Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019291.t1 | KEH24588.1 | 92.4 | 728 | 49 | 1 | 4 | 731 | 8 | 729 | 0.00E+00 | 1178.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019291.t1 | P92948 | 74.3 | 727 | 176 | 4 | 4 | 727 | 8 | 726 | 1.4e-274 | 946.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019291.t1 | A0A072U615 | 92.4 | 728 | 49 | 1 | 4 | 731 | 8 | 729 | 0.0e+00 | 1178.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene019291.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019291.t1 | MTR_7g115550 | 95.034 | 725 | 30 | 1 | 4 | 728 | 8 | 726 | 0.0 | 1335 |
| MS.gene019291.t1 | MTR_7g115550 | 94.918 | 728 | 31 | 1 | 4 | 731 | 8 | 729 | 0.0 | 1330 |
| MS.gene019291.t1 | MTR_5g010470 | 88.033 | 727 | 36 | 4 | 4 | 730 | 8 | 683 | 0.0 | 1192 |
| MS.gene019291.t1 | MTR_7g061330 | 36.364 | 110 | 64 | 2 | 4 | 112 | 62 | 166 | 8.10e-13 | 72.0 |
| MS.gene019291.t1 | MTR_7g461410 | 36.364 | 110 | 64 | 2 | 4 | 112 | 62 | 166 | 8.10e-13 | 72.0 |
| MS.gene019291.t1 | MTR_7g061330 | 36.364 | 110 | 64 | 2 | 4 | 112 | 26 | 130 | 1.04e-12 | 71.6 |
| MS.gene019291.t1 | MTR_3g110028 | 38.462 | 78 | 48 | 0 | 4 | 81 | 86 | 163 | 2.04e-11 | 68.2 |
| MS.gene019291.t1 | MTR_6g027340 | 40.789 | 76 | 45 | 0 | 6 | 81 | 19 | 94 | 2.51e-11 | 64.3 |
| MS.gene019291.t1 | MTR_6g027360 | 40.741 | 81 | 48 | 0 | 1 | 81 | 76 | 156 | 3.63e-11 | 65.5 |
| MS.gene019291.t1 | MTR_8g468380 | 32.353 | 102 | 64 | 1 | 3 | 104 | 22 | 118 | 3.98e-11 | 66.2 |
| MS.gene019291.t1 | MTR_7g451170 | 38.750 | 80 | 49 | 0 | 4 | 83 | 192 | 271 | 5.36e-11 | 65.9 |
| MS.gene019291.t1 | MTR_1g026870 | 32.727 | 110 | 68 | 2 | 4 | 112 | 34 | 138 | 8.98e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019291.t1 | AT1G09770 | 76.204 | 727 | 162 | 4 | 4 | 727 | 8 | 726 | 0.0 | 1069 |
| MS.gene019291.t1 | AT3G18100 | 35.294 | 102 | 59 | 2 | 4 | 104 | 547 | 642 | 1.97e-13 | 74.7 |
| MS.gene019291.t1 | AT3G18100 | 34.653 | 101 | 61 | 2 | 6 | 106 | 498 | 593 | 3.14e-11 | 67.4 |
| MS.gene019291.t1 | AT3G18100 | 35.294 | 102 | 59 | 2 | 4 | 104 | 499 | 594 | 3.17e-13 | 73.9 |
| MS.gene019291.t1 | AT3G18100 | 34.653 | 101 | 61 | 2 | 6 | 106 | 450 | 545 | 6.01e-11 | 66.6 |
| MS.gene019291.t1 | AT3G18100 | 35.294 | 102 | 59 | 2 | 4 | 104 | 386 | 481 | 4.14e-13 | 73.2 |
| MS.gene019291.t1 | AT3G18100 | 34.653 | 101 | 61 | 2 | 6 | 106 | 337 | 432 | 8.33e-11 | 65.9 |
| MS.gene019291.t1 | AT5G02320 | 34.862 | 109 | 67 | 1 | 4 | 112 | 16 | 120 | 4.93e-13 | 72.8 |
| MS.gene019291.t1 | AT5G02320 | 34.862 | 109 | 67 | 1 | 4 | 112 | 76 | 180 | 4.95e-13 | 72.8 |
| MS.gene019291.t1 | AT5G02320 | 34.862 | 109 | 67 | 1 | 4 | 112 | 76 | 180 | 4.95e-13 | 72.8 |
| MS.gene019291.t1 | AT3G18100 | 35.294 | 102 | 59 | 2 | 4 | 104 | 334 | 429 | 5.53e-13 | 72.8 |
| MS.gene019291.t1 | AT5G11510 | 35.455 | 110 | 65 | 2 | 4 | 112 | 30 | 134 | 4.59e-12 | 70.1 |
| MS.gene019291.t1 | AT5G11510 | 35.455 | 110 | 65 | 2 | 4 | 112 | 30 | 134 | 4.59e-12 | 70.1 |
| MS.gene019291.t1 | AT5G11510 | 35.455 | 110 | 65 | 2 | 4 | 112 | 30 | 134 | 4.59e-12 | 70.1 |
| MS.gene019291.t1 | AT5G11510 | 35.455 | 110 | 65 | 2 | 4 | 112 | 30 | 134 | 9.57e-12 | 68.9 |
| MS.gene019291.t1 | AT5G11510 | 35.455 | 110 | 65 | 2 | 4 | 112 | 30 | 134 | 1.13e-11 | 68.9 |
| MS.gene019291.t1 | AT4G18770 | 38.889 | 90 | 50 | 1 | 4 | 93 | 218 | 302 | 1.57e-11 | 67.4 |
| MS.gene019291.t1 | AT3G09370 | 34.545 | 110 | 66 | 2 | 4 | 112 | 84 | 188 | 1.90e-11 | 67.8 |
| MS.gene019291.t1 | AT3G09370 | 34.545 | 110 | 66 | 2 | 4 | 112 | 79 | 183 | 1.93e-11 | 67.8 |
| MS.gene019291.t1 | AT4G33450 | 38.462 | 78 | 48 | 0 | 4 | 81 | 20 | 97 | 2.09e-11 | 65.5 |
| MS.gene019291.t1 | AT3G09370 | 34.545 | 110 | 66 | 2 | 4 | 112 | 92 | 196 | 2.54e-11 | 67.4 |
| MS.gene019291.t1 | AT5G40360 | 37.179 | 78 | 49 | 0 | 4 | 81 | 159 | 236 | 9.28e-11 | 64.7 |
| MS.gene019291.t1 | AT5G17800 | 40.000 | 80 | 48 | 0 | 2 | 81 | 92 | 171 | 9.76e-11 | 64.3 |
Find 210 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTCTTTCTAACTGTTTC+TGG | 0.008572 | 5.4:+4791180 | None:intergenic |
| TTCTGGGTCATTCAGCTTCT+TGG | 0.153986 | 5.4:+4791197 | None:intergenic |
| TGCCGGCGCCATACCACTTC+TGG | 0.177175 | 5.4:+4790765 | None:intergenic |
| ATTTCATAACAGCAGCTTTC+AGG | 0.225007 | 5.4:+4792003 | None:intergenic |
| CAGCATCTCTGGAGCTTATT+AGG | 0.228626 | 5.4:-4790396 | MS.gene019291:CDS |
| GGAGTAAGGCCTGCACTTCC+AGG | 0.240853 | 5.4:+4790787 | None:intergenic |
| TTGGGTGTCTGTGGATAATT+AGG | 0.241982 | 5.4:+4791027 | None:intergenic |
| CATGATGGAAGCTGAAAATT+TGG | 0.248037 | 5.4:-4790944 | MS.gene019291:CDS |
| GTTCTCTGAGGAGTTCTTAA+AGG | 0.283026 | 5.4:+4790991 | None:intergenic |
| AAAGCTGCTGTTATGAAATA+TGG | 0.287568 | 5.4:-4791999 | MS.gene019291:CDS |
| GAATTGGTTGCATCACTATC+TGG | 0.302904 | 5.4:+4790566 | None:intergenic |
| GGTCGTGCAGGCTTCGATTC+AGG | 0.305523 | 5.4:+4791645 | None:intergenic |
| AAAGGAGCTTCTAGCCTTAC+TGG | 0.309592 | 5.4:-4790293 | MS.gene019291:CDS |
| AGTCCACTCAGTCTTCTTAA+TGG | 0.314486 | 5.4:+4791887 | None:intergenic |
| CCCTGTCATAGAAGATTATC+AGG | 0.315605 | 5.4:-4790182 | MS.gene019291:CDS |
| CCATTGCCTCACGAAGATAC+TGG | 0.317289 | 5.4:+4789457 | None:intergenic |
| TGGGGTCACTCCTAAGAAAA+AGG | 0.319124 | 5.4:-4790851 | MS.gene019291:CDS |
| TCTTCAGCATCTTCTTGAAT+TGG | 0.331097 | 5.4:+4790550 | None:intergenic |
| GTTTGAGAAGAGGCCTCCTC+TGG | 0.334561 | 5.4:-4791394 | MS.gene019291:CDS |
| ATCTCTTTCTAACTGTTTCT+GGG | 0.335857 | 5.4:+4791181 | None:intergenic |
| ATCTCGTCGGCTTGCTCAAT+AGG | 0.342238 | 5.4:+4790322 | None:intergenic |
| TCAAGTTCTTCTATAGTAGT+AGG | 0.344179 | 5.4:+4791321 | None:intergenic |
| CTCCGAAGGGAACTCCTCTC+AGG | 0.358383 | 5.4:-4790717 | MS.gene019291:CDS |
| TAGGCCTCCTCCAGCATCTC+TGG | 0.367513 | 5.4:-4790407 | MS.gene019291:CDS |
| GCGTGAGGAGATAGCAAATA+AGG | 0.368961 | 5.4:-4790248 | MS.gene019291:CDS |
| CCAAAATGAGCATAGGTGTT+TGG | 0.385146 | 5.4:-4792046 | None:intergenic |
| GCAGGCTTCGATTCAGGATT+CGG | 0.385997 | 5.4:+4791651 | None:intergenic |
| TCTCGTCGGCTTGCTCAATA+GGG | 0.387795 | 5.4:+4790323 | None:intergenic |
| AGGCCCATTTGCTGCTCGTT+TGG | 0.388358 | 5.4:+4790210 | None:intergenic |
| TCAGATTTCCGATCAAGAAT+TGG | 0.389053 | 5.4:-4791136 | MS.gene019291:CDS |
| CCTTGACGCCGCTTGTGTTA+AGG | 0.393639 | 5.4:-4791730 | MS.gene019291:CDS |
| AGGCTGCTGGGATTGATATA+AGG | 0.409355 | 5.4:-4791464 | MS.gene019291:CDS |
| TCTGCAACCCCTGGAAGTGC+AGG | 0.411721 | 5.4:-4790796 | MS.gene019291:CDS |
| AGAGATGCTGGAGGAGGCCT+AGG | 0.415805 | 5.4:+4790409 | None:intergenic |
| TATGGTCTATCAAGTGTTGC+TGG | 0.416170 | 5.4:-4789348 | MS.gene019291:CDS |
| GCCGGCGCCATACCACTTCT+GGG | 0.416494 | 5.4:+4790766 | None:intergenic |
| GGATCCAAACGAGCAGCAAA+TGG | 0.417377 | 5.4:-4790214 | MS.gene019291:CDS |
| AAAGGAGTCATGGCTTGGTT+GGG | 0.420072 | 5.4:+4791009 | None:intergenic |
| GCTACATATCAATGAAGATA+TGG | 0.420115 | 5.4:-4790689 | MS.gene019291:CDS |
| ACCCACAATGGTAGCACTAA+TGG | 0.421586 | 5.4:+4791791 | None:intergenic |
| TAAGGCAGCGGAGGAGGAAA+AGG | 0.424744 | 5.4:-4791446 | MS.gene019291:CDS |
| TTGGATGAAATTGCCAAGTT+GGG | 0.429250 | 5.4:-4791117 | MS.gene019291:CDS |
| ACGACCCGATCCTGTTGATA+TGG | 0.431516 | 5.4:-4791628 | MS.gene019291:CDS |
| AGCTTTCAGGATTTCATCCT+CGG | 0.436489 | 5.4:+4792016 | None:intergenic |
| CAGTATCTTCGTGAGGCAAT+GGG | 0.437430 | 5.4:-4789456 | MS.gene019291:CDS |
| TTTGATACCCGCAACACATA+TGG | 0.438271 | 5.4:-4789366 | MS.gene019291:CDS |
| TGATAGACCATATGTGTTGC+GGG | 0.443197 | 5.4:+4789359 | None:intergenic |
| ATTGGATGAAATTGCCAAGT+TGG | 0.444138 | 5.4:-4791118 | MS.gene019291:CDS |
| AAGAACTTGAGGGGAAAAGA+AGG | 0.444403 | 5.4:-4791308 | MS.gene019291:CDS |
| GCAAATAAGGAGAGAGAGAA+AGG | 0.446065 | 5.4:-4790235 | MS.gene019291:CDS |
| ACTAATGGTTCTCCAACTAA+TGG | 0.446782 | 5.4:+4791806 | None:intergenic |
| CTAATAAGCTCCAGAGATGC+TGG | 0.447893 | 5.4:+4790397 | None:intergenic |
| CCATACCACTTCTGGGAGTA+AGG | 0.448683 | 5.4:+4790773 | None:intergenic |
| ATCCTCTTCAATCTTCTCCT+CGG | 0.449369 | 5.4:+4790525 | None:intergenic |
| GAGGGAGTCAGCAGTGGGAT+TGG | 0.449422 | 5.4:+4790817 | None:intergenic |
| AAGAGAGAATTGAAGGCTGC+TGG | 0.451049 | 5.4:-4791477 | MS.gene019291:CDS |
| TCCTGATAATCTTCTATGAC+AGG | 0.451422 | 5.4:+4790181 | None:intergenic |
| TCATACTCATCCATATCAAC+AGG | 0.454291 | 5.4:+4791618 | None:intergenic |
| TCCCCTGGACGCAATTTCCT+AGG | 0.458724 | 5.4:+4791681 | None:intergenic |
| CAGAAATTCCGTTTGAGAAG+AGG | 0.469889 | 5.4:-4791404 | MS.gene019291:CDS |
| TGCAGAGAGGCAAGATGCCC+CGG | 0.470266 | 5.4:-4791235 | MS.gene019291:CDS |
| TAAAGGAGTCATGGCTTGGT+TGG | 0.470630 | 5.4:+4791008 | None:intergenic |
| GAGTCTCAGACACCACTGTT+AGG | 0.471291 | 5.4:-4790910 | MS.gene019291:CDS |
| CTGAAAATTTGGCCAGGCTG+AGG | 0.471566 | 5.4:-4790933 | MS.gene019291:CDS |
| TTCTTAAAGGAGTCATGGCT+TGG | 0.472192 | 5.4:+4791004 | None:intergenic |
| TGGCATGCAGAATAGCAGCC+GGG | 0.473211 | 5.4:+4791217 | None:intergenic |
| TTGATATAAGGCAGCGGAGG+AGG | 0.474103 | 5.4:-4791452 | MS.gene019291:CDS |
| TGATGTTGCTGATGAGGATA+GGG | 0.479449 | 5.4:-4791364 | MS.gene019291:CDS |
| AATTTCATCCAATTCTTGAT+CGG | 0.479560 | 5.4:+4791128 | None:intergenic |
| AATCTGAAGGATGCAACTCC+GGG | 0.484835 | 5.4:+4790878 | None:intergenic |
| CCAGTATCTTCGTGAGGCAA+TGG | 0.484875 | 5.4:-4789457 | MS.gene019291:CDS |
| TGTCTGAGACTCCCTCAGCC+TGG | 0.484905 | 5.4:+4790921 | None:intergenic |
| AACGATCAAAAGTCATTCAA+AGG | 0.485643 | 5.4:-4790438 | MS.gene019291:CDS |
| TCCTCTTCAATCTTCTCCTC+GGG | 0.488427 | 5.4:+4790526 | None:intergenic |
| ACCATTAGTGCTACCATTGT+GGG | 0.490042 | 5.4:-4791792 | MS.gene019291:CDS |
| GAGTAAGGCCTGCACTTCCA+GGG | 0.490905 | 5.4:+4790788 | None:intergenic |
| AGAAGAAGAGGCACGGCAGA+AGG | 0.493242 | 5.4:-4790473 | MS.gene019291:CDS |
| CTCCTTTCTTATCATCTCGT+CGG | 0.493278 | 5.4:+4790309 | None:intergenic |
| TCATTCAAAGGGAACTTCCT+AGG | 0.493709 | 5.4:-4790426 | MS.gene019291:CDS |
| TGCACTTCCAGGGGTTGCAG+AGG | 0.493979 | 5.4:+4790798 | None:intergenic |
| AAATCTGAAGGATGCAACTC+CGG | 0.494050 | 5.4:+4790877 | None:intergenic |
| CTGACTCCCTCTGCAACCCC+TGG | 0.496434 | 5.4:-4790805 | MS.gene019291:CDS |
| TCTTCTATGACAGGGATAGC+AGG | 0.496725 | 5.4:+4790190 | None:intergenic |
| CTCAGTGGAGAACCATTAGT+TGG | 0.497414 | 5.4:-4791818 | MS.gene019291:CDS |
| GTCTCCGTCAGCTCTTATCA+AGG | 0.499862 | 5.4:+4790369 | None:intergenic |
| GAAGTGGTATGGCGCCGGCA+AGG | 0.499877 | 5.4:-4790762 | MS.gene019291:CDS |
| TTCAGAAGCATGTGCTCGGT+TGG | 0.501151 | 5.4:-4791583 | MS.gene019291:CDS |
| GTGAGAAGTAAGCTGGATGA+TGG | 0.502979 | 5.4:-4789282 | MS.gene019291:CDS |
| CTCATCCATATCAACAGGAT+CGG | 0.503902 | 5.4:+4791623 | None:intergenic |
| ATCGCTGCCCACAAGGTCAA+TGG | 0.504621 | 5.4:+4791089 | None:intergenic |
| AAGTAAGCTGGATGATGGGA+AGG | 0.506469 | 5.4:-4789277 | MS.gene019291:CDS |
| ATAGCATCTCCTTTACTAGC+TGG | 0.506651 | 5.4:+4790967 | None:intergenic |
| AGAGGATATGTCTGATAGAA+TGG | 0.507303 | 5.4:-4790509 | MS.gene019291:CDS |
| AGCTCCAGAGATGCTGGAGG+AGG | 0.508047 | 5.4:+4790403 | None:intergenic |
| TGCAGATTTGCAAACGAGTA+GGG | 0.508803 | 5.4:+4791950 | None:intergenic |
| TCCCTGAGAGGAGTTCCCTT+CGG | 0.510495 | 5.4:+4790715 | None:intergenic |
| GATGATTCGACTTGAGAAGA+AGG | 0.511403 | 5.4:-4789250 | MS.gene019291:CDS |
| TGATAGAATGGCTAGAGAAA+AGG | 0.511992 | 5.4:-4790497 | MS.gene019291:CDS |
| TTGGCATGCAGAATAGCAGC+CGG | 0.514383 | 5.4:+4791216 | None:intergenic |
| CAGAGAACACCAGCTAGTAA+AGG | 0.515217 | 5.4:-4790976 | MS.gene019291:CDS |
| ACGAGTAGCACTGCTACCTT+CGG | 0.515674 | 5.4:+4791059 | None:intergenic |
| GTTGCAGAGGGAGTCAGCAG+TGG | 0.516056 | 5.4:+4790811 | None:intergenic |
| AAGTGGTATGGCGCCGGCAA+GGG | 0.516862 | 5.4:-4790761 | MS.gene019291:CDS |
| TGCTTTCAGAAGCATGTGCT+CGG | 0.518933 | 5.4:-4791587 | MS.gene019291:CDS |
| GGTTATGCCATTGACCTTGT+GGG | 0.519574 | 5.4:-4791096 | MS.gene019291:CDS |
| CATTGCCTCACGAAGATACT+GGG | 0.519621 | 5.4:+4789458 | None:intergenic |
| TGGGTGTCTGTGGATAATTA+GGG | 0.519886 | 5.4:+4791028 | None:intergenic |
| TCAACAGGATCGGGTCGTGC+AGG | 0.520300 | 5.4:+4791633 | None:intergenic |
| TTGATGTTGCTGATGAGGAT+AGG | 0.524642 | 5.4:-4791365 | MS.gene019291:CDS |
| TCGGCTTGCTCAATAGGGGT+TGG | 0.524733 | 5.4:+4790328 | None:intergenic |
| TGAAAATTTGGCCAGGCTGA+GGG | 0.525084 | 5.4:-4790932 | MS.gene019291:CDS |
| GACCCTAGGAAATTGCGTCC+AGG | 0.525314 | 5.4:-4791684 | MS.gene019291:CDS |
| CAAGTTCTTCTATAGTAGTA+GGG | 0.528361 | 5.4:+4791322 | None:intergenic |
| AGAGGAGGCCTCTTCTCAAA+CGG | 0.529206 | 5.4:+4791396 | None:intergenic |
| TGAGAATGTGAGAAGTAAGC+TGG | 0.529343 | 5.4:-4789289 | MS.gene019291:CDS |
| GCTTGCTCAATAGGGGTTGG+TGG | 0.531592 | 5.4:+4790331 | None:intergenic |
| CACTCAGTCTTCTTAATGGA+AGG | 0.532258 | 5.4:+4791891 | None:intergenic |
| GCACTTCCAGGGGTTGCAGA+GGG | 0.532965 | 5.4:+4790799 | None:intergenic |
| TCATCCATATCAACAGGATC+GGG | 0.534614 | 5.4:+4791624 | None:intergenic |
| AGCATTGTCATGCTCCAGTA+AGG | 0.535038 | 5.4:+4790279 | None:intergenic |
| ACCCTAGGAAATTGCGTCCA+GGG | 0.536757 | 5.4:-4791683 | MS.gene019291:CDS |
| GATCCAAACGAGCAGCAAAT+GGG | 0.542547 | 5.4:-4790213 | MS.gene019291:CDS |
| TTGCAGATTTGCAAACGAGT+AGG | 0.543492 | 5.4:+4791949 | None:intergenic |
| AAGGACGATAACTATGATCC+TGG | 0.549150 | 5.4:-4791711 | MS.gene019291:CDS |
| AGAGAGAATTGAAGGCTGCT+GGG | 0.549517 | 5.4:-4791476 | MS.gene019291:CDS |
| GGGTTATGCCATTGACCTTG+TGG | 0.550781 | 5.4:-4791097 | MS.gene019291:CDS |
| TGATCGGAAATCTGAGGTGG+TGG | 0.551298 | 5.4:+4791144 | None:intergenic |
| CCTTACTCCCAGAAGTGGTA+TGG | 0.551739 | 5.4:-4790773 | MS.gene019291:CDS |
| AGCCGACGAGATGATAAGAA+AGG | 0.552168 | 5.4:-4790311 | MS.gene019291:CDS |
| GAAAAGAAGGATTGATGTTG+AGG | 0.552508 | 5.4:-4791295 | MS.gene019291:CDS |
| GGTATGGCGCCGGCAAGGGA+TGG | 0.553823 | 5.4:-4790757 | MS.gene019291:CDS |
| AGGAGTTCTTAAAGGAGTCA+TGG | 0.554344 | 5.4:+4790999 | None:intergenic |
| TCCCAGAAGTGGTATGGCGC+CGG | 0.554437 | 5.4:-4790767 | MS.gene019291:CDS |
| AACCATTAGTGCTACCATTG+TGG | 0.555517 | 5.4:-4791793 | MS.gene019291:CDS |
| TGAGAAAGCAAGACGTTGCA+AGG | 0.556741 | 5.4:-4791266 | MS.gene019291:CDS |
| GTCAATGGCATAACCCAACT+TGG | 0.557603 | 5.4:+4791104 | None:intergenic |
| ATGATCCTGGTGATGACCCT+AGG | 0.560117 | 5.4:-4791698 | MS.gene019291:CDS |
| GGATTCGGATCAATCTCCCC+TGG | 0.561665 | 5.4:+4791666 | None:intergenic |
| CCCCTGGACGCAATTTCCTA+GGG | 0.562986 | 5.4:+4791682 | None:intergenic |
| ACGATCAAAAGTCATTCAAA+GGG | 0.567785 | 5.4:-4790437 | MS.gene019291:CDS |
| CAAAACAGTGTAAAGCTCGT+TGG | 0.569337 | 5.4:-4791929 | MS.gene019291:CDS |
| TTGCAGAGGGAGTCAGCAGT+GGG | 0.571318 | 5.4:+4790812 | None:intergenic |
| ACTACTATAGAAGAACTTGA+GGG | 0.571318 | 5.4:-4791318 | MS.gene019291:CDS |
| TAAAGGAGATGCTATCATGA+TGG | 0.573963 | 5.4:-4790959 | MS.gene019291:CDS |
| TTACTAGCTGGTGTTCTCTG+AGG | 0.578802 | 5.4:+4790979 | None:intergenic |
| TAGAGAAAAGGCAGAAGAAG+AGG | 0.579560 | 5.4:-4790485 | MS.gene019291:CDS |
| CCTTAACACAAGCGGCGTCA+AGG | 0.579579 | 5.4:+4791730 | None:intergenic |
| TTGATAGACCATATGTGTTG+CGG | 0.580931 | 5.4:+4789358 | None:intergenic |
| TCCGAAGGGAACTCCTCTCA+GGG | 0.580985 | 5.4:-4790716 | MS.gene019291:CDS |
| ATGGCTTGGTTGGGTGTCTG+TGG | 0.585691 | 5.4:+4791018 | None:intergenic |
| AAGGTTACATTACTCACGCA+AGG | 0.586053 | 5.4:-4789231 | MS.gene019291:CDS |
| AGTAAGGCCTGCACTTCCAG+GGG | 0.586407 | 5.4:+4790789 | None:intergenic |
| AACTCCTTGATAAGAGCTGA+CGG | 0.589304 | 5.4:-4790373 | MS.gene019291:CDS |
| CCTGATAATCTTCTATGACA+GGG | 0.589597 | 5.4:+4790182 | None:intergenic |
| GTAAAGCTCGTTGGTATGAG+TGG | 0.590546 | 5.4:-4791920 | MS.gene019291:CDS |
| GACTGAGTGGACTCGAGAAG+AGG | 0.592125 | 5.4:-4791877 | MS.gene019291:CDS |
| TGCTTCAACAAAATCCTCGA+GGG | 0.592155 | 5.4:+4789419 | None:intergenic |
| CTCCTTCGCAGTGTCTTGAA+CGG | 0.594673 | 5.4:-4791764 | MS.gene019291:CDS |
| TGCTGATGAGGATAGGGAGG+TGG | 0.595277 | 5.4:-4791358 | MS.gene019291:CDS |
| AGTGTTGCCAAAATGAGCAT+AGG | 0.596521 | 5.4:-4792053 | None:intergenic |
| TGAGAAGTAAGCTGGATGAT+GGG | 0.598085 | 5.4:-4789281 | MS.gene019291:CDS |
| TACTACTATAGAAGAACTTG+AGG | 0.598439 | 5.4:-4791319 | MS.gene019291:CDS |
| AAAAGGCAGAAGAAGAGGCA+CGG | 0.599691 | 5.4:-4790480 | MS.gene019291:CDS |
| TTTGAGAAGAGGCCTCCTCT+GGG | 0.600719 | 5.4:-4791393 | MS.gene019291:CDS |
| CTAATGGTTCTCCACTGAGT+AGG | 0.603402 | 5.4:+4791822 | None:intergenic |
| TGGAAGCTGAAAATTTGGCC+AGG | 0.607474 | 5.4:-4790939 | MS.gene019291:CDS |
| GCTCGGTTGGCTAACACGAA+AGG | 0.608258 | 5.4:-4791570 | MS.gene019291:CDS |
| TCTCAGACACCACTGTTAGG+AGG | 0.609284 | 5.4:-4790907 | MS.gene019291:CDS |
| AGCGGAGGAGGAAAAGGAGA+GGG | 0.609580 | 5.4:-4791440 | MS.gene019291:CDS |
| AGAAACAGCTTGAGGAAGCG+AGG | 0.613924 | 5.4:-4791521 | MS.gene019291:CDS |
| CAGCGGAGGAGGAAAAGGAG+AGG | 0.619802 | 5.4:-4791441 | MS.gene019291:CDS |
| CTGGGATTGATATAAGGCAG+CGG | 0.621106 | 5.4:-4791458 | MS.gene019291:CDS |
| ACTGTTAGGAGGAGAGAACC+CGG | 0.623267 | 5.4:-4790896 | MS.gene019291:CDS |
| GCAGGCCTTACTCCCAGAAG+TGG | 0.624004 | 5.4:-4790778 | MS.gene019291:CDS |
| CGAAGGAGTACGACCCACAA+TGG | 0.624367 | 5.4:+4791779 | None:intergenic |
| CCCTAGGAAATTGCGTCCAG+GGG | 0.631019 | 5.4:-4791682 | MS.gene019291:CDS |
| CTCGTCGGCTTGCTCAATAG+GGG | 0.633774 | 5.4:+4790324 | None:intergenic |
| AACAGCTTGAGGAAGCGAGG+AGG | 0.635219 | 5.4:-4791518 | MS.gene019291:CDS |
| GGCATGCAGAATAGCAGCCG+GGG | 0.639810 | 5.4:+4791218 | None:intergenic |
| AATTTCCTAGGGTCATCACC+AGG | 0.641833 | 5.4:+4791693 | None:intergenic |
| TGTTGCTGATGAGGATAGGG+AGG | 0.645550 | 5.4:-4791361 | MS.gene019291:CDS |
| AGAAGATGCTGAAGAGCCCG+AGG | 0.646686 | 5.4:-4790542 | MS.gene019291:CDS |
| CTACTATAGAAGAACTTGAG+GGG | 0.654103 | 5.4:-4791317 | MS.gene019291:CDS |
| GCCCGAGGAGAAGATTGAAG+AGG | 0.654306 | 5.4:-4790527 | MS.gene019291:CDS |
| ATAGTGCTAGACTCGAGCTA+CGG | 0.656913 | 5.4:-4790657 | MS.gene019291:CDS |
| TGAGTTCATCGCTGCCCACA+AGG | 0.658141 | 5.4:+4791082 | None:intergenic |
| GTTATCGTCCTTAACACAAG+CGG | 0.659717 | 5.4:+4791722 | None:intergenic |
| AATTCTTGATCGGAAATCTG+AGG | 0.665249 | 5.4:+4791138 | None:intergenic |
| AGCTAGGGAGAAACAGCTTG+AGG | 0.665565 | 5.4:-4791529 | MS.gene019291:CDS |
| TACCGTTCAAGACACTGCGA+AGG | 0.666095 | 5.4:+4791762 | None:intergenic |
| GGCAGCGATGAACTCACCGA+AGG | 0.666391 | 5.4:-4791075 | MS.gene019291:CDS |
| AGGTTACATTACTCACGCAA+GGG | 0.667391 | 5.4:-4789230 | MS.gene019291:CDS |
| CTAAGCTTACGCCTACTCAG+TGG | 0.671805 | 5.4:-4791833 | MS.gene019291:CDS |
| ACATCAAAATAACCCAGAGG+AGG | 0.672004 | 5.4:+4791381 | None:intergenic |
| TCTTGATCGGAAATCTGAGG+TGG | 0.678038 | 5.4:+4791141 | None:intergenic |
| GGGTTCTCTCCTCCTAACAG+TGG | 0.680208 | 5.4:+4790898 | None:intergenic |
| CAATGCTAAGTATCCGCGTG+AGG | 0.680301 | 5.4:-4790263 | MS.gene019291:CDS |
| CTTCCATTAAGAAGACTGAG+TGG | 0.680364 | 5.4:-4791890 | MS.gene019291:CDS |
| TTATTTGCTATCTCCTCACG+CGG | 0.684948 | 5.4:+4790250 | None:intergenic |
| TGAAGCCCAGTATCTTCGTG+AGG | 0.688109 | 5.4:-4789463 | MS.gene019291:CDS |
| GTGCTTCAACAAAATCCTCG+AGG | 0.688213 | 5.4:+4789418 | None:intergenic |
| ATATGTAGCTCATCCCTGAG+AGG | 0.688581 | 5.4:+4790703 | None:intergenic |
| AGTATCTTCGTGAGGCAATG+GGG | 0.691770 | 5.4:-4789455 | MS.gene019291:CDS |
| GGATTGATATAAGGCAGCGG+AGG | 0.699913 | 5.4:-4791455 | MS.gene019291:CDS |
| ATAAGCTCCAGAGATGCTGG+AGG | 0.701115 | 5.4:+4790400 | None:intergenic |
| TGATATGGATGAGTATGAGA+AGG | 0.714958 | 5.4:-4791613 | MS.gene019291:CDS |
| TGTCATAGAAGATTATCAGG+AGG | 0.727087 | 5.4:-4790179 | MS.gene019291:CDS |
| GCATGAAAATGATTCCCTCG+AGG | 0.731393 | 5.4:-4789433 | MS.gene019291:CDS |
| CAAGGAATAAAATTGCAGAG+AGG | 0.745082 | 5.4:-4791248 | MS.gene019291:CDS |
| GCAACATCAAAATAACCCAG+AGG | 0.761769 | 5.4:+4791378 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATCATTTGATTAATT+AGG | - | chr5.4:4791488-4791507 | MS.gene019291:CDS | 10.0% |
| !! | AGGCATAAAAATAAAATTAA+AGG | + | chr5.4:4791138-4791157 | None:intergenic | 15.0% |
| !! | ATTATAACTGAAAAAAAACA+AGG | + | chr5.4:4791475-4791494 | None:intergenic | 15.0% |
| !! | AAGTTTGTATTACTATCATT+CGG | + | chr5.4:4791626-4791645 | None:intergenic | 20.0% |
| !! | ATAATAATTAACAAGCAGTT+TGG | + | chr5.4:4791649-4791668 | None:intergenic | 20.0% |
| !!! | ACAAAGTACTAATAATTTCA+AGG | + | chr5.4:4791271-4791290 | None:intergenic | 20.0% |
| ! | AATTTCATCCAATTCTTGAT+CGG | + | chr5.4:4790125-4790144 | None:intergenic | 25.0% |
| ! | ATGAAGAAAAGCGAATTAAA+AGG | + | chr5.4:4791158-4791177 | None:intergenic | 25.0% |
| ! | GAAATATGGTAAAAATCAGT+GGG | - | chr5.4:4789265-4789284 | MS.gene019291:CDS | 25.0% |
| ! | GATGCCAAGTAATTAATAAT+CGG | + | chr5.4:4791294-4791313 | None:intergenic | 25.0% |
| ! | TGAAATATGGTAAAAATCAG+TGG | - | chr5.4:4789264-4789283 | MS.gene019291:CDS | 25.0% |
| ! | TTGTCCGATTATTAATTACT+TGG | - | chr5.4:4791287-4791306 | MS.gene019291:CDS | 25.0% |
| !! | ATGTGAATTTCCTTTTTCTT+AGG | + | chr5.4:4790412-4790431 | None:intergenic | 25.0% |
| !! | ATTTTTACATAAGATTCCAG+TGG | + | chr5.4:4791356-4791375 | None:intergenic | 25.0% |
| !! | TTTTATCTGTTGTTCTCAAT+AGG | - | chr5.4:4791745-4791764 | MS.gene019291:CDS | 25.0% |
| AAAAAGCAAAAAGGAAAGCT+AGG | - | chr5.4:4789705-4789724 | MS.gene019291:intron | 30.0% | |
| AAAAGCAAAAAGGAAAGCTA+GGG | - | chr5.4:4789706-4789725 | MS.gene019291:intron | 30.0% | |
| AAAGCTGCTGTTATGAAATA+TGG | - | chr5.4:4789251-4789270 | MS.gene019291:CDS | 30.0% | |
| AACGATCAAAAGTCATTCAA+AGG | - | chr5.4:4790812-4790831 | MS.gene019291:CDS | 30.0% | |
| AATATGCAACTAGCTCATAA+AGG | + | chr5.4:4791423-4791442 | None:intergenic | 30.0% | |
| ACAGAAAAAGAGAGAATTGA+AGG | - | chr5.4:4789766-4789785 | MS.gene019291:intron | 30.0% | |
| ACGATCAAAAGTCATTCAAA+GGG | - | chr5.4:4790813-4790832 | MS.gene019291:CDS | 30.0% | |
| ACTACTATAGAAGAACTTGA+GGG | - | chr5.4:4789932-4789951 | MS.gene019291:intron | 30.0% | |
| CAAGTTCTTCTATAGTAGTA+GGG | + | chr5.4:4789931-4789950 | None:intergenic | 30.0% | |
| CATCTCCATAGTCAAATTTA+AGG | + | chr5.4:4791678-4791697 | None:intergenic | 30.0% | |
| CGAAAGGTAAAAAAGCAAAA+AGG | - | chr5.4:4789696-4789715 | MS.gene019291:intron | 30.0% | |
| GCTACATATCAATGAAGATA+TGG | - | chr5.4:4790561-4790580 | MS.gene019291:CDS | 30.0% | |
| TACTACTATAGAAGAACTTG+AGG | - | chr5.4:4789931-4789950 | MS.gene019291:intron | 30.0% | |
| TAGGGAATACATGTTGTAAA+AGG | + | chr5.4:4791589-4791608 | None:intergenic | 30.0% | |
| TATGAGCTAGTTGCATATTA+TGG | - | chr5.4:4791424-4791443 | MS.gene019291:CDS | 30.0% | |
| TCAAGTTCTTCTATAGTAGT+AGG | + | chr5.4:4789932-4789951 | None:intergenic | 30.0% | |
| TGACTCCTTAAATTTGACTA+TGG | - | chr5.4:4791670-4791689 | MS.gene019291:CDS | 30.0% | |
| ! | ATCTCTTTCTAACTGTTTCT+GGG | + | chr5.4:4790072-4790091 | None:intergenic | 30.0% |
| !! | ACTATCTGGTACTCATTTTT+AGG | + | chr5.4:4790673-4790692 | None:intergenic | 30.0% |
| !!! | TTATTTTGATGTTGCTGATG+AGG | - | chr5.4:4789880-4789899 | MS.gene019291:intron | 30.0% |
| AATTCTTGATCGGAAATCTG+AGG | + | chr5.4:4790115-4790134 | None:intergenic | 35.0% | |
| ACTAATGGTTCTCCAACTAA+TGG | + | chr5.4:4789447-4789466 | None:intergenic | 35.0% | |
| AGAGGATATGTCTGATAGAA+TGG | - | chr5.4:4790741-4790760 | MS.gene019291:CDS | 35.0% | |
| ATTGGATGAAATTGCCAAGT+TGG | - | chr5.4:4790132-4790151 | MS.gene019291:intron | 35.0% | |
| ATTTCATAACAGCAGCTTTC+AGG | + | chr5.4:4789250-4789269 | None:intergenic | 35.0% | |
| CAAGGAATAAAATTGCAGAG+AGG | - | chr5.4:4790002-4790021 | MS.gene019291:intron | 35.0% | |
| CCTGATAATCTTCTATGACA+GGG | + | chr5.4:4791071-4791090 | None:intergenic | 35.0% | |
| CTACTATAGAAGAACTTGAG+GGG | - | chr5.4:4789933-4789952 | MS.gene019291:intron | 35.0% | |
| GAAAAGAAGGATTGATGTTG+AGG | - | chr5.4:4789955-4789974 | MS.gene019291:intron | 35.0% | |
| GATCTCTTTCTAACTGTTTC+TGG | + | chr5.4:4790073-4790092 | None:intergenic | 35.0% | |
| TAAAGGAGATGCTATCATGA+TGG | - | chr5.4:4790291-4790310 | MS.gene019291:CDS | 35.0% | |
| TAAGATTCCAGTGGTTTCAA+AGG | + | chr5.4:4791347-4791366 | None:intergenic | 35.0% | |
| TACTATCATTCGGCGAATTA+AGG | + | chr5.4:4791616-4791635 | None:intergenic | 35.0% | |
| TCAGATTTCCGATCAAGAAT+TGG | - | chr5.4:4790114-4790133 | MS.gene019291:intron | 35.0% | |
| TCATACTCATCCATATCAAC+AGG | + | chr5.4:4789635-4789654 | None:intergenic | 35.0% | |
| TCCTGATAATCTTCTATGAC+AGG | + | chr5.4:4791072-4791091 | None:intergenic | 35.0% | |
| TCGGCGAATTAAGGTAAATA+GGG | + | chr5.4:4791607-4791626 | None:intergenic | 35.0% | |
| TCTTCAGCATCTTCTTGAAT+TGG | + | chr5.4:4790703-4790722 | None:intergenic | 35.0% | |
| TGATAGAATGGCTAGAGAAA+AGG | - | chr5.4:4790753-4790772 | MS.gene019291:CDS | 35.0% | |
| TGATATGGATGAGTATGAGA+AGG | - | chr5.4:4789637-4789656 | MS.gene019291:intron | 35.0% | |
| TGTCATAGAAGATTATCAGG+AGG | - | chr5.4:4791071-4791090 | MS.gene019291:CDS | 35.0% | |
| TTCGGCGAATTAAGGTAAAT+AGG | + | chr5.4:4791608-4791627 | None:intergenic | 35.0% | |
| TTGATAGACCATATGTGTTG+CGG | + | chr5.4:4791895-4791914 | None:intergenic | 35.0% | |
| TTGGATGAAATTGCCAAGTT+GGG | - | chr5.4:4790133-4790152 | MS.gene019291:intron | 35.0% | |
| ! | CATGATGGAAGCTGAAAATT+TGG | - | chr5.4:4790306-4790325 | MS.gene019291:CDS | 35.0% |
| ! | TGCATCCTTCAGATTTTTCT+GGG | - | chr5.4:4790380-4790399 | MS.gene019291:CDS | 35.0% |
| ! | TTGCATCCTTCAGATTTTTC+TGG | - | chr5.4:4790379-4790398 | MS.gene019291:CDS | 35.0% |
| AAAGAAAAACCATCCCTTGC+CGG | + | chr5.4:4790505-4790524 | None:intergenic | 40.0% | |
| AAATCTGAAGGATGCAACTC+CGG | + | chr5.4:4790376-4790395 | None:intergenic | 40.0% | |
| AACCATTAGTGCTACCATTG+TGG | - | chr5.4:4789457-4789476 | MS.gene019291:CDS | 40.0% | |
| AACTCCTTGATAAGAGCTGA+CGG | - | chr5.4:4790877-4790896 | MS.gene019291:CDS | 40.0% | |
| AAGAACTTGAGGGGAAAAGA+AGG | - | chr5.4:4789942-4789961 | MS.gene019291:intron | 40.0% | |
| AAGGACGATAACTATGATCC+TGG | - | chr5.4:4789539-4789558 | MS.gene019291:intron | 40.0% | |
| AAGGTTACATTACTCACGCA+AGG | - | chr5.4:4792019-4792038 | MS.gene019291:CDS | 40.0% | |
| ACATCAAAATAACCCAGAGG+AGG | + | chr5.4:4789872-4789891 | None:intergenic | 40.0% | |
| ACCATTAGTGCTACCATTGT+GGG | - | chr5.4:4789458-4789477 | MS.gene019291:CDS | 40.0% | |
| AGCTTTCAGGATTTCATCCT+CGG | + | chr5.4:4789237-4789256 | None:intergenic | 40.0% | |
| AGGAGTTCTTAAAGGAGTCA+TGG | + | chr5.4:4790254-4790273 | None:intergenic | 40.0% | |
| AGGTTACATTACTCACGCAA+GGG | - | chr5.4:4792020-4792039 | MS.gene019291:CDS | 40.0% | |
| AGTCCACTCAGTCTTCTTAA+TGG | + | chr5.4:4789366-4789385 | None:intergenic | 40.0% | |
| ATAGCATCTCCTTTACTAGC+TGG | + | chr5.4:4790286-4790305 | None:intergenic | 40.0% | |
| ATCCTCTTCAATCTTCTCCT+CGG | + | chr5.4:4790728-4790747 | None:intergenic | 40.0% | |
| ATGAAAAAAAGTCTGCGCTC+TGG | - | chr5.4:4790628-4790647 | MS.gene019291:CDS | 40.0% | |
| CAAAACAGTGTAAAGCTCGT+TGG | - | chr5.4:4789321-4789340 | MS.gene019291:CDS | 40.0% | |
| CACTCAGTCTTCTTAATGGA+AGG | + | chr5.4:4789362-4789381 | None:intergenic | 40.0% | |
| CAGAAATTCCGTTTGAGAAG+AGG | - | chr5.4:4789846-4789865 | MS.gene019291:intron | 40.0% | |
| CCCTGTCATAGAAGATTATC+AGG | - | chr5.4:4791068-4791087 | MS.gene019291:CDS | 40.0% | |
| CTCATCCATATCAACAGGAT+CGG | + | chr5.4:4789630-4789649 | None:intergenic | 40.0% | |
| CTCCTTTCTTATCATCTCGT+CGG | + | chr5.4:4790944-4790963 | None:intergenic | 40.0% | |
| CTTCCATTAAGAAGACTGAG+TGG | - | chr5.4:4789360-4789379 | MS.gene019291:CDS | 40.0% | |
| GAATTGGTTGCATCACTATC+TGG | + | chr5.4:4790687-4790706 | None:intergenic | 40.0% | |
| GAGCTAGTTGCATATTATGG+TGG | - | chr5.4:4791427-4791446 | MS.gene019291:CDS | 40.0% | |
| GCAAATAAGGAGAGAGAGAA+AGG | - | chr5.4:4791015-4791034 | MS.gene019291:CDS | 40.0% | |
| GCAACATCAAAATAACCCAG+AGG | + | chr5.4:4789875-4789894 | None:intergenic | 40.0% | |
| GTTATCGTCCTTAACACAAG+CGG | + | chr5.4:4789531-4789550 | None:intergenic | 40.0% | |
| TAGAGAAAAGGCAGAAGAAG+AGG | - | chr5.4:4790765-4790784 | MS.gene019291:CDS | 40.0% | |
| TCATCCATATCAACAGGATC+GGG | + | chr5.4:4789629-4789648 | None:intergenic | 40.0% | |
| TCATTCAAAGGGAACTTCCT+AGG | - | chr5.4:4790824-4790843 | MS.gene019291:CDS | 40.0% | |
| TGAGAAGTAAGCTGGATGAT+GGG | - | chr5.4:4791969-4791988 | MS.gene019291:CDS | 40.0% | |
| TGAGAATGTGAGAAGTAAGC+TGG | - | chr5.4:4791961-4791980 | MS.gene019291:CDS | 40.0% | |
| TGATAGACCATATGTGTTGC+GGG | + | chr5.4:4791894-4791913 | None:intergenic | 40.0% | |
| TGATGTTGCTGATGAGGATA+GGG | - | chr5.4:4789886-4789905 | MS.gene019291:intron | 40.0% | |
| TGCAGATTTGCAAACGAGTA+GGG | + | chr5.4:4789303-4789322 | None:intergenic | 40.0% | |
| TGCTTCAACAAAATCCTCGA+GGG | + | chr5.4:4791834-4791853 | None:intergenic | 40.0% | |
| TGGGTGTCTGTGGATAATTA+GGG | + | chr5.4:4790225-4790244 | None:intergenic | 40.0% | |
| TTCTTAAAGGAGTCATGGCT+TGG | + | chr5.4:4790249-4790268 | None:intergenic | 40.0% | |
| TTGATGTTGCTGATGAGGAT+AGG | - | chr5.4:4789885-4789904 | MS.gene019291:intron | 40.0% | |
| TTGCAGATTTGCAAACGAGT+AGG | + | chr5.4:4789304-4789323 | None:intergenic | 40.0% | |
| TTGGGTGTCTGTGGATAATT+AGG | + | chr5.4:4790226-4790245 | None:intergenic | 40.0% | |
| TTTGATACCCGCAACACATA+TGG | - | chr5.4:4791884-4791903 | MS.gene019291:CDS | 40.0% | |
| ! | GATGATTCGACTTGAGAAGA+AGG | - | chr5.4:4792000-4792019 | MS.gene019291:CDS | 40.0% |
| ! | GCAAGGGATGGTTTTTCTTT+TGG | - | chr5.4:4790505-4790524 | MS.gene019291:CDS | 40.0% |
| ! | GCATCCTTCAGATTTTTCTG+GGG | - | chr5.4:4790381-4790400 | MS.gene019291:CDS | 40.0% |
| ! | GTTCTCTGAGGAGTTCTTAA+AGG | + | chr5.4:4790262-4790281 | None:intergenic | 40.0% |
| ! | TATGGTCTATCAAGTGTTGC+TGG | - | chr5.4:4791902-4791921 | MS.gene019291:CDS | 40.0% |
| ! | TGGTTTCAAAGGCGTGAAAA+GGG | + | chr5.4:4791336-4791355 | None:intergenic | 40.0% |
| ! | TGTTCACCTTTTCACCCTTT+GGG | - | chr5.4:4791194-4791213 | MS.gene019291:CDS | 40.0% |
| ! | TTGTTCACCTTTTCACCCTT+TGG | - | chr5.4:4791193-4791212 | MS.gene019291:CDS | 40.0% |
| !! | ACTCATTTTTAGGCTGTGGA+AGG | + | chr5.4:4790663-4790682 | None:intergenic | 40.0% |
| !! | TGGTACTCATTTTTAGGCTG+TGG | + | chr5.4:4790667-4790686 | None:intergenic | 40.0% |
| !! | TTATTTGCTATCTCCTCACG+CGG | + | chr5.4:4791003-4791022 | None:intergenic | 40.0% |
| AAAAGGCAGAAGAAGAGGCA+CGG | - | chr5.4:4790770-4790789 | MS.gene019291:CDS | 45.0% | |
| AAGAGAGAATTGAAGGCTGC+TGG | - | chr5.4:4789773-4789792 | MS.gene019291:intron | 45.0% | |
| AATCTGAAGGATGCAACTCC+GGG | + | chr5.4:4790375-4790394 | None:intergenic | 45.0% | |
| AATTTCCTAGGGTCATCACC+AGG | + | chr5.4:4789560-4789579 | None:intergenic | 45.0% | |
| ACCCACAATGGTAGCACTAA+TGG | + | chr5.4:4789462-4789481 | None:intergenic | 45.0% | |
| AGAGAGAATTGAAGGCTGCT+GGG | - | chr5.4:4789774-4789793 | MS.gene019291:intron | 45.0% | |
| AGCATTGTCATGCTCCAGTA+AGG | + | chr5.4:4790974-4790993 | None:intergenic | 45.0% | |
| AGCCGACGAGATGATAAGAA+AGG | - | chr5.4:4790939-4790958 | MS.gene019291:CDS | 45.0% | |
| AGGCTGCTGGGATTGATATA+AGG | - | chr5.4:4789786-4789805 | MS.gene019291:intron | 45.0% | |
| AGGTGTTTGGAAAAACACCG+AGG | - | chr5.4:4789217-4789236 | MS.gene019291:CDS | 45.0% | |
| AGTATCTTCGTGAGGCAATG+GGG | - | chr5.4:4791795-4791814 | MS.gene019291:CDS | 45.0% | |
| ATAGTGCTAGACTCGAGCTA+CGG | - | chr5.4:4790593-4790612 | MS.gene019291:CDS | 45.0% | |
| ATATGTAGCTCATCCCTGAG+AGG | + | chr5.4:4790550-4790569 | None:intergenic | 45.0% | |
| CAGAGAACACCAGCTAGTAA+AGG | - | chr5.4:4790274-4790293 | MS.gene019291:CDS | 45.0% | |
| CAGTATCTTCGTGAGGCAAT+GGG | - | chr5.4:4791794-4791813 | MS.gene019291:CDS | 45.0% | |
| CATTGCCTCACGAAGATACT+GGG | + | chr5.4:4791795-4791814 | None:intergenic | 45.0% | |
| CTAATAAGCTCCAGAGATGC+TGG | + | chr5.4:4790856-4790875 | None:intergenic | 45.0% | |
| CTAATGGTTCTCCACTGAGT+AGG | + | chr5.4:4789431-4789450 | None:intergenic | 45.0% | |
| CTCAGTGGAGAACCATTAGT+TGG | - | chr5.4:4789432-4789451 | MS.gene019291:CDS | 45.0% | |
| CTGGGATTGATATAAGGCAG+CGG | - | chr5.4:4789792-4789811 | MS.gene019291:intron | 45.0% | |
| GATCCAAACGAGCAGCAAAT+GGG | - | chr5.4:4791037-4791056 | MS.gene019291:CDS | 45.0% | |
| GCATGAAAATGATTCCCTCG+AGG | - | chr5.4:4791817-4791836 | MS.gene019291:CDS | 45.0% | |
| GCGTGAGGAGATAGCAAATA+AGG | - | chr5.4:4791002-4791021 | MS.gene019291:CDS | 45.0% | |
| GGTTATGCCATTGACCTTGT+GGG | - | chr5.4:4790154-4790173 | MS.gene019291:intron | 45.0% | |
| GTAAAGCTCGTTGGTATGAG+TGG | - | chr5.4:4789330-4789349 | MS.gene019291:CDS | 45.0% | |
| GTCAATGGCATAACCCAACT+TGG | + | chr5.4:4790149-4790168 | None:intergenic | 45.0% | |
| GTGACCCCAGAAAAATCTGA+AGG | + | chr5.4:4790388-4790407 | None:intergenic | 45.0% | |
| GTGAGAAGTAAGCTGGATGA+TGG | - | chr5.4:4791968-4791987 | MS.gene019291:CDS | 45.0% | |
| GTGCTTCAACAAAATCCTCG+AGG | + | chr5.4:4791835-4791854 | None:intergenic | 45.0% | |
| TCCTCTTCAATCTTCTCCTC+GGG | + | chr5.4:4790727-4790746 | None:intergenic | 45.0% | |
| TCTTCTATGACAGGGATAGC+AGG | + | chr5.4:4791063-4791082 | None:intergenic | 45.0% | |
| TCTTGATCGGAAATCTGAGG+TGG | + | chr5.4:4790112-4790131 | None:intergenic | 45.0% | |
| TGAAAATTTGGCCAGGCTGA+GGG | - | chr5.4:4790318-4790337 | MS.gene019291:CDS | 45.0% | |
| TGAGAAAGCAAGACGTTGCA+AGG | - | chr5.4:4789984-4790003 | MS.gene019291:intron | 45.0% | |
| TGGAAGCTGAAAATTTGGCC+AGG | - | chr5.4:4790311-4790330 | MS.gene019291:CDS | 45.0% | |
| TGGGGTCACTCCTAAGAAAA+AGG | - | chr5.4:4790399-4790418 | MS.gene019291:CDS | 45.0% | |
| TTACTAGCTGGTGTTCTCTG+AGG | + | chr5.4:4790274-4790293 | None:intergenic | 45.0% | |
| TTCTGGGTCATTCAGCTTCT+TGG | + | chr5.4:4790056-4790075 | None:intergenic | 45.0% | |
| ! | GGTTTCAAAGGCGTGAAAAG+GGG | + | chr5.4:4791335-4791354 | None:intergenic | 45.0% |
| ! | GTGGTTTCAAAGGCGTGAAA+AGG | + | chr5.4:4791337-4791356 | None:intergenic | 45.0% |
| ! | GTTCACCTTTTCACCCTTTG+GGG | - | chr5.4:4791195-4791214 | MS.gene019291:CDS | 45.0% |
| ! | TCTTTTGGCATGACTCCGAA+GGG | - | chr5.4:4790520-4790539 | MS.gene019291:CDS | 45.0% |
| ! | TGCTTTCAGAAGCATGTGCT+CGG | - | chr5.4:4789663-4789682 | MS.gene019291:intron | 45.0% |
| ! | TTCACCTTTTCACCCTTTGG+GGG | - | chr5.4:4791196-4791215 | MS.gene019291:CDS | 45.0% |
| ! | TTCTTTTGGCATGACTCCGA+AGG | - | chr5.4:4790519-4790538 | MS.gene019291:CDS | 45.0% |
| !! | AAAGGAGCTTCTAGCCTTAC+TGG | - | chr5.4:4790957-4790976 | MS.gene019291:CDS | 45.0% |
| !! | AAAGGAGTCATGGCTTGGTT+GGG | + | chr5.4:4790244-4790263 | None:intergenic | 45.0% |
| !! | AAGTAAGCTGGATGATGGGA+AGG | - | chr5.4:4791973-4791992 | MS.gene019291:CDS | 45.0% |
| !! | CAGCATCTCTGGAGCTTATT+AGG | - | chr5.4:4790854-4790873 | MS.gene019291:CDS | 45.0% |
| !! | TAAAGGAGTCATGGCTTGGT+TGG | + | chr5.4:4790245-4790264 | None:intergenic | 45.0% |
| !! | TTTCACGCCTTTGAAACCAC+TGG | - | chr5.4:4791337-4791356 | MS.gene019291:CDS | 45.0% |
| !! | AAAATTAAATAGAAAAAATT+TGG | - | chr5.4:4791371-4791390 | MS.gene019291:CDS | 5.0% |
| ACCCTAGGAAATTGCGTCCA+GGG | - | chr5.4:4789567-4789586 | MS.gene019291:intron | 50.0% | |
| ACGACCCGATCCTGTTGATA+TGG | - | chr5.4:4789622-4789641 | MS.gene019291:intron | 50.0% | |
| ACGAGTAGCACTGCTACCTT+CGG | + | chr5.4:4790194-4790213 | None:intergenic | 50.0% | |
| ACTGTTAGGAGGAGAGAACC+CGG | - | chr5.4:4790354-4790373 | MS.gene019291:CDS | 50.0% | |
| AGAAACAGCTTGAGGAAGCG+AGG | - | chr5.4:4789729-4789748 | MS.gene019291:intron | 50.0% | |
| AGAGGAGGCCTCTTCTCAAA+CGG | + | chr5.4:4789857-4789876 | None:intergenic | 50.0% | |
| AGCTAGGGAGAAACAGCTTG+AGG | - | chr5.4:4789721-4789740 | MS.gene019291:intron | 50.0% | |
| ATAAGCTCCAGAGATGCTGG+AGG | + | chr5.4:4790853-4790872 | None:intergenic | 50.0% | |
| ATCACGTTGTGTACCCCCAA+AGG | + | chr5.4:4791212-4791231 | None:intergenic | 50.0% | |
| CAATGCTAAGTATCCGCGTG+AGG | - | chr5.4:4790987-4791006 | MS.gene019291:CDS | 50.0% | |
| CCAGTATCTTCGTGAGGCAA+TGG | - | chr5.4:4791793-4791812 | MS.gene019291:CDS | 50.0% | |
| CCATTGCCTCACGAAGATAC+TGG | + | chr5.4:4791796-4791815 | None:intergenic | 50.0% | |
| CCTTACTCCCAGAAGTGGTA+TGG | - | chr5.4:4790477-4790496 | MS.gene019291:CDS | 50.0% | |
| CTAAGCTTACGCCTACTCAG+TGG | - | chr5.4:4789417-4789436 | MS.gene019291:CDS | 50.0% | |
| CTCCTTCGCAGTGTCTTGAA+CGG | - | chr5.4:4789486-4789505 | MS.gene019291:CDS | 50.0% | |
| CTGAAAATTTGGCCAGGCTG+AGG | - | chr5.4:4790317-4790336 | MS.gene019291:CDS | 50.0% | |
| GAGTCTCAGACACCACTGTT+AGG | - | chr5.4:4790340-4790359 | MS.gene019291:CDS | 50.0% | |
| GCAGGCTTCGATTCAGGATT+CGG | + | chr5.4:4789602-4789621 | None:intergenic | 50.0% | |
| GGATCCAAACGAGCAGCAAA+TGG | - | chr5.4:4791036-4791055 | MS.gene019291:CDS | 50.0% | |
| GGATTGATATAAGGCAGCGG+AGG | - | chr5.4:4789795-4789814 | MS.gene019291:intron | 50.0% | |
| GGGTTATGCCATTGACCTTG+TGG | - | chr5.4:4790153-4790172 | MS.gene019291:intron | 50.0% | |
| GTCTCCGTCAGCTCTTATCA+AGG | + | chr5.4:4790884-4790903 | None:intergenic | 50.0% | |
| TACCGTTCAAGACACTGCGA+AGG | + | chr5.4:4789491-4789510 | None:intergenic | 50.0% | |
| TCACGTTGTGTACCCCCAAA+GGG | + | chr5.4:4791211-4791230 | None:intergenic | 50.0% | |
| TCTCAGACACCACTGTTAGG+AGG | - | chr5.4:4790343-4790362 | MS.gene019291:CDS | 50.0% | |
| TGAAGCCCAGTATCTTCGTG+AGG | - | chr5.4:4791787-4791806 | MS.gene019291:CDS | 50.0% | |
| TGTACCCCCAAAGGGTGAAA+AGG | + | chr5.4:4791203-4791222 | None:intergenic | 50.0% | |
| TGTTGCTGATGAGGATAGGG+AGG | - | chr5.4:4789889-4789908 | MS.gene019291:intron | 50.0% | |
| TTGATATAAGGCAGCGGAGG+AGG | - | chr5.4:4789798-4789817 | MS.gene019291:intron | 50.0% | |
| TTGGCATGCAGAATAGCAGC+CGG | + | chr5.4:4790037-4790056 | None:intergenic | 50.0% | |
| TTTGAGAAGAGGCCTCCTCT+GGG | - | chr5.4:4789857-4789876 | MS.gene019291:intron | 50.0% | |
| ! | ATGATCCTGGTGATGACCCT+AGG | - | chr5.4:4789552-4789571 | MS.gene019291:intron | 50.0% |
| ! | CCATACCACTTCTGGGAGTA+AGG | + | chr5.4:4790480-4790499 | None:intergenic | 50.0% |
| ! | TGATCGGAAATCTGAGGTGG+TGG | + | chr5.4:4790109-4790128 | None:intergenic | 50.0% |
| ! | TTCAGAAGCATGTGCTCGGT+TGG | - | chr5.4:4789667-4789686 | MS.gene019291:intron | 50.0% |
| !! | ATCTCGTCGGCTTGCTCAAT+AGG | + | chr5.4:4790931-4790950 | None:intergenic | 50.0% |
| !! | TCTCGTCGGCTTGCTCAATA+GGG | + | chr5.4:4790930-4790949 | None:intergenic | 50.0% |
| AACAGCTTGAGGAAGCGAGG+AGG | - | chr5.4:4789732-4789751 | MS.gene019291:intron | 55.0% | |
| AGAAGATGCTGAAGAGCCCG+AGG | - | chr5.4:4790708-4790727 | MS.gene019291:CDS | 55.0% | |
| AGCGGAGGAGGAAAAGGAGA+GGG | - | chr5.4:4789810-4789829 | MS.gene019291:intron | 55.0% | |
| AGTAAGGCCTGCACTTCCAG+GGG | + | chr5.4:4790464-4790483 | None:intergenic | 55.0% | |
| ATCGCTGCCCACAAGGTCAA+TGG | + | chr5.4:4790164-4790183 | None:intergenic | 55.0% | |
| CCCCTGGACGCAATTTCCTA+GGG | + | chr5.4:4789571-4789590 | None:intergenic | 55.0% | |
| CCCTAGGAAATTGCGTCCAG+GGG | - | chr5.4:4789568-4789587 | MS.gene019291:intron | 55.0% | |
| CCTTAACACAAGCGGCGTCA+AGG | + | chr5.4:4789523-4789542 | None:intergenic | 55.0% | |
| CCTTGACGCCGCTTGTGTTA+AGG | - | chr5.4:4789520-4789539 | MS.gene019291:intron | 55.0% | |
| GACCCTAGGAAATTGCGTCC+AGG | - | chr5.4:4789566-4789585 | MS.gene019291:intron | 55.0% | |
| GAGTAAGGCCTGCACTTCCA+GGG | + | chr5.4:4790465-4790484 | None:intergenic | 55.0% | |
| GCCCGAGGAGAAGATTGAAG+AGG | - | chr5.4:4790723-4790742 | MS.gene019291:CDS | 55.0% | |
| GCTTGCTCAATAGGGGTTGG+TGG | + | chr5.4:4790922-4790941 | None:intergenic | 55.0% | |
| GGATTCGGATCAATCTCCCC+TGG | + | chr5.4:4789587-4789606 | None:intergenic | 55.0% | |
| GGGTTCTCTCCTCCTAACAG+TGG | + | chr5.4:4790355-4790374 | None:intergenic | 55.0% | |
| GTTTGAGAAGAGGCCTCCTC+TGG | - | chr5.4:4789856-4789875 | MS.gene019291:intron | 55.0% | |
| TAAGGCAGCGGAGGAGGAAA+AGG | - | chr5.4:4789804-4789823 | MS.gene019291:intron | 55.0% | |
| TCCCCTGGACGCAATTTCCT+AGG | + | chr5.4:4789572-4789591 | None:intergenic | 55.0% | |
| TCCCTGAGAGGAGTTCCCTT+CGG | + | chr5.4:4790538-4790557 | None:intergenic | 55.0% | |
| TCCGAAGGGAACTCCTCTCA+GGG | - | chr5.4:4790534-4790553 | MS.gene019291:CDS | 55.0% | |
| TGAGTTCATCGCTGCCCACA+AGG | + | chr5.4:4790171-4790190 | None:intergenic | 55.0% | |
| TGCTGATGAGGATAGGGAGG+TGG | - | chr5.4:4789892-4789911 | MS.gene019291:intron | 55.0% | |
| TGGCATGCAGAATAGCAGCC+GGG | + | chr5.4:4790036-4790055 | None:intergenic | 55.0% | |
| TTGCAGAGGGAGTCAGCAGT+GGG | + | chr5.4:4790441-4790460 | None:intergenic | 55.0% | |
| ! | AGAAGAAGAGGCACGGCAGA+AGG | - | chr5.4:4790777-4790796 | MS.gene019291:CDS | 55.0% |
| ! | AGGCCCATTTGCTGCTCGTT+TGG | + | chr5.4:4791043-4791062 | None:intergenic | 55.0% |
| ! | CGAAGGAGTACGACCCACAA+TGG | + | chr5.4:4789474-4789493 | None:intergenic | 55.0% |
| ! | GACTGAGTGGACTCGAGAAG+AGG | - | chr5.4:4789373-4789392 | MS.gene019291:CDS | 55.0% |
| ! | GCTCGGTTGGCTAACACGAA+AGG | - | chr5.4:4789680-4789699 | MS.gene019291:intron | 55.0% |
| ! | TCGGCTTGCTCAATAGGGGT+TGG | + | chr5.4:4790925-4790944 | None:intergenic | 55.0% |
| !! | ATGGCTTGGTTGGGTGTCTG+TGG | + | chr5.4:4790235-4790254 | None:intergenic | 55.0% |
| !! | CTCGTCGGCTTGCTCAATAG+GGG | + | chr5.4:4790929-4790948 | None:intergenic | 55.0% |
| AGAGATGCTGGAGGAGGCCT+AGG | + | chr5.4:4790844-4790863 | None:intergenic | 60.0% | |
| AGCTCCAGAGATGCTGGAGG+AGG | + | chr5.4:4790850-4790869 | None:intergenic | 60.0% | |
| CAGCGGAGGAGGAAAAGGAG+AGG | - | chr5.4:4789809-4789828 | MS.gene019291:intron | 60.0% | |
| CTCCGAAGGGAACTCCTCTC+AGG | - | chr5.4:4790533-4790552 | MS.gene019291:CDS | 60.0% | |
| GAGGGAGTCAGCAGTGGGAT+TGG | + | chr5.4:4790436-4790455 | None:intergenic | 60.0% | |
| GCACTTCCAGGGGTTGCAGA+GGG | + | chr5.4:4790454-4790473 | None:intergenic | 60.0% | |
| GCAGGCCTTACTCCCAGAAG+TGG | - | chr5.4:4790472-4790491 | MS.gene019291:CDS | 60.0% | |
| GGAGTAAGGCCTGCACTTCC+AGG | + | chr5.4:4790466-4790485 | None:intergenic | 60.0% | |
| GGCAGCGATGAACTCACCGA+AGG | - | chr5.4:4790175-4790194 | MS.gene019291:CDS | 60.0% | |
| GGCATGCAGAATAGCAGCCG+GGG | + | chr5.4:4790035-4790054 | None:intergenic | 60.0% | |
| GGTCGTGCAGGCTTCGATTC+AGG | + | chr5.4:4789608-4789627 | None:intergenic | 60.0% | |
| GTTGCAGAGGGAGTCAGCAG+TGG | + | chr5.4:4790442-4790461 | None:intergenic | 60.0% | |
| TAGGCCTCCTCCAGCATCTC+TGG | - | chr5.4:4790843-4790862 | MS.gene019291:CDS | 60.0% | |
| TCAACAGGATCGGGTCGTGC+AGG | + | chr5.4:4789620-4789639 | None:intergenic | 60.0% | |
| TCCCAGAAGTGGTATGGCGC+CGG | - | chr5.4:4790483-4790502 | MS.gene019291:CDS | 60.0% | |
| TGCACTTCCAGGGGTTGCAG+AGG | + | chr5.4:4790455-4790474 | None:intergenic | 60.0% | |
| TGCAGAGAGGCAAGATGCCC+CGG | - | chr5.4:4790015-4790034 | MS.gene019291:intron | 60.0% | |
| ! | TCTGCAACCCCTGGAAGTGC+AGG | - | chr5.4:4790454-4790473 | MS.gene019291:CDS | 60.0% |
| ! | TGTCTGAGACTCCCTCAGCC+TGG | + | chr5.4:4790332-4790351 | None:intergenic | 60.0% |
| !! | AAGTGGTATGGCGCCGGCAA+GGG | - | chr5.4:4790489-4790508 | MS.gene019291:CDS | 60.0% |
| CTGACTCCCTCTGCAACCCC+TGG | - | chr5.4:4790445-4790464 | MS.gene019291:CDS | 65.0% | |
| GCCGGCGCCATACCACTTCT+GGG | + | chr5.4:4790487-4790506 | None:intergenic | 65.0% | |
| TGCCGGCGCCATACCACTTC+TGG | + | chr5.4:4790488-4790507 | None:intergenic | 65.0% | |
| !! | GAAGTGGTATGGCGCCGGCA+AGG | - | chr5.4:4790488-4790507 | MS.gene019291:CDS | 65.0% |
| !! | GGTATGGCGCCGGCAAGGGA+TGG | - | chr5.4:4790493-4790512 | MS.gene019291:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 4789209 | 4792063 | 4789209 | ID=MS.gene019291 |
| chr5.4 | mRNA | 4789209 | 4792063 | 4789209 | ID=MS.gene019291.t1;Parent=MS.gene019291 |
| chr5.4 | exon | 4790165 | 4792063 | 4790165 | ID=MS.gene019291.t1.exon1;Parent=MS.gene019291.t1 |
| chr5.4 | CDS | 4790165 | 4792063 | 4790165 | ID=cds.MS.gene019291.t1;Parent=MS.gene019291.t1 |
| chr5.4 | exon | 4789209 | 4789505 | 4789209 | ID=MS.gene019291.t1.exon2;Parent=MS.gene019291.t1 |
| chr5.4 | CDS | 4789209 | 4789505 | 4789209 | ID=cds.MS.gene019291.t1;Parent=MS.gene019291.t1 |
| Gene Sequence |
| Protein sequence |
