AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043168.t1 MTR_0294s0020 92.973 555 39 0 1 555 1 555 0.0 1036
MS.gene043168.t1 MTR_4g033315 86.715 557 72 1 1 555 1 557 0.0 977
MS.gene043168.t1 MTR_4g033310 86.715 557 72 1 1 555 1 557 0.0 977
MS.gene043168.t1 MTR_4g033325 87.634 558 63 3 1 555 1 555 0.0 977
MS.gene043168.t1 MTR_4g033330 87.430 533 65 1 1 531 1 533 0.0 931
MS.gene043168.t1 MTR_4g033395 83.735 498 77 3 1 494 1 498 0.0 855
MS.gene043168.t1 MTR_4g033375 84.538 498 73 3 1 494 1 498 0.0 855
MS.gene043168.t1 MTR_4g033325 87.359 443 50 3 116 555 18 457 0.0 790
MS.gene043168.t1 MTR_4g033325 87.558 434 48 3 125 555 1 431 0.0 776
MS.gene043168.t1 MTR_4g033385 83.521 443 70 2 116 555 16 458 0.0 774
MS.gene043168.t1 MTR_3g005010 65.556 540 177 4 13 550 12 544 0.0 707
MS.gene043168.t1 MTR_4g033310 86.842 304 38 1 254 555 190 493 0.0 550
MS.gene043168.t1 MTR_4g033310 87.500 192 24 0 1 192 1 192 2.09e-107 331
MS.gene043168.t1 MTR_8g038880 48.250 543 247 7 30 549 19 550 1.38e-167 488
MS.gene043168.t1 MTR_3g014790 44.602 565 267 11 17 552 5 552 2.71e-161 471
MS.gene043168.t1 MTR_7g067010 41.622 555 297 8 17 548 10 560 9.63e-156 457
MS.gene043168.t1 MTR_7g098200 40.827 556 303 6 17 549 15 567 9.91e-152 448
MS.gene043168.t1 MTR_4g015080 40.934 557 302 7 17 550 20 572 1.19e-151 447
MS.gene043168.t1 MTR_3g462710 41.935 558 295 9 17 549 10 563 4.75e-151 445
MS.gene043168.t1 MTR_7g098200 40.476 546 309 4 17 549 15 557 3.89e-150 444
MS.gene043168.t1 MTR_4g019580 39.677 557 305 7 17 550 22 570 7.00e-149 441
MS.gene043168.t1 MTR_3g069500 39.388 556 298 8 17 549 21 560 2.33e-148 439
MS.gene043168.t1 MTR_3g072300 39.928 556 311 5 17 551 10 563 1.75e-147 437
MS.gene043168.t1 MTR_3g069420 39.474 570 311 8 3 549 11 569 6.25e-146 433
MS.gene043168.t1 MTR_3g069440 39.643 560 301 10 17 549 19 568 9.48e-146 432
MS.gene043168.t1 MTR_1g041835 41.081 555 300 8 17 548 13 563 1.87e-143 426
MS.gene043168.t1 MTR_7g098180 39.497 557 310 5 17 549 17 570 3.13e-143 426
MS.gene043168.t1 MTR_7g065080 38.179 571 317 9 3 550 2 559 1.36e-142 424
MS.gene043168.t1 MTR_1g042310 39.568 556 308 7 17 548 12 563 2.43e-142 424
MS.gene043168.t1 MTR_7g098160 38.849 556 314 6 17 549 19 571 6.99e-140 418
MS.gene043168.t1 MTR_1g041815 40.360 555 304 8 17 548 13 563 1.04e-139 417
MS.gene043168.t1 MTR_7g098040 38.669 556 315 5 17 549 20 572 6.14e-139 416
MS.gene043168.t1 MTR_1g075440 38.129 556 316 7 17 548 14 565 2.41e-136 409
MS.gene043168.t1 MTR_7g098090 38.146 561 316 6 17 549 19 576 1.28e-134 405
MS.gene043168.t1 MTR_1g042310 39.619 525 289 7 48 548 6 526 5.37e-132 396
MS.gene043168.t1 MTR_1g041875 38.476 538 294 8 17 529 15 540 3.44e-131 395
MS.gene043168.t1 MTR_7g098230 37.383 535 309 6 38 549 33 564 5.41e-131 395
MS.gene043168.t1 MTR_1g042310 39.388 523 289 7 50 548 1 519 3.18e-130 391
MS.gene043168.t1 MTR_5g012270 37.828 571 322 8 12 553 10 576 2.18e-127 385
MS.gene043168.t1 MTR_7g098220 37.230 556 323 6 17 549 16 568 3.80e-127 385
MS.gene043168.t1 MTR_4g101380 39.716 564 302 8 21 551 17 575 8.65e-126 381
MS.gene043168.t1 MTR_5g012290 38.859 561 308 8 21 551 17 572 1.30e-123 375
MS.gene043168.t1 MTR_5g055000 37.209 559 312 10 28 552 15 568 3.38e-121 369
MS.gene043168.t1 MTR_1g041885 38.780 508 274 8 50 532 1 496 2.24e-120 365
MS.gene043168.t1 MTR_6g008690 36.364 539 305 9 36 550 12 536 7.26e-118 359
MS.gene043168.t1 MTR_3g112460 36.727 550 313 9 17 543 9 546 1.86e-116 357
MS.gene043168.t1 MTR_3g112470 36.727 550 313 9 17 543 9 546 3.85e-116 356
MS.gene043168.t1 MTR_7g065080 37.526 485 268 8 88 550 1 472 5.20e-116 353
MS.gene043168.t1 MTR_7g088825 36.413 552 316 10 29 551 20 565 6.91e-116 356
MS.gene043168.t1 MTR_7g010820 36.204 569 330 10 10 548 5 570 9.92e-116 355
MS.gene043168.t1 MTR_7g088820 35.035 568 330 11 1 539 1 558 5.40e-115 353
MS.gene043168.t1 MTR_7g098220 36.762 525 306 6 48 549 3 524 7.69e-115 352
MS.gene043168.t1 MTR_7g005930 34.608 549 325 9 23 546 27 566 1.08e-112 347
MS.gene043168.t1 MTR_5g014150 35.478 575 335 10 3 546 16 585 1.51e-111 345
MS.gene043168.t1 MTR_3g462710 41.244 434 234 7 133 549 25 454 2.89e-111 340
MS.gene043168.t1 MTR_7g088790 34.615 572 337 9 12 552 10 575 9.76e-109 338
MS.gene043168.t1 MTR_7g098200 38.158 456 256 6 117 549 1 453 1.51e-108 333
MS.gene043168.t1 MTR_4g107670 34.609 575 335 9 10 549 3 571 2.96e-108 335
MS.gene043168.t1 MTR_4g098800 35.179 560 322 10 16 544 21 570 4.22e-107 333
MS.gene043168.t1 MTR_4g098800 35.179 560 322 10 16 544 86 635 3.68e-106 333
MS.gene043168.t1 MTR_7g098150 38.652 445 247 5 17 438 19 460 4.20e-106 327
MS.gene043168.t1 MTR_3g112450 34.813 563 330 10 9 546 1 551 9.20e-105 326
MS.gene043168.t1 MTR_2g005130 35.116 561 327 9 10 549 19 563 1.02e-104 327
MS.gene043168.t1 MTR_5g038380 34.024 579 340 10 11 554 8 579 2.38e-104 325
MS.gene043168.t1 MTR_4g114340 38.628 554 305 9 16 543 9 553 3.11e-104 325
MS.gene043168.t1 MTR_5g038060 34.595 555 323 9 29 549 29 577 7.30e-104 325
MS.gene043168.t1 MTR_8g469310 35.263 570 326 9 18 552 13 574 1.89e-103 323
MS.gene043168.t1 MTR_1g116930 33.945 545 326 8 27 546 19 554 3.51e-103 323
MS.gene043168.t1 MTR_7g088820 35.081 496 289 9 73 539 5 496 9.33e-103 320
MS.gene043168.t1 MTR_7g013270 33.514 555 325 11 23 546 82 623 1.11e-102 323
MS.gene043168.t1 MTR_2g017750 32.997 594 349 12 2 552 4 591 7.10e-102 320
MS.gene043168.t1 MTR_8g087780 34.783 575 336 12 15 552 5 577 1.31e-99 313
MS.gene043168.t1 MTR_8g087810 34.896 576 335 11 15 552 5 578 1.88e-97 308
MS.gene043168.t1 MTR_3g100980 33.455 550 332 10 25 549 10 550 2.11e-96 305
MS.gene043168.t1 MTR_4g107510 33.333 552 326 10 35 550 40 585 4.25e-96 305
MS.gene043168.t1 MTR_5g085850 35.993 564 321 9 17 555 16 564 1.31e-95 303
MS.gene043168.t1 MTR_8g469480 33.394 554 329 9 35 555 42 588 1.30e-94 301
MS.gene043168.t1 MTR_1g026740 33.026 542 328 8 33 546 19 553 2.21e-94 299
MS.gene043168.t1 MTR_8g469470 32.028 562 341 9 23 548 24 580 2.43e-94 300
MS.gene043168.t1 MTR_4g107580 32.620 561 333 10 21 548 24 572 7.10e-94 299
MS.gene043168.t1 MTR_5g038190 30.919 566 355 7 15 549 8 568 1.69e-93 297
MS.gene043168.t1 MTR_1g026750 32.799 561 340 9 16 546 1 554 4.42e-93 296
MS.gene043168.t1 MTR_4g123537 33.032 554 340 11 18 550 28 571 4.57e-93 297
MS.gene043168.t1 MTR_1g026770 32.784 546 335 8 27 546 11 550 1.98e-92 294
MS.gene043168.t1 MTR_8g103233 32.721 544 337 10 28 546 14 553 1.76e-91 292
MS.gene043168.t1 MTR_7g006540 31.495 562 340 11 30 553 62 616 2.65e-91 293
MS.gene043168.t1 MTR_3g100980 32.062 577 330 12 25 548 10 577 2.38e-90 290
MS.gene043168.t1 MTR_4g107530 32.762 583 343 12 3 550 14 582 6.64e-89 286
MS.gene043168.t1 MTR_1g009200 31.993 572 343 12 4 546 10 564 7.24e-89 285
MS.gene043168.t1 MTR_7g088820 33.853 449 264 9 120 539 4 448 1.23e-87 279
MS.gene043168.t1 MTR_4g107610 30.479 584 364 10 3 553 2 576 3.42e-86 279
MS.gene043168.t1 MTR_7g064780 28.496 565 362 8 17 547 12 568 4.84e-85 275
MS.gene043168.t1 MTR_7g111260 31.365 542 343 9 29 551 17 548 1.66e-84 274
MS.gene043168.t1 MTR_2g101650 30.660 561 351 12 17 546 10 563 8.43e-84 272
MS.gene043168.t1 MTR_1g085090 30.216 556 357 11 17 551 3 548 1.87e-83 272
MS.gene043168.t1 MTR_4g011280 31.646 553 339 12 25 548 27 569 2.48e-83 271
MS.gene043168.t1 MTR_2g101590 32.578 574 340 17 10 548 4 565 1.30e-82 270
MS.gene043168.t1 MTR_2g101610 30.890 573 352 14 10 548 4 566 8.41e-81 266
MS.gene043168.t1 MTR_7g098210 31.721 517 261 9 50 549 1 442 3.28e-80 259
MS.gene043168.t1 MTR_7g064800 29.264 557 350 8 27 547 22 570 3.12e-77 255
MS.gene043168.t1 MTR_2g101640 28.924 567 365 9 10 546 4 562 6.53e-77 255
MS.gene043168.t1 MTR_1g057460 30.627 542 341 13 25 548 40 564 2.06e-74 247
MS.gene043168.t1 MTR_2g101560 30.000 570 357 13 12 548 6 566 4.01e-74 248
MS.gene043168.t1 MTR_4g024930 29.891 552 344 13 17 546 22 552 1.41e-73 245
MS.gene043168.t1 MTR_1g057460 30.118 508 322 11 59 548 1 493 1.99e-71 237
MS.gene043168.t1 MTR_2g093640 31.119 572 333 13 16 550 1 548 2.85e-69 233
MS.gene043168.t1 MTR_2g093160 30.123 571 340 12 16 550 1 548 1.25e-68 231
MS.gene043168.t1 MTR_2g093180 30.662 574 334 14 16 550 1 549 5.35e-68 229
MS.gene043168.t1 MTR_0236s0050 28.740 508 329 10 59 548 1 493 1.37e-67 227
MS.gene043168.t1 MTR_7g051880 28.864 537 353 7 17 546 11 525 1.01e-65 223
MS.gene043168.t1 MTR_7g052600 28.678 537 354 8 17 546 11 525 7.43e-64 218
MS.gene043168.t1 MTR_7g051830 28.492 537 355 7 17 546 11 525 9.07e-63 215
MS.gene043168.t1 MTR_4g033390 92.222 90 7 0 464 553 30 119 1.21e-55 183
MS.gene043168.t1 MTR_1g009170 28.678 401 229 11 141 529 3 358 1.06e-42 157
MS.gene043168.t1 MTR_3g065350 37.267 161 93 4 316 476 1 153 1.44e-28 112
MS.gene043168.t1 MTR_7g064160 27.273 99 72 0 17 115 15 113 4.34e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043168.t1 AT1G22540 63.437 547 186 4 10 547 9 550 0.0 675
MS.gene043168.t1 AT1G72125 56.498 554 228 5 12 554 10 561 0.0 611
MS.gene043168.t1 AT1G72140 56.307 547 213 4 16 549 19 552 0.0 609
MS.gene043168.t1 AT1G72120 57.271 557 227 6 1 550 1 553 0.0 608
MS.gene043168.t1 AT1G22550 55.044 565 232 6 1 550 3 560 0.0 600
MS.gene043168.t1 AT1G22570 55.515 553 222 7 16 550 15 561 0.0 578
MS.gene043168.t1 AT1G22570 55.028 527 213 7 42 550 4 524 0.0 544
MS.gene043168.t1 AT1G72130 54.631 529 218 6 29 551 23 535 0.0 542
MS.gene043168.t1 AT3G54450 43.750 544 271 8 29 549 11 542 1.00e-166 485
MS.gene043168.t1 AT5G01180 40.957 564 305 8 10 549 4 563 4.97e-151 445
MS.gene043168.t1 AT5G01180 40.957 564 305 8 10 549 4 563 4.97e-151 445
MS.gene043168.t1 AT5G01180 40.957 564 305 8 10 549 4 563 4.97e-151 445
MS.gene043168.t1 AT2G02040 40.522 575 302 9 3 546 13 578 7.75e-151 445
MS.gene043168.t1 AT3G54140 41.113 557 299 7 17 548 10 562 2.91e-150 443
MS.gene043168.t1 AT3G54140 41.113 557 299 7 17 548 10 562 2.91e-150 443
MS.gene043168.t1 AT1G72130 52.074 434 186 6 125 552 1 418 1.99e-146 428
MS.gene043168.t1 AT1G72130 52.074 434 186 6 125 552 1 418 1.99e-146 428
MS.gene043168.t1 AT2G37900 41.197 568 288 11 10 549 17 566 2.31e-143 426
MS.gene043168.t1 AT3G53960 38.783 575 314 9 3 549 9 573 1.72e-142 424
MS.gene043168.t1 AT1G62200 39.506 567 300 8 3 539 24 577 6.40e-141 420
MS.gene043168.t1 AT2G40460 40.323 558 308 7 11 549 4 555 3.49e-138 413
MS.gene043168.t1 AT2G02020 40.000 560 297 9 1 548 10 542 8.36e-138 410
MS.gene043168.t1 AT1G62200 37.584 596 300 8 3 539 24 606 2.88e-135 407
MS.gene043168.t1 AT1G62200 37.584 596 300 8 3 539 38 620 3.59e-135 407
MS.gene043168.t1 AT5G46040 38.692 535 303 6 17 529 13 544 1.56e-131 396
MS.gene043168.t1 AT5G46050 37.477 555 320 6 17 548 13 563 2.11e-129 390
MS.gene043168.t1 AT2G02020 38.571 560 284 10 1 548 10 521 2.75e-125 378
MS.gene043168.t1 AT5G14940 37.662 539 310 7 29 546 5 538 1.46e-123 374
MS.gene043168.t1 AT2G37900 41.071 504 251 11 74 549 2 487 8.78e-122 368
MS.gene043168.t1 AT3G01350 36.832 543 307 8 33 544 9 546 4.55e-117 358
MS.gene043168.t1 AT1G69870 37.251 553 310 10 28 549 48 594 2.84e-115 355
MS.gene043168.t1 AT1G68570 38.404 539 301 6 40 549 32 568 1.60e-113 350
MS.gene043168.t1 AT1G68570 38.390 534 298 6 45 549 7 538 4.31e-113 348
MS.gene043168.t1 AT1G12110 35.739 582 324 12 3 551 7 571 2.16e-110 342
MS.gene043168.t1 AT1G32450 35.284 564 326 9 17 546 23 581 3.14e-110 342
MS.gene043168.t1 AT4G21680 35.524 563 328 11 17 548 14 572 1.14e-106 332
MS.gene043168.t1 AT2G26690 36.937 555 312 11 16 543 9 552 8.03e-105 327
MS.gene043168.t1 AT1G69850 32.650 585 348 9 9 552 3 582 1.43e-100 316
MS.gene043168.t1 AT3G21670 36.396 555 312 10 21 549 19 558 1.11e-99 314
MS.gene043168.t1 AT1G33440 35.889 574 314 11 7 546 14 567 3.36e-99 313
MS.gene043168.t1 AT1G27040 32.574 571 359 8 6 555 2 567 6.36e-99 311
MS.gene043168.t1 AT1G59740 34.116 554 325 10 20 544 30 572 2.08e-98 310
MS.gene043168.t1 AT1G27040 32.857 560 350 8 17 555 9 563 3.32e-98 309
MS.gene043168.t1 AT1G18880 32.734 556 331 11 35 555 23 570 1.06e-95 303
MS.gene043168.t1 AT5G46050 36.123 454 263 6 119 549 3 452 3.73e-95 298
MS.gene043168.t1 AT2G26690 36.364 528 298 11 43 543 3 519 5.77e-95 300
MS.gene043168.t1 AT1G52190 32.841 542 324 9 40 546 30 566 4.84e-94 300
MS.gene043168.t1 AT3G16180 33.034 557 331 11 25 546 16 565 5.23e-94 299
MS.gene043168.t1 AT5G62730 31.625 566 356 9 1 548 32 584 2.96e-93 297
MS.gene043168.t1 AT1G27040 32.959 534 332 8 43 555 7 535 8.45e-92 291
MS.gene043168.t1 AT5G19640 33.456 544 311 13 32 546 60 581 2.66e-91 292
MS.gene043168.t1 AT2G26690 35.977 517 293 11 54 543 2 507 4.64e-90 287
MS.gene043168.t1 AT5G62680 32.240 549 335 10 35 549 47 592 1.81e-88 285
MS.gene043168.t1 AT5G13400 30.605 562 354 8 20 548 52 610 3.68e-87 282
MS.gene043168.t1 AT1G27080 32.504 563 333 12 18 549 2 548 5.55e-87 280
MS.gene043168.t1 AT5G62730 31.638 531 338 8 37 549 3 526 7.34e-87 278
MS.gene043168.t1 AT3G47960 32.058 549 334 11 35 549 65 608 8.74e-85 276
MS.gene043168.t1 AT1G69860 32.110 545 325 11 35 550 22 550 7.75e-80 261
MS.gene043168.t1 AT5G28470 29.910 555 348 13 28 551 14 558 1.44e-79 260
MS.gene043168.t1 AT3G25280 31.903 536 330 11 21 546 11 521 1.91e-79 259
MS.gene043168.t1 AT1G27080 32.370 519 305 11 62 549 3 506 1.10e-78 257
MS.gene043168.t1 AT5G28470 29.730 555 347 14 28 551 14 556 5.15e-77 254
MS.gene043168.t1 AT3G25260 30.571 543 340 11 12 546 2 515 1.02e-74 246
MS.gene043168.t1 AT3G45710 30.672 551 325 12 31 550 21 545 3.06e-68 230
MS.gene043168.t1 AT3G45680 30.541 573 338 16 11 553 2 544 6.21e-68 229
MS.gene043168.t1 AT3G45650 28.980 559 354 13 17 553 8 545 1.95e-67 228
MS.gene043168.t1 AT3G45660 29.787 517 318 10 58 550 48 543 1.07e-65 223
MS.gene043168.t1 AT3G45660 29.787 517 318 10 58 550 48 543 1.07e-65 223
MS.gene043168.t1 AT3G45660 29.787 517 318 10 58 550 69 564 1.98e-65 223
MS.gene043168.t1 AT3G45700 29.650 543 336 11 30 550 15 533 5.24e-65 221
MS.gene043168.t1 AT5G11570 26.958 549 317 9 9 546 1 476 5.98e-64 217
MS.gene043168.t1 AT3G45650 27.959 583 355 13 17 553 8 571 8.98e-62 214
MS.gene043168.t1 AT3G45720 29.228 544 326 15 40 553 28 542 1.53e-60 209
MS.gene043168.t1 AT3G45690 29.456 533 293 15 30 538 17 490 5.01e-56 197
MS.gene043168.t1 AT2G38100 27.553 519 311 17 59 548 2 484 9.52e-44 163
MS.gene043168.t1 AT2G38100 27.553 519 311 17 59 548 18 500 2.14e-43 162
MS.gene043168.t1 AT2G38100 27.553 519 311 17 59 548 24 506 2.26e-43 162

Find 103 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCTACAACTTTGGTTTA+TGG 0.167031 4.2:-71437618 MS.gene043168:CDS
CTAGAAGCTCATTCTTTAAT+TGG 0.184688 4.2:-71438316 MS.gene043168:CDS
AAACCTTGTGTTCAAGCTTT+TGG 0.192944 4.2:-71438380 MS.gene043168:CDS
TACTAAGGTTGGTTCCAATT+TGG 0.203651 4.2:-71437638 MS.gene043168:CDS
GATAACTATAGTTGGATTCT+TGG 0.220654 4.2:-71438233 MS.gene043168:CDS
CCCATGCTTCTTAGTTCATT+TGG 0.244157 4.2:+71437168 None:intergenic
CACAAATATCCGGTCGTAGA+TGG 0.247206 4.2:+71437461 None:intergenic
GCAGAGAGGATATCATATTT+TGG 0.269709 4.2:-71442130 MS.gene043168:CDS
TATAGTTGGATTCTTGGATT+TGG 0.272236 4.2:-71438227 MS.gene043168:CDS
GACATATAGGTTTAACATTA+AGG 0.274752 4.2:-71438150 MS.gene043168:CDS
TTAGGTCCAAATCTGGTTAT+TGG 0.278576 4.2:-71442969 MS.gene043168:CDS
CCATGCTTCTTAGTTCATTT+GGG 0.297304 4.2:+71437169 None:intergenic
ACCAAAGTTGTAGCCCAAAT+TGG 0.299132 4.2:+71437624 None:intergenic
TCCAATTTGGGCTACAACTT+TGG 0.299380 4.2:-71437625 MS.gene043168:CDS
ACTACAAGTCTCGTCTTCTT+TGG 0.301060 4.2:+71437689 None:intergenic
ACTAAGGTTGGTTCCAATTT+GGG 0.303752 4.2:-71437637 MS.gene043168:CDS
CGCATTGGAACAGTTGCATT+TGG 0.309636 4.2:+71437282 None:intergenic
ATCACATTGCTTCAAAGAAT+TGG 0.335669 4.2:-71437402 MS.gene043168:CDS
TGCTTCTCTTATCTACATAT+TGG 0.343615 4.2:-71441945 MS.gene043168:intron
GCACTCTATTTGAGTATTGT+TGG 0.352342 4.2:-71437141 MS.gene043168:CDS
CAACTGTTCCAATGCGTATA+TGG 0.357493 4.2:-71437275 MS.gene043168:CDS
ATGCAGAAAACAATAGTTCC+TGG 0.369097 4.2:-71437546 MS.gene043168:CDS
TTCAATATCCGCTGTTGATA+AGG 0.369755 4.2:+71438058 None:intergenic
GCTCAGTTAGCTCTTGTTGA+TGG 0.370280 4.2:-71443021 MS.gene043168:CDS
TCGTTGCAGCTGTAAGAAAT+TGG 0.371085 4.2:-71438088 MS.gene043168:CDS
AGATCTGCTTGGTTTATCAT+AGG 0.387829 4.2:-71442946 MS.gene043168:intron
GCTTCTCTACTTCCTCTGTT+AGG 0.391870 4.2:-71442016 MS.gene043168:CDS
AGATCTCCAATAACCAGATT+TGG 0.397667 4.2:+71442963 None:intergenic
CTGCATAGAACTCCCTTGCT+TGG 0.411271 4.2:+71437563 None:intergenic
TCGTCTTCTTTGGATCCCTT+TGG 0.422330 4.2:+71437699 None:intergenic
AACTTGATATCATATCTAAC+AGG 0.425289 4.2:-71442097 MS.gene043168:CDS
ACAAATATCCGGTCGTAGAT+GGG 0.426366 4.2:+71437462 None:intergenic
GTTCTGTGACAATATCAATA+AGG 0.432594 4.2:-71437043 MS.gene043168:CDS
CTTGCTGGATTAAGTGTCAT+GGG 0.435853 4.2:-71436994 MS.gene043168:CDS
TGCTTGGAACAAGGACATAT+AGG 0.436907 4.2:-71438163 MS.gene043168:CDS
ATATTCAAGATAACTATAGT+TGG 0.443049 4.2:-71438241 MS.gene043168:CDS
CACAAAGGTATCATCTCATA+AGG 0.449090 4.2:-71436928 None:intergenic
CTGCTAAGAATGTCAATGTT+TGG 0.449566 4.2:-71442048 MS.gene043168:CDS
TTGCTAGTGGCACAAATATC+CGG 0.464706 4.2:+71437451 None:intergenic
GAAGCTCATTCTTTAATTGG+TGG 0.474451 4.2:-71438313 MS.gene043168:CDS
TCTACATTCTTCACCAAGCA+AGG 0.478008 4.2:-71437576 MS.gene043168:CDS
AAGAATGTCAATGTTTGGTC+TGG 0.481539 4.2:-71442043 MS.gene043168:CDS
CCTGCCGTTAGGTCCAAATC+TGG 0.487726 4.2:-71442976 MS.gene043168:CDS
CTGGTTATTGGAGATCTGCT+TGG 0.488542 4.2:-71442957 MS.gene043168:CDS
ACTTGCTGGATTAAGTGTCA+TGG 0.493666 4.2:-71436995 MS.gene043168:CDS
AGCATCTAACAACACTTCGT+TGG 0.504787 4.2:+71443041 None:intergenic
GTTATCGTTTGAAGAGAGGC+AGG 0.510826 4.2:+71437510 None:intergenic
GTAAAGATGGTCATGAAAGT+TGG 0.510870 4.2:-71437065 MS.gene043168:CDS
TCACTCTATCTAGTTGCCAT+TGG 0.515187 4.2:-71438416 MS.gene043168:CDS
TACTATGGTTGCAGGTGCCA+CGG 0.515339 4.2:-71438285 MS.gene043168:CDS
CTTCTAGCTATATGCTCCTC+GGG 0.515744 4.2:+71438332 None:intergenic
GTTGCAGTGCTTTGTTTGAG+TGG 0.521993 4.2:+71442073 None:intergenic
TAATATAATTTACAGGGACT+AGG 0.523704 4.2:-71438515 MS.gene043168:intron
ACAGAGGACAACCTGCCGTT+AGG 0.526080 4.2:-71442987 MS.gene043168:CDS
AAAGAAAACAATGGCGACAT+TGG 0.528764 4.2:+71437488 None:intergenic
GTTATGTTTAGGTGTGGAAG+TGG 0.532182 4.2:-71442152 MS.gene043168:intron
ACACGGCCGATTCTAAGAAA+AGG 0.535424 4.2:+71438113 None:intergenic
TTGCTTCAAAGAATTGGCAC+TGG 0.536263 4.2:-71437396 MS.gene043168:CDS
CCCAAATGAACTAAGAAGCA+TGG 0.542573 4.2:-71437169 MS.gene043168:CDS
TATTTGAGTATTGTTGGTGT+TGG 0.547399 4.2:-71437135 MS.gene043168:CDS
AAGAAGCAAAGGCAGTACTA+AGG 0.553947 4.2:-71437653 MS.gene043168:CDS
ATTATCACTGGAAAACCCTC+AGG 0.554862 4.2:-71437426 MS.gene043168:CDS
ATCAACCACCATATACGCAT+TGG 0.557984 4.2:+71437267 None:intergenic
TTACAGCTGCAACGAATACA+CGG 0.559250 4.2:+71438096 None:intergenic
CCAGTGATAATTCTTGCTAG+TGG 0.559402 4.2:+71437438 None:intergenic
CAGTGAGATCGAAGAAGCAA+AGG 0.559693 4.2:-71437664 MS.gene043168:CDS
GCCCCAAAAGCTTGAACACA+AGG 0.560276 4.2:+71438377 None:intergenic
AGCAAAGGCAGTACTAAGGT+TGG 0.564362 4.2:-71437649 MS.gene043168:CDS
CCACTAGCAAGAATTATCAC+TGG 0.568272 4.2:-71437438 MS.gene043168:CDS
GCTTCTAGCTATATGCTCCT+CGG 0.569783 4.2:+71438331 None:intergenic
TCTTTAGCCCCATCTACGAC+CGG 0.571252 4.2:-71437470 MS.gene043168:CDS
CAAGGGCAGGTTCCTCAACA+TGG 0.573606 4.2:-71437733 MS.gene043168:intron
GGTGTTGGAAGCTTTCTAAG+TGG 0.575161 4.2:-71437120 MS.gene043168:CDS
TTGCTGGATTAAGTGTCATG+GGG 0.576133 4.2:-71436993 MS.gene043168:CDS
TTTATGTCCACCTTGTCCAA+TGG 0.576173 4.2:+71438400 None:intergenic
GTAGAACAAGATGTGAGTGA+AGG 0.576984 4.2:+71438467 None:intergenic
ACTCCAAACAGAAAATATTG+AGG 0.578463 4.2:+71437243 None:intergenic
CCAGATTTGGACCTAACGGC+AGG 0.579651 4.2:+71442976 None:intergenic
CCAAATGAACTAAGAAGCAT+GGG 0.579849 4.2:-71437168 MS.gene043168:CDS
ACAGCGGATATTGAAGAGGA+TGG 0.580451 4.2:-71438050 MS.gene043168:CDS
ATTGGTTATCGTTTGAAGAG+AGG 0.586290 4.2:+71437506 None:intergenic
TATCTAGTTGCCATTGGACA+AGG 0.587068 4.2:-71438410 MS.gene043168:CDS
CTACATTCTTCACCAAGCAA+GGG 0.587319 4.2:-71437575 MS.gene043168:CDS
ATGGCATTGCTAAAACCAAA+GGG 0.587457 4.2:-71437714 MS.gene043168:CDS
CAAATATCCGGTCGTAGATG+GGG 0.603716 4.2:+71437463 None:intergenic
TCTTGAATATAAGTCAAGAT+CGG 0.606815 4.2:+71438254 None:intergenic
CATGGCATTGCTAAAACCAA+AGG 0.607241 4.2:-71437715 MS.gene043168:CDS
TGAAGCAATGTGATGCCTGA+GGG 0.609507 4.2:+71437411 None:intergenic
TAGGTGTGGAAGTGGCAGAG+AGG 0.610679 4.2:-71442144 MS.gene043168:CDS
ATCAACAGCGGATATTGAAG+AGG 0.620450 4.2:-71438054 MS.gene043168:CDS
ATAACCAGATTTGGACCTAA+CGG 0.623405 4.2:+71442972 None:intergenic
CAAGATCGGAAGTGTTGCCG+TGG 0.640514 4.2:+71438268 None:intergenic
TTGAAGCAATGTGATGCCTG+AGG 0.641335 4.2:+71437410 None:intergenic
GCAGGAGGTATGTCGAAACC+AGG 0.642425 4.2:+71437528 None:intergenic
TCTTACATTTATAATCACAA+AGG 0.646420 4.2:-71436943 MS.gene043168:CDS
GAGAAGCAAGTATGATTGTG+CGG 0.648087 4.2:+71441960 None:intergenic
CTAGTTGCCATTGGACAAGG+TGG 0.650474 4.2:-71438407 MS.gene043168:CDS
GCAATGAAAGCACCTAACAG+AGG 0.656054 4.2:+71442004 None:intergenic
ATCGTTTGAAGAGAGGCAGG+AGG 0.679134 4.2:+71437513 None:intergenic
GATGGGGCTAAAGAAAACAA+TGG 0.689663 4.2:+71437479 None:intergenic
CTGTTCCAATGCGTATATGG+TGG 0.698612 4.2:-71437272 MS.gene043168:CDS
GCGAAACACCTTATCAACAG+CGG 0.714560 4.2:-71438066 MS.gene043168:CDS
GATGGAGTCGTTGACTACAG+AGG 0.727981 4.2:-71443003 MS.gene043168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAATCCATATTAAAA+TGG + chr4.2:71437484-71437503 None:intergenic 10.0%
!! TCAAAAAAAAAAAAAAAAAG+TGG + chr4.2:71438957-71438976 None:intergenic 10.0%
!!! ACTTTTTTTTTTTTTTTTTG+AGG - chr4.2:71438956-71438975 MS.gene043168:intron 10.0%
!!! ATTTATACTATATTTTATTC+CGG - chr4.2:71438771-71438790 MS.gene043168:intron 10.0%
!!! ATTTTGTTTATATTTCATAT+CGG + chr4.2:71438523-71438542 None:intergenic 10.0%
!! AAATTATCCTTATTAACTAT+TGG + chr4.2:71439981-71440000 None:intergenic 15.0%
!! AAGATGATATAAAATTGATT+TGG + chr4.2:71437444-71437463 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr4.2:71439980-71439999 MS.gene043168:intron 15.0%
!! AATGATTAAAAGAAAAAGAA+TGG + chr4.2:71440014-71440033 None:intergenic 15.0%
!! AATGTGAAAAGTAAATATAT+AGG + chr4.2:71437770-71437789 None:intergenic 15.0%
!! ATAACATAGATAATTAATTG+TGG + chr4.2:71441360-71441379 None:intergenic 15.0%
!! ATGTATGTTTAGAAATTATT+CGG - chr4.2:71440495-71440514 MS.gene043168:intron 15.0%
!! ATGTGAAAAGTAAATATATA+GGG + chr4.2:71437769-71437788 None:intergenic 15.0%
!! ATTATAGGAAAATATGTTTA+AGG - chr4.2:71438418-71438437 MS.gene043168:CDS 15.0%
!! CAACAATATAACATTATTAT+AGG - chr4.2:71438403-71438422 MS.gene043168:CDS 15.0%
!! CAATTAATTATCTATGTTAT+AGG - chr4.2:71441360-71441379 MS.gene043168:intron 15.0%
!! CACATAATTCAATATAAATT+AGG - chr4.2:71437189-71437208 MS.gene043168:CDS 15.0%
!! CTATAATAATGTTATATTGT+TGG + chr4.2:71438405-71438424 None:intergenic 15.0%
!! TTAATTAATAGTGACAATAA+AGG - chr4.2:71437082-71437101 MS.gene043168:CDS 15.0%
!! TTATAGGAAAATATGTTTAA+GGG - chr4.2:71438419-71438438 MS.gene043168:CDS 15.0%
!! TTCACATACATTAAAAAAAA+GGG - chr4.2:71441395-71441414 MS.gene043168:intron 15.0%
!! TTTCACATACATTAAAAAAA+AGG - chr4.2:71441394-71441413 MS.gene043168:intron 15.0%
!!! ATATCATATTTTGGAATTAA+GGG - chr4.2:71437860-71437879 MS.gene043168:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr4.2:71439854-71439873 None:intergenic 15.0%
!!! GTCACTTATTTTAAAATAAA+AGG - chr4.2:71440148-71440167 MS.gene043168:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr4.2:71439957-71439976 None:intergenic 15.0%
!!! TTTTGGTTTTTTTAATTGTT+GGG - chr4.2:71437652-71437671 MS.gene043168:CDS 15.0%
!!! TTTTGTTTATATTTCATATC+GGG + chr4.2:71438522-71438541 None:intergenic 15.0%
!!! TTTTTGCAACAAATAATTTA+AGG + chr4.2:71439128-71439147 None:intergenic 15.0%
!! AAACTAACCAATAGTTAATA+AGG - chr4.2:71439971-71439990 MS.gene043168:intron 20.0%
!! AATTCTCATCACAATTTAAA+AGG + chr4.2:71437793-71437812 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr4.2:71439894-71439913 None:intergenic 20.0%
!! ATATTCAAGATAACTATAGT+TGG - chr4.2:71441740-71441759 MS.gene043168:intron 20.0%
!! CAAAAAAAAAACAATGTAGA+TGG + chr4.2:71440274-71440293 None:intergenic 20.0%
!! GAAATATAAACGTAAAAAGT+AGG + chr4.2:71438621-71438640 None:intergenic 20.0%
!! GAATATTGTATATTATATGC+AGG + chr4.2:71439056-71439075 None:intergenic 20.0%
!! GAGTATTAATTAAAGACAAA+TGG + chr4.2:71439802-71439821 None:intergenic 20.0%
!! GTAAATGCAAGTAAAAAAAA+AGG - chr4.2:71439200-71439219 MS.gene043168:intron 20.0%
!! TAACAAAATTTAGTTGAGTT+GGG + chr4.2:71437381-71437400 None:intergenic 20.0%
!! TCAATACAAAATGATAACTA+TGG + chr4.2:71438329-71438348 None:intergenic 20.0%
!! TCTTACATTTATAATCACAA+AGG - chr4.2:71443038-71443057 MS.gene043168:CDS 20.0%
!! TGCATTTACAAAACAAAATT+AGG + chr4.2:71439189-71439208 None:intergenic 20.0%
!! TTCAAAATTGTAGTATTCAA+AGG - chr4.2:71439272-71439291 MS.gene043168:intron 20.0%
!! TTGGCTTAATATAATTTACA+GGG - chr4.2:71441460-71441479 MS.gene043168:intron 20.0%
!! TTTACGTTTATATTTCATTC+CGG - chr4.2:71438625-71438644 MS.gene043168:intron 20.0%
!! TTTGTTTATATTTCATATCG+GGG + chr4.2:71438521-71438540 None:intergenic 20.0%
!!! AATTATGTGATTTTCTCAAA+CGG + chr4.2:71437178-71437197 None:intergenic 20.0%
!!! ACATAGTATTTTAATGTGAA+AGG + chr4.2:71439253-71439272 None:intergenic 20.0%
!!! AGGTTAATTAGTTTGTTATT+TGG + chr4.2:71440434-71440453 None:intergenic 20.0%
!!! ATATAAGTTTTGAAGAGTTT+TGG - chr4.2:71437635-71437654 MS.gene043168:CDS 20.0%
!!! ATGATATAAAATTGATTTGG+TGG + chr4.2:71437441-71437460 None:intergenic 20.0%
!!! ATTGGCTTAATATAATTTAC+AGG - chr4.2:71441459-71441478 MS.gene043168:intron 20.0%
!!! GATATCATATTTTGGAATTA+AGG - chr4.2:71437859-71437878 MS.gene043168:intron 20.0%
!!! GTTTTGGTTTTTTTAATTGT+TGG - chr4.2:71437651-71437670 MS.gene043168:CDS 20.0%
!!! TCTTTGATAGAATATTTTAG+TGG - chr4.2:71442894-71442913 MS.gene043168:intron 20.0%
!!! TGAATTAGTCCATTTTAATA+TGG - chr4.2:71437472-71437491 MS.gene043168:CDS 20.0%
!!! TTTGATTGTATTTTCAACAA+GGG - chr4.2:71442231-71442250 MS.gene043168:intron 20.0%
!!! TTTTGAAAAGTATTTCAAAC+AGG + chr4.2:71437558-71437577 None:intergenic 20.0%
!!! TTTTTACTTATAACAGTCAT+CGG + chr4.2:71440200-71440219 None:intergenic 20.0%
! AAAATTGTAGTATTCAAAGG+AGG - chr4.2:71439275-71439294 MS.gene043168:intron 25.0%
! AACTTGATATCATATCTAAC+AGG - chr4.2:71437884-71437903 MS.gene043168:intron 25.0%
! AATTGTGATGAGAATTGAAA+TGG - chr4.2:71437797-71437816 MS.gene043168:intron 25.0%
! ACAAAGAAAATAGCATGTTT+CGG + chr4.2:71438471-71438490 None:intergenic 25.0%
! ACATTCTGTTTATTTCCATT+TGG + chr4.2:71442186-71442205 None:intergenic 25.0%
! AGTATGATATATCAATCAAG+TGG - chr4.2:71441334-71441353 MS.gene043168:intron 25.0%
! CATTAAATGAGTGATGTATA+TGG - chr4.2:71441242-71441261 MS.gene043168:intron 25.0%
! CATTCTGTTTATTTCCATTT+GGG + chr4.2:71442185-71442204 None:intergenic 25.0%
! GACATATAGGTTTAACATTA+AGG - chr4.2:71441831-71441850 MS.gene043168:intron 25.0%
! GACATTGCATAATATATGTT+GGG + chr4.2:71440368-71440387 None:intergenic 25.0%
! GGATTATGAATGTTATGTTT+AGG - chr4.2:71437818-71437837 MS.gene043168:intron 25.0%
! GTAACAAAATTTAGTTGAGT+TGG + chr4.2:71437382-71437401 None:intergenic 25.0%
! GTTAGGATATGTAGAATAAA+GGG + chr4.2:71441150-71441169 None:intergenic 25.0%
! TAATATAATTTACAGGGACT+AGG - chr4.2:71441466-71441485 MS.gene043168:intron 25.0%
! TCGATAATTTATACTTCTTC+CGG + chr4.2:71438647-71438666 None:intergenic 25.0%
! TCTTGAATATAAGTCAAGAT+CGG + chr4.2:71441730-71441749 None:intergenic 25.0%
! TGTTAGGATATGTAGAATAA+AGG + chr4.2:71441151-71441170 None:intergenic 25.0%
! TTAATAGTGACAATAAAGGT+TGG - chr4.2:71437086-71437105 MS.gene043168:CDS 25.0%
! TTGTTTATATTTCATATCGG+GGG + chr4.2:71438520-71438539 None:intergenic 25.0%
!! ATCATAATCTGGTGAATTTT+AGG - chr4.2:71440935-71440954 MS.gene043168:intron 25.0%
!! ATTCCTCAATATTTTCTGTT+TGG - chr4.2:71442735-71442754 MS.gene043168:intron 25.0%
!! CAATTTTATATCATCTTCTG+CGG - chr4.2:71437447-71437466 MS.gene043168:CDS 25.0%
!! CTTTGATTGTATTTTCAACA+AGG - chr4.2:71442230-71442249 MS.gene043168:intron 25.0%
!! GTGTCTTTAAAAAATATCAC+TGG - chr4.2:71438930-71438949 MS.gene043168:intron 25.0%
!! TAGAGAATTTGATTTAAGTG+AGG + chr4.2:71440454-71440473 None:intergenic 25.0%
!! TAGTCTTTTAATCTCAACAA+AGG + chr4.2:71442646-71442665 None:intergenic 25.0%
!! TCATAATCTGGTGAATTTTA+GGG - chr4.2:71440936-71440955 MS.gene043168:intron 25.0%
!! TGAATTGTTCAGATTTTTGA+CGG + chr4.2:71441966-71441985 None:intergenic 25.0%
!! TGGCTAAAATTCACATTTTA+AGG - chr4.2:71440307-71440326 MS.gene043168:intron 25.0%
!!! CACATCTTGATTACTTTTAT+TGG - chr4.2:71442961-71442980 MS.gene043168:CDS 25.0%
!!! GAATATTTTAGTGGTAAAGA+TGG - chr4.2:71442903-71442922 MS.gene043168:intron 25.0%
!!! TAATTGGTGGTATTTTACTA+TGG - chr4.2:71441681-71441700 MS.gene043168:intron 25.0%
!!! TATTTTAATGTGAAAGGTCT+AGG + chr4.2:71439247-71439266 None:intergenic 25.0%
!!! TTTGTTATTTGGATTTGTCA+AGG + chr4.2:71440423-71440442 None:intergenic 25.0%
!!! TTTTTGTTTATAACAGTGAC+CGG - chr4.2:71441307-71441326 MS.gene043168:intron 25.0%
AAATACATCAATGTCCCAAA+TGG - chr4.2:71442168-71442187 MS.gene043168:intron 30.0%
ACTCCAAACAGAAAATATTG+AGG + chr4.2:71442741-71442760 None:intergenic 30.0%
AGCTAATAACAATGACAAGA+GGG + chr4.2:71441203-71441222 None:intergenic 30.0%
AGTTGAAAAGTCAATGTACA+TGG - chr4.2:71438563-71438582 MS.gene043168:intron 30.0%
ATAATGAAAGATCGTGTGTT+AGG + chr4.2:71441167-71441186 None:intergenic 30.0%
ATCACATTGCTTCAAAGAAT+TGG - chr4.2:71442579-71442598 MS.gene043168:intron 30.0%
ATCATGACAATTGTACATGT+TGG - chr4.2:71440821-71440840 MS.gene043168:intron 30.0%
ATGAATGTTATGTTTAGGTG+TGG - chr4.2:71437823-71437842 MS.gene043168:intron 30.0%
CAAATGGTCAAGTATATCAA+AGG + chr4.2:71439786-71439805 None:intergenic 30.0%
CATAATATATGTTGGGATCA+GGG + chr4.2:71440361-71440380 None:intergenic 30.0%
CATGTACAATTGTCATGATA+AGG + chr4.2:71440820-71440839 None:intergenic 30.0%
CTAGAAGCTCATTCTTTAAT+TGG - chr4.2:71441665-71441684 MS.gene043168:intron 30.0%
CTATTTGATGAAATTCACGT+GGG - chr4.2:71439351-71439370 MS.gene043168:intron 30.0%
CTTTGAATGCAAGAAATGTT+AGG + chr4.2:71439697-71439716 None:intergenic 30.0%
GATAACTATAGTTGGATTCT+TGG - chr4.2:71441748-71441767 MS.gene043168:intron 30.0%
GATATATAATCGTTTAGCAG+CGG + chr4.2:71437290-71437309 None:intergenic 30.0%
GCTCTTTGAACTTTGATATT+TGG - chr4.2:71437331-71437350 MS.gene043168:CDS 30.0%
GGACATTGCATAATATATGT+TGG + chr4.2:71440369-71440388 None:intergenic 30.0%
GTATATTATATGCAGGAGTT+GGG + chr4.2:71439049-71439068 None:intergenic 30.0%
GTTCTGTGACAATATCAATA+AGG - chr4.2:71442938-71442957 MS.gene043168:intron 30.0%
TAGCTAATAACAATGACAAG+AGG + chr4.2:71441204-71441223 None:intergenic 30.0%
TATAGTTGGATTCTTGGATT+TGG - chr4.2:71441754-71441773 MS.gene043168:intron 30.0%
TATATTATATGCAGGAGTTG+GGG + chr4.2:71439048-71439067 None:intergenic 30.0%
TATCACATGGTTAATAGACT+CGG - chr4.2:71440975-71440994 MS.gene043168:intron 30.0%
TCTATTTGATGAAATTCACG+TGG - chr4.2:71439350-71439369 MS.gene043168:intron 30.0%
TCTCTTATCTACATATTGGT+AGG - chr4.2:71438040-71438059 MS.gene043168:CDS 30.0%
TGCTTCTCTTATCTACATAT+TGG - chr4.2:71438036-71438055 MS.gene043168:CDS 30.0%
TGTATATTATATGCAGGAGT+TGG + chr4.2:71439050-71439069 None:intergenic 30.0%
! AAGAGTCCTTTTCTTAGAAT+CGG - chr4.2:71441862-71441881 MS.gene043168:intron 30.0%
! GAAACAGGTAAATTGTGTTT+TGG - chr4.2:71437687-71437706 MS.gene043168:CDS 30.0%
! GACAATCAATTTTCTTGTTC+CGG + chr4.2:71441040-71441059 None:intergenic 30.0%
! TAAGTTTACCTCAGTTGATA+AGG + chr4.2:71440390-71440409 None:intergenic 30.0%
! TATTTGAGTATTGTTGGTGT+TGG - chr4.2:71442846-71442865 MS.gene043168:intron 30.0%
! TGGGTATCAAACTTTGAAAA+TGG - chr4.2:71439588-71439607 MS.gene043168:intron 30.0%
! TTTAAGGCAATGATAACAAG+TGG + chr4.2:71439112-71439131 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr4.2:71440063-71440082 MS.gene043168:intron 30.0%
!! AGAACTCACACATTTTAATG+TGG - chr4.2:71438997-71439016 MS.gene043168:intron 30.0%
!!! AGTTTCTGAGGTTTTTACTA+TGG - chr4.2:71442758-71442777 MS.gene043168:intron 30.0%
!!! GTGAACAAGTGAGTTTTTTA+GGG - chr4.2:71440329-71440348 MS.gene043168:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr4.2:71440062-71440081 None:intergenic 30.0%
!!! TTCATTGCTGATTCTTTTCT+TGG - chr4.2:71437992-71438011 MS.gene043168:intron 30.0%
!!! TTTTTTGTCAAGTAGTCTAG+TGG - chr4.2:71440287-71440306 MS.gene043168:intron 30.0%
AAAGAAAACAATGGCGACAT+TGG + chr4.2:71442496-71442515 None:intergenic 35.0%
AAGAATGTCAATGTTTGGTC+TGG - chr4.2:71437938-71437957 MS.gene043168:intron 35.0%
AATGTGAGATCTTGTGTTGA+GGG + chr4.2:71441122-71441141 None:intergenic 35.0%
AATTCACCAGATTATGATGC+AGG + chr4.2:71440933-71440952 None:intergenic 35.0%
AGATCTCCAATAACCAGATT+TGG + chr4.2:71437021-71437040 None:intergenic 35.0%
AGATCTGCTTGGTTTATCAT+AGG - chr4.2:71437035-71437054 MS.gene043168:CDS 35.0%
ATAAAGTCGTTAGACGTACA+TGG - chr4.2:71439618-71439637 MS.gene043168:intron 35.0%
ATAACCAGATTTGGACCTAA+CGG + chr4.2:71437012-71437031 None:intergenic 35.0%
ATACCTATGAAGCACAAACA+CGG - chr4.2:71437128-71437147 MS.gene043168:CDS 35.0%
ATCACATGGTTAATAGACTC+GGG - chr4.2:71440976-71440995 MS.gene043168:intron 35.0%
ATGCAGAAAACAATAGTTCC+TGG - chr4.2:71442435-71442454 MS.gene043168:intron 35.0%
ATGGCATTGCTAAAACCAAA+GGG - chr4.2:71442267-71442286 MS.gene043168:intron 35.0%
ATTGGTTATCGTTTGAAGAG+AGG + chr4.2:71442478-71442497 None:intergenic 35.0%
CATCAAAACATGAGCCAATA+TGG + chr4.2:71441433-71441452 None:intergenic 35.0%
CCATGCTTCTTAGTTCATTT+GGG + chr4.2:71442815-71442834 None:intergenic 35.0%
CCTAAACCCTATATATACCT+AGG + chr4.2:71440779-71440798 None:intergenic 35.0%
CCTAGGTATATATAGGGTTT+AGG - chr4.2:71440776-71440795 MS.gene043168:intron 35.0%
CTAAAAATAGCACAAGAGCA+TGG - chr4.2:71442663-71442682 MS.gene043168:intron 35.0%
CTAAGGCCTAGGTATATATA+GGG - chr4.2:71440770-71440789 MS.gene043168:intron 35.0%
CTGAGATGATAACTTTAGTG+AGG - chr4.2:71440614-71440633 MS.gene043168:intron 35.0%
CTGCTAAGAATGTCAATGTT+TGG - chr4.2:71437933-71437952 MS.gene043168:intron 35.0%
GAAGCTCATTCTTTAATTGG+TGG - chr4.2:71441668-71441687 MS.gene043168:intron 35.0%
GACAATTGTACATGTTGGTA+CGG - chr4.2:71440826-71440845 MS.gene043168:intron 35.0%
GAGGGAGTAGTAGAAAAATA+TGG - chr4.2:71440085-71440104 MS.gene043168:intron 35.0%
GATGATAACTTTAGTGAGGT+TGG - chr4.2:71440618-71440637 MS.gene043168:intron 35.0%
GCATAATATATGTTGGGATC+AGG + chr4.2:71440362-71440381 None:intergenic 35.0%
GGGAACTAAAAAACTGAAAC+AGG - chr4.2:71437672-71437691 MS.gene043168:CDS 35.0%
GTAAAGATGGTCATGAAAGT+TGG - chr4.2:71442916-71442935 MS.gene043168:intron 35.0%
GTATGACTCAGATGAAACTT+TGG - chr4.2:71437353-71437372 MS.gene043168:CDS 35.0%
TAATGTGAGATCTTGTGTTG+AGG + chr4.2:71441123-71441142 None:intergenic 35.0%
TACGTCTAACGACTTTATGT+GGG + chr4.2:71439616-71439635 None:intergenic 35.0%
TACTTATAACAGTCATCGGA+GGG + chr4.2:71440196-71440215 None:intergenic 35.0%
TATAGGGTTTAGGTACAACT+TGG - chr4.2:71440786-71440805 MS.gene043168:intron 35.0%
TTACTTATAACAGTCATCGG+AGG + chr4.2:71440197-71440216 None:intergenic 35.0%
TTAGGTCCAAATCTGGTTAT+TGG - chr4.2:71437012-71437031 MS.gene043168:CDS 35.0%
TTCAATATCCGCTGTTGATA+AGG + chr4.2:71441926-71441945 None:intergenic 35.0%
TTGATATATCATACTGCCTC+CGG + chr4.2:71441329-71441348 None:intergenic 35.0%
! AAACCTTGTGTTCAAGCTTT+TGG - chr4.2:71441601-71441620 MS.gene043168:intron 35.0%
! AACCTTGTGTTCAAGCTTTT+GGG - chr4.2:71441602-71441621 MS.gene043168:intron 35.0%
! ACTAAGGTTGGTTCCAATTT+GGG - chr4.2:71442344-71442363 MS.gene043168:intron 35.0%
! ATTATTCGGTTTGACCTAAG+AGG - chr4.2:71440509-71440528 MS.gene043168:intron 35.0%
! ATTGTATTTTCAACAAGGGC+AGG - chr4.2:71442235-71442254 MS.gene043168:intron 35.0%
! CCAAATGAACTAAGAAGCAT+GGG - chr4.2:71442813-71442832 MS.gene043168:intron 35.0%
! GCACTCTATTTGAGTATTGT+TGG - chr4.2:71442840-71442859 MS.gene043168:intron 35.0%
! GCAGAGAGGATATCATATTT+TGG - chr4.2:71437851-71437870 MS.gene043168:intron 35.0%
! GCTTTGATTGTTTTCTTGCT+TGG - chr4.2:71441802-71441821 MS.gene043168:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr4.2:71439932-71439951 None:intergenic 35.0%
! GTGATTTTCTCAAACGGTAT+CGG + chr4.2:71437172-71437191 None:intergenic 35.0%
! TACTAAGGTTGGTTCCAATT+TGG - chr4.2:71442343-71442362 MS.gene043168:intron 35.0%
! TCGACAATGTCACCTATTTT+GGG + chr4.2:71439732-71439751 None:intergenic 35.0%
! TGGTATTTTACTATGGTTGC+AGG - chr4.2:71441688-71441707 MS.gene043168:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr4.2:71439928-71439947 None:intergenic 35.0%
! TTGTTTTCTTGCTTGGAACA+AGG - chr4.2:71441809-71441828 MS.gene043168:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr4.2:71439828-71439847 None:intergenic 35.0%
!! ACTAGAGAGTGTTAGAAAGA+AGG + chr4.2:71439314-71439333 None:intergenic 35.0%
!! CACATTTTAATGTGGAGAAG+TGG - chr4.2:71439005-71439024 MS.gene043168:intron 35.0%
!! TACTTTTATTGGCTACTTGC+TGG - chr4.2:71442972-71442991 MS.gene043168:CDS 35.0%
!! TCTGAGGTTTTTACTATGGT+TGG - chr4.2:71442762-71442781 MS.gene043168:intron 35.0%
!! TTTTCTGTTTGGAGTTTCTG+AGG - chr4.2:71442746-71442765 MS.gene043168:intron 35.0%
!!! ATTGGCTCATGTTTTGATGT+TGG - chr4.2:71441434-71441453 MS.gene043168:intron 35.0%
!!! CATGTTTTGATGTTGGTCAT+TGG - chr4.2:71441441-71441460 MS.gene043168:intron 35.0%
!!! GGTGAACAAGTGAGTTTTTT+AGG - chr4.2:71440328-71440347 MS.gene043168:intron 35.0%
!!! TTTTACTATGGTTGGTCTTC+AGG - chr4.2:71442770-71442789 MS.gene043168:intron 35.0%
AAGAAGCAAAGGCAGTACTA+AGG - chr4.2:71442328-71442347 MS.gene043168:intron 40.0%
AAGTAAGTGAGAGGTTCATG+AGG - chr4.2:71440702-71440721 MS.gene043168:intron 40.0%
ACAAATATCCGGTCGTAGAT+GGG + chr4.2:71442522-71442541 None:intergenic 40.0%
ACACTGGAAAGTGGACAATA+TGG - chr4.2:71437531-71437550 MS.gene043168:CDS 40.0%
ACCAAAGTTGTAGCCCAAAT+TGG + chr4.2:71442360-71442379 None:intergenic 40.0%
ACTACAAGTCTCGTCTTCTT+TGG + chr4.2:71442295-71442314 None:intergenic 40.0%
AGCATCTAACAACACTTCGT+TGG + chr4.2:71436943-71436962 None:intergenic 40.0%
ATATAATCGTTTAGCAGCGG+CGG + chr4.2:71437287-71437306 None:intergenic 40.0%
ATCAACAGCGGATATTGAAG+AGG - chr4.2:71441927-71441946 MS.gene043168:intron 40.0%
ATCAACCACCATATACGCAT+TGG + chr4.2:71442717-71442736 None:intergenic 40.0%
ATTAGGACACGCTTTATCTG+AGG - chr4.2:71437206-71437225 MS.gene043168:CDS 40.0%
ATTATCACTGGAAAACCCTC+AGG - chr4.2:71442555-71442574 MS.gene043168:intron 40.0%
ATTCGACGAAAAATATCCCG+AGG - chr4.2:71441633-71441652 MS.gene043168:intron 40.0%
CAACTGTTCCAATGCGTATA+TGG - chr4.2:71442706-71442725 MS.gene043168:intron 40.0%
CACTGGAAAGTGGACAATAT+GGG - chr4.2:71437532-71437551 MS.gene043168:CDS 40.0%
CATGAACCTCTCACTTACTT+GGG + chr4.2:71440702-71440721 None:intergenic 40.0%
CATGGCATTGCTAAAACCAA+AGG - chr4.2:71442266-71442285 MS.gene043168:intron 40.0%
CCACTAGCAAGAATTATCAC+TGG - chr4.2:71442543-71442562 MS.gene043168:intron 40.0%
CCAGTGATAATTCTTGCTAG+TGG + chr4.2:71442546-71442565 None:intergenic 40.0%
CCCAAATGAACTAAGAAGCA+TGG - chr4.2:71442812-71442831 MS.gene043168:intron 40.0%
CCCATGCTTCTTAGTTCATT+TGG + chr4.2:71442816-71442835 None:intergenic 40.0%
CTACATTCTTCACCAAGCAA+GGG - chr4.2:71442406-71442425 MS.gene043168:intron 40.0%
CTTGCTGGATTAAGTGTCAT+GGG - chr4.2:71442987-71443006 MS.gene043168:CDS 40.0%
GAGAAGCAAGTATGATTGTG+CGG + chr4.2:71438024-71438043 None:intergenic 40.0%
GATGGGGCTAAAGAAAACAA+TGG + chr4.2:71442505-71442524 None:intergenic 40.0%
GCAAACGACGAATAGATCAA+CGG + chr4.2:71440575-71440594 None:intergenic 40.0%
GCTAAGGCCTAGGTATATAT+AGG - chr4.2:71440769-71440788 MS.gene043168:intron 40.0%
GGATAGACAGATAGCCATAT+TGG - chr4.2:71441416-71441435 MS.gene043168:intron 40.0%
GTACGTCTAACGACTTTATG+TGG + chr4.2:71439617-71439636 None:intergenic 40.0%
GTAGAACAAGATGTGAGTGA+AGG + chr4.2:71441517-71441536 None:intergenic 40.0%
GTTATGTTTAGGTGTGGAAG+TGG - chr4.2:71437829-71437848 MS.gene043168:intron 40.0%
TATCTAGTTGCCATTGGACA+AGG - chr4.2:71441571-71441590 MS.gene043168:intron 40.0%
TCACTCTATCTAGTTGCCAT+TGG - chr4.2:71441565-71441584 MS.gene043168:intron 40.0%
TCATGAACCTCTCACTTACT+TGG + chr4.2:71440703-71440722 None:intergenic 40.0%
TCCAATTTGGGCTACAACTT+TGG - chr4.2:71442356-71442375 MS.gene043168:intron 40.0%
TCGTTGCAGCTGTAAGAAAT+TGG - chr4.2:71441893-71441912 MS.gene043168:intron 40.0%
TCTACATTCTTCACCAAGCA+AGG - chr4.2:71442405-71442424 MS.gene043168:intron 40.0%
TGCAATGTCCTTATCAACTG+AGG - chr4.2:71440379-71440398 MS.gene043168:intron 40.0%
TGCTTGGAACAAGGACATAT+AGG - chr4.2:71441818-71441837 MS.gene043168:intron 40.0%
TTACAGCTGCAACGAATACA+CGG + chr4.2:71441888-71441907 None:intergenic 40.0%
TTGCTAGTGGCACAAATATC+CGG + chr4.2:71442533-71442552 None:intergenic 40.0%
TTGCTGGATTAAGTGTCATG+GGG - chr4.2:71442988-71443007 MS.gene043168:CDS 40.0%
TTGCTTCAAAGAATTGGCAC+TGG - chr4.2:71442585-71442604 MS.gene043168:intron 40.0%
TTGTTTATAACAGTGACCGG+AGG - chr4.2:71441310-71441329 MS.gene043168:intron 40.0%
TTTATGTCCACCTTGTCCAA+TGG + chr4.2:71441584-71441603 None:intergenic 40.0%
! ACCTTGTGTTCAAGCTTTTG+GGG - chr4.2:71441603-71441622 MS.gene043168:intron 40.0%
! ACTTGCTGGATTAAGTGTCA+TGG - chr4.2:71442986-71443005 MS.gene043168:CDS 40.0%
! GTCGACAATGTCACCTATTT+TGG + chr4.2:71439733-71439752 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr4.2:71439929-71439948 None:intergenic 40.0%
! TGGGCTACAACTTTGGTTTA+TGG - chr4.2:71442363-71442382 MS.gene043168:intron 40.0%
!! CAATGTCACCTATTTTGGGA+CGG + chr4.2:71439728-71439747 None:intergenic 40.0%
!! GATTCTAGTTCCTAACACAC+TGG - chr4.2:71437515-71437534 MS.gene043168:CDS 40.0%
!! GTTTTAGCAATGCCATGTTG+AGG + chr4.2:71442263-71442282 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4.2:71440067-71440086 MS.gene043168:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4.2:71440086-71440067 None:intergenic 40.0%
AAGAGGATGGTTGAGCTACT+TGG - chr4.2:71440526-71440545 MS.gene043168:intron 45.0%
ACAGCGGATATTGAAGAGGA+TGG - chr4.2:71441931-71441950 MS.gene043168:intron 45.0%
AGCAAAGGCAGTACTAAGGT+TGG - chr4.2:71442332-71442351 MS.gene043168:intron 45.0%
AGTAGCTCAACCATCCTCTT+AGG + chr4.2:71440526-71440545 None:intergenic 45.0%
ATACCACTCCGTCCCAAAAT+AGG - chr4.2:71439717-71439736 MS.gene043168:intron 45.0%
CAAATATCCGGTCGTAGATG+GGG + chr4.2:71442521-71442540 None:intergenic 45.0%
CAACCGTGTTTGTGCTTCAT+AGG + chr4.2:71437134-71437153 None:intergenic 45.0%
CACAAATATCCGGTCGTAGA+TGG + chr4.2:71442523-71442542 None:intergenic 45.0%
CAGTGAGATCGAAGAAGCAA+AGG - chr4.2:71442317-71442336 MS.gene043168:intron 45.0%
CATGGTTAATAGACTCGGGT+CGG - chr4.2:71440980-71440999 MS.gene043168:intron 45.0%
CGCATTGGAACAGTTGCATT+TGG + chr4.2:71442702-71442721 None:intergenic 45.0%
CTGGTTATTGGAGATCTGCT+TGG - chr4.2:71437024-71437043 MS.gene043168:CDS 45.0%
CTGTTCCAATGCGTATATGG+TGG - chr4.2:71442709-71442728 MS.gene043168:intron 45.0%
GAGGAGAGGTCACAAGTTTA+GGG - chr4.2:71440721-71440740 MS.gene043168:intron 45.0%
GCGAAACACCTTATCAACAG+CGG - chr4.2:71441915-71441934 MS.gene043168:intron 45.0%
GCTTCTCTACTTCCTCTGTT+AGG - chr4.2:71437965-71437984 MS.gene043168:intron 45.0%
GTACATGTTGGTACGGATGT+GGG - chr4.2:71440833-71440852 MS.gene043168:intron 45.0%
GTTATCGTTTGAAGAGAGGC+AGG + chr4.2:71442474-71442493 None:intergenic 45.0%
GTTCCTAACACACTGGAAAG+TGG - chr4.2:71437522-71437541 MS.gene043168:CDS 45.0%
TACCAACTGAGCTAAGCTCA+CGG - chr4.2:71439077-71439096 MS.gene043168:intron 45.0%
TATTCGTCGTTTGCCTGGTT+CGG - chr4.2:71440581-71440600 MS.gene043168:intron 45.0%
TCATACCTGACCTAAGGCTA+AGG - chr4.2:71440753-71440772 MS.gene043168:intron 45.0%
TCGTCTTCTTTGGATCCCTT+TGG + chr4.2:71442285-71442304 None:intergenic 45.0%
TGAAGCAATGTGATGCCTGA+GGG + chr4.2:71442573-71442592 None:intergenic 45.0%
TGAAGCACAAACACGGTTGT+TGG - chr4.2:71437135-71437154 MS.gene043168:CDS 45.0%
TGAGGAGAGGTCACAAGTTT+AGG - chr4.2:71440720-71440739 MS.gene043168:intron 45.0%
TGATCTATTCGTCGTTTGCC+TGG - chr4.2:71440576-71440595 MS.gene043168:intron 45.0%
TGTACATGTTGGTACGGATG+TGG - chr4.2:71440832-71440851 MS.gene043168:intron 45.0%
TGTCCACTTTCCAGTGTGTT+AGG + chr4.2:71437528-71437547 None:intergenic 45.0%
TTGAAGCAATGTGATGCCTG+AGG + chr4.2:71442574-71442593 None:intergenic 45.0%
! ACACGGCCGATTCTAAGAAA+AGG + chr4.2:71441871-71441890 None:intergenic 45.0%
! ATGTGTGAGTTCTAGCCACT+AGG + chr4.2:71438990-71439009 None:intergenic 45.0%
! CTTCTAGCTATATGCTCCTC+GGG + chr4.2:71441652-71441671 None:intergenic 45.0%
! GAAGTGTCATACCTGACCTA+AGG - chr4.2:71440747-71440766 MS.gene043168:intron 45.0%
! GCTCAGTTAGCTCTTGTTGA+TGG - chr4.2:71436960-71436979 MS.gene043168:CDS 45.0%
! GCTTCTAGCTATATGCTCCT+CGG + chr4.2:71441653-71441672 None:intergenic 45.0%
! GGTGTTGGAAGCTTTCTAAG+TGG - chr4.2:71442861-71442880 MS.gene043168:intron 45.0%
! TATACCTAGGCCTTAGCCTT+AGG + chr4.2:71440766-71440785 None:intergenic 45.0%
! TTCGGTTTGACCTAAGAGGA+TGG - chr4.2:71440513-71440532 MS.gene043168:intron 45.0%
! TTTGAGGTCAAGTAGCCTAG+TGG - chr4.2:71438972-71438991 MS.gene043168:intron 45.0%
!! AACGGATTAACCCCAACAGA+CGG + chr4.2:71440557-71440576 None:intergenic 45.0%
!! GCAATGAAAGCACCTAACAG+AGG + chr4.2:71437980-71437999 None:intergenic 45.0%
!! GTTGCAGTGCTTTGTTTGAG+TGG + chr4.2:71437911-71437930 None:intergenic 45.0%
!! TTGTGTTCAAGCTTTTGGGG+CGG - chr4.2:71441606-71441625 MS.gene043168:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4.2:71440066-71440085 MS.gene043168:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4.2:71440085-71440066 None:intergenic 45.0%
!!! TAAATAAAGATTTATTTTTT+TGG - chr4.2:71438695-71438714 MS.gene043168:intron 5.0%
AACCCCCTTTGTCTCTACCA+GGG + chr4.2:71440656-71440675 None:intergenic 50.0%
AGGAGTTGGGGTTTGAATCC+CGG + chr4.2:71439036-71439055 None:intergenic 50.0%
AGTCCCTGGTAGAGACAAAG+GGG - chr4.2:71440650-71440669 MS.gene043168:intron 50.0%
AGTGAGAGGTTCATGAGGAG+AGG - chr4.2:71440707-71440726 MS.gene043168:intron 50.0%
ATCGTTTGAAGAGAGGCAGG+AGG + chr4.2:71442471-71442490 None:intergenic 50.0%
ATGTGGGTAACCCTTAGTCC+TGG - chr4.2:71440849-71440868 MS.gene043168:intron 50.0%
CAGATTATGATGCAGGCCGA+GGG + chr4.2:71440926-71440945 None:intergenic 50.0%
CAGTCCCTGGTAGAGACAAA+GGG - chr4.2:71440649-71440668 MS.gene043168:intron 50.0%
CTAGTTGCCATTGGACAAGG+TGG - chr4.2:71441574-71441593 MS.gene043168:intron 50.0%
CTGCATAGAACTCCCTTGCT+TGG + chr4.2:71442421-71442440 None:intergenic 50.0%
GACACGCTTTATCTGAGGAG+TGG - chr4.2:71437211-71437230 MS.gene043168:CDS 50.0%
GATCTGAGCGGAATCGGATT+GGG - chr4.2:71441002-71441021 MS.gene043168:intron 50.0%
GCCCCAAAAGCTTGAACACA+AGG + chr4.2:71441607-71441626 None:intergenic 50.0%
GCTCGTCGTATGGTATCACA+TGG - chr4.2:71440962-71440981 MS.gene043168:intron 50.0%
GGGTTTAGGTACAACTTGGC+TGG - chr4.2:71440790-71440809 MS.gene043168:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr4.2:71439078-71439097 None:intergenic 50.0%
TACTATGGTTGCAGGTGCCA+CGG - chr4.2:71441696-71441715 MS.gene043168:intron 50.0%
TCAGTCCCTGGTAGAGACAA+AGG - chr4.2:71440648-71440667 MS.gene043168:intron 50.0%
TCTTGTTCCGGACTGAGCTA+AGG + chr4.2:71441028-71441047 None:intergenic 50.0%
TCTTTAGCCCCATCTACGAC+CGG - chr4.2:71442511-71442530 MS.gene043168:intron 50.0%
TGTGGGTAACCCTTAGTCCT+GGG - chr4.2:71440850-71440869 MS.gene043168:intron 50.0%
! ATGTGGAGAAGTGGAGTGTC+CGG - chr4.2:71439014-71439033 MS.gene043168:intron 50.0%
! GATGGAGTCGTTGACTACAG+AGG - chr4.2:71436978-71436997 MS.gene043168:CDS 50.0%
! TTTAGGGTGTGCTCGTCGTA+TGG - chr4.2:71440952-71440971 MS.gene043168:intron 50.0%
!! ACTTGGTTCTGCCGTCTGTT+GGG - chr4.2:71440543-71440562 MS.gene043168:intron 50.0%
!! TACTTGGTTCTGCCGTCTGT+TGG - chr4.2:71440542-71440561 MS.gene043168:intron 50.0%
!!! TCACCTATTTTGGGACGGAG+TGG + chr4.2:71439723-71439742 None:intergenic 50.0%
AAGGTAGCTCCCCAGGACTA+AGG + chr4.2:71440863-71440882 None:intergenic 55.0%
ACAGAGGACAACCTGCCGTT+AGG - chr4.2:71436994-71437013 MS.gene043168:CDS 55.0%
AGGTAGCTCCCCAGGACTAA+GGG + chr4.2:71440862-71440881 None:intergenic 55.0%
CAACCCCCTTTGTCTCTACC+AGG + chr4.2:71440657-71440676 None:intergenic 55.0%
CAAGGGCAGGTTCCTCAACA+TGG - chr4.2:71442248-71442267 MS.gene043168:intron 55.0%
CAGCACTGTTCAACCGAACC+AGG + chr4.2:71440597-71440616 None:intergenic 55.0%
CCAGATTATGATGCAGGCCG+AGG + chr4.2:71440927-71440946 None:intergenic 55.0%
CCAGATTTGGACCTAACGGC+AGG + chr4.2:71437008-71437027 None:intergenic 55.0%
CCTCGGCCTGCATCATAATC+TGG - chr4.2:71440924-71440943 MS.gene043168:intron 55.0%
CCTCTCACTTACTTGGGCGT+CGG + chr4.2:71440696-71440715 None:intergenic 55.0%
CCTGCCGTTAGGTCCAAATC+TGG - chr4.2:71437005-71437024 MS.gene043168:CDS 55.0%
CTGACCTAAGGCTAAGGCCT+AGG - chr4.2:71440759-71440778 MS.gene043168:intron 55.0%
GATTGGGCCTTAGCTCAGTC+CGG - chr4.2:71441018-71441037 MS.gene043168:intron 55.0%
GGATCTGAGCGGAATCGGAT+TGG - chr4.2:71441001-71441020 MS.gene043168:intron 55.0%
GGTAGAGACAAAGGGGGTTG+TGG - chr4.2:71440657-71440676 MS.gene043168:intron 55.0%
GTCCCTGGTAGAGACAAAGG+GGG - chr4.2:71440651-71440670 MS.gene043168:intron 55.0%
GTGGGTAACCCTTAGTCCTG+GGG - chr4.2:71440851-71440870 MS.gene043168:intron 55.0%
GTTGGTTGATCGTCAGTCCC+TGG - chr4.2:71440636-71440655 MS.gene043168:intron 55.0%
TAGGTGTGGAAGTGGCAGAG+AGG - chr4.2:71437837-71437856 MS.gene043168:intron 55.0%
TAGTCCTGGGGAGCTACCTT+CGG - chr4.2:71440863-71440882 MS.gene043168:intron 55.0%
! GCAGGAGGTATGTCGAAACC+AGG + chr4.2:71442456-71442475 None:intergenic 55.0%
! TGTGGAGAAGTGGAGTGTCC+GGG - chr4.2:71439015-71439034 MS.gene043168:intron 55.0%
!! CAAGATCGGAAGTGTTGCCG+TGG + chr4.2:71441716-71441735 None:intergenic 55.0%
!! CTAGGCCTTAGCCTTAGGTC+AGG + chr4.2:71440761-71440780 None:intergenic 55.0%
!! CTTGGTTCTGCCGTCTGTTG+GGG - chr4.2:71440544-71440563 MS.gene043168:intron 55.0%
AGACTCGGGTCGGATCTGAG+CGG - chr4.2:71440990-71441009 MS.gene043168:intron 60.0%
CCGACGCCCAAGTAAGTGAG+AGG - chr4.2:71440693-71440712 MS.gene043168:intron 60.0%
CGCCGTGAGCTTAGCTCAGT+TGG + chr4.2:71439082-71439101 None:intergenic 60.0%
CGTGGTCAACCCTCGAACCT+CGG - chr4.2:71440896-71440915 MS.gene043168:intron 60.0%
CTCGAACCTCGGGTAACCCT+CGG - chr4.2:71440907-71440926 MS.gene043168:intron 60.0%
GAGGGTTACCCGAGGTTCGA+GGG + chr4.2:71440908-71440927 None:intergenic 60.0%
GGGTCGGATCTGAGCGGAAT+CGG - chr4.2:71440996-71441015 MS.gene043168:intron 60.0%
GTGGTCAACCCTCGAACCTC+GGG - chr4.2:71440897-71440916 MS.gene043168:intron 60.0%
AGGGTTGACCACGCTCACGC+AGG + chr4.2:71440889-71440908 None:intergenic 65.0%
CGAGGGTTACCCGAGGTTCG+AGG + chr4.2:71440909-71440928 None:intergenic 65.0%
CGTTTAGCAGCGGCGGCTGT+AGG + chr4.2:71437280-71437299 None:intergenic 65.0%
ACCACGCTCACGCAGGCCGA+AGG + chr4.2:71440882-71440901 None:intergenic 70.0%
ACCTTCGGCCTGCGTGAGCG+TGG - chr4.2:71440878-71440897 MS.gene043168:intron 70.0%
CAGGCCGAAGGTAGCTCCCC+AGG + chr4.2:71440870-71440889 None:intergenic 70.0%
TGCAGGCCGAGGGTTACCCG+AGG + chr4.2:71440916-71440935 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 71436930 71443073 71436930 ID=MS.gene043168
chr4.2 mRNA 71436930 71443073 71436930 ID=MS.gene043168.t1;Parent=MS.gene043168
chr4.2 exon 71442947 71443073 71442947 ID=MS.gene043168.t1.exon1;Parent=MS.gene043168.t1
chr4.2 CDS 71442947 71443073 71442947 ID=cds.MS.gene043168.t1;Parent=MS.gene043168.t1
chr4.2 exon 71441946 71442163 71441946 ID=MS.gene043168.t1.exon2;Parent=MS.gene043168.t1
chr4.2 CDS 71441946 71442163 71441946 ID=cds.MS.gene043168.t1;Parent=MS.gene043168.t1
chr4.2 exon 71438017 71438522 71438017 ID=MS.gene043168.t1.exon3;Parent=MS.gene043168.t1
chr4.2 CDS 71438017 71438522 71438017 ID=cds.MS.gene043168.t1;Parent=MS.gene043168.t1
chr4.2 exon 71436930 71437746 71436930 ID=MS.gene043168.t1.exon4;Parent=MS.gene043168.t1
chr4.2 CDS 71436930 71437746 71436930 ID=cds.MS.gene043168.t1;Parent=MS.gene043168.t1
Gene Sequence

>MS.gene043168

ATGGCAGAATCCAACGAAGTGTTGTTAGATGCTCAGTTAGCTCTTGTTGATGGAGTCGTTGACTACAGAGGACAACCTGCCGTTAGGTCCAAATCTGGTTATTGGAGATCTGCTTGGTTTATCATAGGTACACAATTTCATATATCTCTTAATTAATTAATAGTGACAATAAAGGTTGGTTTCATAAAGAGTTAGTTTATACCTATGAAGCACAAACACGGTTGTTGGACACTAATACGCCGATACCGTTTGAGAAAATCACATAATTCAATATAAATTAGGACACGCTTTATCTGAGGAGTGGATGTGCTTCATTGTCTAGACACTATAAATGCATGAATTCAACTCCTACAGCCGCCGCTGCTAAACGATTATATATCACTCTAAATATAAGTGTCAACGCTCTTTGAACTTTGATATTTGGTATGACTCAGATGAAACTTTGGAACCCAACTCAACTAAATTTTGTTACTAAAAAAACTCTACTATTTAATCTTTCTTATGTCATCCACCAAATCAATTTTATATCATCTTCTGCGGTTTGAATTAGTCCATTTTAATATGGATTAATTTATTGCTGCTACAGATTCTAGTTCCTAACACACTGGAAAGTGGACAATATGGGCCTGTTTGAAATACTTTTCAAAATTTTCTAGTTTTTAAAAACTTAAAAATTAAAAATTTGTTTGATAAACTATTTTTAAAATATAAGTTTTGAAGAGTTTTGGTTTTTTTAATTGTTGGGAACTAAAAAACTGAAACAGGTAAATTGTGTTTTGGTTTTTAATTTTTAAAACATATTTCGAAAACTAAAAACAAAAAGTGTTTCAAACATGCCCTATATATTTACTTTTCACATTCCTTTTAAATTGTGATGAGAATTGAAATGGATTATGAATGTTATGTTTAGGTGTGGAAGTGGCAGAGAGGATATCATATTTTGGAATTAAGGGAAACTTGATATCATATCTAACAGGACCACTCAAACAAAGCACTGCAACAGCTGCTAAGAATGTCAATGTTTGGTCTGGAACAGCTTCTCTACTTCCTCTGTTAGGTGCTTTCATTGCTGATTCTTTTCTTGGACGCTACCGCACAATCATACTTGCTTCTCTTATCTACATATTGGTAGGTTCTGTTCTTTACTTTTTTTAACATTTTCTTTTATTTCTTTACAATTCTAATTCTAATCTATTAAATAATTATTATATTTGACAACAATCATGTTTTACATTTTCTTTTATTTTTTTATTGCGTTAACGCGTGTATATTAACAACGATATTTTATCGAAATTTACGTGTAAATTACAAAGAATATTTTATATAATTTTTTTGATATAGATTAAAATTATAAGTATGAATATTTGTGATTTTCAGATGTAACAAATTCAACAAACCATAGTTATCATTTTGTATTGACAACAATAATATTAAAAATATAATAAAATTCTTATTTTTTTTTTTTAATAACACCAACAATATAACATTATTATAGGAAAATATGTTTAAGGGTATAATAAAAAATCAGCTCAAAAGAGCCGAAACATGCTATTTTCTTTGTATATAGTATGATACAAGTATATACTTCCCCCGATATGAAATATAAACAAAATTAATAGTTGACAAAATTAATAGTTGAAAAGTCAATGTACATGGTTAAAAGTTTATCAACATACATCAGATTTTCACCTACTTTTTACGTTTATATTTCATTCCGGAAGAAGTATAAATTATCGAAAAACGTCAACTAATGCTTTAAAGACACTAAATAAAGATTTATTTTTTTGGAAAATGTGTATTCAACTTTTTTAACGTTTTAAAATTTTTATTTTCAGTAAAAAATTTATACTATATTTTATTCCGGAAGAAGTATAAATTATCGAAAAACGTCAACTAATGCTTTAAAGACACTAAATAAAGATTTATTTTTTTGGAAAATGTGTATTCAACTTTTTTAACGTTTTAAAATTTTTATTTTCAGTAAAAAATTTATACTTTTAGTGTCTTTAAAAAATATCACTGGACCACTTTTTTTTTTTTTTTTTGAGGTCAAGTAGCCTAGTGGCTAGAACTCACACATTTTAATGTGGAGAAGTGGAGTGTCCGGGATTCAAACCCCAACTCCTGCATATAATATACAATATTCCTACCAACTGAGCTAAGCTCACGGCGATTTGAACCACTTGTTATCATTGCCTTAAATTATTTGTTGCAAAAATCTTTTTGTGTTTCTCAATTTTTCTATATGACAAGTGTCCTAATTTTGTTTTGTAAATGCAAGTAAAAAAAAAGGTAACAATTACACAATTTTTCTCCTAGACCTTTCACATTAAAATACTATGTTCAAAATTGTAGTATTCAAAGGAGGAGTGTTATAGATACCTTCTTTCTAACACTCTCTAGTCTCTAATATTCACTCTTCTATTTGATGAAATTCACGTGGGTATCTCTCAATTTTTCTATATGACAAGTGTCCTAATTTTGTTTTGTAAATGCAAGTAAAAAAAAAGGTAACAATTACACAATTTTTCTCCTAGACCTTTCACATTAAAATACTATGTTCAAAATTGTAGTATTCAAAGGAGGAGTGTTATAGATACCTTCTTTCTAACACTCTCTAGTCTCTAATATTCACTCTTCTATTTGATGAAATTCACGTGGGTATCAAACTTTGAAAATGGATCCCACATAAAGTCGTTAGACGTACATGGATTTCACTCGATATGAGAGTGATTGTTAGAGAGAGTGCTAGAAAAAGAGTGTTCCTAACATTTCTTGCATTCAAAGATACCACTCCGTCCCAAAATAGGTGACATTGTCGACTGTTGCACACATGTCAATGCACATCTTTGACCTTTGATATACTTGACCATTTGTCTTTAATTAATACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAATTTGTTTCAAAATGAATGTCGCTTTCATTTTCCAATGCAATAATAACTTTTTCTTTTCAATTTTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAGTAACCATTCTTTTTCTTTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTAGTAGAAAAATATGGATAAAGTATGTTATATGAATAATGCACATAGTCTCACAATGTCACTTATTTTAAAATAAAAGGAGTACACTCTAATTTTAATACTCCCTCCGATGACTGTTATAAGTAAAAAACATTTTTTTTAAATTCATTGAATAATTGATGTATCTGATCTATATATAGACCATCTACATTGTTTTTTTTTTGTCAAGTAGTCTAGTGGCTAAAATTCACATTTTAAGGTGAACAAGTGAGTTTTTTAGGGTTCGAACCCTGATCCCAACATATATTATGCAATGTCCTTATCAACTGAGGTAAACTTATAGAGAATTTCCTTGACAAATCCAAATAACAAACTAATTAACCTCACTTAAATCAAATTCTCTAATTATGAGAGAAATTTTCAAAATGTATGTTTAGAAATTATTCGGTTTGACCTAAGAGGATGGTTGAGCTACTTGGTTCTGCCGTCTGTTGGGGTTAATCCGTTGATCTATTCGTCGTTTGCCTGGTTCGGTTGAACAGTGCTGAGATGATAACTTTAGTGAGGTTGGTTGATCGTCAGTCCCTGGTAGAGACAAAGGGGGTTGTGGTCATGCACATGTTCCGACGCCCAAGTAAGTGAGAGGTTCATGAGGAGAGGTCACAAGTTTAGGGTAAGAAGTGTCATACCTGACCTAAGGCTAAGGCCTAGGTATATATAGGGTTTAGGTACAACTTGGCTGGCAAACCTTATCATGACAATTGTACATGTTGGTACGGATGTGGGTAACCCTTAGTCCTGGGGAGCTACCTTCGGCCTGCGTGAGCGTGGTCAACCCTCGAACCTCGGGTAACCCTCGGCCTGCATCATAATCTGGTGAATTTTAGGGTGTGCTCGTCGTATGGTATCACATGGTTAATAGACTCGGGTCGGATCTGAGCGGAATCGGATTGGGCCTTAGCTCAGTCCGGAACAAGAAAATTGATTGTCTGTATTAGTTATATATTGATTTAACTTTGTGCACTATTTTCTTCACTATTTGTTGTACTCCCTCAACACAAGATCTCACATTAGTTTCCCTTTATTCTACATATCCTAACACACGATCTTTCATTATCTTGATGTATACTCCCTCTTGTCATTGTTATTAGCTAAAAACTACTTTTTAGATTCATTAAATGAGTGATGTATATGGTAGACAACATACATCATTTATTTATTGAATCTAAAATGTAGTTTTTTGTTTATAACAGTGACCGGAGGCAGTATGATATATCAATCAAGTGGCCACAATTAATTATCTATGTTATAGGAACTTTAACGATTTCACATACATTAAAAAAAAGGGATAGACAGATAGCCATATTGGCTCATGTTTTGATGTTGGTCATTGGCTTAATATAATTTACAGGGACTAGGCTTGTTAACATTTTCAACTATGCTTCCTTCACTCACATCTTGTTCTACTCAATCACAAGTAATCTTATTCTTCATCTCACTCTATCTAGTTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTTGGGGCGGATCAATTCGACGAAAAATATCCCGAGGAGCATATAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACTATGGTTGCAGGTGCCACGGCAACACTTCCGATCTTGACTTATATTCAAGATAACTATAGTTGGATTCTTGGATTTGGAATCTCTTGTGTTGTAATGATCATTGCTTTGATTGTTTTCTTGCTTGGAACAAGGACATATAGGTTTAACATTAAGGATAATAATAAGAGTCCTTTTCTTAGAATCGGCCGTGTATTCGTTGCAGCTGTAAGAAATTGGCGAAACACCTTATCAACAGCGGATATTGAAGAGGATGGACTACTTCGCCGTCAAAAATCTGAACAATTCAAGTAAGAATAAAAATGCTTATTTCTGCTTGTTTTGAAATTCTGTGTCTAGTAACTAAATTTTGTTAATATAATTAGTAGCATTCTGAAAGTAGAACATATGAAATACATTATATAGTTCATCTTGTTTTTGTCTTCAGTTTTTAAAGTCACTCTTTGAGCTTTATAATACATTGTATGATGAAAATACATCAATGTCCCAAATGGAAATAAACAGAATGTAATTTATGAACATGTCATAATTTACTTTGATTGTATTTTCAACAAGGGCAGGTTCCTCAACATGGCATTGCTAAAACCAAAGGGATCCAAAGAAGACGAGACTTGTAGTCACAGTGAGATCGAAGAAGCAAAGGCAGTACTAAGGTTGGTTCCAATTTGGGCTACAACTTTGGTTTATGGCATTGTCTTTGCTCAAGTTTCTACATTCTTCACCAAGCAAGGGAGTTCTATGCAGAAAACAATAGTTCCTGGTTTCGACATACCTCCTGCCTCTCTTCAAACGATAACCAATGTCGCCATTGTTTTCTTTAGCCCCATCTACGACCGGATATTTGTGCCACTAGCAAGAATTATCACTGGAAAACCCTCAGGCATCACATTGCTTCAAAGAATTGGCACTGGAATTTTCATATCAATATTCACAGTAGTATTTGCAGCCTTTGTTGAGATTAAAAGACTAAAAATAGCACAAGAGCATGGTCTTGTTGATGATCCAAATGCAACTGTTCCAATGCGTATATGGTGGTTGATTCCTCAATATTTTCTGTTTGGAGTTTCTGAGGTTTTTACTATGGTTGGTCTTCAGGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTTGCACTCTATTTGAGTATTGTTGGTGTTGGAAGCTTTCTAAGTGGCTTTCTCATTTCTTTGATAGAATATTTTAGTGGTAAAGATGGTCATGAAAGTTGGTTCTGTGACAATATCAATAAGGCACATCTTGATTACTTTTATTGGCTACTTGCTGGATTAAGTGTCATGGGGTTTACTTTGTTCGTTTACTTTGCAAAATCTTACATTTATAATCACAAAGGTATCATCTCATAA
Protein sequence

>MS.gene043168.t1

MAESNEVLLDAQLALVDGVVDYRGQPAVRSKSGYWRSAWFIIGVEVAERISYFGIKGNLISYLTGPLKQSTATAAKNVNVWSGTASLLPLLGAFIADSFLGRYRTIILASLIYILGLGLLTFSTMLPSLTSCSTQSQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEKYPEEHIARSSFFNWWYFTMVAGATATLPILTYIQDNYSWILGFGISCVVMIIALIVFLLGTRTYRFNIKDNNKSPFLRIGRVFVAAVRNWRNTLSTADIEEDGLLRRQKSEQFKFLNMALLKPKGSKEDETCSHSEIEEAKAVLRLVPIWATTLVYGIVFAQVSTFFTKQGSSMQKTIVPGFDIPPASLQTITNVAIVFFSPIYDRIFVPLARIITGKPSGITLLQRIGTGIFISIFTVVFAAFVEIKRLKIAQEHGLVDDPNATVPMRIWWLIPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIVGVGSFLSGFLISLIEYFSGKDGHESWFCDNINKAHLDYFYWLLAGLSVMGFTLFVYFAKSYIYNHKGIIS