AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043550.t1 MTR_2g093160 93.989 549 32 1 1 548 1 549 0.0 1025
MS.gene043550.t1 MTR_2g093180 87.455 550 67 1 1 548 1 550 0.0 932
MS.gene043550.t1 MTR_2g093640 83.060 549 92 1 1 548 1 549 0.0 902
MS.gene043550.t1 MTR_4g107580 34.596 581 334 11 1 546 4 573 8.72e-106 330
MS.gene043550.t1 MTR_4g107530 34.545 550 331 8 24 547 36 582 7.60e-104 325
MS.gene043550.t1 MTR_5g038060 34.403 561 343 9 9 546 19 577 4.79e-103 323
MS.gene043550.t1 MTR_4g107510 35.060 579 332 13 2 547 18 585 1.37e-102 321
MS.gene043550.t1 MTR_3g112460 34.581 561 337 8 1 543 1 549 2.97e-102 320
MS.gene043550.t1 MTR_8g469480 34.608 549 332 10 24 548 41 586 4.06e-100 315
MS.gene043550.t1 MTR_3g112470 34.225 561 339 8 1 543 1 549 1.44e-99 313
MS.gene043550.t1 MTR_5g055000 32.399 571 354 9 1 548 1 562 8.24e-98 308
MS.gene043550.t1 MTR_4g107610 32.558 559 343 8 6 544 26 570 9.20e-97 306
MS.gene043550.t1 MTR_2g101590 34.028 576 336 14 1 543 1 565 9.29e-96 305
MS.gene043550.t1 MTR_7g088825 32.252 555 350 8 14 546 15 565 6.84e-95 301
MS.gene043550.t1 MTR_3g462710 32.545 550 339 9 21 547 24 564 1.21e-94 300
MS.gene043550.t1 MTR_4g011280 32.981 567 343 12 3 543 14 569 1.23e-94 301
MS.gene043550.t1 MTR_2g101650 34.974 569 329 14 5 543 6 563 2.26e-94 300
MS.gene043550.t1 MTR_4g101380 34.234 555 332 10 20 547 26 574 2.96e-94 300
MS.gene043550.t1 MTR_7g067010 31.746 567 354 9 2 548 10 563 5.36e-94 298
MS.gene043550.t1 MTR_2g101610 33.218 578 339 14 1 543 1 566 9.21e-94 300
MS.gene043550.t1 MTR_5g012270 33.333 555 334 10 20 547 28 573 7.25e-93 295
MS.gene043550.t1 MTR_2g101640 33.450 571 343 12 1 543 1 562 1.24e-91 294
MS.gene043550.t1 MTR_5g012290 33.932 557 328 14 20 547 26 571 2.53e-91 292
MS.gene043550.t1 MTR_7g088790 32.570 568 352 9 1 546 14 572 9.71e-91 291
MS.gene043550.t1 MTR_8g103233 32.566 565 343 11 5 543 1 553 6.40e-90 288
MS.gene043550.t1 MTR_4g015080 31.330 549 349 8 20 548 33 573 1.16e-89 287
MS.gene043550.t1 MTR_1g057460 34.595 555 322 15 9 543 31 564 1.17e-89 287
MS.gene043550.t1 MTR_3g069500 33.641 541 335 9 20 548 34 562 1.90e-89 286
MS.gene043550.t1 MTR_4g114340 33.640 544 331 9 20 543 23 556 2.03e-89 286
MS.gene043550.t1 MTR_7g088820 32.117 548 346 8 21 546 25 568 4.12e-89 286
MS.gene043550.t1 MTR_2g101560 33.333 579 337 14 1 543 1 566 6.83e-89 286
MS.gene043550.t1 MTR_3g112450 32.562 562 349 10 1 543 1 551 7.46e-87 280
MS.gene043550.t1 MTR_5g038190 29.946 551 357 9 20 546 23 568 1.20e-86 279
MS.gene043550.t1 MTR_1g026740 32.513 569 338 18 5 543 1 553 1.43e-86 279
MS.gene043550.t1 MTR_8g469470 31.115 556 355 10 18 547 29 582 6.22e-86 278
MS.gene043550.t1 MTR_1g042310 30.237 549 352 8 20 546 25 564 1.04e-84 275
MS.gene043550.t1 MTR_7g098090 29.910 555 351 8 20 546 32 576 2.18e-84 274
MS.gene043550.t1 MTR_7g098040 28.364 550 361 7 20 546 33 572 9.74e-84 273
MS.gene043550.t1 MTR_4g019580 31.429 560 354 10 8 548 23 571 1.26e-83 271
MS.gene043550.t1 MTR_7g064780 32.000 575 357 10 4 548 2 572 3.67e-83 270
MS.gene043550.t1 MTR_1g026750 32.442 561 341 13 9 543 6 554 4.28e-83 270
MS.gene043550.t1 MTR_7g098160 29.570 558 344 10 20 546 32 571 1.54e-82 269
MS.gene043550.t1 MTR_4g033325 33.273 556 314 12 17 547 27 550 1.98e-82 268
MS.gene043550.t1 MTR_1g057460 34.241 514 298 14 49 543 1 493 3.20e-82 265
MS.gene043550.t1 MTR_7g098220 30.616 552 350 8 20 548 29 570 5.41e-82 268
MS.gene043550.t1 MTR_1g042310 30.057 529 339 8 40 546 1 520 1.06e-81 265
MS.gene043550.t1 MTR_3g462710 33.550 462 275 9 109 547 3 455 1.15e-81 263
MS.gene043550.t1 MTR_1g042310 30.057 529 339 8 40 546 8 527 1.32e-81 265
MS.gene043550.t1 MTR_3g069440 32.000 550 342 7 20 548 32 570 2.60e-81 265
MS.gene043550.t1 MTR_7g005930 31.238 541 349 8 19 543 33 566 5.71e-81 265
MS.gene043550.t1 MTR_7g098200 29.401 551 356 7 20 547 28 568 8.00e-81 265
MS.gene043550.t1 MTR_7g098180 30.199 553 352 9 20 548 30 572 3.32e-80 263
MS.gene043550.t1 MTR_1g009200 33.212 551 327 12 21 543 27 564 9.25e-80 261
MS.gene043550.t1 MTR_7g065080 30.926 540 347 10 23 548 33 560 1.02e-79 261
MS.gene043550.t1 MTR_7g088820 31.558 507 321 8 62 546 4 506 1.28e-79 259
MS.gene043550.t1 MTR_7g098220 30.639 532 336 8 40 548 5 526 1.63e-79 260
MS.gene043550.t1 MTR_7g098200 29.570 558 336 9 20 547 28 558 3.53e-79 260
MS.gene043550.t1 MTR_3g072300 29.476 553 358 8 17 547 20 562 5.56e-79 259
MS.gene043550.t1 MTR_0294s0020 32.252 555 321 11 17 547 27 550 1.49e-78 257
MS.gene043550.t1 MTR_7g064800 31.465 553 348 10 17 540 22 572 1.68e-78 258
MS.gene043550.t1 MTR_3g014790 29.758 578 341 13 5 547 1 548 7.19e-78 256
MS.gene043550.t1 MTR_0236s0050 33.463 514 302 14 49 543 1 493 1.15e-77 253
MS.gene043550.t1 MTR_1g075440 28.905 557 349 9 20 546 27 566 2.27e-77 255
MS.gene043550.t1 MTR_1g026770 31.127 559 342 15 13 543 7 550 4.58e-77 254
MS.gene043550.t1 MTR_1g041875 28.872 523 348 8 20 527 28 541 6.35e-77 254
MS.gene043550.t1 MTR_1g041815 29.038 551 359 7 18 546 24 564 1.77e-76 253
MS.gene043550.t1 MTR_2g005130 30.869 541 344 8 20 546 39 563 3.42e-76 252
MS.gene043550.t1 MTR_7g098230 28.060 531 349 7 40 547 45 565 1.02e-75 251
MS.gene043550.t1 MTR_4g033315 31.171 555 329 12 17 547 27 552 2.64e-75 249
MS.gene043550.t1 MTR_4g033310 31.171 555 329 12 17 547 27 552 2.64e-75 249
MS.gene043550.t1 MTR_7g013270 30.769 546 353 9 16 543 85 623 3.56e-75 251
MS.gene043550.t1 MTR_5g085850 30.000 540 353 12 20 546 29 556 3.71e-75 249
MS.gene043550.t1 MTR_1g041835 28.131 551 364 7 18 546 24 564 5.44e-75 248
MS.gene043550.t1 MTR_5g014150 30.419 549 357 8 17 543 40 585 1.43e-74 248
MS.gene043550.t1 MTR_2g093650 67.380 187 19 2 338 524 34 178 2.18e-74 235
MS.gene043550.t1 MTR_1g041885 28.911 505 335 8 40 529 1 496 4.22e-74 245
MS.gene043550.t1 MTR_3g069420 31.387 548 342 9 23 548 36 571 1.00e-73 246
MS.gene043550.t1 MTR_4g033395 32.932 498 286 10 17 495 28 496 1.12e-73 243
MS.gene043550.t1 MTR_4g033330 32.514 529 304 12 21 525 31 530 1.43e-73 243
MS.gene043550.t1 MTR_7g065080 30.928 485 309 9 78 548 1 473 4.46e-73 241
MS.gene043550.t1 MTR_8g038880 30.341 557 337 11 20 548 19 552 2.02e-72 241
MS.gene043550.t1 MTR_4g033375 32.394 497 290 9 17 495 28 496 2.29e-72 239
MS.gene043550.t1 MTR_4g098800 30.129 541 358 9 17 540 32 569 9.11e-72 240
MS.gene043550.t1 MTR_1g116930 30.418 526 343 10 39 548 41 559 1.08e-71 240
MS.gene043550.t1 MTR_4g098800 30.129 541 358 9 17 540 97 634 3.50e-71 240
MS.gene043550.t1 MTR_7g088820 31.729 457 286 8 112 546 6 458 4.58e-71 236
MS.gene043550.t1 MTR_3g005010 28.391 553 334 12 20 547 29 544 5.97e-70 234
MS.gene043550.t1 MTR_2g017750 29.259 540 347 10 39 546 52 588 7.90e-70 235
MS.gene043550.t1 MTR_7g010820 31.977 516 309 10 39 523 44 548 2.53e-69 234
MS.gene043550.t1 MTR_7g098200 30.087 462 290 7 109 547 3 454 2.60e-68 228
MS.gene043550.t1 MTR_3g100980 28.393 560 348 14 18 548 17 552 2.29e-67 228
MS.gene043550.t1 MTR_7g098150 30.516 426 277 5 20 436 32 447 3.51e-67 225
MS.gene043550.t1 MTR_4g033325 32.548 467 258 12 106 547 18 452 3.90e-67 224
MS.gene043550.t1 MTR_4g033325 32.723 437 249 10 136 547 10 426 6.73e-67 223
MS.gene043550.t1 MTR_5g038380 28.419 563 350 12 21 546 28 574 1.57e-66 226
MS.gene043550.t1 MTR_8g469310 28.873 568 340 15 21 546 26 571 5.39e-65 222
MS.gene043550.t1 MTR_4g123537 28.295 569 366 14 2 547 22 571 1.31e-64 222
MS.gene043550.t1 MTR_7g111260 27.385 566 366 14 7 547 2 547 3.72e-63 217
MS.gene043550.t1 MTR_4g033385 32.135 445 257 11 129 547 28 453 6.76e-63 213
MS.gene043550.t1 MTR_3g100980 27.521 585 349 15 18 548 17 580 1.87e-61 213
MS.gene043550.t1 MTR_4g107670 27.431 576 350 15 17 547 20 572 3.35e-61 212
MS.gene043550.t1 MTR_1g085090 27.632 532 344 12 39 547 34 547 3.06e-60 210
MS.gene043550.t1 MTR_8g087780 26.236 526 363 6 1 506 6 526 3.22e-60 209
MS.gene043550.t1 MTR_8g087810 27.855 578 377 11 1 546 6 575 1.05e-59 208
MS.gene043550.t1 MTR_7g006540 27.648 557 367 11 20 546 62 612 2.75e-58 205
MS.gene043550.t1 MTR_8g091265 71.756 131 32 2 289 414 3 133 4.84e-56 185
MS.gene043550.t1 MTR_7g098210 26.945 527 274 12 44 547 5 443 3.37e-49 176
MS.gene043550.t1 MTR_6g008690 25.047 535 342 11 41 543 27 534 5.27e-45 167
MS.gene043550.t1 MTR_7g051880 24.368 554 368 13 2 543 11 525 2.88e-44 164
MS.gene043550.t1 MTR_7g051830 24.457 552 370 10 2 543 11 525 4.60e-44 164
MS.gene043550.t1 MTR_4g024930 26.118 559 343 14 17 543 32 552 7.18e-44 164
MS.gene043550.t1 MTR_7g052600 24.457 552 370 11 2 543 11 525 2.22e-43 162
MS.gene043550.t1 MTR_1g009170 26.933 401 224 10 149 529 9 360 1.63e-33 132
MS.gene043550.t1 MTR_4g033310 27.215 316 196 7 249 547 190 488 6.72e-32 129
MS.gene043550.t1 MTR_4g033310 35.955 178 97 4 17 189 27 192 1.16e-18 89.4
MS.gene043550.t1 MTR_8g091275 62.500 72 26 1 197 267 1 72 1.84e-25 100
MS.gene043550.t1 MTR_8g091480 62.500 56 17 1 233 288 38 89 3.39e-13 72.8
MS.gene043550.t1 MTR_7g064160 35.955 89 57 0 17 105 25 113 1.14e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043550.t1 AT3G45650 51.526 557 249 6 1 548 1 545 0.0 565
MS.gene043550.t1 AT3G45660 50.817 551 248 5 9 548 6 544 0.0 560
MS.gene043550.t1 AT3G45660 50.817 551 248 5 9 548 6 544 0.0 560
MS.gene043550.t1 AT3G45660 50.817 551 248 5 9 548 27 565 0.0 560
MS.gene043550.t1 AT3G45680 51.005 547 263 5 3 548 2 544 0.0 549
MS.gene043550.t1 AT3G45650 49.228 583 249 7 1 548 1 571 0.0 549
MS.gene043550.t1 AT3G45710 48.270 549 277 5 2 548 3 546 0.0 537
MS.gene043550.t1 AT3G45700 47.601 542 275 3 7 548 2 534 0.0 523
MS.gene043550.t1 AT3G45720 46.852 540 283 2 9 548 7 542 1.03e-177 513
MS.gene043550.t1 AT3G45690 47.026 538 241 7 11 548 8 501 1.82e-163 475
MS.gene043550.t1 AT1G69870 35.443 553 335 8 14 546 44 594 1.00e-110 343
MS.gene043550.t1 AT1G18880 35.602 573 334 9 3 548 4 568 1.88e-106 331
MS.gene043550.t1 AT3G47960 35.018 554 320 11 24 546 64 608 8.69e-100 315
MS.gene043550.t1 AT1G27080 33.273 550 330 9 20 546 13 548 3.24e-98 309
MS.gene043550.t1 AT2G26690 35.185 540 323 9 20 541 23 553 3.66e-98 309
MS.gene043550.t1 AT3G54140 32.358 547 344 7 20 546 23 563 4.55e-97 306
MS.gene043550.t1 AT3G54140 32.358 547 344 7 20 546 23 563 4.55e-97 306
MS.gene043550.t1 AT5G01180 32.451 567 351 9 2 548 11 565 2.30e-96 304
MS.gene043550.t1 AT5G01180 32.451 567 351 9 2 548 11 565 2.30e-96 304
MS.gene043550.t1 AT5G01180 32.451 567 351 9 2 548 11 565 2.30e-96 304
MS.gene043550.t1 AT1G62200 34.264 537 328 8 21 539 52 581 2.96e-96 305
MS.gene043550.t1 AT3G16180 32.689 569 342 12 6 543 7 565 9.00e-96 303
MS.gene043550.t1 AT1G68570 34.326 571 347 9 2 548 4 570 1.16e-95 303
MS.gene043550.t1 AT5G62680 33.571 560 322 11 24 546 46 592 4.90e-95 302
MS.gene043550.t1 AT1G52190 32.522 575 340 14 3 543 6 566 4.54e-94 300
MS.gene043550.t1 AT2G26690 35.192 520 310 9 40 541 10 520 5.20e-94 297
MS.gene043550.t1 AT2G26690 35.271 516 307 9 44 541 2 508 2.07e-93 295
MS.gene043550.t1 AT1G68570 35.019 534 319 9 39 548 11 540 3.10e-92 293
MS.gene043550.t1 AT1G62200 33.039 566 325 10 21 539 52 610 1.56e-91 293
MS.gene043550.t1 AT1G27080 33.077 520 311 9 50 546 1 506 2.15e-91 290
MS.gene043550.t1 AT1G62200 33.039 566 325 10 21 539 66 624 2.44e-91 293
MS.gene043550.t1 AT5G28470 31.330 549 353 11 18 547 14 557 6.19e-85 274
MS.gene043550.t1 AT2G02040 30.459 545 352 7 20 543 40 578 3.00e-84 273
MS.gene043550.t1 AT5G28470 30.530 547 358 9 18 547 14 555 1.76e-83 270
MS.gene043550.t1 AT3G54450 28.495 558 342 9 22 548 13 544 3.56e-83 270
MS.gene043550.t1 AT5G46040 30.813 529 336 7 20 527 26 545 9.28e-80 261
MS.gene043550.t1 AT1G12110 31.579 551 348 9 20 547 26 570 1.96e-79 261
MS.gene043550.t1 AT3G21670 31.978 541 344 11 20 546 28 558 3.49e-78 257
MS.gene043550.t1 AT1G33440 31.111 540 347 8 20 543 37 567 7.16e-77 254
MS.gene043550.t1 AT3G53960 30.427 562 360 14 8 548 24 575 9.03e-77 254
MS.gene043550.t1 AT5G19640 30.075 532 342 9 22 538 60 576 2.55e-76 253
MS.gene043550.t1 AT2G40460 30.948 559 334 13 18 547 21 556 2.60e-76 252
MS.gene043550.t1 AT1G69860 29.947 561 368 8 1 547 1 550 9.76e-76 250
MS.gene043550.t1 AT2G02020 29.508 549 317 10 23 548 44 545 1.71e-75 249
MS.gene043550.t1 AT5G46050 28.435 524 345 6 20 522 26 540 1.52e-74 248
MS.gene043550.t1 AT2G37900 28.877 561 371 9 1 548 23 568 1.77e-74 247
MS.gene043550.t1 AT1G59740 29.945 541 350 9 20 540 40 571 2.39e-70 236
MS.gene043550.t1 AT1G27040 29.348 552 353 10 17 545 19 556 5.83e-70 235
MS.gene043550.t1 AT1G27040 29.348 552 353 10 17 545 23 560 7.30e-70 234
MS.gene043550.t1 AT1G27040 30.000 530 334 10 39 545 13 528 8.61e-69 231
MS.gene043550.t1 AT1G69850 29.474 570 353 12 17 547 21 580 1.00e-68 232
MS.gene043550.t1 AT2G37900 29.518 498 328 8 64 548 2 489 1.29e-68 229
MS.gene043550.t1 AT1G22550 30.319 564 327 15 20 548 29 561 1.64e-68 231
MS.gene043550.t1 AT1G32450 30.741 553 353 14 17 543 33 581 1.84e-68 232
MS.gene043550.t1 AT4G21680 30.054 559 351 13 17 545 24 572 6.51e-68 230
MS.gene043550.t1 AT1G22540 31.250 560 326 12 17 548 26 554 1.99e-67 228
MS.gene043550.t1 AT1G72125 29.496 556 334 13 23 548 31 558 2.80e-66 225
MS.gene043550.t1 AT1G72140 27.886 563 335 12 17 547 30 553 5.38e-66 224
MS.gene043550.t1 AT1G72130 29.575 541 328 9 23 545 27 532 9.87e-66 223
MS.gene043550.t1 AT1G72120 29.317 556 337 11 20 548 28 554 1.05e-63 218
MS.gene043550.t1 AT1G22570 29.720 535 321 11 20 524 29 538 1.39e-63 218
MS.gene043550.t1 AT5G46050 29.128 436 279 6 108 522 2 428 1.45e-62 213
MS.gene043550.t1 AT2G02020 27.687 549 306 12 23 548 44 524 4.23e-60 207
MS.gene043550.t1 AT1G22570 29.063 523 316 11 32 524 4 501 4.28e-60 207
MS.gene043550.t1 AT5G62730 27.273 561 352 11 17 547 52 586 2.83e-57 201
MS.gene043550.t1 AT3G25260 26.758 512 315 7 48 543 48 515 4.90e-57 199
MS.gene043550.t1 AT5G62730 28.015 539 332 12 39 547 15 527 8.24e-57 199
MS.gene043550.t1 AT5G13400 26.750 557 374 10 20 548 63 613 2.18e-56 200
MS.gene043550.t1 AT1G72130 29.195 435 266 7 129 545 4 414 2.75e-55 192
MS.gene043550.t1 AT1G72130 29.195 435 266 7 129 545 4 414 2.75e-55 192
MS.gene043550.t1 AT5G14940 26.381 561 341 13 19 538 4 533 1.73e-53 190
MS.gene043550.t1 AT3G25280 25.627 558 363 12 1 543 1 521 3.30e-51 183
MS.gene043550.t1 AT5G11570 27.405 551 303 16 13 543 3 476 1.31e-48 176
MS.gene043550.t1 AT3G01350 25.230 543 338 12 41 539 27 545 2.69e-44 165
MS.gene043550.t1 AT2G38100 25.479 522 331 12 49 547 2 488 1.92e-32 130
MS.gene043550.t1 AT2G38100 25.479 522 331 12 49 547 24 510 4.33e-32 130
MS.gene043550.t1 AT2G38100 25.479 522 331 12 49 547 18 504 4.89e-32 130

Find 100 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTACATTGAAGATAATT+TGG 0.115376 2.2:-7705147 MS.gene043550:CDS
ATCCTTGCTGACTCCTTCTT+TGG 0.219115 2.2:-7707377 MS.gene043550:CDS
GCAATGATTTCAATGCTTAT+AGG 0.227390 2.2:-7701489 MS.gene043550:CDS
GCTTCAAGGAAGTGCGGTTT+TGG 0.251801 2.2:-7705033 MS.gene043550:CDS
GTCAAGAAATGTGAGGAAAA+TGG 0.280312 2.2:+7701788 None:intergenic
GATAATTTGGGTTGGGCTAT+AGG 0.287829 2.2:-7705134 MS.gene043550:CDS
TTCGCTTTCTATGTTGCTTC+AGG 0.289691 2.2:-7705188 MS.gene043550:CDS
CAATGATTTCAATGCTTATA+GGG 0.292650 2.2:-7701488 MS.gene043550:CDS
GGACATGTGTTGAATATTCT+TGG 0.312471 2.2:-7701696 MS.gene043550:CDS
TTCTTGTTGTGTATCATTGC+TGG 0.317078 2.2:-7707333 MS.gene043550:intron
TTGGGTTGGGCTATAGGATT+TGG 0.320970 2.2:-7705128 MS.gene043550:CDS
CAATTAGTGTTGGTTGGTAT+TGG 0.327167 2.2:-7701588 MS.gene043550:CDS
AAGCTACTTTGGATTGCTAT+TGG 0.327470 2.2:+7701906 None:intergenic
CAGATGAGTGTTTAAGTATT+GGG 0.328248 2.2:-7707906 MS.gene043550:CDS
GCTTCAGGAGCTGCATTAAC+TGG 0.331209 2.2:-7705173 MS.gene043550:CDS
ATTTACATTGAAGATAATTT+GGG 0.339090 2.2:-7705146 MS.gene043550:CDS
CCAGGTTGGCATAAGGTTAC+CGG 0.339721 2.2:-7701753 MS.gene043550:CDS
TGAATCTAAGAGGCTCAAAT+TGG 0.341085 2.2:-7701652 MS.gene043550:CDS
TACTGGATGTTAGTAGTGTT+TGG 0.345072 2.2:-7701369 MS.gene043550:CDS
GTGTTAATATCAATTGGTTT+TGG 0.352712 2.2:-7705296 MS.gene043550:CDS
GCAGATGAGTGTTTAAGTAT+TGG 0.357681 2.2:-7707907 MS.gene043550:CDS
TTAATTATAGGTATGGTAAC+GGG 0.361504 2.2:-7707539 MS.gene043550:intron
TTGCCATGATTTATTTCATC+AGG 0.374654 2.2:+7701405 None:intergenic
TTAGTGATGGATCGTTCATT+AGG 0.387822 2.2:-7701867 MS.gene043550:CDS
AGCATAGTGTTAATATCAAT+TGG 0.389904 2.2:-7705302 MS.gene043550:CDS
CATTGAAGATAATTTGGGTT+GGG 0.398104 2.2:-7705141 MS.gene043550:CDS
TAATTGGAATCCTACCATTA+TGG 0.400148 2.2:-7701953 MS.gene043550:CDS
CACAATTCTATTATTCTTGA+CGG 0.406311 2.2:-7705420 MS.gene043550:CDS
ATCACATGCAAACCACCAAC+AGG 0.408280 2.2:-7705350 MS.gene043550:CDS
GAAGTACAACCAAGCTACTT+TGG 0.422013 2.2:+7701895 None:intergenic
TATCGAGCTGAAAAGCTTCA+AGG 0.423443 2.2:-7705047 MS.gene043550:CDS
CAGATTGTAAACATTGTTGT+TGG 0.430928 2.2:-7707431 MS.gene043550:CDS
TACTAATGGTGATGATGTTA+TGG 0.435084 2.2:-7704934 MS.gene043550:CDS
ACTTGCAAGCACTGGAATAG+TGG 0.446944 2.2:-7707510 MS.gene043550:CDS
CCTATGCCGCTCCAACGAAT+AGG 0.453044 2.2:-7701723 MS.gene043550:CDS
CTGCTCTTGTTGAATCTAAG+AGG 0.457047 2.2:-7701662 MS.gene043550:CDS
TGTTGGTGGTTTGCATGTGA+TGG 0.461057 2.2:+7705352 None:intergenic
CTTGACAGAGTGCTATTGCC+AGG 0.463548 2.2:-7701771 MS.gene043550:CDS
GAGGATTACTATACTACTAA+TGG 0.465881 2.2:-7704948 MS.gene043550:CDS
AAGAGAGAGACCAATGAAGA+AGG 0.470036 2.2:+7707855 None:intergenic
GGATTGCTATTGGAGTTGAT+AGG 0.470157 2.2:+7701916 None:intergenic
TTTCCACAATTAGTGTTGGT+TGG 0.482453 2.2:-7701594 MS.gene043550:CDS
GCTATTGCCAGGTTGGCATA+AGG 0.485413 2.2:-7701760 MS.gene043550:CDS
AATCAGTACTCCTACGAACT+TGG 0.488778 2.2:+7701433 None:intergenic
GAATTCTTGCTGCATGGATG+AGG 0.493746 2.2:+7705377 None:intergenic
TCAAGAAATGTGAGGAAAAT+GGG 0.497572 2.2:+7701789 None:intergenic
ATTAATTATAGGTATGGTAA+CGG 0.503604 2.2:-7707540 MS.gene043550:intron
CCGGTAACCTTATGCCAACC+TGG 0.503919 2.2:+7701753 None:intergenic
TAATAGAATGTAACTTGTCC+AGG 0.509085 2.2:+7701549 None:intergenic
CCTATTCGTTGGAGCGGCAT+AGG 0.512650 2.2:+7701723 None:intergenic
GGGTTGTCACTTGCAAGCAC+TGG 0.514566 2.2:-7707518 MS.gene043550:CDS
ATAACAGAAACAGAACTAGC+TGG 0.514620 2.2:+7701828 None:intergenic
TTGTTGCATCTGTTCGTAAG+TGG 0.518784 2.2:-7704995 MS.gene043550:CDS
AATATACTAGAAGACCATAA+TGG 0.522189 2.2:+7701939 None:intergenic
ACATTGAAGATAATTTGGGT+TGG 0.523367 2.2:-7705142 MS.gene043550:CDS
AGGATTTGGTATTTGTGTTG+TGG 0.524434 2.2:-7705114 MS.gene043550:CDS
AACAGAGAATGAGCCAAAGA+AGG 0.526196 2.2:+7707364 None:intergenic
GTGTATTGGATCCCTGTTGG+TGG 0.528597 2.2:+7705338 None:intergenic
GACATGTGTTGAATATTCTT+GGG 0.529545 2.2:-7701695 MS.gene043550:CDS
ACAGAGTGCTATTGCCAGGT+TGG 0.530502 2.2:-7701767 MS.gene043550:CDS
TTACCTGATGAAATAAATCA+TGG 0.531630 2.2:-7701408 MS.gene043550:CDS
AGAGAGAGACCAATGAAGAA+GGG 0.533994 2.2:+7707856 None:intergenic
GTTGTTTCCACAATTAGTGT+TGG 0.534629 2.2:-7701598 MS.gene043550:CDS
TGTACTTCAAGCTTTAGTGA+TGG 0.535064 2.2:-7701880 MS.gene043550:CDS
ATACCAACCAACACTAATTG+TGG 0.537554 2.2:+7701591 None:intergenic
CAGGTTGGCATAAGGTTACC+GGG 0.538300 2.2:-7701752 MS.gene043550:CDS
GCAAGGTAGATAATGTGTAC+TGG 0.551200 2.2:-7701386 MS.gene043550:CDS
AATAGCAATCCAAAGTAGCT+TGG 0.551579 2.2:-7701904 MS.gene043550:CDS
CTTGCAAGCACTGGAATAGT+GGG 0.551829 2.2:-7707509 MS.gene043550:CDS
CGTTACACAGCAGCATCACT+AGG 0.553070 2.2:-7705266 MS.gene043550:CDS
TTGGGAGCAAACGTGGCGGT+TGG 0.555374 2.2:-7707888 MS.gene043550:CDS
AAGTTCGTAGGAGTACTGAT+TGG 0.558833 2.2:-7701431 MS.gene043550:CDS
TTATGTATAAAACTGTGTAT+TGG 0.560176 2.2:+7705324 None:intergenic
TGTGTTGAATATTCTTGGGA+TGG 0.569483 2.2:-7701691 MS.gene043550:CDS
GCAAGGATTGCTGCAACAAG+TGG 0.570463 2.2:+7707392 None:intergenic
TGGATGTTAGTAGTGTTTGG+AGG 0.575496 2.2:-7701366 MS.gene043550:CDS
CATGTCCTACTCCTATTCGT+TGG 0.577783 2.2:+7701712 None:intergenic
TAACAGAAACAGAACTAGCT+GGG 0.579720 2.2:+7701829 None:intergenic
AGCCAAAGAAGGAGTCAGCA+AGG 0.590679 2.2:+7707375 None:intergenic
ATGGATGAATTCTTGCTGCA+TGG 0.600990 2.2:+7705371 None:intergenic
TAATTATAGGTATGGTAACG+GGG 0.609625 2.2:-7707538 MS.gene043550:intron
TTAAGTATTGGGAGCAAACG+TGG 0.609993 2.2:-7707895 MS.gene043550:CDS
CAAATTGGTACATATGCATG+TGG 0.612005 2.2:-7701637 MS.gene043550:CDS
CCGCTCCAACGAATAGGAGT+AGG 0.614584 2.2:-7701717 MS.gene043550:CDS
TAAGCTCTCATCTAGAGTTG+AGG 0.617148 2.2:-7704967 MS.gene043550:CDS
TGATACACAACAAGAAGCAA+AGG 0.619428 2.2:+7707340 None:intergenic
CTTTAATTGACCAAGTTCGT+AGG 0.619597 2.2:-7701443 MS.gene043550:CDS
ATGTGGAAATGTCTGTGCTA+TGG 0.623399 2.2:-7701620 MS.gene043550:CDS
GATGCAGACCTAAAATCAGA+TGG 0.623454 2.2:-7702038 MS.gene043550:CDS
TGATGAAATAAATCATGGCA+AGG 0.625497 2.2:-7701403 MS.gene043550:CDS
TTTGACAAGCCAGAACATCA+AGG 0.628290 2.2:-7705233 MS.gene043550:CDS
CCTACTCCTATTCGTTGGAG+CGG 0.642760 2.2:+7701717 None:intergenic
TGAAAAGCTTCAAGGAAGTG+CGG 0.653911 2.2:-7705039 MS.gene043550:CDS
TACTAGAAGACCATAATGGT+AGG 0.664461 2.2:+7701943 None:intergenic
ACTGTGTATTGGATCCCTGT+TGG 0.666873 2.2:+7705335 None:intergenic
GATGTGCTCTTAAGAGATTG+TGG 0.668244 2.2:+7701516 None:intergenic
GTGTTACCTCCAGTTACACC+AGG 0.671087 2.2:-7704906 MS.gene043550:CDS
GCACTCTGTCAAGAAATGTG+AGG 0.684494 2.2:+7701781 None:intergenic
TCACATGCAAACCACCAACA+GGG 0.685616 2.2:-7705349 MS.gene043550:CDS
AGTATTGGGAGCAAACGTGG+CGG 0.726596 2.2:-7707892 MS.gene043550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAATTAAT+TGG + chr2.2:7703030-7703049 None:intergenic 0.0%
!! AAATAATTAAAAATTCAAGT+AGG + chr2.2:7703183-7703202 None:intergenic 10.0%
!! AGATTATATATATAATTGAT+TGG + chr2.2:7703151-7703170 None:intergenic 10.0%
!! ATATAAATATATAAAGATTG+AGG - chr2.2:7704604-7704623 MS.gene043550:intron 10.0%
!! ATATAACCATTTAAATAATA+TGG + chr2.2:7701661-7701680 None:intergenic 10.0%
!! ATCTATATTATAATTATGTT+AGG - chr2.2:7701964-7701983 MS.gene043550:CDS 10.0%
!! ATTAATAAAATATTGTTTAG+AGG - chr2.2:7702687-7702706 MS.gene043550:intron 10.0%
!! GTTAAAATAATAAAATACTA+AGG - chr2.2:7707045-7707064 MS.gene043550:intron 10.0%
!!! TAAATTTGTTTAGATAAAAA+TGG + chr2.2:7706578-7706597 None:intergenic 10.0%
!!! TATAAATATTCTTTCTTTTA+AGG + chr2.2:7702268-7702287 None:intergenic 10.0%
!!! TTATTTTGTTGATTAATTAT+AGG - chr2.2:7701697-7701716 MS.gene043550:CDS 10.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2.2:7706402-7706421 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2.2:7706401-7706420 MS.gene043550:intron 15.0%
!! AGTTAAAAATTCATATGTTA+AGG - chr2.2:7702860-7702879 MS.gene043550:intron 15.0%
!! ATTTACATTGAAGATAATTT+GGG - chr2.2:7704102-7704121 MS.gene043550:intron 15.0%
!! GAAGATTTCAAAAAAATAAT+TGG - chr2.2:7707279-7707298 MS.gene043550:intron 15.0%
!! GATAAACTAATTGAAATATT+TGG + chr2.2:7706010-7706029 None:intergenic 15.0%
!! GTATAATTAATAAATGCATT+TGG + chr2.2:7704944-7704963 None:intergenic 15.0%
!! TATTTACATTGAAGATAATT+TGG - chr2.2:7704101-7704120 MS.gene043550:intron 15.0%
!! TTGAGATAAAAAAAATTGAT+TGG + chr2.2:7703094-7703113 None:intergenic 15.0%
!!! AATTTTTTTTAGGTAAAGAA+AGG - chr2.2:7702406-7702425 MS.gene043550:intron 15.0%
!!! GAAATTTTTTTTACTTGAAT+TGG + chr2.2:7703562-7703581 None:intergenic 15.0%
!!! GCTCTAAATTTTTATTTTTT+TGG - chr2.2:7703507-7703526 MS.gene043550:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2.2:7706378-7706397 None:intergenic 15.0%
!!! TATATTAATTTTTATGTCTC+TGG + chr2.2:7703478-7703497 None:intergenic 15.0%
!! AAAAACTGAGATTACAAAAT+TGG - chr2.2:7707022-7707041 MS.gene043550:intron 20.0%
!! AAAACTGAGATTACAAAATT+GGG - chr2.2:7707023-7707042 MS.gene043550:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2.2:7706392-7706411 MS.gene043550:intron 20.0%
!! AAGTACTAAAAAAGAAACAA+AGG + chr2.2:7702050-7702069 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr2.2:7706315-7706334 None:intergenic 20.0%
!! ATTAATAAATGCATTTGGAT+TGG + chr2.2:7704939-7704958 None:intergenic 20.0%
!! ATTAATTATAGGTATGGTAA+CGG - chr2.2:7701708-7701727 MS.gene043550:CDS 20.0%
!! GTCTTAACATTAGATATATA+AGG - chr2.2:7706640-7706659 MS.gene043550:intron 20.0%
!! TAAAAAAGAAACAAAGGAAA+TGG + chr2.2:7702044-7702063 None:intergenic 20.0%
!! TAACAAAATAGTTGAACATA+TGG - chr2.2:7703209-7703228 MS.gene043550:intron 20.0%
!! TAGTTAAGATGATAAACTAA+TGG - chr2.2:7705856-7705875 MS.gene043550:intron 20.0%
!! TATCTAAACAAATTTAGATC+AGG - chr2.2:7706582-7706601 MS.gene043550:intron 20.0%
!! TTAATGACTTAAAAGATGAA+AGG + chr2.2:7701422-7701441 None:intergenic 20.0%
!! TTATGAAAATGCAAATCATA+TGG + chr2.2:7703741-7703760 None:intergenic 20.0%
!! TTATGTATAAAACTGTGTAT+TGG + chr2.2:7703927-7703946 None:intergenic 20.0%
!! TTGATGTTTAATATTGATCT+AGG + chr2.2:7703284-7703303 None:intergenic 20.0%
!! TTGTTTAGATAAAAATGGTA+CGG + chr2.2:7706573-7706592 None:intergenic 20.0%
!!! AAAAAGATTAAGGTACTTTT+TGG - chr2.2:7704365-7704384 MS.gene043550:intron 20.0%
!!! ACGAGCTAATAATTTTTTTT+AGG - chr2.2:7702396-7702415 MS.gene043550:intron 20.0%
!!! TAAAACTAGTTTTAGAATCA+TGG - chr2.2:7702995-7703014 MS.gene043550:intron 20.0%
!!! TTCAGATTTTTCTAAAAGAT+AGG - chr2.2:7703403-7703422 MS.gene043550:intron 20.0%
!!! TTGTTGATTAATTATAGGTA+TGG - chr2.2:7701702-7701721 MS.gene043550:CDS 20.0%
! AAAAAGGATACAAAAAGACA+TGG + chr2.2:7703314-7703333 None:intergenic 25.0%
! AAAGAAAATCATCACAACAA+TGG + chr2.2:7705262-7705281 None:intergenic 25.0%
! AAATCAAACTTCAAACTTTG+AGG - chr2.2:7704875-7704894 MS.gene043550:intron 25.0%
! AATATACTAGAAGACCATAA+TGG + chr2.2:7707312-7707331 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG + chr2.2:7706435-7706454 None:intergenic 25.0%
! ACTCATTTATAACACTCATA+TGG + chr2.2:7702483-7702502 None:intergenic 25.0%
! AGCATAGTGTTAATATCAAT+TGG - chr2.2:7703946-7703965 MS.gene043550:intron 25.0%
! AGTTATGATTAGCATATAGT+TGG - chr2.2:7704535-7704554 MS.gene043550:intron 25.0%
! ATACCACTATTTAATGTGAT+GGG + chr2.2:7702771-7702790 None:intergenic 25.0%
! ATATGGTAAAATAGGACATT+TGG + chr2.2:7703724-7703743 None:intergenic 25.0%
! ATCGAATTTAAATCCAAGTT+AGG - chr2.2:7706676-7706695 MS.gene043550:intron 25.0%
! ATGAATAAATATTGCCTCAT+AGG - chr2.2:7706924-7706943 MS.gene043550:intron 25.0%
! ATTTATAACACTCATATGGA+TGG + chr2.2:7702479-7702498 None:intergenic 25.0%
! CAATGATTTCAATGCTTATA+GGG - chr2.2:7707760-7707779 MS.gene043550:intron 25.0%
! CACAATTCTATTATTCTTGA+CGG - chr2.2:7703828-7703847 MS.gene043550:intron 25.0%
! CATATGTTAAGGTGAATAAA+TGG - chr2.2:7702871-7702890 MS.gene043550:intron 25.0%
! GAGTGATATGAATCAATAAT+TGG + chr2.2:7702641-7702660 None:intergenic 25.0%
! GCATGTCCATATTATTTAAA+TGG - chr2.2:7701652-7701671 MS.gene043550:CDS 25.0%
! TAACATAAGAATTTGTGAGA+CGG - chr2.2:7706148-7706167 MS.gene043550:intron 25.0%
! TCGAATTTAAATCCAAGTTA+GGG - chr2.2:7706677-7706696 MS.gene043550:intron 25.0%
! TCTTCTTCTTTGATTCATTT+AGG - chr2.2:7705919-7705938 MS.gene043550:intron 25.0%
! TGATTGCATATAAGTTTGAT+TGG + chr2.2:7702176-7702195 None:intergenic 25.0%
! TGCAAATCATATGGTAAAAT+AGG + chr2.2:7703732-7703751 None:intergenic 25.0%
! TTAAACTGTTTATCCAAACA+TGG - chr2.2:7706547-7706566 MS.gene043550:intron 25.0%
! TTAATTATAGGTATGGTAAC+GGG - chr2.2:7701709-7701728 MS.gene043550:CDS 25.0%
! TTACCTGATGAAATAAATCA+TGG - chr2.2:7707840-7707859 MS.gene043550:intron 25.0%
! TTAGAAAAATCTGAACTTGA+TGG + chr2.2:7703398-7703417 None:intergenic 25.0%
! TTATCTTCGTAAACTTAACT+CGG + chr2.2:7702951-7702970 None:intergenic 25.0%
!! AATTGTTGCTTCTTAAATTG+AGG - chr2.2:7705647-7705666 MS.gene043550:intron 25.0%
!! ATTGCCTAACTGTTTTATAA+CGG - chr2.2:7705547-7705566 MS.gene043550:intron 25.0%
!! GATTTTCCATGTTATCAATT+TGG + chr2.2:7704860-7704879 None:intergenic 25.0%
!! TAGAGAGTTTTCTCAATTTA+TGG + chr2.2:7706892-7706911 None:intergenic 25.0%
!! TCTAATGTTAAGACTTTTCA+AGG + chr2.2:7706634-7706653 None:intergenic 25.0%
!!! ACTAAATGTTACTTACCTTT+TGG + chr2.2:7701528-7701547 None:intergenic 25.0%
!!! GTGTTAATATCAATTGGTTT+TGG - chr2.2:7703952-7703971 MS.gene043550:intron 25.0%
!!! TATGACACATTTTAGAGTTT+TGG + chr2.2:7702591-7702610 None:intergenic 25.0%
!!! TTAATATCAATTGGTTTTGG+TGG - chr2.2:7703955-7703974 MS.gene043550:intron 25.0%
AAAAATGTTCCTTGATGTTC+TGG + chr2.2:7704027-7704046 None:intergenic 30.0%
AAACAAATTTAGATCAGGAG+AGG - chr2.2:7706587-7706606 MS.gene043550:intron 30.0%
AAACATCCAATTAAAGCAAG+AGG + chr2.2:7702089-7702108 None:intergenic 30.0%
AAACTTACACACACATAACA+CGG - chr2.2:7703667-7703686 MS.gene043550:intron 30.0%
AATTGATATGTACCCAATCT+TGG + chr2.2:7702738-7702757 None:intergenic 30.0%
ACATTGAAGATAATTTGGGT+TGG - chr2.2:7704106-7704125 MS.gene043550:intron 30.0%
ACCAAACATACACTTATTTG+TGG - chr2.2:7703760-7703779 MS.gene043550:intron 30.0%
ACCACAAATAAGTGTATGTT+TGG + chr2.2:7703764-7703783 None:intergenic 30.0%
AGTGACAAACTTGTGAAAAT+AGG - chr2.2:7706853-7706872 MS.gene043550:intron 30.0%
ATCTTAACCCAAAACCTTTA+AGG + chr2.2:7705436-7705455 None:intergenic 30.0%
ATTTAAATCCAAGTTAGGGT+CGG - chr2.2:7706681-7706700 MS.gene043550:intron 30.0%
CAGATGAGTGTTTAAGTATT+GGG - chr2.2:7701342-7701361 MS.gene043550:CDS 30.0%
CAGATTGTAAACATTGTTGT+TGG - chr2.2:7701817-7701836 MS.gene043550:CDS 30.0%
CATCTTAACTACTACAACTA+TGG + chr2.2:7705847-7705866 None:intergenic 30.0%
CATTTAGTCGATGATTGTTT+CGG - chr2.2:7701540-7701559 MS.gene043550:CDS 30.0%
CTTATATGCAATCACATTAG+TGG - chr2.2:7702182-7702201 MS.gene043550:intron 30.0%
GACATGTGTTGAATATTCTT+GGG - chr2.2:7707553-7707572 MS.gene043550:intron 30.0%
GAGGATTACTATACTACTAA+TGG - chr2.2:7704300-7704319 MS.gene043550:intron 30.0%
GATACCACTATTTAATGTGA+TGG + chr2.2:7702772-7702791 None:intergenic 30.0%
GCAATGATTTCAATGCTTAT+AGG - chr2.2:7707759-7707778 MS.gene043550:intron 30.0%
GCTCAGTTAAAAAATCATCA+TGG - chr2.2:7707232-7707251 MS.gene043550:intron 30.0%
GTCATTCTAAATAGACTCTA+AGG + chr2.2:7706110-7706129 None:intergenic 30.0%
GTGACAAACTTGTGAAAATA+GGG - chr2.2:7706854-7706873 MS.gene043550:intron 30.0%
GTGTACTTTGGTAAAAAGAA+AGG - chr2.2:7704676-7704695 MS.gene043550:intron 30.0%
GTGTCTTTATGACAGAAAAA+AGG + chr2.2:7703330-7703349 None:intergenic 30.0%
TAAAATAGGACATTTGGTAC+TGG + chr2.2:7703718-7703737 None:intergenic 30.0%
TAATTGGAATCCTACCATTA+TGG - chr2.2:7707295-7707314 MS.gene043550:intron 30.0%
TCAAGAAATGTGAGGAAAAT+GGG + chr2.2:7707462-7707481 None:intergenic 30.0%
TCAAGATACTTAGCAATGAA+TGG - chr2.2:7707098-7707117 MS.gene043550:intron 30.0%
TGATGAAATAAATCATGGCA+AGG - chr2.2:7707845-7707864 MS.gene043550:intron 30.0%
TGATGACTGATAGTTTATAG+CGG + chr2.2:7706053-7706072 None:intergenic 30.0%
TTACACCAGGAAAAAGATTA+AGG - chr2.2:7704355-7704374 MS.gene043550:intron 30.0%
TTCAGTAGATGATTAATGAG+TGG - chr2.2:7705212-7705231 MS.gene043550:CDS 30.0%
TTGCCATGATTTATTTCATC+AGG + chr2.2:7707846-7707865 None:intergenic 30.0%
! AAAGAGTGTATTGAAACATG+TGG - chr2.2:7702232-7702251 MS.gene043550:intron 30.0%
! AACTCTAAGAGCACAAATAT+CGG + chr2.2:7702844-7702863 None:intergenic 30.0%
! AAGTACCTTAATCTTTTTCC+TGG + chr2.2:7704363-7704382 None:intergenic 30.0%
! AGAGTTTTCTCAATTTATGG+TGG + chr2.2:7706889-7706908 None:intergenic 30.0%
! ATAAGTTTTCCCTTCTTCAT+TGG - chr2.2:7701383-7701402 MS.gene043550:CDS 30.0%
! CATTGAAGATAATTTGGGTT+GGG - chr2.2:7704107-7704126 MS.gene043550:intron 30.0%
! GTAAAAAGAAAGGTGTACTT+TGG - chr2.2:7704686-7704705 MS.gene043550:intron 30.0%
! GTTCATCCAAATTGATAACA+TGG - chr2.2:7704851-7704870 MS.gene043550:intron 30.0%
! TAATAGAATGTAACTTGTCC+AGG + chr2.2:7707702-7707721 None:intergenic 30.0%
! TAATTATAGGTATGGTAACG+GGG - chr2.2:7701710-7701729 MS.gene043550:CDS 30.0%
! TACTAATGGTGATGATGTTA+TGG - chr2.2:7704314-7704333 MS.gene043550:intron 30.0%
! TGAGTTCGGATTTTAAATTC+CGG + chr2.2:7702901-7702920 None:intergenic 30.0%
! TGTTTTCCTCTTGCTTTAAT+TGG - chr2.2:7702080-7702099 MS.gene043550:intron 30.0%
! TTAAGTAGTTTAAAGCACTC+AGG - chr2.2:7702442-7702461 MS.gene043550:intron 30.0%
! TTGCCTAACTGTTTTATAAC+GGG - chr2.2:7705548-7705567 MS.gene043550:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2.2:7706484-7706503 MS.gene043550:intron 30.0%
!! AACTAGCTGGGATTTTAAAA+TGG + chr2.2:7707410-7707429 None:intergenic 30.0%
!! ATCAAGGAACATTTTTCAAC+TGG - chr2.2:7704031-7704050 MS.gene043550:intron 30.0%
!! TGTTAAGACTTTTCAAGGTT+TGG + chr2.2:7706629-7706648 None:intergenic 30.0%
!! TTGCCTTATTTATAAGTGAG+AGG - chr2.2:7705394-7705413 MS.gene043550:CDS 30.0%
!!! ACTAGCTGGGATTTTAAAAT+GGG + chr2.2:7707409-7707428 None:intergenic 30.0%
!!! GTCTGTTAGTCTGTTATTTT+CGG + chr2.2:7706996-7707015 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2.2:7706483-7706502 None:intergenic 30.0%
AACGAGCTTATAGCTTATAG+CGG - chr2.2:7705963-7705982 MS.gene043550:intron 35.0%
AATAGCAATCCAAAGTAGCT+TGG - chr2.2:7707344-7707363 MS.gene043550:CDS 35.0%
ACAAACAAGCCAGTAAAAGT+TGG + chr2.2:7706738-7706757 None:intergenic 35.0%
ACTACAACTATGGACAATTG+TGG + chr2.2:7705837-7705856 None:intergenic 35.0%
ACTCCCATCACATTAAATAG+TGG - chr2.2:7702765-7702784 MS.gene043550:intron 35.0%
AGAGAGAGACTTGAAAATCA+TGG - chr2.2:7705161-7705180 MS.gene043550:CDS 35.0%
AGGAAACTCTTCTACATCAT+AGG - chr2.2:7707065-7707084 MS.gene043550:intron 35.0%
ATAACAGAAACAGAACTAGC+TGG + chr2.2:7707423-7707442 None:intergenic 35.0%
ATACCAACCAACACTAATTG+TGG + chr2.2:7707660-7707679 None:intergenic 35.0%
ATCCCCGTTATAAAACAGTT+AGG + chr2.2:7705554-7705573 None:intergenic 35.0%
ATGAAGAAGAATCATTGTCG+TGG - chr2.2:7705298-7705317 MS.gene043550:CDS 35.0%
CAAATTGGTACATATGCATG+TGG - chr2.2:7707611-7707630 MS.gene043550:intron 35.0%
CATGCACTTTAACATGACTT+GGG + chr2.2:7705883-7705902 None:intergenic 35.0%
CCAAACTCTCGATCATTATA+TGG + chr2.2:7701505-7701524 None:intergenic 35.0%
CCATATAATGATCGAGAGTT+TGG - chr2.2:7701502-7701521 MS.gene043550:CDS 35.0%
CTAATAGCATGAGTATCATG+TGG - chr2.2:7705733-7705752 MS.gene043550:intron 35.0%
CTGCGTCATTCTATTAGAAA+AGG + chr2.2:7706778-7706797 None:intergenic 35.0%
CTTTAATTGACCAAGTTCGT+AGG - chr2.2:7707805-7707824 MS.gene043550:intron 35.0%
GCAGATGAGTGTTTAAGTAT+TGG - chr2.2:7701341-7701360 MS.gene043550:CDS 35.0%
GCTGATCTATATGTAAATGC+AGG - chr2.2:7707160-7707179 MS.gene043550:intron 35.0%
GGACATGTGTTGAATATTCT+TGG - chr2.2:7707552-7707571 MS.gene043550:intron 35.0%
GGTCCTCTCACTTATAAATA+AGG + chr2.2:7705400-7705419 None:intergenic 35.0%
GTAAACTTAACTCGGTTGAT+AGG + chr2.2:7702943-7702962 None:intergenic 35.0%
GTCAAGAAATGTGAGGAAAA+TGG + chr2.2:7707463-7707482 None:intergenic 35.0%
TAAAAATTGCGGATAGCTGA+TGG + chr2.2:7706077-7706096 None:intergenic 35.0%
TAACAGAAACAGAACTAGCT+GGG + chr2.2:7707422-7707441 None:intergenic 35.0%
TAAGCTATAAGCTCGTTTCT+TGG + chr2.2:7705960-7705979 None:intergenic 35.0%
TACTAGAAGACCATAATGGT+AGG + chr2.2:7707308-7707327 None:intergenic 35.0%
TACTGGATGTTAGTAGTGTT+TGG - chr2.2:7707879-7707898 MS.gene043550:CDS 35.0%
TAGTGGTATCCAAATTGACA+AGG - chr2.2:7702782-7702801 MS.gene043550:intron 35.0%
TATCCAAATTGACAAGGTCT+GGG - chr2.2:7702788-7702807 MS.gene043550:intron 35.0%
TCATGCACTTTAACATGACT+TGG + chr2.2:7705884-7705903 None:intergenic 35.0%
TGAATCTAAGAGGCTCAAAT+TGG - chr2.2:7707596-7707615 MS.gene043550:intron 35.0%
TGATACACAACAAGAAGCAA+AGG + chr2.2:7701911-7701930 None:intergenic 35.0%
TGCATAACATGTGTTGAGTT+CGG + chr2.2:7702915-7702934 None:intergenic 35.0%
TGTGTTGAATATTCTTGGGA+TGG - chr2.2:7707557-7707576 MS.gene043550:intron 35.0%
TGTTTAGAGGTGAAAGATAG+AGG - chr2.2:7702700-7702719 MS.gene043550:intron 35.0%
TTAGGCAATGTTCGTTTGTT+AGG + chr2.2:7705536-7705555 None:intergenic 35.0%
TTCTAATAGAATGACGCAGT+TGG - chr2.2:7706779-7706798 MS.gene043550:intron 35.0%
TTGTAGCAGCAAACAGATAA+TGG - chr2.2:7705786-7705805 MS.gene043550:intron 35.0%
! AAGAAAGGTGTACTTTGGTT+TGG - chr2.2:7704691-7704710 MS.gene043550:intron 35.0%
! AAGCTACTTTGGATTGCTAT+TGG + chr2.2:7707345-7707364 None:intergenic 35.0%
! AATCTTTTTCCTGGTGTAAC+TGG + chr2.2:7704354-7704373 None:intergenic 35.0%
! ACTATTTAATGTGATGGGAG+TGG + chr2.2:7702766-7702785 None:intergenic 35.0%
! AGGATTTGGTATTTGTGTTG+TGG - chr2.2:7704134-7704153 MS.gene043550:intron 35.0%
! ATGAGTGGAGAAATTGCTTT+TGG - chr2.2:7705227-7705246 MS.gene043550:CDS 35.0%
! CTCAATGCCTTAAAGGTTTT+GGG - chr2.2:7705426-7705445 MS.gene043550:intron 35.0%
! GATGCATCTTGTGATAGTTT+TGG - chr2.2:7705571-7705590 MS.gene043550:intron 35.0%
! GCTTTGTTCGGTAAAAATTG+CGG + chr2.2:7706088-7706107 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr2.2:7706353-7706372 None:intergenic 35.0%
! GTTGTTTCCACAATTAGTGT+TGG - chr2.2:7707650-7707669 MS.gene043550:intron 35.0%
! TAACTGAGCCATCTGATTTT+AGG + chr2.2:7707221-7707240 None:intergenic 35.0%
! TAGGCAATGTTCGTTTGTTA+GGG + chr2.2:7705535-7705554 None:intergenic 35.0%
! TCAAACTTCAAACTTTGAGG+AGG - chr2.2:7704878-7704897 MS.gene043550:intron 35.0%
! TGCCTAACTGTTTTATAACG+GGG - chr2.2:7705549-7705568 MS.gene043550:intron 35.0%
! TGTACTTCAAGCTTTAGTGA+TGG - chr2.2:7707368-7707387 MS.gene043550:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr2.2:7706349-7706368 None:intergenic 35.0%
! TTCTTGTTGTGTATCATTGC+TGG - chr2.2:7701915-7701934 MS.gene043550:CDS 35.0%
!! ATAGACTCTAAGGCTTTGTT+CGG + chr2.2:7706100-7706119 None:intergenic 35.0%
!! ATGCATTTGGATTGGTTTAG+TGG + chr2.2:7704931-7704950 None:intergenic 35.0%
!! CAATTAGTGTTGGTTGGTAT+TGG - chr2.2:7707660-7707679 MS.gene043550:intron 35.0%
!! CTTTAAGGCATTGAGCTTAT+GGG + chr2.2:7705421-7705440 None:intergenic 35.0%
!! TTAGTGATGGATCGTTCATT+AGG - chr2.2:7707381-7707400 MS.gene043550:CDS 35.0%
!! TTTCCACAATTAGTGTTGGT+TGG - chr2.2:7707654-7707673 MS.gene043550:intron 35.0%
!! TTTTCAAGGTTTGGTAGTTC+TGG + chr2.2:7706620-7706639 None:intergenic 35.0%
!!! AAAGGTTTTGGGTTAAGATG+TGG - chr2.2:7705437-7705456 MS.gene043550:intron 35.0%
!!! CTAGCTGGGATTTTAAAATG+GGG + chr2.2:7707408-7707427 None:intergenic 35.0%
!!! CTGTTATTTTCGGCTCATTA+GGG + chr2.2:7706986-7707005 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + chr2.2:7706245-7706264 None:intergenic 35.0%
!!! TCTGTTATTTTCGGCTCATT+AGG + chr2.2:7706987-7707006 None:intergenic 35.0%
!!! TTTAGAGTTTTGGAAGAGTG+TGG + chr2.2:7702581-7702600 None:intergenic 35.0%
AAAAATGGTACGGCCATGTT+TGG + chr2.2:7706563-7706582 None:intergenic 40.0%
AACAGAGAATGAGCCAAAGA+AGG + chr2.2:7701887-7701906 None:intergenic 40.0%
AAGAGAGAGACCAATGAAGA+AGG + chr2.2:7701396-7701415 None:intergenic 40.0%
AAGGTGAATAAATGGAGTGC+CGG - chr2.2:7702879-7702898 MS.gene043550:intron 40.0%
AATATAGCAGTGACAGAAGC+AGG + chr2.2:7702019-7702038 None:intergenic 40.0%
AATCAGTACTCCTACGAACT+TGG + chr2.2:7707818-7707837 None:intergenic 40.0%
AGAGAGAGACCAATGAAGAA+GGG + chr2.2:7701395-7701414 None:intergenic 40.0%
ATAGCATGAGTATCATGTGG+TGG - chr2.2:7705736-7705755 MS.gene043550:intron 40.0%
ATGGATGAATTCTTGCTGCA+TGG + chr2.2:7703880-7703899 None:intergenic 40.0%
ATGTGGAAATGTCTGTGCTA+TGG - chr2.2:7707628-7707647 MS.gene043550:intron 40.0%
ATTGCTACGTTGCCAAGATT+GGG - chr2.2:7702723-7702742 MS.gene043550:intron 40.0%
CATTTAGGCTCTGTTTGACA+AGG - chr2.2:7705934-7705953 MS.gene043550:intron 40.0%
CCATAAGCTCAATGCCTTAA+AGG - chr2.2:7705419-7705438 MS.gene043550:CDS 40.0%
CTGCTCTTGTTGAATCTAAG+AGG - chr2.2:7707586-7707605 MS.gene043550:intron 40.0%
CTTAACAGTTGTAGCCTATG+AGG + chr2.2:7706941-7706960 None:intergenic 40.0%
GAAGTACAACCAAGCTACTT+TGG + chr2.2:7707356-7707375 None:intergenic 40.0%
GAGCTCATTGAGTGACAAAT+AGG + chr2.2:7701596-7701615 None:intergenic 40.0%
GATGCAGACCTAAAATCAGA+TGG - chr2.2:7707210-7707229 MS.gene043550:intron 40.0%
GATGTGCTCTTAAGAGATTG+TGG + chr2.2:7707735-7707754 None:intergenic 40.0%
GCAAGGTAGATAATGTGTAC+TGG - chr2.2:7707862-7707881 MS.gene043550:intron 40.0%
GTATCCAAATTGACAAGGTC+TGG - chr2.2:7702787-7702806 MS.gene043550:intron 40.0%
TAACACTCATATGGATGGCA+TGG + chr2.2:7702474-7702493 None:intergenic 40.0%
TATCGAGCTGAAAAGCTTCA+AGG - chr2.2:7704201-7704220 MS.gene043550:intron 40.0%
TGAAAAGCTTCAAGGAAGTG+CGG - chr2.2:7704209-7704228 MS.gene043550:intron 40.0%
TGGATGTTAGTAGTGTTTGG+AGG - chr2.2:7707882-7707901 MS.gene043550:CDS 40.0%
TTCAGAAGATCATCCACACT+AGG + chr2.2:7705491-7705510 None:intergenic 40.0%
TTGTTGCATCTGTTCGTAAG+TGG - chr2.2:7704253-7704272 MS.gene043550:intron 40.0%
TTTGACAAGCCAGAACATCA+AGG - chr2.2:7704015-7704034 MS.gene043550:intron 40.0%
! AAAGCCTAGAACAAAGCACT+AGG - chr2.2:7704654-7704673 MS.gene043550:intron 40.0%
! ACAAAGCACTAGGTGTACTT+TGG - chr2.2:7704664-7704683 MS.gene043550:intron 40.0%
! ACACTCATCTGCTTCTTTTG+AGG + chr2.2:7701333-7701352 None:intergenic 40.0%
! CAAACAGATAATGGTGGAGT+GGG - chr2.2:7705795-7705814 MS.gene043550:intron 40.0%
! GCTCAATGCCTTAAAGGTTT+TGG - chr2.2:7705425-7705444 MS.gene043550:CDS 40.0%
! GGAGAAGCTTTTCATTTTCC+TGG - chr2.2:7707681-7707700 MS.gene043550:intron 40.0%
! GGATTGCTATTGGAGTTGAT+AGG + chr2.2:7707335-7707354 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr2.2:7706350-7706369 None:intergenic 40.0%
! TAAGCTCTCATCTAGAGTTG+AGG - chr2.2:7704281-7704300 MS.gene043550:intron 40.0%
! TACACCTAGTGCTTTGTTCT+AGG + chr2.2:7704661-7704680 None:intergenic 40.0%
! TAGCAGCAAACAGATAATGG+TGG - chr2.2:7705789-7705808 MS.gene043550:intron 40.0%
! TTCGCTTTCTATGTTGCTTC+AGG - chr2.2:7704060-7704079 MS.gene043550:intron 40.0%
!! AAGTTCGTAGGAGTACTGAT+TGG - chr2.2:7707817-7707836 MS.gene043550:intron 40.0%
!! CCTTTAAGGCATTGAGCTTA+TGG + chr2.2:7705422-7705441 None:intergenic 40.0%
!! GATAATTTGGGTTGGGCTAT+AGG - chr2.2:7704114-7704133 MS.gene043550:intron 40.0%
!! GGAGAAATTGCTTTTGGTGT+TGG - chr2.2:7705233-7705252 MS.gene043550:CDS 40.0%
!! GGTGTGGTTGTTTTCTTATC+TGG - chr2.2:7704168-7704187 MS.gene043550:intron 40.0%
!! GTGGATTTTAGTCGCAATAG+TGG - chr2.2:7705317-7705336 MS.gene043550:CDS 40.0%
!! TAAAAGTTGGCTGGTCTAGA+TGG + chr2.2:7706725-7706744 None:intergenic 40.0%
!! TTAAGTATTGGGAGCAAACG+TGG - chr2.2:7701353-7701372 MS.gene043550:CDS 40.0%
!! TTGGATTGGTTTAGTGGTGT+TGG + chr2.2:7704925-7704944 None:intergenic 40.0%
!!! AGTTTTGGAAGAGTGTGGTA+TGG + chr2.2:7702576-7702595 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + chr2.2:7706246-7706265 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2.2:7706488-7706507 MS.gene043550:intron 40.0%
!!! GCATCTTGTGATAGTTTTGG+TGG - chr2.2:7705574-7705593 MS.gene043550:intron 40.0%
!!! TCTTGTGATAGTTTTGGTGG+TGG - chr2.2:7705577-7705596 MS.gene043550:intron 40.0%
AAATCCAAGTTAGGGTCGGT+AGG - chr2.2:7706685-7706704 MS.gene043550:intron 45.0%
AAGAGCAACCACAAGTGAGT+TGG + chr2.2:7705466-7705485 None:intergenic 45.0%
ACAAGCCAGTAAAAGTTGGC+TGG + chr2.2:7706734-7706753 None:intergenic 45.0%
ACTGTGTATTGGATCCCTGT+TGG + chr2.2:7703916-7703935 None:intergenic 45.0%
ACTTTCACCTTTGCACTTGC+AGG - chr2.2:7703804-7703823 MS.gene043550:intron 45.0%
ATCACATGCAAACCACCAAC+AGG - chr2.2:7703898-7703917 MS.gene043550:intron 45.0%
ATGCTATTAGCACATGCTCG+TGG + chr2.2:7705723-7705742 None:intergenic 45.0%
CATGTCCTACTCCTATTCGT+TGG + chr2.2:7707539-7707558 None:intergenic 45.0%
CTTTCACCTTTGCACTTGCA+GGG - chr2.2:7703805-7703824 MS.gene043550:intron 45.0%
GAATTCTTGCTGCATGGATG+AGG + chr2.2:7703874-7703893 None:intergenic 45.0%
GATTGCTACGTTGCCAAGAT+TGG - chr2.2:7702722-7702741 MS.gene043550:intron 45.0%
GCACTCTGTCAAGAAATGTG+AGG + chr2.2:7707470-7707489 None:intergenic 45.0%
TAGAATGACGCAGTTGGAAG+CGG - chr2.2:7706785-7706804 MS.gene043550:intron 45.0%
TCACATGCAAACCACCAACA+GGG - chr2.2:7703899-7703918 MS.gene043550:intron 45.0%
TCGTGGAGCACGATATAAGA+TGG + chr2.2:7705706-7705725 None:intergenic 45.0%
TGATCGAGAGTTTGGCCAAA+AGG - chr2.2:7701510-7701529 MS.gene043550:CDS 45.0%
TGATCTTCTGAACTCCAGTG+AGG - chr2.2:7705499-7705518 MS.gene043550:intron 45.0%
TGTCCCAGACCTTGTCAATT+TGG + chr2.2:7702794-7702813 None:intergenic 45.0%
! CTAGACCAGCCAACTTTTAC+TGG - chr2.2:7706726-7706745 MS.gene043550:intron 45.0%
! CTTTTTCCTGGTGTAACTGG+AGG + chr2.2:7704351-7704370 None:intergenic 45.0%
! GCAAACAGATAATGGTGGAG+TGG - chr2.2:7705794-7705813 MS.gene043550:intron 45.0%
!! ACTTGCAAGCACTGGAATAG+TGG - chr2.2:7701738-7701757 MS.gene043550:CDS 45.0%
!! ATCCTTGCTGACTCCTTCTT+TGG - chr2.2:7701871-7701890 MS.gene043550:CDS 45.0%
!! CTTGCAAGCACTGGAATAGT+GGG - chr2.2:7701739-7701758 MS.gene043550:CDS 45.0%
!! GTGGTGTTGGTTTGAGACTT+TGG + chr2.2:7704912-7704931 None:intergenic 45.0%
!! TGTTGGTGGTTTGCATGTGA+TGG + chr2.2:7703899-7703918 None:intergenic 45.0%
!! TTGGGTTGGGCTATAGGATT+TGG - chr2.2:7704120-7704139 MS.gene043550:intron 45.0%
!!! AGGAAGTGCGGTTTTGGATT+TGG - chr2.2:7704221-7704240 MS.gene043550:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2.2:7706487-7706506 MS.gene043550:intron 45.0%
!!! GGAAGTGCGGTTTTGGATTT+GGG - chr2.2:7704222-7704241 MS.gene043550:intron 45.0%
!!! TGTGTTGTGGCTGCTTTTGT+TGG - chr2.2:7704147-7704166 MS.gene043550:intron 45.0%
!!! AAATTTAATTTAACATTTTA+AGG + chr2.2:7706182-7706201 None:intergenic 5.0%
AGCCAAAGAAGGAGTCAGCA+AGG + chr2.2:7701876-7701895 None:intergenic 50.0%
ATTGTGCCCTGCAAGTGCAA+AGG + chr2.2:7703814-7703833 None:intergenic 50.0%
CCTACTCCTATTCGTTGGAG+CGG + chr2.2:7707534-7707553 None:intergenic 50.0%
CGTTACACAGCAGCATCACT+AGG - chr2.2:7703982-7704001 MS.gene043550:intron 50.0%
GCAAGGATTGCTGCAACAAG+TGG + chr2.2:7701859-7701878 None:intergenic 50.0%
GCATGAGTATCATGTGGTGG+TGG - chr2.2:7705739-7705758 MS.gene043550:intron 50.0%
GCTTCAGGAGCTGCATTAAC+TGG - chr2.2:7704075-7704094 MS.gene043550:intron 50.0%
GGTCTAGATGGTTGGACCTT+CGG + chr2.2:7706713-7706732 None:intergenic 50.0%
GTGTATTGGATCCCTGTTGG+TGG + chr2.2:7703913-7703932 None:intergenic 50.0%
GTGTTACCTCCAGTTACACC+AGG - chr2.2:7704342-7704361 MS.gene043550:intron 50.0%
TGGTTGCTCTTGACCTAGTG+TGG - chr2.2:7705475-7705494 MS.gene043550:intron 50.0%
TGTGGTGTCCAACTCACTTG+TGG - chr2.2:7705455-7705474 MS.gene043550:intron 50.0%
! ACAGAGTGCTATTGCCAGGT+TGG - chr2.2:7707481-7707500 MS.gene043550:CDS 50.0%
! AGTATTGGGAGCAAACGTGG+CGG - chr2.2:7701356-7701375 MS.gene043550:CDS 50.0%
! CAGGTTGGCATAAGGTTACC+GGG - chr2.2:7707496-7707515 MS.gene043550:CDS 50.0%
! CCAGGTTGGCATAAGGTTAC+CGG - chr2.2:7707495-7707514 MS.gene043550:CDS 50.0%
! CTTGACAGAGTGCTATTGCC+AGG - chr2.2:7707477-7707496 MS.gene043550:CDS 50.0%
! GCTATTGCCAGGTTGGCATA+AGG - chr2.2:7707488-7707507 MS.gene043550:CDS 50.0%
!! AGGGTTTGTTGAGTCCTCAC+TGG + chr2.2:7705516-7705535 None:intergenic 50.0%
!! AGTTGGCTGGTCTAGATGGT+TGG + chr2.2:7706721-7706740 None:intergenic 50.0%
!! GCTTCAAGGAAGTGCGGTTT+TGG - chr2.2:7704215-7704234 MS.gene043550:intron 50.0%
!!! TGTGGCTGCTTTTGTTGGTG+TGG - chr2.2:7704152-7704171 MS.gene043550:intron 50.0%
CCGCTCCAACGAATAGGAGT+AGG - chr2.2:7707531-7707550 MS.gene043550:CDS 55.0%
CCGGTAACCTTATGCCAACC+TGG + chr2.2:7707498-7707517 None:intergenic 55.0%
CCTATGCCGCTCCAACGAAT+AGG - chr2.2:7707525-7707544 MS.gene043550:CDS 55.0%
CCTATTCGTTGGAGCGGCAT+AGG + chr2.2:7707528-7707547 None:intergenic 55.0%
! GGGTTGTCACTTGCAAGCAC+TGG - chr2.2:7701730-7701749 MS.gene043550:CDS 55.0%
!! GTATCATGTGGTGGTGGTCG+TGG - chr2.2:7705745-7705764 MS.gene043550:intron 55.0%
GGCTCCTACCGACCCTAACT+TGG + chr2.2:7706692-7706711 None:intergenic 60.0%
TTAGGGTCGGTAGGAGCCGA+AGG - chr2.2:7706694-7706713 MS.gene043550:intron 60.0%
TTGGGAGCAAACGTGGCGGT+TGG - chr2.2:7701360-7701379 MS.gene043550:CDS 60.0%
! GAGCGGCATAGGCGTTTTCC+CGG + chr2.2:7707517-7707536 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 7701308 7707962 7701308 ID=MS.gene043550
chr2.2 mRNA 7701308 7707962 7701308 ID=MS.gene043550.t1;Parent=MS.gene043550
chr2.2 exon 7707866 7707962 7707866 ID=MS.gene043550.t1.exon1;Parent=MS.gene043550.t1
chr2.2 CDS 7707866 7707962 7707866 ID=cds.MS.gene043550.t1;Parent=MS.gene043550.t1
chr2.2 exon 7707334 7707551 7707334 ID=MS.gene043550.t1.exon2;Parent=MS.gene043550.t1
chr2.2 CDS 7707334 7707551 7707334 ID=cds.MS.gene043550.t1;Parent=MS.gene043550.t1
chr2.2 exon 7704894 7705444 7704894 ID=MS.gene043550.t1.exon3;Parent=MS.gene043550.t1
chr2.2 CDS 7704894 7705444 7704894 ID=cds.MS.gene043550.t1;Parent=MS.gene043550.t1
chr2.2 exon 7701308 7702088 7701308 ID=MS.gene043550.t1.exon4;Parent=MS.gene043550.t1
chr2.2 CDS 7701308 7702088 7701308 ID=cds.MS.gene043550.t1;Parent=MS.gene043550.t1
Gene Sequence

>MS.gene043550

ATGGATAGTAAGCTAGAAGCATCCTCAAAAGAAGCAGATGAGTGTTTAAGTATTGGGAGCAAACGTGGCGGTTGGATAAGTTTTCCCTTCTTCATTGGTCTCTCTCTTTTTCCTTTCATCTTTTAAGTCATTAAACATTATTAATTCACTCACTTTTACACATCTAAAGAGTATTTTTTTCTTTTGTGTCTTAACCATATAATGATCGAGAGTTTGGCCAAAAGGTAAGTAACATTTAGTCGATGATTGTTTCGGTTAGAATATGAATTCAGATCGATCTCATCACCTATTTGTCACTCAATGAGCTCATTCTTGAGCTCAATCACTTCATATACATGTCAAAAGCATGTCCATATTATTTAAATGGTTATATAAATATATTTTTTTGTTTATTTTGTTGATTAATTATAGGTATGGTAACGGGGTTGTCACTTGCAAGCACTGGAATAGTGGGAAACTTGATTGTATATCTTATAAGTGAATTCAATATCAAGAGCATCACTGCAGCTCAGATTGTAAACATTGTTGTTGGAAGCACAAGTCTCATTCCACTTGTTGCAGCAATCCTTGCTGACTCCTTCTTTGGCTCATTCTCTGTTGCCTTTGCTTCTTGTTGTGTATCATTGCTGGTAAACTATATTTATCTAAATCTATATATCTATATTATAATTATGTTAGGTTGCATATGCAAGCATTTTGTTGTTTTGTCCTGCTTCTGTCACTGCTATATTCTCCATTTCCTTTGTTTCTTTTTTAGTACTTTGAGATCAAATGTTTTCCTCTTGCTTTAATTGGATGTTTTTGAAGAAATTTTAATCAAATTTCATATTTTATCATGTTGATTAGCTTTGAAGAAATGATGAGTCCAATCAAACTTATATGCAATCACATTAGTGGAAGTACTCATTTAAGTTTCAACAAGTAAAAGAGTGTATTGAAACATGTGGCATGTCTTTACCTTAAAAGAAAGAATATTTATAAAAAGTTTCTTAATTTTGTAGTAATCTTATTTCTTTTTGCTTATAATTTCTTAGTAATTTTTGCTGACATTAGCGCTATAATTAAATTGCAATTTTTGTGATTCTTTTACGAGCTAATAATTTTTTTTAGGTAAAGAAAGGTAGTATATTTTTTTTAAGTAGTTTAAAGCACTCAGGTCACGTCCATGCCATCCATATGAGTGTTATAAATGAGTCTCTTATAATACTTTATATTACTTCATATTTTCTAATTATTTAAACATTTCAACTACATTTTTTAAACATCCATACCACACTCTTCCAAAACTCTAAAATGTGTCATACACTCATACTAATCTTACAATATACTTCCAATTATTGATTCATATCACTCTTTCAAATTATGTTTTTATGATATTAATTAATAAAATATTGTTTAGAGGTGAAAGATAGAGGATTGCTACGTTGCCAAGATTGGGTACATATCAATTTTTTGCCACTCCCATCACATTAAATAGTGGTATCCAAATTGACAAGGTCTGGGACATGTTGACAAAAACAAGTTAAGACACTTCCGATATTTGTGCTCTTAGAGTTAAAAATTCATATGTTAAGGTGAATAAATGGAGTGCCGGAATTTAAAATCCGAACTCAACACATGTTATGCAATGTTCCTATCAACCGAGTTAAGTTTACGAAGATAAATTAATATTTTTTTTATCTCAAAGTAAAACTAGTTTTAGAATCATGGTAGTTGATTCCAATTAATTTTTTTTTTTTTTTATCTCAGAGTAAAACTAGTTTTAGAATCATGGTAGTTGATTCCAATCAATTTTTTTTATCTCAAAGTAAAACTAGTTTTAGAATCATGGTAGTTGATTCCAATCAATTATATATATAATCTCAAAGTACACCTACTTGAATTTTTAATTATTTTTTATGTAACAAAATAGTTGAACATATGGAATATCTTTTAATTTTTATATAAGTTCAATCATGATTGAATAATTTAATCCTAGATCAATATTAAACATCAATGATTAACCATGTCTTTTTGTATCCTTTTTTCTGTCATAAAGACACATTATAAAAATAATAATATTTCAATCATTTTCATTTTAATTATTTCCATCAAGTTCAGATTTTTCTAAAAGATAGGACATACACTAAAACAACTAAACATTGACGTTGAGTCAATTTTTTTTGAACCAGAGACATAAAAATTAATATAAAAATAAAAGCTCTAAATTTTTATTTTTTTGGTAGTGCTCTAAATTTTTATTTTGTTAGAACCAATTCAAGTAAAAAAAATTTCGAACACATCAAAATTTTATAATTCTAATTAATTTCGTCATCTCGAAAAGTTCACTTTCTTTTTTGTTTTAAAGAGTATAACAACGAAACTTACACACACATAACACGGAGAATTGTATGTTCGAACTTGTGTTCCAGTACCAAATGTCCTATTTTACCATATGATTTGCATTTTCATAACCAAACATACACTTATTTGTGGTAAATAGCATCTCTCTTTTAAACTTTCACCTTTGCACTTGCAGGGCACAATTCTATTATTCTTGACGGCAACTATTAATTCACTAAAGCCTCATCCATGCAGCAAGAATTCATCCATCACATGCAAACCACCAACAGGGATCCAATACACAGTTTTATACATAAGCATAGTGTTAATATCAATTGGTTTTGGTGGTTCACGTTACACAGCAGCATCACTAGGTGCAAATCAGTTTGACAAGCCAGAACATCAAGGAACATTTTTCAACTGGTACTTTTTCGCTTTCTATGTTGCTTCAGGAGCTGCATTAACTGGAATTATTTACATTGAAGATAATTTGGGTTGGGCTATAGGATTTGGTATTTGTGTTGTGGCTGCTTTTGTTGGTGTGGTTGTTTTCTTATCTGGTTATCGATTTTATCGAGCTGAAAAGCTTCAAGGAAGTGCGGTTTTGGATTTGGGACGTGTTTTTGTTGCATCTGTTCGTAAGTGGAAGTGTAAGCTCTCATCTAGAGTTGAGGATTACTATACTACTAATGGTGATGATGTTATGGTTCAAGTGTTACCTCCAGTTACACCAGGAAAAAGATTAAGGTACTTTTTGGATTTGTTTCACTTAATTAAAATACATAAATTTTATATCAATAGATTGAATACTAAGTTATAGATATTTTGAGATTTGTCAGAGTTAATTGAATGTTATTTAAGATAGTTACAATCTTTAATTTTTTTTTTTAAGATAGTTACAAGTTAGTTATGATTAGCATATAGTTGGTTATATTTGTTACTTTACAATACTAAGTTTAATGAGTTTTTAATAAATATAAATATATAAAGATTGAGGATTAAAAAAAAAAATTATACTAATAAAAAAGCCTAGAACAAAGCACTAGGTGTACTTTGGTAAAAAGAAAGGTGTACTTTGGTTTGGTTATGTCAAGCTTACAACTGATGCTGATTTGTGATTTATCAACTTTACAAAAAGTTTACGATGACAATGCATCAAAATTAATATGTTAGATTAAATAACTCATTAATTATACTGTATTTTTTTATATAACTAAATTAGTTCATCCAAATTGATAACATGGAAAATCAAACTTCAAACTTTGAGGAGGAGCACACTCCAAAGTCTCAAACCAACACCACTAAACCAATCCAAATGCATTTATTAATTATACTTTATTAACTACAATTTTGAATGTTATACTTATATCTATCTATCTATCTATCTATCTATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTGAAAATCATGGTTAATTCTCTCTAAATGCATTGATGAAGTTCAGTAGATGATTAATGAGTGGAGAAATTGCTTTTGGTGTTGGAGTCCATTGTTGTGATGATTTTCTTTTTCTGTTTCAATAGAAATGAAGAAGAATCATTGTCGTGGATTTTAGTCGCAATAGTGGAGTGCTACTTTTTGATGTTAGACTCTATTGCGTAGCAAGTGTGAGTTAAAAATCTTGCCTTATTTATAAGTGAGAGGACCCATAAGCTCAATGCCTTAAAGGTTTTGGGTTAAGATGTGGTGTCCAACTCACTTGTGGTTGCTCTTGACCTAGTGTGGATGATCTTCTGAACTCCAGTGAGGACTCAACAAACCCTAACAAACGAACATTGCCTAACTGTTTTATAACGGGGATGCATCTTGTGATAGTTTTGGTGGTGGAGAAATCATTACAGTGATTTATTTTTTTGAAAGAAAATCATTACAGTAATTGTTGCTTCTTAAATTGAGGCTAAAATATTGAATATGACTTGAGATTTCAGCACCATCTTATATCGTGCTCCACGAGCATGTGCTAATAGCATGAGTATCATGTGGTGGTGGTCGTGGTCATATTTTTGTCTATAGTTGTAGCAGCAAACAGATAATGGTGGAGTGGGCAACTTTTAGTCATGACCACAATTGTCCATAGTTGTAGTAGTTAAGATGATAAACTAATGGACCCAAGTCATGTTAAAGTGCATGAACTTTTTTTTCTTCTTCTTCTTCTTTGATTCATTTAGGCTCTGTTTGACAAGGCCAAGAAACGAGCTTATAGCTTATAGCGGATAGCTTATAAGCTAATTTTACCAAATATTTCAATTAGTTTATCAGTTATAAGTCATCAGTTATCCGCTATAAACTATCAGTCATCAGCCATCAGCTATCCGCAATTTTTACCGAACAAAGCCTTAGAGTCTATTTAGAATGACTTATTTAAATTTATCTACTAACATAAGAATTTGTGAGACGGTAAGACAACCTTAAAATGTTAAATTAAATTTATCTATTGTTATATAAATAGCTTACACATAAATATTTACTCCCTCTGTTTCAAAATGAGTGTCGCTTTAGCAAAAAAAATTTGTTTCAAAATGAGTGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTCAATTGTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAATAACCATTCTCTTTCTCTTAATCATTGCATCTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTATATGATAAGCATTTACGCTATACTTCGCTTAATTAAACTGTTTATCCAAACATGGCCGTACCATTTTTATCTAAACAAATTTAGATCAGGAGAGGCACAATGCCAGAACTACCAAACCTTGAAAAGTCTTAACATTAGATATATAAGGTAACAGAAAAAAAATCGAATTTAAATCCAAGTTAGGGTCGGTAGGAGCCGAAGGTCCAACCATCTAGACCAGCCAACTTTTACTGGCTTGTTTGTTTCATTTCTTAGTTATGCCTTTTCTAATAGAATGACGCAGTTGGAAGCGGAAGCTAGCAAACGCTAAACTTAGATTGAAAAGAAACAAGTTTGCAAGTGACAAACTTGTGAAAATAGGGTTTCAGAATCCACCATAAATTGAGAAAACTCTCTAAAATCTTATTGAATGAATAAATATTGCCTCATAGGCTACAACTGTTAAGCTTAGATAGAAAAATAACAAAACCCTAATGAGCCGAAAATAACAGACTAACAGACTGAAACAAAAACTGAGATTACAAAATTGGGTTAAAATAATAAAATACTAAGGAAACTCTTCTACATCATAGGAACTAGAAGTTCAAGATACTTAGCAATGAATGGAGAATATACTTGAAACTATCTGCTATATATTAACAATGTGCTGATCTATATGTAAATGCAGGTTCTTCAATCGTGCAGCTCTGATAACTGATGCAGACCTAAAATCAGATGGCTCAGTTAAAAAATCATCATGGAGACTATGCACAGTTCAACAAGTCGAAGATTTCAAAAAAATAATTGGAATCCTACCATTATGGTCTTCTAGTATATTCCTATCAACTCCAATAGCAATCCAAAGTAGCTTGGTTGTACTTCAAGCTTTAGTGATGGATCGTTCATTAGGACCCCATTTTAAAATCCCAGCTAGTTCTGTTTCTGTTATAGTCTTTATATCAGCACCCATTTTCCTCACATTTCTTGACAGAGTGCTATTGCCAGGTTGGCATAAGGTTACCGGGAAAACGCCTATGCCGCTCCAACGAATAGGAGTAGGACATGTGTTGAATATTCTTGGGATGGTTGCTTCTGCTCTTGTTGAATCTAAGAGGCTCAAATTGGTACATATGCATGTGGAAATGTCTGTGCTATGGTTGTTTCCACAATTAGTGTTGGTTGGTATTGGAGAAGCTTTTCATTTTCCTGGACAAGTTACATTCTATTATCAACAATTTCCACAATCTCTTAAGAGCACATCAACTGCAATGATTTCAATGCTTATAGGGATTGCTTTTTATTTGAGCACTGCTTTAATTGACCAAGTTCGTAGGAGTACTGATTGGTTACCTGATGAAATAAATCATGGCAAGGTAGATAATGTGTACTGGATGTTAGTAGTGTTTGGAGGTATCAACTTTGTGTATTACTTACTTTGCTCTATTTCTTATATGTATGAAAATGTTTAA
Protein sequence

>MS.gene043550.t1

MDSKLEASSKEADECLSIGSKRGGWISFPFFIGMVTGLSLASTGIVGNLIVYLISEFNIKSITAAQIVNIVVGSTSLIPLVAAILADSFFGSFSVAFASCCVSLLGTILLFLTATINSLKPHPCSKNSSITCKPPTGIQYTVLYISIVLISIGFGGSRYTAASLGANQFDKPEHQGTFFNWYFFAFYVASGAALTGIIYIEDNLGWAIGFGICVVAAFVGVVVFLSGYRFYRAEKLQGSAVLDLGRVFVASVRKWKCKLSSRVEDYYTTNGDDVMVQVLPPVTPGKRLRFFNRAALITDADLKSDGSVKKSSWRLCTVQQVEDFKKIIGILPLWSSSIFLSTPIAIQSSLVVLQALVMDRSLGPHFKIPASSVSVIVFISAPIFLTFLDRVLLPGWHKVTGKTPMPLQRIGVGHVLNILGMVASALVESKRLKLVHMHVEMSVLWLFPQLVLVGIGEAFHFPGQVTFYYQQFPQSLKSTSTAMISMLIGIAFYLSTALIDQVRRSTDWLPDEINHGKVDNVYWMLVVFGGINFVYYLLCSISYMYENV