATTCTTCACCAAGCA+AGG - chr4.1:66962444-66962463 MS.gene48607:intron 40.0%
TGCAATGTCCTTATCAACTG+AGG - chr4.1:66960416-66960435 MS.gene48607:intron 40.0%
TGCTTGGAACAAGGACATAT+AGG - chr4.1:66961857-66961876 MS.gene48607:intron 40.0%
TTACAGCTGCAACGAATACA+CGG + chr4.1:66961927-66961946 None:intergenic 40.0%
TTCGGTTTAACCTAAGAGGA+TGG - chr4.1:66960550-66960569 MS.gene48607:intron 40.0%
TTGCTAGTGGCACAAATATC+CGG + chr4.1:66962572-66962591 None:intergenic 40.0%
TTGCTGGATTAAGTGTCATG+GGG - chr4.1:66963027-66963046 MS.gene48607:CDS 40.0%
TTGCTTCAAAGAATTGGCAC+TGG - chr4.1:66962624-66962643 MS.gene48607:intron 40.0%
TTGTTTATAACAGTGACCGG+AGG - chr4.1:66961347-66961366 MS.gene48607:intron 40.0%
TTTATGTCCACCTTGTCCAA+TGG + chr4.1:66961623-66961642 None:intergenic 40.0%
! ACCTTGTGTTCAAGCTTTTG+GGG - chr4.1:66961642-66961661 MS.gene48607:intron 40.0%
! ACTTGCTGGATTAAGTGTCA+TGG - chr4.1:66963025-66963044 MS.gene48607:CDS 40.0%
! CAGTGCTGAGATGATAACTT+TGG - chr4.1:66960646-66960665 MS.gene48607:intron 40.0%
! GTCGACAATGTCACCTATTT+TGG + chr4.1:66959763-66959782 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr4.1:66959959-66959978 None:intergenic 40.0%
! TGGGCTACAACTTTGGTTTA+TGG - chr4.1:66962402-66962421 MS.gene48607:intron 40.0%
!! CAATGTCACCTATTTTGGGA+CGG + chr4.1:66959758-66959777 None:intergenic 40.0%
!! GATTCTAGTTCCTAACACAC+TGG - chr4.1:66957768-66957787 MS.gene48607:CDS 40.0%
!! GTTTTAGCAATGCCATGTTG+AGG + chr4.1:66962302-66962321 None:intergenic 40.0%
!! TATCGCATGGTTAATGGACT+CGG - chr4.1:66961012-66961031 MS.gene48607:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4.1:66960101-66960120 MS.gene48607:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4.1:66960120-66960101 None:intergenic 40.0%
AAGAGGATGGTTGAGCTACT+TGG - chr4.1:66960563-66960582 MS.gene48607:intron 45.0%
AATGAAGCACATCCACTCCT+CGG + chr4.1:66957479-66957498 None:intergenic 45.0%
ACAGCGGATATTGAAGAGGA+TGG - chr4.1:66961970-66961989 MS.gene48607:CDS 45.0%
AGCAAAGGCAGTACTAAGGT+TGG - chr4.1:66962371-66962390 MS.gene48607:intron 45.0%
AGTAGCTCAACCATCCTCTT+AGG + chr4.1:66960563-66960582 None:intergenic 45.0%
ATACCACTCCGTCCCAAAAT+AGG - chr4.1:66959747-66959766 MS.gene48607:intron 45.0%
CAAATATCCGGTCGTAGATG+GGG + chr4.1:66962560-66962579 None:intergenic 45.0%
CAACCGTGTTTGTGCTTCAT+AGG + chr4.1:66957362-66957381 None:intergenic 45.0%
CACAAATATCCGGTCGTAGA+TGG + chr4.1:66962562-66962581 None:intergenic 45.0%
CAGTGAGATCGAAGAAGCAA+AGG - chr4.1:66962356-66962375 MS.gene48607:intron 45.0%
CTGGTTATTGGAGATCTGCT+TGG - chr4.1:66957252-66957271 MS.gene48607:CDS 45.0%
GCGAAACACCTTATCAACAG+CGG - chr4.1:66961954-66961973 MS.gene48607:intron 45.0%
GTACATGTTGGTACGGATGT+GGG - chr4.1:66960870-66960889 MS.gene48607:intron 45.0%
GTTATCGTTTGAAGAGAGGC+AGG + chr4.1:66962513-66962532 None:intergenic 45.0%
GTTCCTAACACACTGGAAAG+TGG - chr4.1:66957775-66957794 MS.gene48607:CDS 45.0%
TACCAACTGAGCTAAGCTCA+CGG - chr4.1:66959325-66959344 MS.gene48607:intron 45.0%
TATTCGTCGTTTGCCTGGTT+CGG - chr4.1:66960618-66960637 MS.gene48607:intron 45.0%
TCATACCTGACCTAAGGCTA+AGG - chr4.1:66960790-66960809 MS.gene48607:intron 45.0%
TCGTCTTCTTTGGATCCCTT+TGG + chr4.1:66962324-66962343 None:intergenic 45.0%
TGAACTATTCGTCGTTTGCC+TGG - chr4.1:66960613-66960632 MS.gene48607:intron 45.0%
TGAAGCAATGTGATGCCTGA+GGG + chr4.1:66962612-66962631 None:intergenic 45.0%
TGAAGCACAAACACGGTTGT+TGG - chr4.1:66957363-66957382 MS.gene48607:CDS 45.0%
TGTACATGTTGGTACGGATG+TGG - chr4.1:66960869-66960888 MS.gene48607:intron 45.0%
TGTCCACTTTCCAGTGTGTT+AGG + chr4.1:66957781-66957800 None:intergenic 45.0%
TTGAAGCAATGTGATGCCTG+AGG + chr4.1:66962613-66962632 None:intergenic 45.0%
! ACACGGCCGATTCTAAGAAA+AGG + chr4.1:66961910-66961929 None:intergenic 45.0%
! ATGTGTGAGTTCTAGCCACT+AGG + chr4.1:66959238-66959257 None:intergenic 45.0%
! CTTCTAGCTATATGCTCCTC+GGG + chr4.1:66961691-66961710 None:intergenic 45.0%
! GAAGTGTCATACCTGACCTA+AGG - chr4.1:66960784-66960803 MS.gene48607:intron 45.0%
! GCTCAGTTAGCTCTTGTTGA+TGG - chr4.1:66957188-66957207 MS.gene48607:CDS 45.0%
! GCTTCTAGCTATATGCTCCT+CGG + chr4.1:66961692-66961711 None:intergenic 45.0%
! GGTGTTGGAAGCTTTCTAAG+TGG - chr4.1:66962900-66962919 MS.gene48607:intron 45.0%
! TATACCTAGGCCTTAGCCTT+AGG + chr4.1:66960803-66960822 None:intergenic 45.0%
!! AACGGATTAACCCCAACAGA+CGG + chr4.1:66960594-66960613 None:intergenic 45.0%
!! AGAAAGCACCTAACAGAGGA+AGG + chr4.1:66958229-66958248 None:intergenic 45.0%
!! ATCGCATGGTTAATGGACTC+GGG - chr4.1:66961013-66961032 MS.gene48607:intron 45.0%
!! GCAAAGAAAGCACCTAACAG+AGG + chr4.1:66958233-66958252 None:intergenic 45.0%
!! TTGTGTTCAAGCTTTTGGGG+CGG - chr4.1:66961645-66961664 MS.gene48607:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4.1:66960100-66960119 MS.gene48607:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4.1:66960119-66960100 None:intergenic 45.0%
!!! TAAATAAAGATTTATTTTTT+TGG - chr4.1:66958945-66958964 MS.gene48607:intron 5.0%
AACCCCCTTTGTCTCTACCA+GGG + chr4.1:66960693-66960712 None:intergenic 50.0%
AGTCCCTGGTAGAGACAAAG+GGG - chr4.1:66960687-66960706 MS.gene48607:intron 50.0%
AGTGAGAGGTTCATGAGGAG+AGG - chr4.1:66960744-66960763 MS.gene48607:intron 50.0%
ATCAGGACACGCTTTATCCG+AGG - chr4.1:66957459-66957478 MS.gene48607:CDS 50.0%
ATCGTTTGAAGAGAGGCAGG+AGG + chr4.1:66962510-66962529 None:intergenic 50.0%
ATGTGGGTAACCCTTAGTCC+TGG - chr4.1:66960886-66960905 MS.gene48607:intron 50.0%
CAGATTATGATGCAGGCCGA+GGG + chr4.1:66960963-66960982 None:intergenic 50.0%
CAGTCCCTGGTAGAGACAAA+GGG - chr4.1:66960686-66960705 MS.gene48607:intron 50.0%
CCTCTCACTTACTTGGGCAT+CGG + chr4.1:66960733-66960752 None:intergenic 50.0%
CGGATAAAGCGTGTCCTGAT+TGG + chr4.1:66957459-66957478 None:intergenic 50.0%
CTAGTTGCCATTGGACAAGG+TGG - chr4.1:66961613-66961632 MS.gene48607:intron 50.0%
CTGCATAGAACTCCCTTGCT+TGG + chr4.1:66962460-66962479 None:intergenic 50.0%
GAGGAGAGGTCCCAAGTTTA+GGG - chr4.1:66960758-66960777 MS.gene48607:intron 50.0%
GATCTGAGCGGAATCGGATT+GGG - chr4.1:66961039-66961058 MS.gene48607:intron 50.0%
GCCCCAAAAGCTTGAACACA+AGG + chr4.1:66961646-66961665 None:intergenic 50.0%
GGGTTTAGGTACAACTTGGC+TGG - chr4.1:66960827-66960846 MS.gene48607:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr4.1:66959326-66959345 None:intergenic 50.0%
GTTGCAGTGCTCTGTTTGAG+TGG + chr4.1:66958164-66958183 None:intergenic 50.0%
TACTATGGTTGCAGGTGCCA+CGG - chr4.1:66961735-66961754 MS.gene48607:intron 50.0%
TCAGTCCCTGGTAGAGACAA+AGG - chr4.1:66960685-66960704 MS.gene48607:intron 50.0%
TCTTGTTCCGGACTGAGCTA+AGG + chr4.1:66961065-66961084 None:intergenic 50.0%
TCTTTAGCCCCATCTACGAC+CGG - chr4.1:66962550-66962569 MS.gene48607:intron 50.0%
TGAGGAGAGGTCCCAAGTTT+AGG - chr4.1:66960757-66960776 MS.gene48607:intron 50.0%
TGTGGGTAACCCTTAGTCCT+GGG - chr4.1:66960887-66960906 MS.gene48607:intron 50.0%
! ATGTGGAGAAGTGGAGTGTC+CGG - chr4.1:66959262-66959281 MS.gene48607:intron 50.0%
! GATGGAGTCGTTGACTACAG+AGG - chr4.1:66957206-66957225 MS.gene48607:CDS 50.0%
! TTTAGGGTGTGCTCGTCGTA+TGG - chr4.1:66960989-66961008 MS.gene48607:intron 50.0%
!! ACTTGGTTCTGCCGTCTGTT+GGG - chr4.1:66960580-66960599 MS.gene48607:intron 50.0%
!! CATGGTTAATGGACTCGGGT+CGG - chr4.1:66961017-66961036 MS.gene48607:intron 50.0%
!! TACTTGGTTCTGCCGTCTGT+TGG - chr4.1:66960579-66960598 MS.gene48607:intron 50.0%
!!! TCACCTATTTTGGGACGGAG+TGG + chr4.1:66959753-66959772 None:intergenic 50.0%
AAGGTAGCTCCCCAGGACTA+AGG + chr4.1:66960900-66960919 None:intergenic 55.0%
ACAGAGGACAACCTGCCGTT+AGG - chr4.1:66957222-66957241 MS.gene48607:CDS 55.0%
AGGAGTTGGGGTTCGAATCC+CGG + chr4.1:66959284-66959303 None:intergenic 55.0%
AGGTAGCTCCCCAGGACTAA+GGG + chr4.1:66960899-66960918 None:intergenic 55.0%
CAACCCCCTTTGTCTCTACC+AGG + chr4.1:66960694-66960713 None:intergenic 55.0%
CAAGGGCAGGTTCCTCAACA+TGG - chr4.1:66962287-66962306 MS.gene48607:intron 55.0%
CAGCACTGTTCAACCGAACC+AGG + chr4.1:66960634-66960653 None:intergenic 55.0%
CCAGATTATGATGCAGGCCG+AGG + chr4.1:66960964-66960983 None:intergenic 55.0%
CCAGATTTGGACCTAACGGC+AGG + chr4.1:66957236-66957255 None:intergenic 55.0%
CCGATGCCCAAGTAAGTGAG+AGG - chr4.1:66960730-66960749 MS.gene48607:intron 55.0%
CCTCGGCCTGCATCATAATC+TGG - chr4.1:66960961-66960980 MS.gene48607:intron 55.0%
CCTGCCGTTAGGTCCAAATC+TGG - chr4.1:66957233-66957252 MS.gene48607:CDS 55.0%
CTGACCTAAGGCTAAGGCCT+AGG - chr4.1:66960796-66960815 MS.gene48607:intron 55.0%
GACACGCTTTATCCGAGGAG+TGG - chr4.1:66957464-66957483 MS.gene48607:CDS 55.0%
GATTGGGCCTTAGCTCAGTC+CGG - chr4.1:66961055-66961074 MS.gene48607:intron 55.0%
GCTCGTCGTATGGTATCGCA+TGG - chr4.1:66960999-66961018 MS.gene48607:intron 55.0%
GCTGCTCTCCTTCCTCTGTT+AGG - chr4.1:66958218-66958237 MS.gene48607:intron 55.0%
GGATCTGAGCGGAATCGGAT+TGG - chr4.1:66961038-66961057 MS.gene48607:intron 55.0%
GGTAGAGACAAAGGGGGTTG+TGG - chr4.1:66960694-66960713 MS.gene48607:intron 55.0%
GTCCCTGGTAGAGACAAAGG+GGG - chr4.1:66960688-66960707 MS.gene48607:intron 55.0%
GTGGGTAACCCTTAGTCCTG+GGG - chr4.1:66960888-66960907 MS.gene48607:intron 55.0%
GTTGGTTGATCGTCAGTCCC+TGG - chr4.1:66960673-66960692 MS.gene48607:intron 55.0%
TAGGTGTGGAAGTGGCAGAG+AGG - chr4.1:66958090-66958109 MS.gene48607:intron 55.0%
TAGTCCTGGGGAGCTACCTT+CGG - chr4.1:66960900-66960919 MS.gene48607:intron 55.0%
TTGGGGGTCAAGTAGCCTAG+TGG - chr4.1:66959220-66959239 MS.gene48607:intron 55.0%
! GCAGGAGGTATGTCGAAACC+AGG + chr4.1:66962495-66962514 None:intergenic 55.0%
! TGTGGAGAAGTGGAGTGTCC+GGG - chr4.1:66959263-66959282 MS.gene48607:intron 55.0%
!! CAAGATCGGAAGTGTTGCCG+TGG + chr4.1:66961755-66961774 None:intergenic 55.0%
!! CTAGGCCTTAGCCTTAGGTC+AGG + chr4.1:66960798-66960817 None:intergenic 55.0%
!! CTTGGTTCTGCCGTCTGTTG+GGG - chr4.1:66960581-66960600 MS.gene48607:intron 55.0%
CGCCGTGAGCTTAGCTCAGT+TGG + chr4.1:66959330-66959349 None:intergenic 60.0%
CGTGGTCAACCCTCGAACCT+CGG - chr4.1:66960933-66960952 MS.gene48607:intron 60.0%
CTCGAACCTCGGGTAACCCT+CGG - chr4.1:66960944-66960963 MS.gene48607:intron 60.0%
GAGGGTTACCCGAGGTTCGA+GGG + chr4.1:66960945-66960964 None:intergenic 60.0%
GGGTCGGATCTGAGCGGAAT+CGG - chr4.1:66961033-66961052 MS.gene48607:intron 60.0%
GTGGTCAACCCTCGAACCTC+GGG - chr4.1:66960934-66960953 MS.gene48607:intron 60.0%
AGGGTTGACCACGCTCACGC+AGG + chr4.1:66960926-66960945 None:intergenic 65.0%
CGAGGGTTACCCGAGGTTCG+AGG + chr4.1:66960946-66960965 None:intergenic 65.0%
CGTTTAGCAGCGGCGGCTGT+AGG + chr4.1:66957533-66957552 None:intergenic 65.0%
GGACTCGGGTCGGATCTGAG+CGG - chr4.1:66961027-66961046 MS.gene48607:intron 65.0%
ACCACGCTCACGCAGGCCGA+AGG + chr4.1:66960919-66960938 None:intergenic 70.0%
ACCTTCGGCCTGCGTGAGCG+TGG - chr4.1:66960915-66960934 MS.gene48607:intron 70.0%
CAGGCCGAAGGTAGCTCCCC+AGG + chr4.1:66960907-66960926 None:intergenic 70.0%
TGCAGGCCGAGGGTTACCCG+AGG + chr4.1:66960953-66960972 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 66957158 66963112 66957158 ID=MS.gene48607
chr4.1 mRNA 66957158 66963112 66957158 ID=MS.gene48607.t1;Parent=MS.gene48607
chr4.1 exon 66962986 66963112 66962986 ID=MS.gene48607.t1.exon1;Parent=MS.gene48607.t1
chr4.1 CDS 66962986 66963112 66962986 ID=cds.MS.gene48607.t1;Parent=MS.gene48607.t1
chr4.1 exon 66961960 66962177 66961960 ID=MS.gene48607.t1.exon2;Parent=MS.gene48607.t1
chr4.1 CDS 66961960 66962177 66961960 ID=cds.MS.gene48607.t1;Parent=MS.gene48607.t1
chr4.1 exon 66958245 66958750 66958245 ID=MS.gene48607.t1.exon3;Parent=MS.gene48607.t1
chr4.1 CDS 66958245 66958750 66958245 ID=cds.MS.gene48607.t1;Parent=MS.gene48607.t1
chr4.1 exon 66957158 66957974 66957158 ID=MS.gene48607.t1.exon4;Parent=MS.gene48607.t1
chr4.1 CDS 66957158 66957974 66957158 ID=cds.MS.gene48607.t1;Parent=MS.gene48607.t1
Gene Sequence

>MS.gene48607

ATGGCAGAATCCAACGAAGTGTTGTTAGATGCTCAGTTAGCTCTTGTTGATGGAGTCGTTGACTACAGAGGACAACCTGCCGTTAGGTCCAAATCTGGTTATTGGAGATCTGCTTGGTTTATCATAGGTACACAATTTCATATATCTCTTAATTAATTAATAGCGACAATAAAGGTTGGTTTCATAAAGAGTTAGTTTATACCTATGAAGCACAAACACGGTTGTTGGACACTAATACGCCGATACCGTTTAAGAAAATCACATAATTCAATATAAATATACGCGTCTCTGTTAGATACCAATCAGGACACGCTTTATCCGAGGAGTGGATGTGCTTCATTGTCTAGACACTATAAATGCATGAATTCAACTCCTACAGCCGCCGCTGCTAAACGATTATATATCACTCTAAATATAAGTGTCAACGCTCTTTGAACTTTGATATTTGGTATGACTCAGATGAAACTTTGGAACCCAACTCAACTAAATTTTGTTACTAAAAAAATTCTACTATTTAATCTTTCTTATGTCATCCACCAAATCAATTTTATATCATCTTCTGCAGTTTGAATTAGACCATTTTAATATGGATTAATTTATTGCTGCTACAGATTCTAGTTCCTAACACACTGGAAAGTGGACAATATGGGCCTGTTTGAAATACTTTTCAAAATTTTAGTTTTTAAAAACTTAAAAATTAAAAACTTGTTTGATAAACTATTTTTAAAATATAAGTTTTGAAGAGAGATTTGGTTTTTTTAATTGTTGGGGACTAAAAAACTGAAACAGGTAAATTGTGTTTTTGTTTTTAATTTTTGAAACATATTTTGAAAACTAAAAACAAAAAGTGTTTCAAACAGGTCCTATATATTTACTTTTCACATTCCTTTTAAATTGTGATGAGAATTGAAATGGATTATGAATGTTATGTTTAGGTGTGGAAGTGGCAGAGAGGATATCATATTTTGGAATTAAGGGAAACTTGATATCATATCTAACAGGACCACTCAAACAGAGCACTGCAACAGCTGCTAAGAATGTGAATATTTGGTCTGGAACTGCTGCTCTCCTTCCTCTGTTAGGTGCTTTCTTTGCTGATTCTTTTCTTGGACGCTACCGCACAATCATACTTGCTTCTCTTATCTACATATTGGTTGGTTCTGTTCTTTACTTTTTTTAACATTTTCTTTTATTTCTTTACAATTCTAATTCTAATCTATTAAATAATTATTATATTTGACAACAATCATGTTTTACATTTTCTTTTATTTTTTTATTGCGTTCACGCGTGTATATTAACAATGATATTTTATCGAAATTTACGTGTAAATTACAAACAATATTTTATATAATTTTTTTGATATAGATTAAAATTATAAGTATGAATATTTGTGATTTTCAGATGTAACAAACTCAACAAACCATAGTTATCATTTTGTATTGACAACAATAATATTAAAAATATAATAAAATTCTTATTTTTTTTTAATAACACCAACAATATAACATTATTATAGGAAAATATGTTTAAGGGTATAATAAAAAATCAGCTCAAAAGAGCCGAAACATGCTATTTTCTTTGTATATAGTATGATACAAGTATATACTTCCTCCGATATGAAATATAAACAAAATTAATAGTTGACAAAATTAATAGTTGAAAAGTCAATGTACATGGTTAAAAGTTTATCAACATACATCAGATTTTCACCTACTTTTTACGTTTATATTTCATTCCGGAAGAAGTATAAATTATCGAAAAACGTCAACTAATGCTTTAAAGACACTAAATAAAGATTTATTTTTTTGGAAAATGTGTATTCAACTTTTTTAACGTTTTAAAATTTTTATTTTCAGTAAAAAATTTATACTATATTTCATTCCGGAAGAAGTATAAATTATCGAAAAACGTCAACTAATGCTTTAAAGACACTAAATAAAGATTTATTTTTTTGGAAAATGTGTATTCAACTTTTTTAACGTTTTAAAATTTTTATTTTCAGTAAAAAATTTATACTTTTAGTGTCTTTAAAAAATATCACTGGACCACTTGTTTTTTTTTTTGGGGGTCAAGTAGCCTAGTGGCTAGAACTCACACATTTTAATGTGGAGAAGTGGAGTGTCCGGGATTCGAACCCCAACTCCTGCATATAATATACAATATTCCTACCAACTGAGCTAAGCTCACGGCGATTTGAACCACTTGTTATCATTGCCTTAAATTATTTGTTGCAAAAATCTTTTTGTGTTTCTCAATTTTTCTATATGACAAGTGTCCTAATTTTGTTTTGTAAATGCAAGTAAAAAAAAAGGTAACAATTACACAATTTTTCTCCTAGACCTTTCACATTAAAATACTATGTTCAAAATTGTAGTATTCAAAGGAGGAGTGTTATAGATACCTTCTTTCTAACACTCTCTAGTCTCTAATATTCACTCTTCTATTTGATGAAATTCACGTGGGTATCAAACTTTGAAAATGGATCCCACATAAAGTGGTTAGACGTACATGGATTTCACTCGATATGAGAGTGATTGTTAGAGAGAGTGCTAGAAAAAGAGTGTTCCTAACATTTCTTGCATTCAAAGATACCACTCCGTCCCAAAATAGGTGACATTGTCGACTGTTGCACACATGTCAATGCACATCTTTGACCTTTGATATACTTGACCATTTGTCTTTATTTAATACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAATTTGTTTCAAAATGAATGTTGCTTTCATTTTCCAATGCAATAATAACTTTTTCTTTTCAATTTTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTAATTGGTAAAGTAACCATTCTTTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTAGTAGAAAAATATGGATAAAGTATGTTATATGAATAATGCACATAGTCTCACAATGTCACTTATTTTAAAATAAAAGGAGTACACTCTAATTTTAATACTCCCTCCGATGACTGTTATAAGTAAAAAACCATTTTTTTTAAATTCATTGAATAATTGATGTATCTGATCTATATATAGACCATCTACATTGTTTTTTTTTTTTGTCAAGTAGTCTAGTGGCTAAAATTCACATTTTAAGGTGAACAAGTGAGTTTTTTAGGGTTCGAACCCTGATCCCAACATATATTATGCAATGTCCTTATCAACTGAGGTAAACTTATAGAGAATTTCCTTGACAAATCCAAATAACAAACTAATTAACCTCACTTAAATCAAATTCTCTAATTATGAGAGAAATTTTCAAAATGTATGTTTAGAAATTATTCGGTTTAACCTAAGAGGATGGTTGAGCTACTTGGTTCTGCCGTCTGTTGGGGTTAATCCGTTGAACTATTCGTCGTTTGCCTGGTTCGGTTGAACAGTGCTGAGATGATAACTTTGGTGAGGTTGGTTGATCGTCAGTCCCTGGTAGAGACAAAGGGGGTTGTGGTCATGCACATGTTCCGATGCCCAAGTAAGTGAGAGGTTCATGAGGAGAGGTCCCAAGTTTAGGGTAAGAAGTGTCATACCTGACCTAAGGCTAAGGCCTAGGTATATATAGGGTTTAGGTACAACTTGGCTGGCAAACCTTATCATGACAATTGTACATGTTGGTACGGATGTGGGTAACCCTTAGTCCTGGGGAGCTACCTTCGGCCTGCGTGAGCGTGGTCAACCCTCGAACCTCGGGTAACCCTCGGCCTGCATCATAATCTGGTGAATTTTAGGGTGTGCTCGTCGTATGGTATCGCATGGTTAATGGACTCGGGTCGGATCTGAGCGGAATCGGATTGGGCCTTAGCTCAGTCCGGAACAAGAAAATTGATTGTCTGTATTAGTTATATATTGATTTAACTTTGTGCACTATTTTCTTCACTATTTGTTGTACTCCCTCAACACAAGATCTCACATTAGTTTCCCTTTATTCTACATATCCTAACACACGATCTTTCATTATCTTGATGTATACTCCCTCTTGTCATTGTTATTAGCTAAAAACTACTTTTTAGATTCATTGAATGAGTGATGTATGTGGTAGACAACATACATCATTTATTTATTGAATCTAAAAAGTAGTTTTTTGTTTATAACAGTGACCGGAGGCAGTATGATATATCAATCAAGTGGCCACAATTAATTATATATGTTATAGGAACTTTAACGATTTCAGATACATTAAAAAAAAAAGGGATAGACAGATAGCCATATTGGCTCATGTTTTGATGTTGGTCATTGGCTTAATATAATTTACAGGGACTAGGCTTGTTAACATTTTCAACTATGCTTCCTTCACTCACATCTTGTTCTACTCAATCACAAGTAATCTTATTCTTCATCTCACTCTATCTAGTTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTTGGGGCGGATCAATTCGACGAAAAATATCCCGAGGAGCATATAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACTATGGTTGCAGGTGCCACGGCAACACTTCCGATCTTGACTTATATTCAAGATAACTATAGTTGGATTCTTGGATTTGGAATCTCTTGTGTTGTAATGATCATTGCTTTGATTGTTTTCTTGCTTGGAACAAGGACATATAGGTTTAACATTAAGGATAATAATAAGAGTCCTTTTCTTAGAATCGGCCGTGTATTCGTTGCAGCTGTAAGAAATTGGCGAAACACCTTATCAACAGCGGATATTGAAGAGGATGGACTACTTCGCCGTCAAAAATCTGAACAATTCAAGTAAGAATAAAAATGCTTATTTCTGCTTGTTTTGAAATTCTGTGTCTAGTAACTAAATTTTGTTAATATAATTAGTAGCATTCTGAAAGTAGAACATATGACATACATTATATAGTTCATCTTGTTTTTGTCTTCAGTTTTTAAAGTCACTCTTTGAGCTTTATAATACATTGTATGATGAAAATACATCAATGTCCCAAATGGAAATAAACAGAATGTAATTTATGAACATGTCATAATTTACTTTGATTGTATTTTCAACAAGGGCAGGTTCCTCAACATGGCATTGCTAAAACCAAAGGGATCCAAAGAAGACGAGACTTGTAGTCACAGTGAGATCGAAGAAGCAAAGGCAGTACTAAGGTTGGTTCCAATTTGGGCTACAACTTTGGTTTATGGCATTGTCTTTGCTCAAGTTTCTACATTCTTCACCAAGCAAGGGAGTTCTATGCAGAAAACAATAGTTCCTGGTTTCGACATACCTCCTGCCTCTCTTCAAACGATAACCAATGTCGCCATTGTTTTCTTTAGCCCCATCTACGACCGGATATTTGTGCCACTAGCAAGAATTATCACTGGAAAACCCTCAGGCATCACATTGCTTCAAAGAATTGGCACTGGAATTTTCATATCAATATTCACAGTAGTATTTGCAGCCTTTGTTGAGATTAAAAGACTAAAAATAGCACAAGAGCATGGTCTTGTTGATGATCCAAATGCAACTGTTCCAATGAGTATATGGTGGTTGGTTCCTCAATACTTTTTGTTTGGAATTTCTGAGGTTTTTACTATGGTTGGTCTTCAAGAATTTTTCTACGATCAAGTCCCAAATGAACTAAGAAGCATGGGATTTGCACTCTATTTGAGTATTGTTGGTGTTGGAAGCTTTCTAAGTGGCTTTCTCATTTCTTTGATAGAATATTTTAGTGATAAAGATGGTCATGAAAGTTGGTTCTGTGACAATATCAATAAGGCACATCTTGATTACTTTTATTGGCTACTTGCTGGATTAAGTGTCATGGGGTTTACTTTGTTCGTTTACTTTGCAAAATCTTACATTTATAATCACAAAGGTATCATCTCATAA
Protein sequence

>MS.gene48607.t1

MAESNEVLLDAQLALVDGVVDYRGQPAVRSKSGYWRSAWFIIGVEVAERISYFGIKGNLISYLTGPLKQSTATAAKNVNIWSGTAALLPLLGAFFADSFLGRYRTIILASLIYILGLGLLTFSTMLPSLTSCSTQSQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEKYPEEHIARSSFFNWWYFTMVAGATATLPILTYIQDNYSWILGFGISCVVMIIALIVFLLGTRTYRFNIKDNNKSPFLRIGRVFVAAVRNWRNTLSTADIEEDGLLRRQKSEQFKFLNMALLKPKGSKEDETCSHSEIEEAKAVLRLVPIWATTLVYGIVFAQVSTFFTKQGSSMQKTIVPGFDIPPASLQTITNVAIVFFSPIYDRIFVPLARIITGKPSGITLLQRIGTGIFISIFTVVFAAFVEIKRLKIAQEHGLVDDPNATVPMSIWWLVPQYFLFGISEVFTMVGLQEFFYDQVPNELRSMGFALYLSIVGVGSFLSGFLISLIEYFSDKDGHESWFCDNINKAHLDYFYWLLAGLSVMGFTLFVYFAKSYIYNHKGIIS