AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037392

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037392.t1 MTR_1g115215 97.708 1047 17 3 1 1047 1 1040 0.0 2107
MS.gene037392.t1 MTR_2g012830 58.882 805 300 12 258 1047 515 1303 0.0 900
MS.gene037392.t1 MTR_1g044120 31.948 770 329 17 320 1045 534 1152 1.89e-107 362
MS.gene037392.t1 MTR_2g084630 28.462 1040 516 31 95 1045 121 1021 7.71e-100 338
MS.gene037392.t1 MTR_4g049500 30.374 856 389 24 267 1046 210 934 4.20e-99 334
MS.gene037392.t1 MTR_7g089190 28.856 804 366 20 279 1045 186 820 4.02e-95 321
MS.gene037392.t1 MTR_2g084630 27.160 1053 516 33 95 1045 121 1024 9.30e-90 310
MS.gene037392.t1 MTR_1g035330 41.985 131 76 0 894 1024 588 718 1.60e-25 114
MS.gene037392.t1 MTR_7g090960 44.094 127 71 0 890 1016 1206 1332 1.07e-24 112
MS.gene037392.t1 MTR_7g090960 44.094 127 71 0 890 1016 1125 1251 1.29e-24 112
MS.gene037392.t1 MTR_5g020000 42.029 138 77 2 894 1028 524 661 1.01e-23 108
MS.gene037392.t1 MTR_4g035100 30.137 292 171 6 785 1045 1693 1982 3.91e-23 107
MS.gene037392.t1 MTR_4g035100 23.511 319 159 7 411 705 1508 1765 3.56e-16 84.7
MS.gene037392.t1 MTR_4g035100 30.137 292 171 6 785 1045 1693 1982 3.91e-23 107
MS.gene037392.t1 MTR_4g035100 23.511 319 159 7 411 705 1508 1765 3.56e-16 84.7
MS.gene037392.t1 MTR_1g053955 40.476 126 75 0 894 1019 1080 1205 4.80e-23 107
MS.gene037392.t1 MTR_1g053955 28.251 223 127 6 505 706 601 811 3.13e-15 81.6
MS.gene037392.t1 MTR_5g067980 26.835 395 209 12 396 748 475 831 5.13e-23 107
MS.gene037392.t1 MTR_5g067980 31.973 147 80 3 875 1012 1457 1592 2.97e-15 81.6
MS.gene037392.t1 MTR_4g096930 37.333 150 87 3 894 1041 1067 1211 1.21e-20 99.4
MS.gene037392.t1 MTR_4g096930 26.437 174 116 4 532 705 866 1027 2.21e-12 72.4
MS.gene037392.t1 MTR_1g069755 38.333 120 74 0 894 1013 753 872 5.87e-20 96.7
MS.gene037392.t1 MTR_1g069755 24.062 320 185 11 411 710 442 723 6.15e-11 67.4
MS.gene037392.t1 MTR_4g078460 38.095 126 78 0 894 1019 825 950 3.31e-19 94.4
MS.gene037392.t1 MTR_4g078495 38.095 126 78 0 894 1019 539 664 3.50e-19 94.0
MS.gene037392.t1 MTR_4g118845 41.525 118 68 1 894 1010 507 624 8.61e-19 92.8
MS.gene037392.t1 MTR_4g118845 27.273 176 116 3 531 706 307 470 1.54e-14 79.0
MS.gene037392.t1 MTR_4g118845 41.525 118 68 1 894 1010 320 437 1.11e-18 92.4
MS.gene037392.t1 MTR_4g118845 26.816 179 119 3 528 706 117 283 1.95e-14 78.6
MS.gene037392.t1 MTR_2g020000 41.525 118 68 1 894 1010 510 627 1.14e-18 92.4
MS.gene037392.t1 MTR_2g020000 26.966 178 118 3 529 706 308 473 3.54e-14 77.8
MS.gene037392.t1 MTR_8g030550 39.024 123 71 2 894 1015 1331 1450 2.25e-18 92.0
MS.gene037392.t1 MTR_8g030550 39.024 123 71 2 894 1015 1331 1450 2.57e-18 91.7
MS.gene037392.t1 MTR_8g030550 39.024 123 71 2 894 1015 1331 1450 2.69e-18 91.7
MS.gene037392.t1 MTR_3g053910 39.062 128 75 2 894 1020 905 1030 3.79e-18 91.3
MS.gene037392.t1 MTR_3g053910 29.282 181 115 4 527 706 693 861 3.78e-15 81.3
MS.gene037392.t1 MTR_3g053910 39.062 128 75 2 894 1020 934 1059 4.04e-18 90.9
MS.gene037392.t1 MTR_3g053910 29.282 181 115 4 527 706 722 890 4.31e-15 81.3
MS.gene037392.t1 MTR_8g094070 36.667 120 76 0 894 1013 759 878 5.02e-18 90.5
MS.gene037392.t1 MTR_8g094070 36.667 120 76 0 894 1013 759 878 5.62e-18 90.1
MS.gene037392.t1 MTR_5g090090 38.281 128 76 2 894 1020 951 1076 6.34e-18 90.1
MS.gene037392.t1 MTR_5g090090 22.222 297 170 9 412 706 670 907 2.01e-11 68.9
MS.gene037392.t1 MTR_5g090090 38.281 128 76 2 894 1020 951 1076 1.00e-17 89.7
MS.gene037392.t1 MTR_5g090090 22.222 297 170 9 412 706 670 907 2.11e-11 68.9
MS.gene037392.t1 MTR_3g106210 36.719 128 78 2 894 1020 628 753 1.99e-17 88.6
MS.gene037392.t1 MTR_3g106210 36.719 128 78 2 894 1020 628 753 2.04e-17 88.6
MS.gene037392.t1 MTR_3g106210 36.719 128 78 2 894 1020 628 753 2.42e-17 88.2
MS.gene037392.t1 MTR_3g106210 36.719 128 78 2 894 1020 628 753 2.46e-17 88.2
MS.gene037392.t1 MTR_1g105050 35.484 155 96 2 894 1047 704 855 2.96e-17 87.8
MS.gene037392.t1 MTR_1g105050 26.562 192 119 5 529 709 493 673 1.08e-13 76.3
MS.gene037392.t1 MTR_5g005840 34.641 153 96 2 894 1045 690 839 4.11e-17 87.4
MS.gene037392.t1 MTR_5g005840 26.882 186 115 4 529 704 480 654 2.39e-13 75.1
MS.gene037392.t1 MTR_4g118720 38.710 124 75 1 894 1016 1342 1465 5.10e-17 87.4
MS.gene037392.t1 MTR_1g013190 35.938 128 79 2 894 1020 626 751 5.13e-17 87.4
MS.gene037392.t1 MTR_1g013190 25.126 199 131 6 527 724 422 603 8.93e-12 70.1
MS.gene037392.t1 MTR_7g045505 32.877 146 86 1 894 1027 334 479 8.42e-17 86.3
MS.gene037392.t1 MTR_7g045505 27.536 207 134 6 529 724 117 318 5.73e-12 70.5
MS.gene037392.t1 MTR_7g078090 37.398 123 73 2 894 1015 1339 1458 8.52e-17 86.7
MS.gene037392.t1 MTR_7g045505 32.877 146 86 1 894 1027 334 479 9.24e-17 86.3
MS.gene037392.t1 MTR_7g045505 27.536 207 134 6 529 724 117 318 9.61e-12 70.1
MS.gene037392.t1 MTR_7g039320 32.192 146 87 1 894 1027 336 481 4.14e-16 84.0
MS.gene037392.t1 MTR_7g039320 32.192 146 87 1 894 1027 336 481 4.30e-16 84.0
MS.gene037392.t1 MTR_1g080420 35.211 142 78 2 894 1021 1001 1142 6.56e-16 83.6
MS.gene037392.t1 MTR_1g080420 35.211 142 78 2 894 1021 1132 1273 8.02e-16 83.6
MS.gene037392.t1 MTR_4g088650 30.872 149 95 3 894 1035 1032 1179 3.31e-14 78.2
MS.gene037392.t1 MTR_7g029525 31.690 142 91 2 894 1029 1138 1279 7.83e-14 77.0
MS.gene037392.t1 MTR_5g004720 30.769 156 103 3 894 1045 557 711 1.06e-13 76.3
MS.gene037392.t1 MTR_4g124090 35.345 116 75 0 894 1009 488 603 2.69e-13 74.7
MS.gene037392.t1 MTR_7g450780 30.000 140 93 2 894 1028 1163 1302 5.50e-13 73.9
MS.gene037392.t1 MTR_7g450790 29.012 162 107 3 878 1032 1237 1397 7.21e-13 73.9
MS.gene037392.t1 MTR_7g450820 29.940 167 106 5 870 1029 1029 1191 8.01e-12 70.1
MS.gene037392.t1 MTR_2g437480 33.858 127 78 3 887 1008 860 985 3.02e-11 68.2
MS.gene037392.t1 MTR_8g037345 33.333 126 78 3 887 1007 711 835 4.16e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037392.t1 AT1G50410 63.830 940 286 14 120 1047 84 981 0.0 1137
MS.gene037392.t1 AT1G50410 63.830 940 286 14 120 1047 84 981 0.0 1137
MS.gene037392.t1 AT1G50410 63.830 940 286 14 120 1047 84 981 0.0 1137
MS.gene037392.t1 AT3G20010 56.595 1069 363 21 58 1047 1 1047 0.0 1085
MS.gene037392.t1 AT3G20010 56.595 1069 363 21 58 1047 1 1047 0.0 1085
MS.gene037392.t1 AT3G20010 56.595 1069 363 21 58 1047 1 1047 0.0 1085
MS.gene037392.t1 AT3G20010 65.025 792 239 12 283 1047 1 781 0.0 995
MS.gene037392.t1 AT3G20010 64.668 767 233 12 308 1047 1 756 0.0 952
MS.gene037392.t1 AT1G50410 60.119 840 281 14 120 947 84 881 0.0 937
MS.gene037392.t1 AT3G20010 52.637 967 357 21 58 945 1 945 0.0 884
MS.gene037392.t1 AT3G20010 52.637 967 357 21 58 945 1 945 0.0 884
MS.gene037392.t1 AT3G20010 52.637 967 357 21 58 945 1 945 0.0 884
MS.gene037392.t1 AT1G61140 54.096 830 331 15 228 1046 329 1119 0.0 813
MS.gene037392.t1 AT1G61140 54.096 830 331 15 228 1046 487 1277 0.0 811
MS.gene037392.t1 AT1G11100 54.003 787 316 11 272 1046 517 1269 0.0 790
MS.gene037392.t1 AT1G11100 54.003 787 316 11 272 1046 516 1268 0.0 790
MS.gene037392.t1 AT1G11100 54.003 787 316 11 272 1046 374 1126 0.0 789
MS.gene037392.t1 AT1G11100 51.601 781 300 9 272 1046 374 1082 0.0 749
MS.gene037392.t1 AT1G11100 51.601 781 300 9 272 1046 517 1225 0.0 749
MS.gene037392.t1 AT3G16600 47.122 556 180 7 256 804 8 456 1.40e-165 502
MS.gene037392.t1 AT3G16600 74.227 97 25 0 930 1026 493 589 4.27e-36 146
MS.gene037392.t1 AT1G61140 53.992 526 214 11 228 747 494 997 3.81e-164 511
MS.gene037392.t1 AT5G43530 31.727 747 337 18 320 1045 682 1276 1.68e-103 353
MS.gene037392.t1 AT5G22750 30.841 749 361 17 320 1045 414 1028 6.95e-103 347
MS.gene037392.t1 AT1G05120 31.704 716 335 15 408 1045 192 831 1.77e-91 311
MS.gene037392.t1 AT1G05120 31.704 716 335 15 408 1045 235 874 3.60e-91 311
MS.gene037392.t1 AT5G05130 29.602 804 393 18 257 1024 193 859 4.01e-89 306
MS.gene037392.t1 AT1G02670 32.164 342 154 7 403 717 172 462 1.14e-36 146
MS.gene037392.t1 AT1G02670 47.368 152 79 1 894 1045 516 666 2.50e-36 147
MS.gene037392.t1 AT1G02670 28.962 366 183 10 403 760 172 468 3.96e-30 128
MS.gene037392.t1 AT1G02670 47.368 152 79 1 894 1045 512 662 2.63e-36 147
MS.gene037392.t1 AT1G02670 30.390 385 176 9 403 760 145 464 5.53e-36 146
MS.gene037392.t1 AT1G02670 47.368 152 79 1 894 1045 539 689 3.07e-36 147
MS.gene037392.t1 AT1G02670 32.164 342 154 7 403 717 172 462 7.83e-36 146
MS.gene037392.t1 AT1G02670 47.368 152 79 1 894 1045 527 677 3.70e-36 147
MS.gene037392.t1 AT1G02670 28.767 365 185 9 403 760 183 479 4.06e-30 128
MS.gene037392.t1 AT1G02670 32.164 342 154 7 403 717 145 435 3.79e-36 146
MS.gene037392.t1 AT1G02670 52.475 101 48 0 894 994 512 612 6.28e-27 117
MS.gene037392.t1 AT1G02670 32.164 342 154 7 403 717 172 462 5.39e-36 146
MS.gene037392.t1 AT1G02670 52.475 101 48 0 894 994 539 639 6.81e-27 117
MS.gene037392.t1 AT2G02090 42.857 154 77 2 879 1023 582 733 1.53e-27 120
MS.gene037392.t1 AT2G40770 26.899 316 173 8 410 702 501 781 1.50e-26 118
MS.gene037392.t1 AT2G40770 31.902 163 100 3 894 1045 1451 1613 7.17e-16 83.6
MS.gene037392.t1 AT2G40770 26.899 316 173 8 410 702 501 781 1.50e-26 118
MS.gene037392.t1 AT2G40770 31.902 163 100 3 894 1045 1451 1613 7.17e-16 83.6
MS.gene037392.t1 AT2G40770 26.899 316 173 8 410 702 501 781 1.50e-26 118
MS.gene037392.t1 AT2G40770 31.902 163 100 3 894 1045 1451 1613 7.17e-16 83.6
MS.gene037392.t1 AT3G57300 41.549 142 83 0 890 1031 1220 1361 2.05e-25 114
MS.gene037392.t1 AT3G57300 41.549 142 83 0 890 1031 1220 1361 2.05e-25 114
MS.gene037392.t1 AT3G57300 41.549 142 83 0 890 1031 1253 1394 2.18e-25 114
MS.gene037392.t1 AT3G54280 30.802 237 136 4 835 1045 1750 1984 2.33e-24 111
MS.gene037392.t1 AT3G54280 23.404 517 238 17 231 720 1398 1783 3.28e-18 91.3
MS.gene037392.t1 AT5G66750 40.299 134 79 1 894 1026 542 675 2.42e-24 110
MS.gene037392.t1 AT3G54280 30.802 237 136 4 835 1045 1781 2015 2.91e-24 111
MS.gene037392.t1 AT3G54280 23.404 517 238 17 231 720 1429 1814 5.19e-18 90.9
MS.gene037392.t1 AT3G12810 41.732 127 74 0 891 1017 1086 1212 2.32e-23 108
MS.gene037392.t1 AT3G12810 28.177 181 110 4 534 706 654 822 3.14e-13 75.1
MS.gene037392.t1 AT3G12810 41.732 127 74 0 891 1017 1090 1216 2.49e-23 108
MS.gene037392.t1 AT3G12810 28.177 181 110 4 534 706 658 826 3.22e-13 75.1
MS.gene037392.t1 AT3G54460 21.053 684 398 20 408 1041 753 1344 2.85e-23 107
MS.gene037392.t1 AT3G54460 21.053 684 398 20 408 1041 456 1047 3.45e-23 107
MS.gene037392.t1 AT5G63950 36.154 130 83 0 894 1023 733 862 1.57e-19 95.5
MS.gene037392.t1 AT5G63950 36.154 130 83 0 894 1023 750 879 1.77e-19 95.1
MS.gene037392.t1 AT1G03750 38.889 126 77 0 894 1019 546 671 1.96e-19 94.7
MS.gene037392.t1 AT2G44980 37.778 135 83 1 894 1027 386 520 2.13e-19 94.7
MS.gene037392.t1 AT2G44980 26.961 204 136 6 529 724 172 370 1.16e-13 76.3
MS.gene037392.t1 AT5G44800 38.400 125 75 1 894 1016 1022 1146 6.41e-19 93.6
MS.gene037392.t1 AT5G44800 26.554 177 118 4 529 705 818 982 4.78e-11 68.2
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 804 923 1.55e-18 92.4
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G18760 35.833 120 77 0 894 1013 745 864 1.69e-18 92.0
MS.gene037392.t1 AT2G13370 38.281 128 76 2 894 1020 957 1082 2.29e-18 92.0
MS.gene037392.t1 AT2G13370 26.519 181 120 4 527 706 747 915 6.72e-12 70.9
MS.gene037392.t1 AT2G13370 38.281 128 76 2 894 1020 957 1082 2.29e-18 92.0
MS.gene037392.t1 AT2G13370 26.519 181 120 4 527 706 747 915 6.72e-12 70.9
MS.gene037392.t1 AT2G13370 38.281 128 76 2 894 1020 957 1082 2.29e-18 92.0
MS.gene037392.t1 AT2G13370 26.519 181 120 4 527 706 747 915 6.72e-12 70.9
MS.gene037392.t1 AT5G18620 39.831 118 70 1 894 1010 513 630 2.33e-18 91.7
MS.gene037392.t1 AT5G18620 25.843 178 120 3 529 706 311 476 9.00e-14 76.6
MS.gene037392.t1 AT5G18620 39.831 118 70 1 894 1010 513 630 2.41e-18 91.7
MS.gene037392.t1 AT5G18620 25.843 178 120 3 529 706 311 476 9.14e-14 76.6
MS.gene037392.t1 AT2G44980 35.862 145 82 2 894 1027 394 538 3.55e-18 90.9
MS.gene037392.t1 AT2G44980 26.033 242 156 8 501 724 142 378 4.01e-14 77.8
MS.gene037392.t1 AT2G44980 35.862 145 82 2 894 1027 395 539 3.58e-18 90.9
MS.gene037392.t1 AT2G44980 26.033 242 156 8 501 724 143 379 3.98e-14 77.8
MS.gene037392.t1 AT3G06400 39.831 118 70 1 894 1010 508 625 4.13e-18 90.9
MS.gene037392.t1 AT3G06400 27.374 179 118 3 528 706 305 471 4.15e-15 80.9
MS.gene037392.t1 AT3G06400 39.831 118 70 1 894 1010 508 625 4.17e-18 90.9
MS.gene037392.t1 AT3G06400 27.374 179 118 3 528 706 305 471 4.44e-15 80.9
MS.gene037392.t1 AT3G06400 39.831 118 70 1 894 1010 508 625 4.23e-18 90.9
MS.gene037392.t1 AT3G06400 27.374 179 118 3 528 706 305 471 4.37e-15 80.9
MS.gene037392.t1 AT2G25170 36.719 128 78 2 894 1020 613 738 9.01e-18 89.7
MS.gene037392.t1 AT2G25170 25.253 198 132 5 527 724 409 590 2.45e-12 72.0
MS.gene037392.t1 AT2G25170 36.719 128 78 2 894 1020 613 738 9.01e-18 89.7
MS.gene037392.t1 AT2G25170 25.253 198 132 5 527 724 409 590 2.45e-12 72.0
MS.gene037392.t1 AT2G25170 36.719 128 78 2 894 1020 630 755 9.61e-18 89.7
MS.gene037392.t1 AT2G25170 25.253 198 132 5 527 724 426 607 2.44e-12 72.0
MS.gene037392.t1 AT2G25170 36.719 128 78 2 894 1020 639 764 1.05e-17 89.7
MS.gene037392.t1 AT2G25170 25.253 198 132 5 527 724 435 616 2.80e-12 72.0
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1091 1214 1.45e-17 89.4
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1091 1214 1.47e-17 89.4
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1091 1214 1.47e-17 89.4
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1092 1215 1.47e-17 89.4
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1091 1214 1.57e-17 89.4
MS.gene037392.t1 AT2G28290 38.710 124 75 1 894 1016 1092 1215 1.57e-17 89.4
MS.gene037392.t1 AT3G06010 35.948 153 94 2 894 1045 731 880 8.03e-17 86.7
MS.gene037392.t1 AT3G06010 27.957 186 113 4 529 704 520 694 6.47e-15 80.5
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1325 1436 9.93e-17 86.7
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1325 1436 9.93e-17 86.7
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1325 1436 9.93e-17 86.7
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1326 1437 1.03e-16 86.7
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1326 1437 1.03e-16 86.7
MS.gene037392.t1 AT2G46020 40.351 114 65 2 894 1006 1326 1437 1.03e-16 86.7
MS.gene037392.t1 AT1G08600 35.211 142 78 2 894 1021 1112 1253 2.49e-16 85.1
MS.gene037392.t1 AT5G19310 34.641 153 96 2 894 1045 713 862 2.71e-16 84.7
MS.gene037392.t1 AT5G19310 26.786 224 131 6 504 705 465 677 4.86e-14 77.4
MS.gene037392.t1 AT5G19310 38.583 127 75 2 894 1019 449 573 2.80e-16 84.7
MS.gene037392.t1 AT5G19310 27.354 223 129 6 504 704 201 412 3.60e-14 77.8
MS.gene037392.t1 AT1G08600 35.211 142 78 2 894 1021 1133 1274 3.02e-16 84.7
MS.gene037392.t1 AT1G08600 35.211 142 78 2 894 1021 1133 1274 3.02e-16 84.7
MS.gene037392.t1 AT1G08600 35.211 142 78 2 894 1021 1133 1274 3.02e-16 84.7
MS.gene037392.t1 AT4G31900 31.618 136 92 1 894 1028 542 677 2.14e-15 82.0
MS.gene037392.t1 AT4G31900 26.396 197 124 4 528 724 344 519 1.66e-14 79.0
MS.gene037392.t1 AT4G31900 31.618 136 92 1 894 1028 542 677 2.36e-15 82.0
MS.gene037392.t1 AT4G31900 26.396 197 124 4 528 724 344 519 1.84e-14 79.0
MS.gene037392.t1 AT4G31900 31.618 136 92 1 894 1028 501 636 2.66e-15 81.6
MS.gene037392.t1 AT4G31900 26.396 197 124 4 528 724 303 478 2.03e-14 79.0
MS.gene037392.t1 AT3G24340 34.286 140 80 3 894 1024 945 1081 1.04e-14 79.7
MS.gene037392.t1 AT1G48310 32.414 145 98 0 872 1016 464 608 1.87e-14 78.2
MS.gene037392.t1 AT1G48310 32.414 145 98 0 872 1016 464 608 1.88e-14 78.6
MS.gene037392.t1 AT1G48310 32.414 145 98 0 872 1016 469 613 2.13e-14 78.2
MS.gene037392.t1 AT3G19210 32.051 156 101 3 894 1045 553 707 3.07e-14 78.2
MS.gene037392.t1 AT3G19210 32.051 156 101 3 894 1045 551 705 3.28e-14 77.8
MS.gene037392.t1 AT3G19210 32.051 156 101 3 894 1045 553 707 3.70e-14 77.8
MS.gene037392.t1 AT1G05490 33.813 139 84 3 894 1025 1217 1354 1.48e-12 72.8
MS.gene037392.t1 AT5G07810 33.333 114 76 0 894 1007 556 669 1.53e-12 72.8

Find 224 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTAGGTGGTTGGGTTTC+TGG 0.027826 1.3:-78283303 MS.gene037392:CDS
TGATTCACGTTCTCAATTTA+AGG 0.116064 1.3:-78278313 MS.gene037392:intron
CATTTGATGGTTCTATTTCT+AGG 0.130546 1.3:-78283158 MS.gene037392:CDS
TGAATAGAATTTCTGGATAT+TGG 0.151101 1.3:+78279284 None:intergenic
AATTCAAGGCTTCAGCTTTA+TGG 0.156810 1.3:+78280026 None:intergenic
GTAACCTTGAATAGAATTTC+TGG 0.162895 1.3:+78279277 None:intergenic
TAAAGCTGAAGCCTTGAATT+TGG 0.196050 1.3:-78280023 MS.gene037392:CDS
ATTAGTCTCTCATCAGTTTC+AGG 0.221036 1.3:+78282399 None:intergenic
AAGTTATTTAATCTGTTATT+AGG 0.236063 1.3:+78282666 None:intergenic
TTGCAAAAGTAGGTTGGTTT+AGG 0.237456 1.3:-78279508 MS.gene037392:CDS
CGCATGTCATGTTATTCTTT+TGG 0.239707 1.3:-78276184 MS.gene037392:CDS
GAACTACTCGGTTCAGTAAT+AGG 0.252859 1.3:+78279923 None:intergenic
AGGAAACCTTGGTTTAAATA+TGG 0.268636 1.3:-78276211 MS.gene037392:CDS
GAATAGAATTTCTGGATATT+GGG 0.273088 1.3:+78279285 None:intergenic
CCAGAGCTTGCTCCAGCCTT+AGG 0.279556 1.3:-78279436 MS.gene037392:CDS
ATGATTTATATAGCTACTTT+AGG 0.279893 1.3:-78279364 MS.gene037392:CDS
GAAGACCATGCTGGCGGTTC+TGG 0.285184 1.3:-78275297 MS.gene037392:CDS
CTCGGACCAGGTTGATTATT+GGG 0.293648 1.3:+78282849 None:intergenic
AATTTATGAAGCAGCATTAC+AGG 0.294583 1.3:-78282379 MS.gene037392:intron
AGTGAATCTGCGTACCGTTC+TGG 0.303097 1.3:-78282441 MS.gene037392:CDS
GCCTCCTAAAACAATTAATC+TGG 0.315310 1.3:-78278388 MS.gene037392:CDS
CTCCTCGACTAACGGTTGTT+TGG 0.316018 1.3:+78279682 None:intergenic
TTAGGAGGCAAAGTGATTAT+AGG 0.316851 1.3:+78278402 None:intergenic
AAAGGCAATCACAGATAAAA+TGG 0.318808 1.3:-78280069 MS.gene037392:CDS
TGCAAAAGTAGGTTGGTTTA+GGG 0.319202 1.3:-78279507 MS.gene037392:CDS
TGTCTAGGAACTTTGCTTGA+TGG 0.323557 1.3:-78278429 MS.gene037392:intron
CTTCCTCCATCTTTGATGCT+TGG 0.327393 1.3:-78282495 MS.gene037392:CDS
CACTGCCGAAGAACACTTGC+AGG 0.334877 1.3:+78279848 None:intergenic
GCTCGGACCAGGTTGATTAT+TGG 0.339372 1.3:+78282848 None:intergenic
CAGGTTGGCTCTGCATTTGA+TGG 0.340581 1.3:-78283171 MS.gene037392:CDS
AAACAGGAGTTTGCATTGCT+TGG 0.345698 1.3:-78280248 MS.gene037392:CDS
CACCATTGGAATTAGAAATT+CGG 0.346379 1.3:+78282790 None:intergenic
AGCTTCCAACTTCTTGTAGA+AGG 0.347975 1.3:+78278335 None:intergenic
TCTGTGATTGCCTTTGCATT+AGG 0.354321 1.3:+78280077 None:intergenic
GCAACTCCTCAAAGTTGCTT+TGG 0.369209 1.3:+78276958 None:intergenic
TCCTCGACTAACGGTTGTTT+GGG 0.372223 1.3:+78279683 None:intergenic
ATAGCTTGATCTTCAGTAGT+TGG 0.372539 1.3:+78276147 None:intergenic
AACAGGAGTTTGCATTGCTT+GGG 0.374896 1.3:-78280247 MS.gene037392:CDS
CGAATCAGAATGGTGGGATC+AGG 0.374903 1.3:-78282521 MS.gene037392:CDS
GCTGCTTCTGAAAGGAATTC+AGG 0.375573 1.3:-78283018 MS.gene037392:intron
ATTGATCGAGCTCATAGAAT+TGG 0.376291 1.3:-78276126 MS.gene037392:CDS
TACAGTTGAAGATAGAATAT+TGG 0.382555 1.3:-78276061 MS.gene037392:CDS
AAAAGAAGGTGGTGCTTGTC+TGG 0.385925 1.3:-78279410 MS.gene037392:CDS
TGCGAGGGACAGAGCTGTTA+AGG 0.386134 1.3:-78276552 MS.gene037392:CDS
ATGTGCTCTTGTAGGTGGTT+GGG 0.388007 1.3:-78283310 MS.gene037392:CDS
GATCAACCTGTTTAATAGTC+TGG 0.392290 1.3:-78277912 MS.gene037392:CDS
AAATATTCAGAGTGCACATC+TGG 0.395770 1.3:-78276692 MS.gene037392:CDS
TGTACTCACTGTTCTGTACT+AGG 0.396558 1.3:+78276879 None:intergenic
CTGCAAGTGTTCTTCGGCAG+TGG 0.399264 1.3:-78279847 MS.gene037392:CDS
TGATGGTTCTATTTCTAGGT+TGG 0.399857 1.3:-78283154 MS.gene037392:CDS
TCATCAATGGTATTCTGAAT+AGG 0.400698 1.3:+78279383 None:intergenic
CAGTGAATCTCTATTGCCTT+CGG 0.400819 1.3:+78276778 None:intergenic
AATACCTGATGTCTCATTAG+AGG 0.401255 1.3:+78280401 None:intergenic
ACCTTGTTCAAACAGGGTCT+TGG 0.402982 1.3:-78280127 MS.gene037392:intron
AGATAGAATATTGGCTCTAC+AGG 0.403717 1.3:-78276052 MS.gene037392:intron
GTGATCCGTGTCACAGTAAC+AGG 0.411769 1.3:+78276093 None:intergenic
TGAATCAAAATCTTCAATAT+CGG 0.413189 1.3:+78276742 None:intergenic
CCTAAGGCTGGAGCAAGCTC+TGG 0.413231 1.3:+78279436 None:intergenic
AGTGAATCTCTATTGCCTTC+GGG 0.416076 1.3:+78276779 None:intergenic
GGAGTAGGACCTAGCACATC+TGG 0.416344 1.3:-78282600 MS.gene037392:CDS
TTGTTTCCAGACTATTAAAC+AGG 0.420218 1.3:+78277906 None:intergenic
CAGAGCTTGCTCCAGCCTTA+GGG 0.421331 1.3:-78279435 MS.gene037392:CDS
GTCAAATACAGGAGACTTGA+TGG 0.424033 1.3:-78276590 MS.gene037392:CDS
TCCAGAAAATTGCACTGGCT+TGG 0.424086 1.3:-78280285 MS.gene037392:intron
ATCATCATCATCCAAATTCA+AGG 0.426949 1.3:+78280012 None:intergenic
CAGCATAAGGATCATACTTC+AGG 0.428885 1.3:+78279339 None:intergenic
TCAACAGAATCTTTCCCAAC+AGG 0.429310 1.3:+78277965 None:intergenic
GTAGAAGGCCCGCTCCTCAT+AGG 0.430281 1.3:+78278350 None:intergenic
GATGGTTCTATTTCTAGGTT+GGG 0.431235 1.3:-78283153 MS.gene037392:CDS
CTTTCAGAAGCAGCCCATCT+TGG 0.431602 1.3:+78283027 None:intergenic
AAAATGGTGGCATCTGCATT+TGG 0.431781 1.3:-78275321 MS.gene037392:CDS
AAAGGTAGGAAGGGATTAGA+TGG 0.436702 1.3:-78279557 MS.gene037392:CDS
ATATCCAGAAATTCTATTCA+AGG 0.436994 1.3:-78279281 MS.gene037392:CDS
TTCATTGTAAAGAACAACTT+GGG 0.444221 1.3:-78276997 MS.gene037392:CDS
TGGTAGTATTGATGTGGAAA+AGG 0.445155 1.3:-78279984 MS.gene037392:CDS
ACCATTGGAATTAGAAATTC+GGG 0.448176 1.3:+78282791 None:intergenic
GTGCTTCCATTGCTCGGACC+AGG 0.448588 1.3:+78282837 None:intergenic
TGTTCTTTACAATGAACTGC+AGG 0.451989 1.3:+78277004 None:intergenic
AGCAATCTGGCGTCAAATAC+AGG 0.452070 1.3:-78276601 MS.gene037392:CDS
CTCAAACGATAAAGAATCAT+AGG 0.453758 1.3:-78279469 MS.gene037392:CDS
AGATGACATATTCTCATAAC+CGG 0.454493 1.3:+78282767 None:intergenic
GGATGCTTCAGAGGGAAAAC+AGG 0.455159 1.3:-78280264 MS.gene037392:CDS
GCTATATAATGGAAGTAAGA+AGG 0.460022 1.3:-78279585 MS.gene037392:CDS
AGGTTGATCAGCATCTCCTT+TGG 0.461834 1.3:+78277926 None:intergenic
AATATAATTCTGATCCTGTT+GGG 0.465695 1.3:-78277979 MS.gene037392:CDS
TTCAAAACCTTACACAAAAG+TGG 0.466852 1.3:-78283274 MS.gene037392:intron
TATGTGCTCTTGTAGGTGGT+TGG 0.470245 1.3:-78283311 MS.gene037392:CDS
AATGATTTATACACAGCATA+AGG 0.470686 1.3:+78279326 None:intergenic
TTGCAGGCATATGCAGCTGC+TGG 0.472343 1.3:-78278085 MS.gene037392:intron
CACTGGCTTGGATGCTTCAG+AGG 0.473005 1.3:-78280273 MS.gene037392:CDS
TCTGCCCTGCAAGTGTTCTT+CGG 0.476335 1.3:-78279853 MS.gene037392:CDS
GTGGACTAGCATGTTGGACT+TGG 0.476758 1.3:-78276639 MS.gene037392:CDS
AAAGAAGCTGATTTACCTGC+TGG 0.477068 1.3:-78280437 MS.gene037392:CDS
TTCTAGGTTGGGCAACGAAA+GGG 0.477557 1.3:-78283142 MS.gene037392:CDS
ATTCTCATAACCGGCACCAT+TGG 0.478743 1.3:+78282776 None:intergenic
TGGAGACTATGTGCTCTTGT+AGG 0.479611 1.3:-78283318 MS.gene037392:CDS
GAAGGTTGATTTCTCCTATG+AGG 0.479926 1.3:-78278364 MS.gene037392:CDS
TGGGAAAGATTCTGTTGAAA+TGG 0.482246 1.3:-78277960 MS.gene037392:CDS
AGAGAGCTTGATGAGAAAGT+TGG 0.483880 1.3:-78279821 MS.gene037392:CDS
CTGGGAGGATTCTTCCAAGA+TGG 0.484682 1.3:-78283041 MS.gene037392:CDS
TCTGCGTACCGTTCTGGAGC+AGG 0.485246 1.3:-78282435 MS.gene037392:CDS
AGTTGTAAATTGAAGACTCC+TGG 0.487683 1.3:-78276815 MS.gene037392:CDS
TGACTTGTGCTTCCATTGCT+CGG 0.489521 1.3:+78282831 None:intergenic
TAGTTCGTCGGACGATGAGT+TGG 0.489567 1.3:-78283079 MS.gene037392:CDS
CACAGGCCCCAGGTAGGAAA+AGG 0.493320 1.3:-78279898 MS.gene037392:CDS
GAATATAATTCTGATCCTGT+TGG 0.494306 1.3:-78277980 MS.gene037392:CDS
AGTTGCCTCTGTGACGATCT+TGG 0.495610 1.3:-78276941 MS.gene037392:CDS
GAGACATCAATGGAGCAATC+TGG 0.496744 1.3:-78276614 MS.gene037392:CDS
TTGGAGGTGATTGTAGATCC+TGG 0.498865 1.3:-78283060 MS.gene037392:CDS
TATATTCCAGAAAATTGCAC+TGG 0.501956 1.3:-78280290 MS.gene037392:intron
TGATTTCTCCTATGAGGAGC+GGG 0.509422 1.3:-78278358 MS.gene037392:CDS
TGCAAGTGTTCTTCGGCAGT+GGG 0.509603 1.3:-78279846 MS.gene037392:CDS
AGGAGTTTGCATTGCTTGGG+GGG 0.512503 1.3:-78280244 MS.gene037392:CDS
CACATCTGGAGGACCACTAA+AGG 0.513599 1.3:-78276678 MS.gene037392:CDS
TTCTCAGTGGACTAGCATGT+TGG 0.514207 1.3:-78276645 MS.gene037392:CDS
AAGGCCAGCTGCTGGTACAC+TGG 0.515179 1.3:-78279879 MS.gene037392:CDS
GCCTTTCCAAGCATCAAAGA+TGG 0.516458 1.3:+78282489 None:intergenic
TTCTGGAGCAGGTGATGAAA+GGG 0.516566 1.3:-78282424 MS.gene037392:CDS
TCCATCTTTGATGCTTGGAA+AGG 0.517451 1.3:-78282490 MS.gene037392:CDS
TCCCGAATTTCTAATTCCAA+TGG 0.518955 1.3:-78282792 MS.gene037392:CDS
CAAGCCAATGCTTGATAATG+TGG 0.520836 1.3:-78283361 None:intergenic
ACCTAGCACATCTGGTGAGA+AGG 0.521088 1.3:-78282592 MS.gene037392:CDS
TTGTCCACATTATCAAGCAT+TGG 0.521854 1.3:+78283357 None:intergenic
TCACTAAAAGCAGGAAACCT+TGG 0.522451 1.3:-78276222 MS.gene037392:CDS
ACAATATTATCGACTCAACT+TGG 0.524986 1.3:-78283338 MS.gene037392:CDS
TATATTCTTTAACAAGAAGC+GGG 0.526456 1.3:+78277996 None:intergenic
TATTATGTACAGATTCAAGA+AGG 0.526786 1.3:-78282926 MS.gene037392:intron
GCGGGCCTTCTACAAGAAGT+TGG 0.526893 1.3:-78278340 MS.gene037392:CDS
ACAGGAGTTTGCATTGCTTG+GGG 0.528297 1.3:-78280246 MS.gene037392:CDS
GCGCTCTTGCAAAAGTAGGT+TGG 0.530031 1.3:-78279514 MS.gene037392:CDS
ATGCTGGCGGTTCTGGAACT+CGG 0.531077 1.3:-78275290 MS.gene037392:CDS
GCATACAAGAATCGTCATCA+TGG 0.535825 1.3:-78282621 MS.gene037392:CDS
GATGGCTCTTCTTTCGATTG+CGG 0.537917 1.3:-78279539 MS.gene037392:CDS
GTACCAGATGATTGAAAAGA+TGG 0.539039 1.3:+78282717 None:intergenic
TTCGTCGGACGATGAGTTGG+AGG 0.539395 1.3:-78283076 MS.gene037392:CDS
CTATATAATGGAAGTAAGAA+GGG 0.539807 1.3:-78279584 MS.gene037392:CDS
ATAATGCTACGTCGTACAAA+AGG 0.541045 1.3:-78279227 MS.gene037392:intron
TGGGAGGATTCTTCCAAGAT+GGG 0.542766 1.3:-78283040 MS.gene037392:CDS
CAGTAGTTGGATTCCACCAA+AGG 0.544822 1.3:+78276160 None:intergenic
TTTCTAGGTTGGGCAACGAA+AGG 0.544856 1.3:-78283143 MS.gene037392:CDS
ATTTCTAATTCCAATGGTGC+CGG 0.545046 1.3:-78282786 MS.gene037392:CDS
GGTGGCGCTCTTGCAAAAGT+AGG 0.546852 1.3:-78279518 MS.gene037392:CDS
GTTCTGGAGCAGGTGATGAA+AGG 0.546993 1.3:-78282425 MS.gene037392:CDS
AAATAGTTATCTAGATTACA+TGG 0.547848 1.3:-78283118 MS.gene037392:CDS
CGCATTGATAACAGAAGACA+TGG 0.550770 1.3:+78277062 None:intergenic
TGTACCTCTAATGAGACATC+AGG 0.551258 1.3:-78280405 MS.gene037392:intron
ACAACCAGTGTACCAGCAGC+TGG 0.551867 1.3:+78279875 None:intergenic
GTAGCTATATAAATCATCAA+TGG 0.553564 1.3:+78279370 None:intergenic
CCTAGCACATCTGGTGAGAA+GGG 0.554518 1.3:-78282591 MS.gene037392:CDS
TGGAGGTGATTGTAGATCCT+GGG 0.556404 1.3:-78283059 MS.gene037392:CDS
GGACTTGGTCGAGACATCAA+TGG 0.556406 1.3:-78276624 MS.gene037392:CDS
TTATATTCTTTAACAAGAAG+CGG 0.557473 1.3:+78277995 None:intergenic
ATGCTGATGTCACTAAAAGC+AGG 0.559813 1.3:-78276231 MS.gene037392:CDS
TAAAACAATTAATCTGGAGA+AGG 0.560183 1.3:-78278382 MS.gene037392:CDS
GGAGTTTGCATTGCTTGGGG+GGG 0.561095 1.3:-78280243 MS.gene037392:CDS
GGTAGGAAAAGGCCAGCTGC+TGG 0.562826 1.3:-78279887 MS.gene037392:CDS
GTTCATTGTAAAGAACAACT+TGG 0.563332 1.3:-78276998 MS.gene037392:CDS
CAGGAGTTTGCATTGCTTGG+GGG 0.563404 1.3:-78280245 MS.gene037392:CDS
ATGATTGAAAAGATGGTGGA+AGG 0.564345 1.3:+78282724 None:intergenic
CAAGATGGGCTGCTTCTGAA+AGG 0.564924 1.3:-78283026 MS.gene037392:CDS
AATCAACCTGGTCCGAGCAA+TGG 0.566425 1.3:-78282843 MS.gene037392:CDS
GTGAATCTCTATTGCCTTCG+GGG 0.568781 1.3:+78276780 None:intergenic
GTACTCACTGTTCTGTACTA+GGG 0.569675 1.3:+78276880 None:intergenic
GGCTCTTCTTTCGATTGCGG+TGG 0.571687 1.3:-78279536 MS.gene037392:CDS
ATCGAAATAACAGAGTCATC+AGG 0.572260 1.3:+78277091 None:intergenic
GAATCAGAATGGTGGGATCA+GGG 0.574020 1.3:-78282520 MS.gene037392:CDS
AGACTATGTGCTCTTGTAGG+TGG 0.578440 1.3:-78283315 MS.gene037392:CDS
CTCGTCCTGTTACTGTGACA+CGG 0.583353 1.3:-78276098 MS.gene037392:CDS
ATATCATCCTCCTCGACTAA+CGG 0.583591 1.3:+78279674 None:intergenic
GCATTTGGCGAAGACCATGC+TGG 0.584437 1.3:-78275306 MS.gene037392:CDS
AAGAATCGTCATCATGGAGT+AGG 0.586195 1.3:-78282615 MS.gene037392:CDS
GGTACAGACATTATACCAGC+AGG 0.590038 1.3:+78280422 None:intergenic
GACTCTGTTATTTCGATGTG+TGG 0.590515 1.3:-78277085 MS.gene037392:CDS
CGGCAACCATATTTAAACCA+AGG 0.591292 1.3:+78276205 None:intergenic
ACTGGCTTGGATGCTTCAGA+GGG 0.591785 1.3:-78280272 MS.gene037392:CDS
GATCGTTTCACGAATCAGAA+TGG 0.593273 1.3:-78282531 MS.gene037392:CDS
TGCCTCTGTGACGATCTTGG+TGG 0.594445 1.3:-78276938 MS.gene037392:CDS
GGATTTCAATACTGATCCTG+AGG 0.595725 1.3:-78276531 MS.gene037392:intron
CCCTTCTCACCAGATGTGCT+AGG 0.595968 1.3:+78282591 None:intergenic
CGTTTCACGAATCAGAATGG+TGG 0.597491 1.3:-78282528 MS.gene037392:CDS
GTTTCACGAATCAGAATGGT+GGG 0.599820 1.3:-78282527 MS.gene037392:CDS
AAAGAATCATAGGACTCAGA+TGG 0.603963 1.3:-78279459 MS.gene037392:CDS
AGTAGTTCAACACAGGCCCC+AGG 0.608515 1.3:-78279908 MS.gene037392:CDS
TGATTGAAAAGATGGTGGAA+GGG 0.609027 1.3:+78282725 None:intergenic
TTGGATGATGATGATGAGAA+TGG 0.612698 1.3:-78280004 MS.gene037392:CDS
TTGCTCTCATCCTAATGCAA+AGG 0.614230 1.3:-78280087 MS.gene037392:CDS
GCTTCAGCTTTATGGTTGCG+TGG 0.616461 1.3:+78280034 None:intergenic
AATACAGGAGACTTGATGGT+AGG 0.619105 1.3:-78276586 MS.gene037392:CDS
GGGGCCTGTGTTGAACTACT+CGG 0.619233 1.3:+78279911 None:intergenic
ATTATGTACAGATTCAAGAA+GGG 0.619950 1.3:-78282925 MS.gene037392:intron
GATTCACTAGAACTAGCAAA+CGG 0.621045 1.3:+78282456 None:intergenic
GAGTTCCAGAACCGCCAGCA+TGG 0.626039 1.3:+78275292 None:intergenic
TATTCAGAGTGCACATCTGG+AGG 0.626253 1.3:-78276689 MS.gene037392:CDS
GTGTATATATATTAGTTCGT+CGG 0.627656 1.3:-78283091 MS.gene037392:CDS
TTGATTTCTCCTATGAGGAG+CGG 0.628332 1.3:-78278359 MS.gene037392:CDS
TAAAATCAAAGCTGTCCTTG+AGG 0.629967 1.3:-78276849 MS.gene037392:CDS
CATCTTGGAAGAATCCTCCC+AGG 0.631366 1.3:+78283042 None:intergenic
GTTCTTTACAATGAACTGCA+GGG 0.633934 1.3:+78277005 None:intergenic
ACTGCCGAAGAACACTTGCA+GGG 0.634815 1.3:+78279849 None:intergenic
TCAATATCGGAATCATCAGA+AGG 0.635062 1.3:+78276755 None:intergenic
TTAGGTGCAAATGACGAAGG+TGG 0.636052 1.3:+78282684 None:intergenic
CCAGATGATTGAAAAGATGG+TGG 0.645944 1.3:+78282720 None:intergenic
TAGGATGACTCTTACTGCGA+GGG 0.647232 1.3:-78276567 MS.gene037392:CDS
TCCCAAACAACCGTTAGTCG+AGG 0.649684 1.3:-78279684 MS.gene037392:CDS
TGAGAATGGTAGTATTGATG+TGG 0.651173 1.3:-78279990 MS.gene037392:CDS
TTTCATCACCTGCTCCAGAA+CGG 0.653042 1.3:+78282427 None:intergenic
GTTAAGCCCAATAATCAACC+TGG 0.653811 1.3:-78282855 MS.gene037392:CDS
CAAAAGAATAACATGACATG+CGG 0.657977 1.3:+78276185 None:intergenic
GAAATAACAGAGTCATCAGG+TGG 0.658456 1.3:+78277094 None:intergenic
TTTCCAAGCATCAAAGATGG+AGG 0.662100 1.3:+78282492 None:intergenic
TGAATCTCTATTGCCTTCGG+GGG 0.663579 1.3:+78276781 None:intergenic
GCGGGTGATCACAAGCCTGA+CGG 0.667422 1.3:+78278014 None:intergenic
AACTTGACTGCAGAACCTCA+AGG 0.667843 1.3:+78276834 None:intergenic
CAAACAACCGTTAGTCGAGG+AGG 0.667934 1.3:-78279681 MS.gene037392:CDS
TTTGGCGAAGACCATGCTGG+CGG 0.671173 1.3:-78275303 MS.gene037392:CDS
TCATTGTAAAGAACAACTTG+GGG 0.686210 1.3:-78276996 MS.gene037392:CDS
TTATTAGGTGCAAATGACGA+AGG 0.688311 1.3:+78282681 None:intergenic
GTAGGATGACTCTTACTGCG+AGG 0.690531 1.3:-78276568 MS.gene037392:CDS
TGAACTTGCAAAATATGATG+TGG 0.692648 1.3:-78279741 MS.gene037392:CDS
GTTCAACACAGGCCCCAGGT+AGG 0.695205 1.3:-78279904 MS.gene037392:CDS
AGGTGATTGTAGATCCTGGG+AGG 0.700899 1.3:-78283056 MS.gene037392:CDS
TCACTAGAACTAGCAAACGG+TGG 0.718383 1.3:+78282459 None:intergenic
TGAACCGAGTAGTTCAACAC+AGG 0.722104 1.3:-78279915 MS.gene037392:CDS
TACCACCAAGATCGTCACAG+AGG 0.755206 1.3:+78276936 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 78275251 78283376 78275251 ID=MS.gene037392
chr1.3 mRNA 78275251 78283376 78275251 ID=MS.gene037392.t1;Parent=MS.gene037392
chr1.3 exon 78283275 78283376 78283275 ID=MS.gene037392.t1.exon1;Parent=MS.gene037392.t1
chr1.3 CDS 78283275 78283376 78283275 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78283019 78283190 78283019 ID=MS.gene037392.t1.exon2;Parent=MS.gene037392.t1
chr1.3 CDS 78283019 78283190 78283019 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78282380 78282936 78282380 ID=MS.gene037392.t1.exon3;Parent=MS.gene037392.t1
chr1.3 CDS 78282380 78282936 78282380 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78280406 78280477 78280406 ID=MS.gene037392.t1.exon4;Parent=MS.gene037392.t1
chr1.3 CDS 78280406 78280477 78280406 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78280225 78280302 78280225 ID=MS.gene037392.t1.exon5;Parent=MS.gene037392.t1
chr1.3 CDS 78280225 78280302 78280225 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78279228 78280134 78279228 ID=MS.gene037392.t1.exon6;Parent=MS.gene037392.t1
chr1.3 CDS 78279228 78280134 78279228 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78278314 78278444 78278314 ID=MS.gene037392.t1.exon7;Parent=MS.gene037392.t1
chr1.3 CDS 78278314 78278444 78278314 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78277880 78278101 78277880 ID=MS.gene037392.t1.exon8;Parent=MS.gene037392.t1
chr1.3 CDS 78277880 78278101 78277880 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78276532 78277119 78276532 ID=MS.gene037392.t1.exon9;Parent=MS.gene037392.t1
chr1.3 CDS 78276532 78277119 78276532 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78276053 78276262 78276053 ID=MS.gene037392.t1.exon10;Parent=MS.gene037392.t1
chr1.3 CDS 78276053 78276262 78276053 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
chr1.3 exon 78275251 78275355 78275251 ID=MS.gene037392.t1.exon11;Parent=MS.gene037392.t1
chr1.3 CDS 78275251 78275355 78275251 ID=cds.MS.gene037392.t1;Parent=MS.gene037392.t1
Gene Sequence

>MS.gene037392

ATGCTTGATAATGTGGACAATATTATCGACTCAACTTGGAGACTATGTGCTCTTGTAGGTGGTTGGGTTTCTGGTTTAATTTCAAAACCTTACACAAAAGTGGTGAGTTACACCATTTTCATTTAGCGAAGGTTTTCGTTTTAATGTCATGTGTAACAAGATGTTCATGATACTTTTTGACTACAGGTTGGCTCTGCATTTGATGGTTCTATTTCTAGGTTGGGCAACGAAAGGGAAAATAGTTATCTAGATTACATGGATCAGTGTATATATATTAGTTCGTCGGACGATGAGTTGGAGGTGATTGTAGATCCTGGGAGGATTCTTCCAAGATGGGCTGCTTCTGAAAGGAATTCAGGTGGAAGATTTTTATCGAAGATATCCTGTAATGAAATTTCTTTATAAATCAGTAATCATCATATATGTTATATTATGTACAGATTCAAGAAGGGCAAAAAGTTCAAACGCGAGCTCGTCTAACGTTTTTAATCATTCACAAGTTAAGCCCAATAATCAACCTGGTCCGAGCAATGGAAGCACAAGTCAGCATCAGACAGTAAATTCCCGAATTTCTAATTCCAATGGTGCCGGTTATGAGAATATGTCATCTCAACAAGCTTTTAACAGGACCCTTCCACCATCTTTTCAATCATCTGGTACAAGGGCTCTTCCACCTTCGTCATTTGCACCTAATAACAGATTAAATAACTTAAGCAGCAGTCAGCTGCATGATGCATACAAGAATCGTCATCATGGAGTAGGACCTAGCACATCTGGTGAGAAGGGCTTTTTTCGTGACAATTTTGGCAGAGGCAATGATGGAGATCGTTTCACGAATCAGAATGGTGGGATCAGGGCTCTTCCTCCATCTTTGATGCTTGGAAAGGCTATAACTCCACCGTTTGCTAGTTCTAGTGAATCTGCGTACCGTTCTGGAGCAGGTGATGAAAGGGCTCCTGAAACTGATGAGAGACTAATTTATGAAGCAGCATTACAGGTATTTCATTATGTTTGTCACCGTATTTACATGCTTACTCAAAGTTGTATGAAAGAATATTCTGTTTGTTAGGTTTTAGTGGCAATCATTTAGTTGAAAAGACCATTTCAAATCTCTTTTTTTGAGAGGAGGATAATTTAATCTCTTAATAAAAAACATTTCCTTAATTGTGAATCATATATGCGAAGCTTCTTTTGTTATATGTGAAATATTGTTAAAGTTGACTCCTTTAGAAACCTGTGATAGTTGGGTAGGTTTAAGATGTAGTGCATGTGGATATTTGGGTGAACTCATTCGCTTTTTGTTTCTTCTTAGTTTTTGGTGTACCTCTTTTTTCTTTCTTAGAAGGTTTTGAACTCCTTTTTTTTTTATTAAGCTTGAACTCCTTTACATGCTAGACATGATACTCATACACATGCCCATCAGTTATTAAAATTGTTTTTATCAGAGGATGTTGAAACTATTTTTCGATCTCCGTTGCCATGTCAGAAAATATTGTTTTTTTTTAGCAGGGCTATCTAGCTTGTGCAATACCTTCTAGCTGCTGCTAGTAGGTTCTCTATTAGTTACTTCGGTTAGTTGATTCTGTTATAGTTAGTTGTAACTAACTGATTGTAATGTCGTTAGCATGCTTACTTTATACATTTGTCCTCTATAAAGAGCACTGCCGTATCTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTATTACTACTACTACTACTACGTATTATTATTATTATTATTATTATTATTATCACGCACACACACAGACACTCGCGCGTGCACACACACACATACATATATTTATATATTTATATTGCATTAATGTCTGTGATACAGGACAGTAGAAACATATGACATTAATGTTTGTGAACATGTGATTTAGGGGAATTCCTGTTAATACTGAAACCATAAGGGAAACTTGGACATGCTTCAAAAAGTACAAAAGCGAATAACACCTATCTCAACTACAACAATTCTAGCCCATGAAACACAAATGGCACAAAAATACCTCTAGGATTGAAAATACAAAACTAAATTATCATAACACCCATTTAAAATAGTAATTGTAGATGACAGTAATCTGCCAAGTGTATGGGATAATAATACAACGAGTTAGCACCACAAAAAAACTTAATAAATGATGTTGAGATGATTTGACGTTTAATCTTATGCTTTATTGTTGTTTCTTCTGCATCAATATGATATGTGGAAGACGCTTCAAACATTAAATTCTCAGTTTGTCACATAGTTGTCAAAGCGGAAACGCGGCGTGGCGCGGCCACCCCAAAAATTGACGCGGCGCGGTAAGCGGGCGCGACGCGGGCGCTTTTACATGACGCGGGCACTAAAACTAAATATTATATTATTAATTAAGGACTAAAAAAGTATGAAAAAAATATATTTAGTATTAATATAGATGAGAAAATTTTATTTTGCATTCACATTTAGACTTCATCTTGATCATATTAATTCCTAGATCTCTAGATCGTCTTCATCTTGATCATATTAATTCCTAGATCTCTAGATCTCTAATCAATCTTTCACTTCTTCCCTTTCTTCTTCATTTTGACTGTAAAAAAAAGGATGATTAACAGAGAACAGAGATGAGATTTTGTGGTTTCTGATGAGATTTTTTGTTGACCCGCTTTTTGCCCGCGTTGACCCGCTTTTTGCTCGCGTTGAGCCGCTTTTGCCTAACGCGCGACTCGGTCGCGTTCTGACGCGCTAGGCTGTTTTCAGCCGCTCCGCGCCGCGATCGCGCCGCGTTAGACCGCTATTGACAACAGAGGTTTGTCATATATTAATCTTTATTATCATCGAGAGTTATTGGGACACAATGTCAGTGGTGAATTTGGTTGTTGCAGGATATCAGTCAACCATTAAAAGAAGCTGATTTACCTGCTGGTATAATGTCTGTACCTCTAATGAGACATCAGGTATTGCGGCCTATCTATCATAACTGCTCTTATTATTTATTATTATTATTATTATTATTATTATTATTTTGGATATTTTATTTGTTATCGCCTTATATTCCAGAAAATTGCACTGGCTTGGATGCTTCAGAGGGAAAACAGGAGTTTGCATTGCTTGGGGGGGATTTTGGCTGATGATCAGGTTATTTTTGAATCATCATTTTTTAATGACAAGCACTTGATATTTAACTGTGAGCATTTTTATCTCAACTTTATAACCTTGTTCAAACAGGGTCTTGGAAAGACAATTTCAACGATTGCTCTCATCCTAATGCAAAGGCAATCACAGATAAAATGGAAAACAGATGATCCACGCAACCATAAAGCTGAAGCCTTGAATTTGGATGATGATGATGAGAATGGTAGTATTGATGTGGAAAAGGAAAAGCTTAAAAATGATGAAGAATCCAATGATGCAAAACCTATTACTGAACCGAGTAGTTCAACACAGGCCCCAGGTAGGAAAAGGCCAGCTGCTGGTACACTGGTTGTCTGCCCTGCAAGTGTTCTTCGGCAGTGGGCTAGAGAGCTTGATGAGAAAGTTGGAGATGAAAAGCTTTCTGTTTTGATTTTTCATGGGGGCAGTAGGACAAAGGATCCTGTTGAACTTGCAAAATATGATGTGGTTCTCACAACATACTCTCTTGTGACTAATGAAGTTCCCAAACAACCGTTAGTCGAGGAGGATGATATTGATGAAAAAGACGGGGAAAAGTTTGGCTTATCCTCCGATTTTTCTGGCAATAAAAAGAGGAAAAAGCTATATAATGGAAGTAAGAAGGGTAAAAAAGGTAGGAAGGGATTAGATGGCTCTTCTTTCGATTGCGGTGGCGCTCTTGCAAAAGTAGGTTGGTTTAGGGTTATTCTAGATGAAGCTCAAACGATAAAGAATCATAGGACTCAGATGGCCAGAGCTTGCTCCAGCCTTAGGGCAAAAAGAAGGTGGTGCTTGTCTGGCACGCCTATTCAGAATACCATTGATGATTTATATAGCTACTTTAGGTTCCTGAAGTATGATCCTTATGCTGTGTATAAATCATTCTACAATACAATAAAAGTCCCAATATCCAGAAATTCTATTCAAGGTTACAAAAAACTTCAAGCAGTTTTGAGGGCCATAATGCTACGTCGTACAAAAGGTGATTTTTTCTTTTTTCATAATCTGGCTGCTAAGTCTTGATTGGATAGATTGTATGAATTTATCGTTTTCCTGGCTTGATTTAGGTTTTAAGTGTCATTGCAATATTGTTGCTGATCTCCTCTTTAGTTAAAGTTCATGACTTAGATAATTTTTCATCGATTCTTTTTCTCATTTCCTTCTCTACCTTTGGTACCACCACAGTAGTATCAGCACACGTTCATTCTTGTACAGGACAACGTCGTCCAGTTGTAATGATGTCAAGTCTTAAGTGAGTATGAAAAGCGAGTCACTGGTGATCCTGGAAAGAATTCTTGCCATGCAAGCCACCTTCCATAATTTTGATAAGTTTAGCTGAGGGTTTTGTAGTGGTGTCGACACCAAGTATTTATTTGGTGTTAATTTCATGTCGTTTGTTCTTCCCTCCCTGAAATTCCCATCAGAATGCTAGACATATTTATTTATTTTGTTACATTCTCGATTTATTAAATTTTCAGTTTTTTGACTAAATTTTCTTGTTTTTGAATGATGGAATTATTTCTTCTATTCAGTGAACTCATCCTTGATTTCTTTTTTAACGAATCTATGGCCATCGTGTATAATAATGAATTTGGGATTGTTTTACCATAAAGAAATATAATATTGTTTGGCTGAGGGAGTGGACATCATCAAGGTACTGGTTAGAGTGAGCCTGATTTTCTTTGAAGTTGGTGTCATATTTACTGTATGGGGGTGATTATTGGTCTATTCTGTTTTTTCATATTAAATTATTTTATTTGTCTAGGAACTTTGCTTGATGGCAAGCCTATAATCACTTTGCCTCCTAAAACAATTAATCTGGAGAAGGTTGATTTCTCCTATGAGGAGCGGGCCTTCTACAAGAAGTTGGAAGCTGATTCACGTTCTCAATTTAAGGTTTATTTCCTTTTATATTGCTTATCTTAACTTGGTTGGACATAATGTAATGATACTGTTTGTTTTCCCTTCAAAATTAGTGTCTAGAAATTTGTTTTGATATTGGGTCAAGTCAATTGCAAATTATATGACATTGTTGTTCATCTGATATTTCTATGCTGATGGATGTGTTCCAAATTTGTAGTTCTGAAATGAATGCTTGTACTTTGCAGGCATATGCAGCTGCTGGCACAGTAAATCAAAACTACGCAAATATTCTTTTAATGCTTTTACGTCTCCGTCAGGCTTGTGATCACCCGCTTCTTGTTAAAGAATATAATTCTGATCCTGTTGGGAAAGATTCTGTTGAAATGGCAAAAAAGCTTCCAAAGGAGATGCTGATCAACCTGTTTAATAGTCTGGAAACAACTTCAGCTATATGCTGTGTCTGCAATGTGAGTTAATTTTGATATGATAATTTCATTATTGGTTTCCTTTGTTGCAATTGTGCCTCCTTAAAACATCCGGTATAGATCCTTTTGATTGCATATCTTACAAGTCTTACTCTTCCTATGGTACATGTTATGTTATTTGTCTAATGAATGATATCAGGAGGTACACTTCTCGATGGTTTGATATATGATTAAGTCTGTTAACAGATGTTTCTAAGCATATGTTTACTCTGGGCATGTTTTAGGAGCGTCACATTATTAGTCTTTTTGGAACACTATAAATACACTTTGTTCACAAAATCAGGCAAAGTTTAACACTTAAAACCTTCATTGTAAGAAAGTCATGGATTATGATGGAAACAAGTCAAAGTTAAGGAGTTCTAGTTGTTAGTTGTGGCAAAATAAAATCCACATCATCATAAAGTAGTTATAGGATATATTTTAGGGGGGATGCATTCCATGGGTATTTTATGTAGCACAATCCAAAACTACCAGGTAGCAGGTGATGTGATTTAATAATTGTTGTTTGAAAAAGGAAGTTTATTCAGATGAAGATAAAGGATTTCAAGGGGGGCTGATCATCTTAATTGAGACCCTGATTTATCAATTTGTTGATTGATTACTGAACTTGTGTTTTTATTATAATTTTCTACCTGAATGTCTGGAATTTTATTTCTCTGTTAACCTGTTATTGCCGAGTGGTAAACAGTAGCTATGCATTGTCATTAAGGGCTCTGGCTGATTTATACTATGGTTTCAACAGGATCCACCTGATGACTCTGTTATTTCGATGTGTGGCCATGTCTTCTGTTATCAATGCGTGTCAGAACATTTGACAAGTGATGATAATATGTGCCCTGCAGTTCATTGTAAAGAACAACTTGGGGAAGATCTTGTTTTCTCCAAAGCAACTTTGAGGAGTTGCCTCTGTGACGATCTTGGTGGTAGTAGTTCTAGCAACTCGAGTCTTGTTGATTATTCCCTAGTACAGAACAGTGAGTACAGCTCATCTAAAATCAAAGCTGTCCTTGAGGTTCTGCAGTCAAGTTGTAAATTGAAGACTCCTGGCTTACTGAATACCCCCGAAGGCAATAGAGATTCACTGCCTTCTGATGATTCCGATATTGAAGATTTTGATTCAGATGTCAAGGTTACAAAACACACAAGTAAATATTCAGAGTGCACATCTGGAGGACCACTAAAGGCTATAATTTTTTCTCAGTGGACTAGCATGTTGGACTTGGTCGAGACATCAATGGAGCAATCTGGCGTCAAATACAGGAGACTTGATGGTAGGATGACTCTTACTGCGAGGGACAGAGCTGTTAAGGATTTCAATACTGATCCTGAGGTTTGGCCATCCCCAATATTGTTAAAGCTGTAACTTCTTTTTATTCAAATCTATAAATGACACCAAGAAATGTGATGTAAGAACCTGTTTGTTAGTAGCTGAAGTACACCGAGAAGTTAAATCTGCTTTTTTCATTACGTCAATAACCCTGAGTGCACTGCTAATCAGTATAATTAAACTAATACCAGAAATTGGATTATTACTGTGATTCAAATGTGTAAACCTAGATTTTCTTTGTTGGCTGACTCACTTGATTTTTTTCTTTTCAGATTACTGTTATGCTGATGTCACTAAAAGCAGGAAACCTTGGTTTAAATATGGTTGCCGCATGTCATGTTATTCTTTTGGACCTTTGGTGGAATCCAACTACTGAAGATCAAGCTATTGATCGAGCTCATAGAATTGGACAGACTCGTCCTGTTACTGTGACACGGATCACCATAAAAGATACAGTTGAAGATAGAATATTGGCTCTACAGGTTTAATATCTATCAGTTTAATTTTTATTTCATGTGGCAATATGAGGTTATACTTTGTAGAAAAATTGAATTTAGAGTCCCCAGTAATTCGGCTTAGAAGCGAGTGGGGGGAATTGAGGTGATTTGTGAGTTTGGAATTGTTTTTTAGTTCATCTTTTGTTTTTCCCTTTCTTTTTCTATCATTGCTGACGGGCCGGGGGGAATCTTGGCGCAATGGGTTAGAGTTGTCGCCATGTGACTAGGATGGTCATGGGTTCAAGTCGTGGGATTGTTTGCCTACAGTAGATTGACAATACCATGTAACTTTCCGAGCTCCGTCATGAGGGGATTCTTTTCTTTTCCTTTTCTCATTATTGCTTTCCTTTTAAATTTATAAACGAAAACTATATAAGTTGAAAGATGACTTTTTTTTGGCATTCTTTTCAAGGGTTTAGGAGATCAAGTCATGTTCTTCCATGGTCCAATGGGCATTGATCTCATAAAAATCCTTAGCCACTTTAATTGGCAGGGGTGCTTCCTCCAAACGATACAGGAAGAGTTATCATATACAGTGTTTTTTCTTGCTTTTATGGGTTTAGTGAGCTTTGCAATCTCCGGGGAACTTTTAATTTCAATGGATAGTAATAGTATACACTTATGTATGTGTTGAGCACTGATAGATTCTGATGTTATTTTTGTGTTGGCCTGTATCCGGCAGGAAGAAAAGAGAAAAATGGTGGCATCTGCATTTGGCGAAGACCATGCTGGCGGTTCTGGAACTCGGCTTACTGTTGATGATCTGAAATATCTTTTCATGGTTTAG
Protein sequence

>MS.gene037392.t1

MLDNVDNIIDSTWRLCALVGGWVSGLISKPYTKVVGSAFDGSISRLGNERENSYLDYMDQCIYISSSDDELEVIVDPGRILPRWAASERNSDSRRAKSSNASSSNVFNHSQVKPNNQPGPSNGSTSQHQTVNSRISNSNGAGYENMSSQQAFNRTLPPSFQSSGTRALPPSSFAPNNRLNNLSSSQLHDAYKNRHHGVGPSTSGEKGFFRDNFGRGNDGDRFTNQNGGIRALPPSLMLGKAITPPFASSSESAYRSGAGDERAPETDERLIYEAALQDISQPLKEADLPAGIMSVPLMRHQKIALAWMLQRENRSLHCLGGILADDQGLGKTISTIALILMQRQSQIKWKTDDPRNHKAEALNLDDDDENGSIDVEKEKLKNDEESNDAKPITEPSSSTQAPGRKRPAAGTLVVCPASVLRQWARELDEKVGDEKLSVLIFHGGSRTKDPVELAKYDVVLTTYSLVTNEVPKQPLVEEDDIDEKDGEKFGLSSDFSGNKKRKKLYNGSKKGKKGRKGLDGSSFDCGGALAKVGWFRVILDEAQTIKNHRTQMARACSSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLLDGKPIITLPPKTINLEKVDFSYEERAFYKKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAICCVCNDPPDDSVISMCGHVFCYQCVSEHLTSDDNMCPAVHCKEQLGEDLVFSKATLRSCLCDDLGGSSSSNSSLVDYSLVQNSEYSSSKIKAVLEVLQSSCKLKTPGLLNTPEGNRDSLPSDDSDIEDFDSDVKVTKHTSKYSECTSGGPLKAIIFSQWTSMLDLVETSMEQSGVKYRRLDGRMTLTARDRAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDHAGGSGTRLTVDDLKYLFMV