Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82828.t1 | XP_013450761.1 | 99.5 | 201 | 1 | 0 | 1 | 201 | 1 | 201 | 6.10E-111 | 411 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82828.t1 | Q8W034 | 44.8 | 163 | 74 | 2 | 45 | 191 | 6 | 168 | 3.4e-38 | 160.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82828.t1 | A0A072U4W5 | 99.5 | 201 | 1 | 0 | 1 | 201 | 1 | 201 | 4.4e-111 | 411.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene82828 | 0.852429 | 4.64E-61 | -1.69E-46 |
| MS.gene049983 | MS.gene82828 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene82828 | 0.802337 | 5.88E-49 | -1.69E-46 |
| MS.gene050571 | MS.gene82828 | 0.830251 | 3.26E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene82828 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene82828 | 0.83649 | 9.08E-57 | -1.69E-46 |
| MS.gene050752 | MS.gene82828 | 0.81928 | 1.26E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene82828 | 0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene82828 | 0.871191 | 8.25E-67 | -1.69E-46 |
| MS.gene050955 | MS.gene82828 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene051003 | MS.gene82828 | 0.855117 | 7.82E-62 | -1.69E-46 |
| MS.gene051043 | MS.gene82828 | 0.801369 | 9.30E-49 | -1.69E-46 |
| MS.gene051233 | MS.gene82828 | 0.833271 | 5.87E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene82828 | 0.842289 | 2.83E-58 | -1.69E-46 |
| MS.gene051343 | MS.gene82828 | 0.843923 | 1.04E-58 | -1.69E-46 |
| MS.gene051597 | MS.gene82828 | 0.831669 | 1.46E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene82828 | 0.844297 | 8.25E-59 | -1.69E-46 |
| MS.gene051902 | MS.gene82828 | 0.843818 | 1.11E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene82828 | 0.844033 | 9.71E-59 | -1.69E-46 |
| MS.gene052342 | MS.gene82828 | 0.830708 | 2.52E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene82828 | 0.831854 | 1.32E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene82828 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene053058 | MS.gene82828 | 0.933018 | 3.55E-95 | -1.69E-46 |
| MS.gene053122 | MS.gene82828 | 0.800199 | 1.61E-48 | -1.69E-46 |
| MS.gene053298 | MS.gene82828 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene053564 | MS.gene82828 | 0.845695 | 3.46E-59 | -1.69E-46 |
| MS.gene053786 | MS.gene82828 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene82828 | 0.807396 | 5.16E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene82828 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene054413 | MS.gene82828 | 0.832414 | 9.58E-56 | -1.69E-46 |
| MS.gene054957 | MS.gene82828 | 0.809184 | 2.15E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene82828 | 0.814411 | 1.56E-51 | -1.69E-46 |
| MS.gene055222 | MS.gene82828 | 0.802762 | 4.81E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene82828 | 0.817796 | 2.74E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene82828 | 0.847073 | 1.46E-59 | -1.69E-46 |
| MS.gene056097 | MS.gene82828 | 0.826536 | 2.57E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene82828 | 0.829806 | 4.19E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene82828 | 0.852387 | 4.77E-61 | -1.69E-46 |
| MS.gene056509 | MS.gene82828 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene82828 | 0.8585 | 7.90E-63 | -1.69E-46 |
| MS.gene05689 | MS.gene82828 | 0.84809 | 7.65E-60 | -1.69E-46 |
| MS.gene056986 | MS.gene82828 | 0.83638 | 9.68E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene82828 | 0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene82828 | 0.819184 | 1.33E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene82828 | 0.872408 | 3.25E-67 | -1.69E-46 |
| MS.gene057890 | MS.gene82828 | -0.812805 | 3.52E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene82828 | 0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene82828 | 0.85075 | 1.39E-60 | -1.69E-46 |
| MS.gene058261 | MS.gene82828 | 0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene058976 | MS.gene82828 | 0.802427 | 5.64E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene82828 | 0.878487 | 2.70E-69 | -1.69E-46 |
| MS.gene05978 | MS.gene82828 | 0.811822 | 5.78E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene82828 | -0.827699 | 1.35E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene82828 | -0.826698 | 2.35E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene82828 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene82828 | 0.831961 | 1.24E-55 | -1.69E-46 |
| MS.gene060830 | MS.gene82828 | 0.825537 | 4.44E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene82828 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene82828 | 0.810363 | 1.20E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82828.t1 | MTR_6g004810 | 98.433 | 383 | 6 | 0 | 1 | 383 | 1 | 383 | 0.0 | 731 |
| MS.gene82828.t1 | MTR_3g082650 | 62.609 | 230 | 81 | 3 | 38 | 264 | 11 | 238 | 7.46e-89 | 272 |
| MS.gene82828.t1 | MTR_1g073690 | 42.857 | 189 | 89 | 2 | 45 | 215 | 6 | 193 | 2.91e-50 | 175 |
| MS.gene82828.t1 | MTR_2g026180 | 42.932 | 191 | 93 | 3 | 44 | 220 | 3 | 191 | 4.39e-50 | 175 |
| MS.gene82828.t1 | MTR_3g055990 | 40.000 | 300 | 148 | 10 | 45 | 316 | 6 | 301 | 7.62e-50 | 174 |
| MS.gene82828.t1 | MTR_3g055990 | 40.000 | 300 | 148 | 10 | 45 | 316 | 6 | 301 | 7.66e-50 | 174 |
| MS.gene82828.t1 | MTR_5g097580 | 39.431 | 246 | 120 | 4 | 45 | 262 | 6 | 250 | 1.22e-48 | 172 |
| MS.gene82828.t1 | MTR_5g097580 | 39.431 | 246 | 120 | 4 | 45 | 262 | 6 | 250 | 1.51e-48 | 171 |
| MS.gene82828.t1 | MTR_3g103420 | 40.314 | 191 | 94 | 2 | 45 | 216 | 10 | 199 | 2.78e-45 | 160 |
| MS.gene82828.t1 | MTR_5g017280 | 31.858 | 226 | 139 | 6 | 46 | 267 | 5 | 219 | 9.36e-31 | 121 |
| MS.gene82828.t1 | MTR_5g017280 | 28.231 | 294 | 145 | 7 | 46 | 292 | 93 | 367 | 1.68e-19 | 89.4 |
| MS.gene82828.t1 | MTR_5g017280 | 31.858 | 226 | 139 | 6 | 46 | 267 | 5 | 219 | 1.39e-30 | 121 |
| MS.gene82828.t1 | MTR_5g017280 | 28.231 | 294 | 145 | 7 | 46 | 292 | 93 | 367 | 2.26e-19 | 89.4 |
| MS.gene82828.t1 | MTR_2g026180 | 42.623 | 122 | 54 | 3 | 113 | 220 | 2 | 121 | 9.64e-24 | 102 |
| MS.gene82828.t1 | MTR_2g026180 | 48.718 | 78 | 39 | 1 | 46 | 122 | 37 | 114 | 4.70e-18 | 85.5 |
| MS.gene82828.t1 | MTR_7g107580 | 24.823 | 282 | 166 | 9 | 24 | 293 | 3 | 250 | 6.89e-19 | 87.4 |
| MS.gene82828.t1 | MTR_7g107580 | 24.823 | 282 | 166 | 9 | 24 | 293 | 3 | 250 | 1.10e-18 | 87.4 |
| MS.gene82828.t1 | MTR_7g107580 | 24.113 | 282 | 169 | 8 | 24 | 293 | 3 | 251 | 2.35e-18 | 86.7 |
| MS.gene82828.t1 | MTR_4g122650 | 28.879 | 232 | 123 | 9 | 37 | 244 | 72 | 285 | 4.68e-16 | 80.5 |
| MS.gene82828.t1 | MTR_4g088010 | 26.540 | 211 | 143 | 6 | 12 | 217 | 43 | 246 | 1.49e-15 | 77.8 |
| MS.gene82828.t1 | MTR_4g104470 | 26.590 | 173 | 121 | 2 | 46 | 212 | 123 | 295 | 3.20e-15 | 75.9 |
| MS.gene82828.t1 | MTR_8g463890 | 28.994 | 169 | 113 | 4 | 46 | 209 | 74 | 240 | 3.26e-15 | 77.0 |
| MS.gene82828.t1 | MTR_7g118120 | 30.168 | 179 | 109 | 6 | 5 | 181 | 70 | 234 | 9.95e-15 | 75.9 |
| MS.gene82828.t1 | MTR_5g088220 | 26.163 | 172 | 118 | 3 | 46 | 209 | 166 | 336 | 2.13e-13 | 71.6 |
| MS.gene82828.t1 | MTR_3g084040 | 41.429 | 70 | 41 | 0 | 128 | 197 | 31 | 100 | 4.08e-13 | 65.5 |
| MS.gene82828.t1 | MTR_3g027140 | 25.258 | 194 | 120 | 4 | 34 | 209 | 49 | 235 | 4.82e-13 | 68.6 |
| MS.gene82828.t1 | MTR_7g013730 | 34.513 | 113 | 71 | 3 | 101 | 212 | 9 | 119 | 9.96e-13 | 67.8 |
| MS.gene82828.t1 | MTR_3g084040 | 38.554 | 83 | 50 | 1 | 132 | 214 | 35 | 116 | 1.50e-12 | 65.1 |
| MS.gene82828.t1 | MTR_2g097960 | 27.429 | 175 | 121 | 2 | 47 | 215 | 17 | 191 | 8.12e-12 | 66.6 |
| MS.gene82828.t1 | MTR_4g109540 | 32.710 | 107 | 69 | 1 | 109 | 212 | 15 | 121 | 1.03e-11 | 65.1 |
| MS.gene82828.t1 | MTR_3g065190 | 26.036 | 169 | 111 | 4 | 48 | 209 | 28 | 189 | 1.18e-11 | 65.9 |
| MS.gene82828.t1 | MTR_4g085540 | 27.222 | 180 | 106 | 6 | 38 | 197 | 206 | 380 | 1.40e-11 | 66.6 |
| MS.gene82828.t1 | MTR_4g070190 | 49.153 | 59 | 30 | 0 | 46 | 104 | 9 | 67 | 2.68e-11 | 62.0 |
| MS.gene82828.t1 | MTR_4g070080 | 47.458 | 59 | 31 | 0 | 46 | 104 | 7 | 65 | 2.81e-11 | 60.8 |
| MS.gene82828.t1 | MTR_3g025880 | 35.802 | 81 | 52 | 0 | 132 | 212 | 43 | 123 | 2.84e-11 | 65.1 |
| MS.gene82828.t1 | MTR_4g070080 | 47.458 | 59 | 31 | 0 | 46 | 104 | 7 | 65 | 6.14e-11 | 60.8 |
| MS.gene82828.t1 | MTR_4g070140 | 43.548 | 62 | 35 | 0 | 46 | 107 | 9 | 70 | 6.20e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82828.t1 | AT5G40490 | 71.220 | 205 | 58 | 1 | 28 | 231 | 24 | 228 | 2.71e-97 | 296 |
| MS.gene82828.t1 | AT3G13224 | 72.059 | 204 | 54 | 2 | 33 | 233 | 7 | 210 | 1.12e-95 | 290 |
| MS.gene82828.t1 | AT3G13224 | 72.775 | 191 | 49 | 2 | 46 | 233 | 11 | 201 | 3.33e-90 | 275 |
| MS.gene82828.t1 | AT3G13224 | 43.373 | 83 | 45 | 1 | 132 | 214 | 9 | 89 | 6.63e-13 | 69.7 |
| MS.gene82828.t1 | AT5G40490 | 70.492 | 183 | 54 | 0 | 49 | 231 | 29 | 211 | 6.28e-90 | 277 |
| MS.gene82828.t1 | AT3G13224 | 73.596 | 178 | 45 | 1 | 33 | 208 | 7 | 184 | 1.53e-88 | 267 |
| MS.gene82828.t1 | AT1G17640 | 50.000 | 208 | 87 | 3 | 44 | 245 | 65 | 261 | 1.02e-62 | 205 |
| MS.gene82828.t1 | AT1G17640 | 50.000 | 208 | 87 | 3 | 44 | 245 | 65 | 261 | 1.02e-62 | 205 |
| MS.gene82828.t1 | AT1G17640 | 50.000 | 208 | 87 | 3 | 44 | 245 | 65 | 261 | 1.02e-62 | 205 |
| MS.gene82828.t1 | AT4G26650 | 34.392 | 378 | 192 | 10 | 45 | 375 | 12 | 380 | 1.84e-52 | 181 |
| MS.gene82828.t1 | AT4G26650 | 41.414 | 99 | 57 | 1 | 38 | 135 | 112 | 210 | 4.69e-17 | 82.8 |
| MS.gene82828.t1 | AT4G26650 | 34.392 | 378 | 192 | 10 | 45 | 375 | 15 | 383 | 2.06e-52 | 181 |
| MS.gene82828.t1 | AT4G26650 | 41.414 | 99 | 57 | 1 | 38 | 135 | 115 | 213 | 4.83e-17 | 82.8 |
| MS.gene82828.t1 | AT4G14300 | 44.385 | 187 | 87 | 3 | 45 | 215 | 6 | 191 | 6.51e-52 | 178 |
| MS.gene82828.t1 | AT4G14300 | 44.385 | 187 | 87 | 3 | 45 | 215 | 6 | 191 | 6.51e-52 | 178 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 6.60e-48 | 169 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 3.27e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 6.60e-48 | 169 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 3.27e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 6.60e-48 | 169 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 3.27e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 6.60e-48 | 169 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 3.27e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 6.60e-48 | 169 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 3.27e-16 | 80.1 |
| MS.gene82828.t1 | AT2G33410 | 43.850 | 187 | 88 | 4 | 45 | 215 | 6 | 191 | 7.05e-48 | 167 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 1.12e-47 | 168 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 4.28e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 1.12e-47 | 168 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 4.28e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 1.12e-47 | 168 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 4.28e-16 | 80.1 |
| MS.gene82828.t1 | AT5G55550 | 44.324 | 185 | 86 | 3 | 45 | 213 | 6 | 189 | 1.12e-47 | 168 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 91 | 198 | 4.28e-16 | 80.1 |
| MS.gene82828.t1 | AT3G07810 | 39.357 | 249 | 130 | 6 | 45 | 278 | 6 | 248 | 1.62e-47 | 169 |
| MS.gene82828.t1 | AT3G07810 | 40.777 | 103 | 57 | 2 | 24 | 122 | 84 | 186 | 1.48e-17 | 84.7 |
| MS.gene82828.t1 | AT3G07810 | 39.357 | 249 | 130 | 6 | 45 | 278 | 6 | 248 | 1.68e-47 | 169 |
| MS.gene82828.t1 | AT3G07810 | 40.777 | 103 | 57 | 2 | 24 | 122 | 84 | 186 | 1.59e-17 | 84.3 |
| MS.gene82828.t1 | AT5G47620 | 39.130 | 253 | 125 | 8 | 46 | 275 | 7 | 253 | 6.20e-46 | 163 |
| MS.gene82828.t1 | AT5G47620 | 39.130 | 253 | 125 | 8 | 46 | 275 | 7 | 253 | 6.20e-46 | 163 |
| MS.gene82828.t1 | AT5G47620 | 39.130 | 253 | 125 | 8 | 46 | 275 | 7 | 253 | 6.20e-46 | 163 |
| MS.gene82828.t1 | AT5G47620 | 36.264 | 273 | 127 | 9 | 46 | 275 | 7 | 275 | 1.82e-41 | 151 |
| MS.gene82828.t1 | AT5G55550 | 35.776 | 232 | 85 | 4 | 45 | 213 | 6 | 236 | 5.23e-40 | 148 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 138 | 245 | 6.49e-16 | 79.7 |
| MS.gene82828.t1 | AT5G55550 | 35.776 | 232 | 85 | 4 | 45 | 213 | 6 | 236 | 8.83e-40 | 148 |
| MS.gene82828.t1 | AT5G55550 | 37.037 | 108 | 67 | 1 | 26 | 132 | 138 | 245 | 8.29e-16 | 79.3 |
| MS.gene82828.t1 | AT1G58470 | 34.615 | 234 | 109 | 4 | 46 | 244 | 7 | 231 | 1.40e-39 | 144 |
| MS.gene82828.t1 | AT1G58470 | 34.615 | 234 | 109 | 4 | 46 | 244 | 7 | 231 | 1.40e-39 | 144 |
| MS.gene82828.t1 | AT4G36960 | 32.370 | 173 | 115 | 1 | 46 | 218 | 4 | 174 | 5.23e-31 | 122 |
| MS.gene82828.t1 | AT4G36960 | 33.071 | 127 | 61 | 4 | 133 | 243 | 3 | 121 | 1.26e-11 | 65.9 |
| MS.gene82828.t1 | AT4G36960 | 32.370 | 173 | 115 | 1 | 46 | 218 | 4 | 174 | 5.23e-31 | 122 |
| MS.gene82828.t1 | AT4G36960 | 33.071 | 127 | 61 | 4 | 133 | 243 | 3 | 121 | 1.26e-11 | 65.9 |
| MS.gene82828.t1 | AT5G47620 | 35.354 | 198 | 98 | 9 | 102 | 275 | 2 | 193 | 3.59e-22 | 97.1 |
| MS.gene82828.t1 | AT5G47620 | 44.660 | 103 | 48 | 3 | 26 | 122 | 25 | 124 | 3.21e-19 | 88.6 |
| MS.gene82828.t1 | AT4G03110 | 25.385 | 260 | 166 | 8 | 46 | 292 | 19 | 263 | 2.89e-19 | 89.4 |
| MS.gene82828.t1 | AT4G03110 | 25.385 | 260 | 166 | 8 | 46 | 292 | 19 | 263 | 6.84e-19 | 88.2 |
| MS.gene82828.t1 | AT4G03110 | 27.126 | 247 | 144 | 8 | 46 | 281 | 19 | 240 | 1.71e-18 | 87.0 |
| MS.gene82828.t1 | AT1G03457 | 29.609 | 179 | 106 | 5 | 46 | 213 | 13 | 182 | 1.65e-16 | 81.3 |
| MS.gene82828.t1 | AT5G50250 | 28.161 | 174 | 119 | 2 | 45 | 212 | 113 | 286 | 1.80e-16 | 79.3 |
| MS.gene82828.t1 | AT4G16280 | 28.497 | 193 | 109 | 6 | 38 | 213 | 113 | 293 | 3.50e-16 | 80.9 |
| MS.gene82828.t1 | AT4G16280 | 28.497 | 193 | 109 | 6 | 38 | 213 | 38 | 218 | 3.61e-16 | 80.9 |
| MS.gene82828.t1 | AT4G16280 | 28.497 | 193 | 109 | 6 | 38 | 213 | 113 | 293 | 5.34e-16 | 80.1 |
| MS.gene82828.t1 | AT4G00830 | 31.285 | 179 | 109 | 7 | 6 | 181 | 79 | 246 | 1.21e-15 | 78.6 |
| MS.gene82828.t1 | AT4G00830 | 31.285 | 179 | 109 | 7 | 6 | 181 | 79 | 246 | 1.21e-15 | 78.6 |
| MS.gene82828.t1 | AT4G00830 | 31.285 | 179 | 109 | 7 | 6 | 181 | 79 | 246 | 1.21e-15 | 78.6 |
| MS.gene82828.t1 | AT4G00830 | 30.726 | 179 | 110 | 7 | 6 | 181 | 79 | 246 | 1.25e-15 | 78.6 |
| MS.gene82828.t1 | AT4G24770 | 25.556 | 180 | 124 | 3 | 45 | 218 | 150 | 325 | 1.87e-15 | 77.0 |
| MS.gene82828.t1 | AT4G24770 | 25.556 | 180 | 124 | 3 | 45 | 218 | 150 | 325 | 1.87e-15 | 77.0 |
| MS.gene82828.t1 | AT1G03457 | 29.221 | 154 | 89 | 4 | 46 | 185 | 13 | 160 | 4.35e-15 | 77.0 |
| MS.gene82828.t1 | AT3G52380 | 28.205 | 195 | 118 | 5 | 45 | 220 | 116 | 307 | 1.38e-14 | 74.7 |
| MS.gene82828.t1 | AT5G54900 | 29.677 | 155 | 101 | 4 | 47 | 193 | 62 | 216 | 2.77e-14 | 73.9 |
| MS.gene82828.t1 | AT5G54900 | 26.404 | 178 | 107 | 6 | 47 | 206 | 156 | 327 | 8.14e-11 | 63.5 |
| MS.gene82828.t1 | AT5G04280 | 39.241 | 79 | 48 | 0 | 134 | 212 | 8 | 86 | 1.73e-13 | 70.9 |
| MS.gene82828.t1 | AT5G04280 | 37.975 | 79 | 47 | 1 | 46 | 122 | 8 | 86 | 2.78e-12 | 67.4 |
| MS.gene82828.t1 | AT4G00830 | 30.508 | 177 | 105 | 6 | 6 | 181 | 79 | 238 | 4.30e-13 | 70.9 |
| MS.gene82828.t1 | AT4G00830 | 30.508 | 177 | 105 | 6 | 6 | 181 | 79 | 238 | 4.30e-13 | 70.9 |
| MS.gene82828.t1 | AT1G71770 | 26.136 | 176 | 109 | 6 | 41 | 197 | 233 | 406 | 4.66e-13 | 71.2 |
| MS.gene82828.t1 | AT1G71770 | 26.136 | 176 | 109 | 6 | 41 | 197 | 233 | 406 | 4.66e-13 | 71.2 |
| MS.gene82828.t1 | AT2G41060 | 26.979 | 341 | 198 | 12 | 46 | 358 | 129 | 446 | 6.75e-13 | 70.1 |
| MS.gene82828.t1 | AT2G41060 | 26.979 | 341 | 198 | 12 | 46 | 358 | 129 | 446 | 6.75e-13 | 70.1 |
| MS.gene82828.t1 | AT2G41060 | 26.979 | 341 | 198 | 12 | 46 | 358 | 129 | 446 | 6.75e-13 | 70.1 |
| MS.gene82828.t1 | AT3G52150 | 27.778 | 180 | 111 | 4 | 46 | 209 | 77 | 253 | 2.30e-12 | 67.0 |
| MS.gene82828.t1 | AT3G52150 | 27.778 | 180 | 111 | 4 | 46 | 209 | 77 | 253 | 2.30e-12 | 67.0 |
| MS.gene82828.t1 | AT5G61030 | 32.692 | 104 | 68 | 1 | 111 | 212 | 16 | 119 | 3.74e-12 | 67.0 |
| MS.gene82828.t1 | AT5G61030 | 32.692 | 104 | 68 | 1 | 111 | 212 | 16 | 119 | 3.74e-12 | 67.0 |
| MS.gene82828.t1 | AT3G26420 | 32.530 | 83 | 56 | 0 | 134 | 216 | 8 | 90 | 3.92e-12 | 66.2 |
| MS.gene82828.t1 | AT1G60650 | 40.506 | 79 | 47 | 0 | 134 | 212 | 13 | 91 | 8.66e-12 | 65.9 |
| MS.gene82828.t1 | AT1G60650 | 36.667 | 90 | 55 | 1 | 35 | 122 | 2 | 91 | 2.07e-11 | 64.7 |
| MS.gene82828.t1 | AT1G60650 | 40.506 | 79 | 47 | 0 | 134 | 212 | 13 | 91 | 8.66e-12 | 65.9 |
| MS.gene82828.t1 | AT1G60650 | 36.667 | 90 | 55 | 1 | 35 | 122 | 2 | 91 | 2.07e-11 | 64.7 |
| MS.gene82828.t1 | AT1G34140 | 27.500 | 200 | 117 | 9 | 47 | 220 | 121 | 318 | 1.17e-11 | 66.2 |
| MS.gene82828.t1 | AT3G23830 | 32.292 | 96 | 64 | 1 | 125 | 220 | 27 | 121 | 3.60e-11 | 60.8 |
| MS.gene82828.t1 | AT3G23830 | 32.292 | 96 | 64 | 1 | 125 | 220 | 27 | 121 | 3.60e-11 | 60.8 |
| MS.gene82828.t1 | AT2G23350 | 24.848 | 165 | 106 | 4 | 47 | 195 | 227 | 389 | 4.88e-11 | 64.7 |
| MS.gene82828.t1 | AT1G76460 | 40.625 | 64 | 38 | 0 | 46 | 109 | 25 | 88 | 4.91e-11 | 63.5 |
| MS.gene82828.t1 | AT2G18510 | 27.517 | 149 | 94 | 4 | 47 | 188 | 27 | 168 | 7.22e-11 | 63.5 |
| MS.gene82828.t1 | AT1G20880 | 34.247 | 73 | 47 | 1 | 46 | 117 | 25 | 97 | 8.67e-11 | 62.4 |
| MS.gene82828.t1 | AT1G20880 | 34.247 | 73 | 47 | 1 | 46 | 117 | 25 | 97 | 8.67e-11 | 62.4 |
| MS.gene82828.t1 | AT1G20880 | 34.247 | 73 | 47 | 1 | 46 | 117 | 25 | 97 | 8.67e-11 | 62.4 |
| MS.gene82828.t1 | AT4G34110 | 29.940 | 167 | 105 | 6 | 32 | 190 | 113 | 275 | 8.69e-11 | 63.9 |
Find 143 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAAAGTGCTTGATAAAT+TGG | 0.098523 | 6.1:+926695 | None:intergenic |
| ATCAAGCACTTTGGTAAATA+TGG | 0.173151 | 6.1:-926688 | MS.gene82828:CDS |
| GTGGCGGATTTGGTGGTGTT+GGG | 0.236142 | 6.1:-924515 | MS.gene82828:CDS |
| ACTGGACAGCCTCGTGGATT+TGG | 0.238397 | 6.1:-926628 | MS.gene82828:CDS |
| TAGAGTGGTCACGCATTATT+TGG | 0.254668 | 6.1:+925746 | None:intergenic |
| TGTTGATGATCTTCTATCTA+TGG | 0.261047 | 6.1:-925674 | MS.gene82828:CDS |
| GGTGGTGCATTTGCCTTCTT+TGG | 0.267077 | 6.1:+924615 | None:intergenic |
| GATGGATTTGGTGGCGGATT+TGG | 0.272940 | 6.1:-924525 | MS.gene82828:CDS |
| ACTAATCGTTCCCGTGGCTT+TGG | 0.284542 | 6.1:-925724 | MS.gene82828:CDS |
| CTAATCGTTCCCGTGGCTTT+GGG | 0.301051 | 6.1:-925723 | MS.gene82828:CDS |
| TGGCGGATTTGGTGGTGTTG+GGG | 0.303390 | 6.1:-924514 | MS.gene82828:CDS |
| CTGGACAGCCTCGTGGATTT+GGG | 0.305486 | 6.1:-926627 | MS.gene82828:CDS |
| AGCAGGTCTGGCAGTGCTTA+TGG | 0.306308 | 6.1:-924483 | MS.gene82828:CDS |
| GCTAGTGGAGCTTCCTTCTA+TGG | 0.310496 | 6.1:-924168 | MS.gene82828:CDS |
| GCTGGCGGAGGTGGTTCTTC+TGG | 0.312920 | 6.1:-924249 | MS.gene82828:CDS |
| GCCAGCCTTGGTGGTGGATA+TGG | 0.320194 | 6.1:-924198 | MS.gene82828:CDS |
| GGTGGCGGATTTGGTGGTGT+TGG | 0.320755 | 6.1:-924516 | MS.gene82828:CDS |
| GCGGACTTGGTGAGAGTTAT+GGG | 0.348555 | 6.1:-924302 | MS.gene82828:CDS |
| ACCGGTGATGGTGCTAGTCC+TGG | 0.349709 | 6.1:-927650 | MS.gene82828:CDS |
| TCCACCTCTGCTTCCATAGA+AGG | 0.351882 | 6.1:+924155 | None:intergenic |
| GCCGGTGCAGGTGCTGCTGC+TGG | 0.353326 | 6.1:-924267 | MS.gene82828:CDS |
| ATCATGAAGGACAGGAAAAC+TGG | 0.357656 | 6.1:-926646 | MS.gene82828:CDS |
| GCATATGGTGGTGCCGGTGC+AGG | 0.360556 | 6.1:-924279 | MS.gene82828:CDS |
| GGTGGATATGCTGGAGCAAT+GGG | 0.361158 | 6.1:-924411 | MS.gene82828:CDS |
| GGTGCTGCTGCTGGCGGAGG+TGG | 0.363194 | 6.1:-924258 | MS.gene82828:CDS |
| AAGGGGAGCTGTTGGCTCTA+AGG | 0.366354 | 6.1:-926386 | MS.gene82828:CDS |
| GGAGATGCTTATGATGGATT+TGG | 0.368480 | 6.1:-924537 | MS.gene82828:CDS |
| CTACCTTCAGTCACATTTGA+AGG | 0.376711 | 6.1:+926328 | None:intergenic |
| ACCAAAGTGCTTGATAAATT+GGG | 0.384066 | 6.1:+926696 | None:intergenic |
| CTGGCAGTGCTTATGGTGGT+AGG | 0.388131 | 6.1:-924476 | MS.gene82828:CDS |
| CATAACTCTCAATCCCTTAC+CGG | 0.393954 | 6.1:-927668 | MS.gene82828:CDS |
| TATGGAAGCAGAGGTGGATA+TGG | 0.395763 | 6.1:-924150 | MS.gene82828:CDS |
| AGGACAAAGAAAATATTTGT+AGG | 0.395931 | 6.1:-926358 | MS.gene82828:CDS |
| ATTTGCAGAAAGATATTCAT+AGG | 0.399185 | 6.1:-926883 | MS.gene82828:intron |
| GGCGGACTTGGTGAGAGTTA+TGG | 0.400908 | 6.1:-924303 | MS.gene82828:CDS |
| GGCTATGGAAGTGAGTTTGC+TGG | 0.412667 | 6.1:-924438 | MS.gene82828:CDS |
| GCAGGTGCTGCTGCTGGCGG+AGG | 0.413476 | 6.1:-924261 | MS.gene82828:CDS |
| CTAGCATATGCAGGTCGTTA+TGG | 0.428760 | 6.1:-924363 | MS.gene82828:CDS |
| CCTAGTGGGTATGGCGGACT+TGG | 0.432034 | 6.1:-924315 | MS.gene82828:CDS |
| GCTGGGTATGGTGGATATGC+TGG | 0.433435 | 6.1:-924420 | MS.gene82828:CDS |
| GCCAGCAGCAGCACCTGCAC+CGG | 0.440954 | 6.1:+924266 | None:intergenic |
| GGCGGATTTGGTGGTGTTGG+GGG | 0.442257 | 6.1:-924513 | MS.gene82828:CDS |
| GGAGGTGGTTCTTCTGGTGC+TGG | 0.445012 | 6.1:-924243 | MS.gene82828:CDS |
| GGGAACAAGATTGAGTTTGC+TGG | 0.445889 | 6.1:-925652 | MS.gene82828:CDS |
| GGATTTGGTGGCGGATTTGG+TGG | 0.446810 | 6.1:-924522 | MS.gene82828:CDS |
| GTTGATGATCTTCTATCTAT+GGG | 0.448816 | 6.1:-925673 | MS.gene82828:CDS |
| GGCTATGATGCCAGCCTTGG+TGG | 0.451052 | 6.1:-924207 | MS.gene82828:CDS |
| GGAAGTGAGTTTGCTGGGTA+TGG | 0.452480 | 6.1:-924432 | MS.gene82828:CDS |
| AACGATCACATCATTGGAAC+CGG | 0.453136 | 6.1:-927746 | MS.gene82828:CDS |
| CCTTGAGTCATTGTAGCGCT+TGG | 0.454635 | 6.1:+924584 | None:intergenic |
| TGGCAGTGCTTATGGTGGTA+GGG | 0.459037 | 6.1:-924475 | MS.gene82828:CDS |
| TGGTGGATATGCTGGAGCAA+TGG | 0.461072 | 6.1:-924412 | MS.gene82828:CDS |
| ATATCATCCGTATGGAAGAT+AGG | 0.479021 | 6.1:-924115 | None:intergenic |
| TCCATATCCACCACCAAGGC+TGG | 0.479238 | 6.1:+924197 | None:intergenic |
| TCATACGGCAGTGGTGGGTA+TGG | 0.479648 | 6.1:-924558 | MS.gene82828:CDS |
| GGCTATGATCCTAGTGGGTA+TGG | 0.490193 | 6.1:-924324 | MS.gene82828:CDS |
| GGTGAGAGTTATGGGGCATA+TGG | 0.491009 | 6.1:-924294 | MS.gene82828:CDS |
| CAAGAAGGCTGAACCAAAGA+AGG | 0.494018 | 6.1:-924628 | MS.gene82828:CDS |
| GGTGGTCCGTATGGTGGCTA+TGG | 0.495116 | 6.1:-924453 | MS.gene82828:CDS |
| GTCCTTCATGATGACGGAAT+CGG | 0.496780 | 6.1:+926657 | None:intergenic |
| GGCAGTGCTTATGGTGGTAG+GGG | 0.498411 | 6.1:-924474 | MS.gene82828:CDS |
| GACTAGCACCATCACCGGTA+AGG | 0.499889 | 6.1:+927654 | None:intergenic |
| GCCCAATTTATCAAGCACTT+TGG | 0.500202 | 6.1:-926697 | MS.gene82828:CDS |
| GGTGGTAGGGGTGGTCCGTA+TGG | 0.504580 | 6.1:-924462 | MS.gene82828:CDS |
| TCTCAATCCCTTACCGGTGA+TGG | 0.507022 | 6.1:-927662 | MS.gene82828:CDS |
| GATTGAGTTTGCTGGCACTC+AGG | 0.509507 | 6.1:-925644 | MS.gene82828:intron |
| AGTGCTTATGGTGGTAGGGG+TGG | 0.514243 | 6.1:-924471 | MS.gene82828:CDS |
| TCCTTCTATGGAAGCAGAGG+TGG | 0.516993 | 6.1:-924156 | MS.gene82828:CDS |
| GGTGCAGGTGCTGCTGCTGG+CGG | 0.517681 | 6.1:-924264 | MS.gene82828:CDS |
| AGTGAGTTTGCTGGGTATGG+TGG | 0.521591 | 6.1:-924429 | MS.gene82828:CDS |
| TATGGGGCATATGGTGGTGC+CGG | 0.522681 | 6.1:-924285 | MS.gene82828:CDS |
| AGGTCTTCATACGGCAGTGG+TGG | 0.534842 | 6.1:-924564 | MS.gene82828:CDS |
| TTTGTAGGTGGAAATCAAGA+AGG | 0.536506 | 6.1:-924643 | MS.gene82828:intron |
| TTTCCTGTCCTTCATGATGA+CGG | 0.536726 | 6.1:+926651 | None:intergenic |
| AACAGCTTCCTCAGTGTCAA+AGG | 0.539442 | 6.1:+925693 | None:intergenic |
| GGTGACAAACCCAAAGCCAC+GGG | 0.545103 | 6.1:+925714 | None:intergenic |
| CCGGTGATGGTGCTAGTCCT+GGG | 0.546469 | 6.1:-927649 | MS.gene82828:intron |
| AGAGGTGGATATGGTGGTGC+TGG | 0.548922 | 6.1:-924141 | MS.gene82828:CDS |
| TCATTGTAGCGCTTGGATGA+TGG | 0.553767 | 6.1:+924591 | None:intergenic |
| ACTATACCAAGGGGAGCTGT+TGG | 0.556055 | 6.1:-926394 | MS.gene82828:CDS |
| TACTTACGCTGATCCATCTG+TGG | 0.556359 | 6.1:-926599 | MS.gene82828:CDS |
| GATCCTTCTCTAGCATATGC+AGG | 0.559447 | 6.1:-924372 | MS.gene82828:CDS |
| GCTATGGAAGTGAGTTTGCT+GGG | 0.562673 | 6.1:-924437 | MS.gene82828:CDS |
| CGACCTGCATATGCTAGAGA+AGG | 0.563559 | 6.1:+924369 | None:intergenic |
| ATTCCGTCATCATGAAGGAC+AGG | 0.564200 | 6.1:-926654 | MS.gene82828:CDS |
| TTAGAGCCAACAGCTCCCCT+TGG | 0.565841 | 6.1:+926388 | None:intergenic |
| TAGAGAAGGATCTCCTCTGT+AGG | 0.567608 | 6.1:+924383 | None:intergenic |
| GGTAGGGGTGGTCCGTATGG+TGG | 0.570641 | 6.1:-924459 | MS.gene82828:CDS |
| GAGAGTTATGGGGCATATGG+TGG | 0.571800 | 6.1:-924291 | MS.gene82828:CDS |
| TATTATAGGTTGAGATTAAG+CGG | 0.572111 | 6.1:-926417 | MS.gene82828:intron |
| TGGATATGCTGGAGCAATGG+GGG | 0.572776 | 6.1:-924409 | MS.gene82828:CDS |
| GATGCTTATGATGGATTTGG+TGG | 0.573529 | 6.1:-924534 | MS.gene82828:CDS |
| CCAAGTCCGCCATACCCACT+AGG | 0.573852 | 6.1:+924315 | None:intergenic |
| GGGTATGGAGATGCTTATGA+TGG | 0.574308 | 6.1:-924543 | MS.gene82828:CDS |
| AGAGAAGGATCTCCTCTGTA+GGG | 0.575562 | 6.1:+924384 | None:intergenic |
| GCTGGTCGATATCATCCGTA+TGG | 0.577226 | 6.1:-924123 | MS.gene82828:CDS |
| CCCAGGACTAGCACCATCAC+CGG | 0.580888 | 6.1:+927649 | None:intergenic |
| TTAGCGAGAGAAACAACCAT+TGG | 0.581368 | 6.1:-926856 | MS.gene82828:intron |
| TACCGATTCCGTCATCATGA+AGG | 0.584211 | 6.1:-926659 | MS.gene82828:CDS |
| TATGATGCCAGCCTTGGTGG+TGG | 0.584749 | 6.1:-924204 | MS.gene82828:CDS |
| AGTGGCTATGATGCCAGCCT+TGG | 0.586563 | 6.1:-924210 | MS.gene82828:CDS |
| ACTAGCACCATCACCGGTAA+GGG | 0.588535 | 6.1:+927655 | None:intergenic |
| TGCAGAAAGATATTCATAGG+AGG | 0.590460 | 6.1:-926880 | MS.gene82828:intron |
| GCTTATGATGGATTTGGTGG+CGG | 0.594491 | 6.1:-924531 | MS.gene82828:CDS |
| AGCCTTGGTGGTGGATATGG+AGG | 0.594660 | 6.1:-924195 | MS.gene82828:CDS |
| ATAACTGCCTATCTTCCATA+CGG | 0.597392 | 6.1:+924108 | None:intergenic |
| ATGACTTTATCAACCACAGA+TGG | 0.599744 | 6.1:+926586 | None:intergenic |
| GCATATGCAGGTCGTTATGG+TGG | 0.601840 | 6.1:-924360 | MS.gene82828:CDS |
| GGATATGCTGGAGCAATGGG+GGG | 0.602473 | 6.1:-924408 | MS.gene82828:CDS |
| ATTCCTTCAAATGTGACTGA+AGG | 0.608271 | 6.1:-926331 | MS.gene82828:intron |
| TCAAGGTCTTCATACGGCAG+TGG | 0.608782 | 6.1:-924567 | MS.gene82828:CDS |
| GGTCTTCATACGGCAGTGGT+GGG | 0.610806 | 6.1:-924563 | MS.gene82828:CDS |
| AGGTGACAAACCCAAAGCCA+CGG | 0.611432 | 6.1:+925713 | None:intergenic |
| TCACTTCCATAGCCACCATA+CGG | 0.613738 | 6.1:+924447 | None:intergenic |
| CACGGGAACGATTAGTAGAG+TGG | 0.622142 | 6.1:+925731 | None:intergenic |
| CACTCTACTAATCGTTCCCG+TGG | 0.622149 | 6.1:-925730 | MS.gene82828:CDS |
| ACAAAGAAAATATTTGTAGG+TGG | 0.622507 | 6.1:-926355 | MS.gene82828:CDS |
| TAGCGCTTGGATGATGGAGG+TGG | 0.622852 | 6.1:+924597 | None:intergenic |
| GCAGAGGCTATGATCCTAGT+GGG | 0.624317 | 6.1:-924329 | MS.gene82828:CDS |
| AGGTCTGGCAGTGCTTATGG+TGG | 0.626132 | 6.1:-924480 | MS.gene82828:CDS |
| GCTTCCTTCTATGGAAGCAG+AGG | 0.626636 | 6.1:-924159 | MS.gene82828:CDS |
| AATGACTCAAGGTCTTCATA+CGG | 0.631517 | 6.1:-924573 | MS.gene82828:CDS |
| AGCAGAGGCTATGATCCTAG+TGG | 0.638315 | 6.1:-924330 | MS.gene82828:CDS |
| GTGGATATGCTGGAGCAATG+GGG | 0.652433 | 6.1:-924410 | MS.gene82828:CDS |
| GATTAAGCGGACTATACCAA+GGG | 0.652459 | 6.1:-926404 | MS.gene82828:CDS |
| CCAAGCGCTACAATGACTCA+AGG | 0.653309 | 6.1:-924584 | MS.gene82828:CDS |
| GGATATGGAGGAGCTGCTAG+TGG | 0.657229 | 6.1:-924183 | MS.gene82828:CDS |
| AGATTAAGCGGACTATACCA+AGG | 0.658644 | 6.1:-926405 | MS.gene82828:CDS |
| AGGAAAACTGGACAGCCTCG+TGG | 0.661946 | 6.1:-926634 | MS.gene82828:CDS |
| CGGACTTGGTGAGAGTTATG+GGG | 0.662580 | 6.1:-924301 | MS.gene82828:CDS |
| GGAAGCAGAGGTGGATATGG+TGG | 0.673211 | 6.1:-924147 | MS.gene82828:CDS |
| TTGATGATCTTCTATCTATG+GGG | 0.678329 | 6.1:-925672 | MS.gene82828:CDS |
| TATGGTGGAAGCTTTAGCAG+AGG | 0.678683 | 6.1:-924345 | MS.gene82828:CDS |
| TTGTAGCGCTTGGATGATGG+AGG | 0.684955 | 6.1:+924594 | None:intergenic |
| GGTGCTGGTGCATATCAAAG+TGG | 0.687932 | 6.1:-924228 | MS.gene82828:CDS |
| GTTTGTCACCTTTGACACTG+AGG | 0.693348 | 6.1:-925701 | MS.gene82828:CDS |
| GATCACATCATTGGAACCGG+AGG | 0.709097 | 6.1:-927743 | MS.gene82828:CDS |
| TATGATCCTAGTGGGTATGG+CGG | 0.710234 | 6.1:-924321 | MS.gene82828:CDS |
| CTCCTCCATATCCACCACCA+AGG | 0.716948 | 6.1:+924193 | None:intergenic |
| TGTGGTTGATAAAGTCATCG+AGG | 0.733944 | 6.1:-926581 | MS.gene82828:CDS |
| GTAATAAACCCAAATCCACG+AGG | 0.759757 | 6.1:+926619 | None:intergenic |
| ATTAAGCGGACTATACCAAG+GGG | 0.765303 | 6.1:-926403 | MS.gene82828:CDS |
| GGAGGTGAACAAAACGACGT+CGG | 0.768962 | 6.1:-927725 | MS.gene82828:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATGAAAAAATCAAAAA+GGG | + | chr6.1:924269-924288 | None:intergenic | 10.0% |
| !! | TTCAATTAAATATAAGTAAA+GGG | - | chr6.1:924472-924491 | MS.gene82828:CDS | 10.0% |
| !!! | AATTTGATCTTAATTATTTT+AGG | - | chr6.1:925074-925093 | MS.gene82828:intron | 10.0% |
| !!! | ATTTGATCTTAATTATTTTA+GGG | - | chr6.1:925075-925094 | MS.gene82828:intron | 10.0% |
| !!! | GAAAAAAACTTTAAAATATA+CGG | + | chr6.1:925818-925837 | None:intergenic | 10.0% |
| !!! | TTATAAAGATTCAATTTTTA+GGG | - | chr6.1:924327-924346 | MS.gene82828:CDS | 10.0% |
| !!! | TTTATAAAGATTCAATTTTT+AGG | - | chr6.1:924326-924345 | MS.gene82828:CDS | 10.0% |
| !! | AAGAAAATAAAACAAAAATC+TGG | + | chr6.1:927169-927188 | None:intergenic | 15.0% |
| !! | ACTTTACTATTTATGTAAAT+AGG | - | chr6.1:926655-926674 | MS.gene82828:CDS | 15.0% |
| !! | AGAAAATAAAACAAAAATCT+GGG | + | chr6.1:927168-927187 | None:intergenic | 15.0% |
| !! | ATAATGAAAAAATCAAAAAG+GGG | + | chr6.1:924268-924287 | None:intergenic | 15.0% |
| !! | ATTAAAAAAAATGTAACTCA+GGG | + | chr6.1:926489-926508 | None:intergenic | 15.0% |
| !! | ATTATATAGTGTTAAGTTAA+TGG | - | chr6.1:925401-925420 | MS.gene82828:intron | 15.0% |
| !! | CTTCAATTAAATATAAGTAA+AGG | - | chr6.1:924471-924490 | MS.gene82828:CDS | 15.0% |
| !! | GAATAATGAAAAAATCAAAA+AGG | + | chr6.1:924270-924289 | None:intergenic | 15.0% |
| !! | TATTAAAAAAAATGTAACTC+AGG | + | chr6.1:926490-926509 | None:intergenic | 15.0% |
| !!! | TATTTGTTAATTGATGAATT+GGG | - | chr6.1:924290-924309 | MS.gene82828:CDS | 15.0% |
| !!! | TTTCAATTTAGAGATTATTT+TGG | - | chr6.1:926394-926413 | MS.gene82828:CDS | 15.0% |
| !! | AAAAAAATGATTGTAACTCA+AGG | + | chr6.1:927100-927119 | None:intergenic | 20.0% |
| !! | AAAACCAAGATTAACATTAT+TGG | + | chr6.1:926768-926787 | None:intergenic | 20.0% |
| !! | AAAATGTAACGAAAAAATGA+TGG | + | chr6.1:927143-927162 | None:intergenic | 20.0% |
| !! | AATAGGAAATTAAGAAATCA+TGG | - | chr6.1:926672-926691 | MS.gene82828:CDS | 20.0% |
| !! | AATTTATAACTGTTCAATGT+TGG | - | chr6.1:924534-924553 | MS.gene82828:CDS | 20.0% |
| !! | ACGGTATACTAAAAAAATAT+GGG | + | chr6.1:925799-925818 | None:intergenic | 20.0% |
| !! | AGACATACATAATATTTGTA+TGG | - | chr6.1:925863-925882 | MS.gene82828:intron | 20.0% |
| !! | ATATAATACAACAATGTCTT+AGG | - | chr6.1:924803-924822 | MS.gene82828:intron | 20.0% |
| !! | ATTGAATAATGTATCAATGA+AGG | + | chr6.1:927021-927040 | None:intergenic | 20.0% |
| !! | ATTTATAACTGTTCAATGTT+GGG | - | chr6.1:924535-924554 | MS.gene82828:CDS | 20.0% |
| !! | TACGGTATACTAAAAAAATA+TGG | + | chr6.1:925800-925819 | None:intergenic | 20.0% |
| !! | TTAATGAACAAACAAACTTA+TGG | + | chr6.1:926531-926550 | None:intergenic | 20.0% |
| !! | TTCAATTTATCATGTAAATC+TGG | - | chr6.1:927035-927054 | MS.gene82828:intron | 20.0% |
| !! | TTCTTGAAATTGATTATTGT+TGG | - | chr6.1:926699-926718 | MS.gene82828:CDS | 20.0% |
| !!! | AAATAATTTTCATTGTCCAT+AGG | + | chr6.1:925680-925699 | None:intergenic | 20.0% |
| !!! | AATAATTTTCATTGTCCATA+GGG | + | chr6.1:925679-925698 | None:intergenic | 20.0% |
| !!! | ATAATGTTAATCTTGGTTTT+TGG | - | chr6.1:926768-926787 | MS.gene82828:intron | 20.0% |
| !!! | CCAAAATTAAGTTTTTGATT+TGG | - | chr6.1:925974-925993 | MS.gene82828:intron | 20.0% |
| !!! | CCAAATCAAAAACTTAATTT+TGG | + | chr6.1:925977-925996 | None:intergenic | 20.0% |
| !!! | CTATTTGTTAATTGATGAAT+TGG | - | chr6.1:924289-924308 | MS.gene82828:CDS | 20.0% |
| !!! | GATGCTAATATTTTTAGATT+TGG | - | chr6.1:924962-924981 | MS.gene82828:intron | 20.0% |
| !!! | GTTATAAATTGATTTTTTCG+AGG | + | chr6.1:924524-924543 | None:intergenic | 20.0% |
| !!! | GTTTTGGGATTATATATTAT+AGG | - | chr6.1:925446-925465 | MS.gene82828:intron | 20.0% |
| !!! | TAAGTTTGTTTGTTCATTAA+TGG | - | chr6.1:926531-926550 | MS.gene82828:intron | 20.0% |
| ! | AAACAATATCAACAAAAGCA+AGG | + | chr6.1:926041-926060 | None:intergenic | 25.0% |
| ! | AATTTATCATGTAAATCTGG+AGG | - | chr6.1:927038-927057 | MS.gene82828:intron | 25.0% |
| ! | ACAAAGAAAATATTTGTAGG+TGG | - | chr6.1:925522-925541 | MS.gene82828:intron | 25.0% |
| ! | ACAAATCACCAAAATTCAAA+GGG | + | chr6.1:925109-925128 | None:intergenic | 25.0% |
| ! | ACCCAATAAAAAATGAATCT+CGG | + | chr6.1:926794-926813 | None:intergenic | 25.0% |
| ! | AGGACAAAGAAAATATTTGT+AGG | - | chr6.1:925519-925538 | MS.gene82828:intron | 25.0% |
| ! | ATTTGCAGAAAGATATTCAT+AGG | - | chr6.1:924994-925013 | MS.gene82828:intron | 25.0% |
| ! | CAACATATATAATAGGTCAT+AGG | - | chr6.1:926311-926330 | MS.gene82828:intron | 25.0% |
| ! | CATACATAATATTTGTATGG+TGG | - | chr6.1:925866-925885 | MS.gene82828:intron | 25.0% |
| ! | GAATATCTTTCTGCAAATTA+TGG | + | chr6.1:924992-925011 | None:intergenic | 25.0% |
| ! | TAAATAGTAAAGTCAAAGCA+TGG | + | chr6.1:926648-926667 | None:intergenic | 25.0% |
| ! | TACAAATCACCAAAATTCAA+AGG | + | chr6.1:925110-925129 | None:intergenic | 25.0% |
| ! | TCCAATTCTACAATTTATCA+GGG | + | chr6.1:924735-924754 | None:intergenic | 25.0% |
| ! | TCTTAAATTCAAGTGTTTAC+TGG | - | chr6.1:927068-927087 | MS.gene82828:intron | 25.0% |
| ! | TTCCAATTCTACAATTTATC+AGG | + | chr6.1:924736-924755 | None:intergenic | 25.0% |
| ! | TTGAAGGAATTGATTATTGT+TGG | + | chr6.1:926607-926626 | None:intergenic | 25.0% |
| ! | TTGCACACAACATATATAAT+AGG | - | chr6.1:926304-926323 | MS.gene82828:intron | 25.0% |
| !! | AATTGACTTCAAAATCTTGT+GGG | - | chr6.1:926365-926384 | MS.gene82828:CDS | 25.0% |
| !! | CTTTGTTATCTTTACTTTGT+AGG | - | chr6.1:927219-927238 | MS.gene82828:intron | 25.0% |
| !! | TAATTGACTTCAAAATCTTG+TGG | - | chr6.1:926364-926383 | MS.gene82828:CDS | 25.0% |
| !! | TATTATAGGTTGAGATTAAG+CGG | - | chr6.1:925460-925479 | MS.gene82828:intron | 25.0% |
| !!! | ATTATTCTGTTTGTTTTCTG+AGG | - | chr6.1:924383-924402 | MS.gene82828:CDS | 25.0% |
| !!! | TATTGATTTCTTACCTGTTT+CGG | - | chr6.1:925138-925157 | MS.gene82828:intron | 25.0% |
| !!! | TTGTTATTCCCTTTGAATTT+TGG | - | chr6.1:925098-925117 | MS.gene82828:intron | 25.0% |
| AAACAAACTTATGGAAGAGT+TGG | + | chr6.1:926522-926541 | None:intergenic | 30.0% | |
| AAATATGCTGAAGCTACTAT+AGG | - | chr6.1:926848-926867 | MS.gene82828:intron | 30.0% | |
| AACAAACTTATGGAAGAGTT+GGG | + | chr6.1:926521-926540 | None:intergenic | 30.0% | |
| AACCATGTTTCTTTCTTCTT+TGG | - | chr6.1:926896-926915 | MS.gene82828:intron | 30.0% | |
| ACCAAAAAAACACAAGTAGA+AGG | + | chr6.1:926935-926954 | None:intergenic | 30.0% | |
| AGAGCTTACTTGAAAATATG+AGG | - | chr6.1:925652-925671 | MS.gene82828:CDS | 30.0% | |
| AGGGTTTCATTCATAGAAAA+GGG | - | chr6.1:924346-924365 | MS.gene82828:CDS | 30.0% | |
| ATAGGATAAACGCCAATAAT+GGG | - | chr6.1:926329-926348 | MS.gene82828:intron | 30.0% | |
| ATCAAGCACTTTGGTAAATA+TGG | - | chr6.1:925189-925208 | MS.gene82828:intron | 30.0% | |
| CATAAAATAGACCCAACAAA+TGG | - | chr6.1:926013-926032 | MS.gene82828:intron | 30.0% | |
| CATAACAGACCAAAGTATAT+TGG | + | chr6.1:926738-926757 | None:intergenic | 30.0% | |
| CGTTATGTTAAAATGGCATT+TGG | - | chr6.1:926422-926441 | MS.gene82828:intron | 30.0% | |
| CTTTGATTATTGATGCTTGA+AGG | + | chr6.1:926623-926642 | None:intergenic | 30.0% | |
| GATTGACAACCAATATACTT+TGG | - | chr6.1:926726-926745 | MS.gene82828:intron | 30.0% | |
| GTGTCCAATAATGTTAATCT+TGG | - | chr6.1:926761-926780 | MS.gene82828:intron | 30.0% | |
| TAAAATCCTATGCAAAGACA+TGG | + | chr6.1:925367-925386 | None:intergenic | 30.0% | |
| TAGGGTTTCATTCATAGAAA+AGG | - | chr6.1:924345-924364 | MS.gene82828:CDS | 30.0% | |
| TCCCTGATAAATTGTAGAAT+TGG | - | chr6.1:924731-924750 | MS.gene82828:intron | 30.0% | |
| TGTTATCTTTACTTTGTAGG+TGG | - | chr6.1:927222-927241 | MS.gene82828:intron | 30.0% | |
| ! | ACAAAAAACCAGTTTTCTAG+AGG | + | chr6.1:924648-924667 | None:intergenic | 30.0% |
| ! | ACCAAAGTGCTTGATAAATT+GGG | + | chr6.1:925184-925203 | None:intergenic | 30.0% |
| ! | GAATCATGACTGAAGATTTT+TGG | - | chr6.1:926569-926588 | MS.gene82828:CDS | 30.0% |
| ! | GATAGAAAACAGTTGATGTT+TGG | - | chr6.1:926444-926463 | MS.gene82828:intron | 30.0% |
| ! | TAAGTTAATGGATACATAGC+TGG | - | chr6.1:925413-925432 | MS.gene82828:intron | 30.0% |
| ! | TACCAAAGTGCTTGATAAAT+TGG | + | chr6.1:925185-925204 | None:intergenic | 30.0% |
| ! | TTGATGATCTTCTATCTATG+GGG | - | chr6.1:926205-926224 | MS.gene82828:intron | 30.0% |
| !! | AATATAAACTGATTTGCTCG+AGG | + | chr6.1:924876-924895 | None:intergenic | 30.0% |
| !! | AATTTTTCGATGATTGACTG+AGG | - | chr6.1:925594-925613 | MS.gene82828:intron | 30.0% |
| !! | ATTCAACGTTGTTTCTTAAG+CGG | - | chr6.1:925717-925736 | MS.gene82828:CDS | 30.0% |
| !! | GTTGATGATCTTCTATCTAT+GGG | - | chr6.1:926204-926223 | MS.gene82828:intron | 30.0% |
| !! | TGTTGATGATCTTCTATCTA+TGG | - | chr6.1:926203-926222 | MS.gene82828:intron | 30.0% |
| !!! | ACCTTCTACTTGTGTTTTTT+TGG | - | chr6.1:926931-926950 | MS.gene82828:intron | 30.0% |
| !!! | GCCGAGATTCATTTTTTATT+GGG | - | chr6.1:926790-926809 | MS.gene82828:intron | 30.0% |
| !!! | GTTTTTTTCCTCTAGAAAAC+TGG | - | chr6.1:924637-924656 | MS.gene82828:CDS | 30.0% |
| !!! | TGCCATTTTAACATAACGTT+AGG | + | chr6.1:926420-926439 | None:intergenic | 30.0% |
| !!! | TTCTACTTGTGTTTTTTTGG+TGG | - | chr6.1:926934-926953 | MS.gene82828:intron | 30.0% |
| !!! | TTTTAGGGTATCTGAGAAAA+GGG | - | chr6.1:924439-924458 | MS.gene82828:CDS | 30.0% |
| !!! | TTTTTAGGGTATCTGAGAAA+AGG | - | chr6.1:924438-924457 | MS.gene82828:CDS | 30.0% |
| AAAAGCAAGGTTCCATTTGT+TGG | + | chr6.1:926028-926047 | None:intergenic | 35.0% | |
| AAAGCAAGGTTCCATTTGTT+GGG | + | chr6.1:926027-926046 | None:intergenic | 35.0% | |
| AATGACTCAAGGTCTTCATA+CGG | - | chr6.1:927304-927323 | MS.gene82828:intron | 35.0% | |
| AGAATTGGAACCTTGAGAAA+AGG | - | chr6.1:924746-924765 | MS.gene82828:intron | 35.0% | |
| ATGACTTTATCAACCACAGA+TGG | + | chr6.1:925294-925313 | None:intergenic | 35.0% | |
| ATTCCTTCAAATGTGACTGA+AGG | - | chr6.1:925546-925565 | MS.gene82828:intron | 35.0% | |
| ATTGACTGAGGTTATCACTT+AGG | - | chr6.1:925606-925625 | MS.gene82828:intron | 35.0% | |
| ATTTCTTACCTGTTTCGGAT+GGG | - | chr6.1:925143-925162 | MS.gene82828:intron | 35.0% | |
| CAGTAATCATAGCCCATTAT+TGG | + | chr6.1:926344-926363 | None:intergenic | 35.0% | |
| CATAGGATAAACGCCAATAA+TGG | - | chr6.1:926328-926347 | MS.gene82828:intron | 35.0% | |
| CTCCAAAGAAGAAAGAAACA+TGG | + | chr6.1:926901-926920 | None:intergenic | 35.0% | |
| GAATTGGAACCTTGAGAAAA+GGG | - | chr6.1:924747-924766 | MS.gene82828:intron | 35.0% | |
| GGCCTAACGTTATGTTAAAA+TGG | - | chr6.1:926415-926434 | MS.gene82828:intron | 35.0% | |
| GGGTTTCATTCATAGAAAAG+GGG | - | chr6.1:924347-924366 | MS.gene82828:CDS | 35.0% | |
| TGCAGAAAGATATTCATAGG+AGG | - | chr6.1:924997-925016 | MS.gene82828:intron | 35.0% | |
| TTGAAAATATGAGGACCCTA+TGG | - | chr6.1:925661-925680 | MS.gene82828:CDS | 35.0% | |
| TTGTGTGCAAATTACAACAG+TGG | + | chr6.1:926294-926313 | None:intergenic | 35.0% | |
| TTTCTACCATGTCTTTGCAT+AGG | - | chr6.1:925358-925377 | MS.gene82828:intron | 35.0% | |
| TTTGTAGGTGGAAATCAAGA+AGG | - | chr6.1:927234-927253 | MS.gene82828:intron | 35.0% | |
| ! | ACAAAAAGACCCTTTTCTCA+AGG | + | chr6.1:924759-924778 | None:intergenic | 35.0% |
| ! | ATACATAGCTGGCTCTTATA+TGG | - | chr6.1:925424-925443 | MS.gene82828:intron | 35.0% |
| ! | TCCAATGATGTGATCGTTTT+TGG | + | chr6.1:924129-924148 | None:intergenic | 35.0% |
| !! | ACTGAGCTTTGAAGAAACAA+AGG | + | chr6.1:925925-925944 | None:intergenic | 35.0% |
| !! | CCAATGATGTGATCGTTTTT+GGG | + | chr6.1:924128-924147 | None:intergenic | 35.0% |
| !! | TTCAACGTTGTTTCTTAAGC+GGG | - | chr6.1:925718-925737 | MS.gene82828:CDS | 35.0% |
| !!! | CTAGTTCTCTTTGTTTTCTG+AGG | - | chr6.1:924575-924594 | MS.gene82828:CDS | 35.0% |
| !!! | GGCCGAGATTCATTTTTTAT+TGG | - | chr6.1:926789-926808 | MS.gene82828:intron | 35.0% |
| !!! | TACTTGTGTTTTTTTGGTGG+TGG | - | chr6.1:926937-926956 | MS.gene82828:intron | 35.0% |
| !!! | TTTTCAAGTAAGCTCTCTCA+CGG | + | chr6.1:925648-925667 | None:intergenic | 35.0% |
| !!! | TTTTGGTGGTGGATTTCATT+GGG | - | chr6.1:926948-926967 | MS.gene82828:intron | 35.0% |
| !!! | TTTTTGGTGGTGGATTTCAT+TGG | - | chr6.1:926947-926966 | MS.gene82828:intron | 35.0% |
| AACGATCACATCATTGGAAC+CGG | - | chr6.1:924131-924150 | MS.gene82828:CDS | 40.0% | |
| ACAAAGCAAGCACTAACCAA+TGG | + | chr6.1:925040-925059 | None:intergenic | 40.0% | |
| AGGCAACAAACTCTTGCAAA+TGG | + | chr6.1:927001-927020 | None:intergenic | 40.0% | |
| ATCATGAAGGACAGGAAAAC+TGG | - | chr6.1:925231-925250 | MS.gene82828:intron | 40.0% | |
| CATAACTCTCAATCCCTTAC+CGG | - | chr6.1:924209-924228 | MS.gene82828:CDS | 40.0% | |
| CCCAAAAACGATCACATCAT+TGG | - | chr6.1:924125-924144 | MS.gene82828:CDS | 40.0% | |
| CTACCTTCAGTCACATTTGA+AGG | + | chr6.1:925552-925571 | None:intergenic | 40.0% | |
| CTTCAAATGTGACTGAAGGT+AGG | - | chr6.1:925550-925569 | MS.gene82828:intron | 40.0% | |
| GATTTCTTACCTGTTTCGGA+TGG | - | chr6.1:925142-925161 | MS.gene82828:intron | 40.0% | |
| GCAACAAACTCTTGCAAATG+GGG | + | chr6.1:926999-927018 | None:intergenic | 40.0% | |
| GCCCAATTTATCAAGCACTT+TGG | - | chr6.1:925180-925199 | MS.gene82828:intron | 40.0% | |
| GGCAACAAACTCTTGCAAAT+GGG | + | chr6.1:927000-927019 | None:intergenic | 40.0% | |
| GTAATAAACCCAAATCCACG+AGG | + | chr6.1:925261-925280 | None:intergenic | 40.0% | |
| TAAGCGGGAGATTACTGTTT+AGG | - | chr6.1:925733-925752 | MS.gene82828:CDS | 40.0% | |
| TAGAGTGGTCACGCATTATT+TGG | + | chr6.1:926134-926153 | None:intergenic | 40.0% | |
| TTAGCGAGAGAAACAACCAT+TGG | - | chr6.1:925021-925040 | MS.gene82828:intron | 40.0% | |
| TTTCCTGTCCTTCATGATGA+CGG | + | chr6.1:925229-925248 | None:intergenic | 40.0% | |
| ! | CAGTTGATGTTTGGCTTCTT+TGG | - | chr6.1:926453-926472 | MS.gene82828:intron | 40.0% |
| !! | AGATTAAGCGGACTATACCA+AGG | - | chr6.1:925472-925491 | MS.gene82828:intron | 40.0% |
| !! | AGCTGGCTCTTATATGGTTT+TGG | - | chr6.1:925430-925449 | MS.gene82828:intron | 40.0% |
| !! | ATTAAGCGGACTATACCAAG+GGG | - | chr6.1:925474-925493 | MS.gene82828:intron | 40.0% |
| !! | GATGCTTATGATGGATTTGG+TGG | - | chr6.1:927343-927362 | MS.gene82828:intron | 40.0% |
| !! | GATTAAGCGGACTATACCAA+GGG | - | chr6.1:925473-925492 | MS.gene82828:intron | 40.0% |
| !! | GCTGGCTCTTATATGGTTTT+GGG | - | chr6.1:925431-925450 | MS.gene82828:intron | 40.0% |
| !! | GCTTTGAAGAAACAAAGGTG+TGG | + | chr6.1:925920-925939 | None:intergenic | 40.0% |
| !! | GGAGATGCTTATGATGGATT+TGG | - | chr6.1:927340-927359 | MS.gene82828:intron | 40.0% |
| !! | TGTGGTTGATAAAGTCATCG+AGG | - | chr6.1:925296-925315 | MS.gene82828:intron | 40.0% |
| !! | TTTGGTGGTGGATTTCATTG+GGG | - | chr6.1:926949-926968 | MS.gene82828:intron | 40.0% |
| !!! | AGAGATTTTTTCACGCGCTA+TGG | - | chr6.1:926093-926112 | MS.gene82828:intron | 40.0% |
| !!! | CTGTTGGCTCTAAGGATTTT+AGG | - | chr6.1:925499-925518 | MS.gene82828:intron | 40.0% |
| AACAGCTTCCTCAGTGTCAA+AGG | + | chr6.1:926187-926206 | None:intergenic | 45.0% | |
| ACACAAAACCCATCCGAAAC+AGG | + | chr6.1:925154-925173 | None:intergenic | 45.0% | |
| AGAGAAGGATCTCCTCTGTA+GGG | + | chr6.1:927496-927515 | None:intergenic | 45.0% | |
| ATTCCGTCATCATGAAGGAC+AGG | - | chr6.1:925223-925242 | MS.gene82828:intron | 45.0% | |
| CAAGAAGGCTGAACCAAAGA+AGG | - | chr6.1:927249-927268 | MS.gene82828:intron | 45.0% | |
| CTAGCATATGCAGGTCGTTA+TGG | - | chr6.1:927514-927533 | MS.gene82828:intron | 45.0% | |
| CTTGCAAATGGGGTCATGTT+GGG | + | chr6.1:926989-927008 | None:intergenic | 45.0% | |
| GACTGAGGTTATCACTTAGG+CGG | - | chr6.1:925609-925628 | MS.gene82828:intron | 45.0% | |
| GATCCTTCTCTAGCATATGC+AGG | - | chr6.1:927505-927524 | MS.gene82828:intron | 45.0% | |
| GGGAACAAGATTGAGTTTGC+TGG | - | chr6.1:926225-926244 | MS.gene82828:intron | 45.0% | |
| GGGTATGGAGATGCTTATGA+TGG | - | chr6.1:927334-927353 | MS.gene82828:intron | 45.0% | |
| GTTTGTCACCTTTGACACTG+AGG | - | chr6.1:926176-926195 | MS.gene82828:intron | 45.0% | |
| TACTTACGCTGATCCATCTG+TGG | - | chr6.1:925278-925297 | MS.gene82828:intron | 45.0% | |
| TAGAGAAGGATCTCCTCTGT+AGG | + | chr6.1:927497-927516 | None:intergenic | 45.0% | |
| TATGGAAGCAGAGGTGGATA+TGG | - | chr6.1:927727-927746 | MS.gene82828:CDS | 45.0% | |
| TCACTTCCATAGCCACCATA+CGG | + | chr6.1:927433-927452 | None:intergenic | 45.0% | |
| TCATTGTAGCGCTTGGATGA+TGG | + | chr6.1:927289-927308 | None:intergenic | 45.0% | |
| TCTTGCAAATGGGGTCATGT+TGG | + | chr6.1:926990-927009 | None:intergenic | 45.0% | |
| ! | GCTATGGAAGTGAGTTTGCT+GGG | - | chr6.1:927440-927459 | MS.gene82828:intron | 45.0% |
| ! | TATGATCCTAGTGGGTATGG+CGG | - | chr6.1:927556-927575 | MS.gene82828:intron | 45.0% |
| ! | TATGGTGGAAGCTTTAGCAG+AGG | - | chr6.1:927532-927551 | MS.gene82828:intron | 45.0% |
| !! | GCTTATGATGGATTTGGTGG+CGG | - | chr6.1:927346-927365 | MS.gene82828:intron | 45.0% |
| !! | GTCCTTCATGATGACGGAAT+CGG | + | chr6.1:925223-925242 | None:intergenic | 45.0% |
| !! | TACCGATTCCGTCATCATGA+AGG | - | chr6.1:925218-925237 | MS.gene82828:intron | 45.0% |
| !!! | TTATAAATATTCAATTTTTA+GGG | - | chr6.1:924424-924443 | MS.gene82828:CDS | 5.0% |
| !!! | TTTATAAATATTCAATTTTT+AGG | - | chr6.1:924423-924442 | MS.gene82828:CDS | 5.0% |
| !!! | TTTATAATAATTCAATTTTT+AGG | - | chr6.1:924615-924634 | MS.gene82828:CDS | 5.0% |
| ACTAATCGTTCCCGTGGCTT+TGG | - | chr6.1:926153-926172 | MS.gene82828:intron | 50.0% | |
| ACTAGCACCATCACCGGTAA+GGG | + | chr6.1:924225-924244 | None:intergenic | 50.0% | |
| ACTATACCAAGGGGAGCTGT+TGG | - | chr6.1:925483-925502 | MS.gene82828:intron | 50.0% | |
| AGCAGAGGCTATGATCCTAG+TGG | - | chr6.1:927547-927566 | MS.gene82828:intron | 50.0% | |
| AGGTGACAAACCCAAAGCCA+CGG | + | chr6.1:926167-926186 | None:intergenic | 50.0% | |
| CACGGGAACGATTAGTAGAG+TGG | + | chr6.1:926149-926168 | None:intergenic | 50.0% | |
| CACTCTACTAATCGTTCCCG+TGG | - | chr6.1:926147-926166 | MS.gene82828:intron | 50.0% | |
| CCAAGCGCTACAATGACTCA+AGG | - | chr6.1:927293-927312 | MS.gene82828:intron | 50.0% | |
| CCTTGAGTCATTGTAGCGCT+TGG | + | chr6.1:927296-927315 | None:intergenic | 50.0% | |
| CGACCTGCATATGCTAGAGA+AGG | + | chr6.1:927511-927530 | None:intergenic | 50.0% | |
| CTAATCGTTCCCGTGGCTTT+GGG | - | chr6.1:926154-926173 | MS.gene82828:intron | 50.0% | |
| GAGAGTTATGGGGCATATGG+TGG | - | chr6.1:927586-927605 | MS.gene82828:intron | 50.0% | |
| GATCACATCATTGGAACCGG+AGG | - | chr6.1:924134-924153 | MS.gene82828:CDS | 50.0% | |
| GCAGAGGCTATGATCCTAGT+GGG | - | chr6.1:927548-927567 | MS.gene82828:intron | 50.0% | |
| GCATATGCAGGTCGTTATGG+TGG | - | chr6.1:927517-927536 | MS.gene82828:intron | 50.0% | |
| GCTAGTGGAGCTTCCTTCTA+TGG | - | chr6.1:927709-927728 | MS.gene82828:CDS | 50.0% | |
| GCTGGTCGATATCATCCGTA+TGG | - | chr6.1:927754-927773 | MS.gene82828:CDS | 50.0% | |
| GCTTCCTTCTATGGAAGCAG+AGG | - | chr6.1:927718-927737 | MS.gene82828:CDS | 50.0% | |
| GGAGGTGAACAAAACGACGT+CGG | - | chr6.1:924152-924171 | MS.gene82828:CDS | 50.0% | |
| GGCTATGGAAGTGAGTTTGC+TGG | - | chr6.1:927439-927458 | MS.gene82828:intron | 50.0% | |
| GGGAAAAGAGAGAGTTACCC+AGG | + | chr6.1:924248-924267 | None:intergenic | 50.0% | |
| GGTGAGAGTTATGGGGCATA+TGG | - | chr6.1:927583-927602 | MS.gene82828:intron | 50.0% | |
| GGTGGATATGCTGGAGCAAT+GGG | - | chr6.1:927466-927485 | MS.gene82828:intron | 50.0% | |
| GGTGGTGCATTTGCCTTCTT+TGG | + | chr6.1:927265-927284 | None:intergenic | 50.0% | |
| GTGGATATGCTGGAGCAATG+GGG | - | chr6.1:927467-927486 | MS.gene82828:intron | 50.0% | |
| TCAAGGTCTTCATACGGCAG+TGG | - | chr6.1:927310-927329 | MS.gene82828:intron | 50.0% | |
| TCCACCTCTGCTTCCATAGA+AGG | + | chr6.1:927725-927744 | None:intergenic | 50.0% | |
| TCCTTCTATGGAAGCAGAGG+TGG | - | chr6.1:927721-927740 | MS.gene82828:CDS | 50.0% | |
| TCTCAATCCCTTACCGGTGA+TGG | - | chr6.1:924215-924234 | MS.gene82828:CDS | 50.0% | |
| TGGATATGCTGGAGCAATGG+GGG | - | chr6.1:927468-927487 | MS.gene82828:intron | 50.0% | |
| TGGCAGTGCTTATGGTGGTA+GGG | - | chr6.1:927402-927421 | MS.gene82828:intron | 50.0% | |
| ! | GGCTATGATCCTAGTGGGTA+TGG | - | chr6.1:927553-927572 | MS.gene82828:intron | 50.0% |
| ! | TGGTGGATATGCTGGAGCAA+TGG | - | chr6.1:927465-927484 | MS.gene82828:intron | 50.0% |
| ! | TTGTAGCGCTTGGATGATGG+AGG | + | chr6.1:927286-927305 | None:intergenic | 50.0% |
| !! | AGTGAGTTTGCTGGGTATGG+TGG | - | chr6.1:927448-927467 | MS.gene82828:intron | 50.0% |
| !! | CGGACTTGGTGAGAGTTATG+GGG | - | chr6.1:927576-927595 | MS.gene82828:intron | 50.0% |
| !! | GACGTCGTTTTGTTCACCTC+CGG | + | chr6.1:924153-924172 | None:intergenic | 50.0% |
| !! | GATGGATTTGGTGGCGGATT+TGG | - | chr6.1:927352-927371 | MS.gene82828:intron | 50.0% |
| !! | GATTGAGTTTGCTGGCACTC+AGG | - | chr6.1:926233-926252 | MS.gene82828:intron | 50.0% |
| !! | GCGGACTTGGTGAGAGTTAT+GGG | - | chr6.1:927575-927594 | MS.gene82828:intron | 50.0% |
| !! | GGAAGTGAGTTTGCTGGGTA+TGG | - | chr6.1:927445-927464 | MS.gene82828:intron | 50.0% |
| !! | GGTGCTGGTGCATATCAAAG+TGG | - | chr6.1:927649-927668 | MS.gene82828:intron | 50.0% |
| ACTGGACAGCCTCGTGGATT+TGG | - | chr6.1:925249-925268 | MS.gene82828:intron | 55.0% | |
| AGCAGGTCTGGCAGTGCTTA+TGG | - | chr6.1:927394-927413 | MS.gene82828:intron | 55.0% | |
| AGGAAAACTGGACAGCCTCG+TGG | - | chr6.1:925243-925262 | MS.gene82828:intron | 55.0% | |
| AGGTCTGGCAGTGCTTATGG+TGG | - | chr6.1:927397-927416 | MS.gene82828:intron | 55.0% | |
| AGGTCTTCATACGGCAGTGG+TGG | - | chr6.1:927313-927332 | MS.gene82828:intron | 55.0% | |
| AGTGCTTATGGTGGTAGGGG+TGG | - | chr6.1:927406-927425 | MS.gene82828:intron | 55.0% | |
| AGTGGCTATGATGCCAGCCT+TGG | - | chr6.1:927667-927686 | MS.gene82828:CDS | 55.0% | |
| CTCCTCCATATCCACCACCA+AGG | + | chr6.1:927687-927706 | None:intergenic | 55.0% | |
| CTGGACAGCCTCGTGGATTT+GGG | - | chr6.1:925250-925269 | MS.gene82828:intron | 55.0% | |
| CTGGCAGTGCTTATGGTGGT+AGG | - | chr6.1:927401-927420 | MS.gene82828:intron | 55.0% | |
| GACTAGCACCATCACCGGTA+AGG | + | chr6.1:924226-924245 | None:intergenic | 55.0% | |
| GGAAGCAGAGGTGGATATGG+TGG | - | chr6.1:927730-927749 | MS.gene82828:CDS | 55.0% | |
| GGATATGCTGGAGCAATGGG+GGG | - | chr6.1:927469-927488 | MS.gene82828:intron | 55.0% | |
| GGATATGGAGGAGCTGCTAG+TGG | - | chr6.1:927694-927713 | MS.gene82828:CDS | 55.0% | |
| GGCAGTGCTTATGGTGGTAG+GGG | - | chr6.1:927403-927422 | MS.gene82828:intron | 55.0% | |
| GGTCTTCATACGGCAGTGGT+GGG | - | chr6.1:927314-927333 | MS.gene82828:intron | 55.0% | |
| GGTGACAAACCCAAAGCCAC+GGG | + | chr6.1:926166-926185 | None:intergenic | 55.0% | |
| TATGATGCCAGCCTTGGTGG+TGG | - | chr6.1:927673-927692 | MS.gene82828:CDS | 55.0% | |
| TCCATATCCACCACCAAGGC+TGG | + | chr6.1:927683-927702 | None:intergenic | 55.0% | |
| TTAGAGCCAACAGCTCCCCT+TGG | + | chr6.1:925492-925511 | None:intergenic | 55.0% | |
| ! | AGAGGTGGATATGGTGGTGC+TGG | - | chr6.1:927736-927755 | MS.gene82828:CDS | 55.0% |
| ! | TATGGGGCATATGGTGGTGC+CGG | - | chr6.1:927592-927611 | MS.gene82828:intron | 55.0% |
| !! | AAGGGGAGCTGTTGGCTCTA+AGG | - | chr6.1:925491-925510 | MS.gene82828:intron | 55.0% |
| !! | AGCCTTGGTGGTGGATATGG+AGG | - | chr6.1:927682-927701 | MS.gene82828:CDS | 55.0% |
| !! | GCTGGGTATGGTGGATATGC+TGG | - | chr6.1:927457-927476 | MS.gene82828:intron | 55.0% |
| !! | GGATTTGGTGGCGGATTTGG+TGG | - | chr6.1:927355-927374 | MS.gene82828:intron | 55.0% |
| !! | GGCGGACTTGGTGAGAGTTA+TGG | - | chr6.1:927574-927593 | MS.gene82828:intron | 55.0% |
| !! | GTGGCGGATTTGGTGGTGTT+GGG | - | chr6.1:927362-927381 | MS.gene82828:intron | 55.0% |
| !! | TAGCGCTTGGATGATGGAGG+TGG | + | chr6.1:927283-927302 | None:intergenic | 55.0% |
| !! | TCATACGGCAGTGGTGGGTA+TGG | - | chr6.1:927319-927338 | MS.gene82828:intron | 55.0% |
| !! | TGGCGGATTTGGTGGTGTTG+GGG | - | chr6.1:927363-927382 | MS.gene82828:intron | 55.0% |
| CCAAGTCCGCCATACCCACT+AGG | + | chr6.1:927565-927584 | None:intergenic | 60.0% | |
| GGAGGTGGTTCTTCTGGTGC+TGG | - | chr6.1:927634-927653 | MS.gene82828:intron | 60.0% | |
| GGCTATGATGCCAGCCTTGG+TGG | - | chr6.1:927670-927689 | MS.gene82828:CDS | 60.0% | |
| GGTGGTCCGTATGGTGGCTA+TGG | - | chr6.1:927424-927443 | MS.gene82828:intron | 60.0% | |
| GTGTTGGGGGTGGTTACAGC+AGG | - | chr6.1:927377-927396 | MS.gene82828:intron | 60.0% | |
| ! | ACCGGTGATGGTGCTAGTCC+TGG | - | chr6.1:924227-924246 | MS.gene82828:CDS | 60.0% |
| ! | CCCAGGACTAGCACCATCAC+CGG | + | chr6.1:924231-924250 | None:intergenic | 60.0% |
| ! | CCGGTGATGGTGCTAGTCCT+GGG | - | chr6.1:924228-924247 | MS.gene82828:CDS | 60.0% |
| !! | CCTAGTGGGTATGGCGGACT+TGG | - | chr6.1:927562-927581 | MS.gene82828:intron | 60.0% |
| !! | GCCAGCCTTGGTGGTGGATA+TGG | - | chr6.1:927679-927698 | MS.gene82828:CDS | 60.0% |
| !! | GGATTTGGTGGTGTTGGGGG+TGG | - | chr6.1:927367-927386 | MS.gene82828:intron | 60.0% |
| !! | GGCGGATTTGGTGGTGTTGG+GGG | - | chr6.1:927364-927383 | MS.gene82828:intron | 60.0% |
| !! | GGTGGCGGATTTGGTGGTGT+TGG | - | chr6.1:927361-927380 | MS.gene82828:intron | 60.0% |
| GCAATGGGGGGACCCTACAG+AGG | - | chr6.1:927481-927500 | MS.gene82828:intron | 65.0% | |
| GCTGGCGGAGGTGGTTCTTC+TGG | - | chr6.1:927628-927647 | MS.gene82828:intron | 65.0% | |
| GGGGGTGGTTACAGCAGGTC+TGG | - | chr6.1:927382-927401 | MS.gene82828:intron | 65.0% | |
| GGTAGGGGTGGTCCGTATGG+TGG | - | chr6.1:927418-927437 | MS.gene82828:intron | 65.0% | |
| GGTGGTAGGGGTGGTCCGTA+TGG | - | chr6.1:927415-927434 | MS.gene82828:intron | 65.0% | |
| !! | GCATATGGTGGTGCCGGTGC+AGG | - | chr6.1:927598-927617 | MS.gene82828:intron | 65.0% |
| GCCAGCAGCAGCACCTGCAC+CGG | + | chr6.1:927614-927633 | None:intergenic | 70.0% | |
| !! | GGTGCAGGTGCTGCTGCTGG+CGG | - | chr6.1:927613-927632 | MS.gene82828:intron | 70.0% |
| !! | GCAGGTGCTGCTGCTGGCGG+AGG | - | chr6.1:927616-927635 | MS.gene82828:intron | 75.0% |
| !! | GCCGGTGCAGGTGCTGCTGC+TGG | - | chr6.1:927610-927629 | MS.gene82828:intron | 75.0% |
| !! | GGTGCTGCTGCTGGCGGAGG+TGG | - | chr6.1:927619-927638 | MS.gene82828:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 924116 | 927783 | 924116 | ID=MS.gene82828 |
| chr6.1 | mRNA | 924116 | 927783 | 924116 | ID=MS.gene82828.t1;Parent=MS.gene82828 |
| chr6.1 | exon | 927650 | 927783 | 927650 | ID=MS.gene82828.t1.exon1;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 927650 | 927783 | 927650 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| chr6.1 | exon | 926857 | 926897 | 926857 | ID=MS.gene82828.t1.exon2;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 926857 | 926897 | 926857 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| chr6.1 | exon | 926555 | 926718 | 926555 | ID=MS.gene82828.t1.exon3;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 926555 | 926718 | 926555 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| chr6.1 | exon | 926332 | 926431 | 926332 | ID=MS.gene82828.t1.exon4;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 926332 | 926431 | 926332 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| chr6.1 | exon | 925645 | 925814 | 925645 | ID=MS.gene82828.t1.exon5;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 925645 | 925814 | 925645 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| chr6.1 | exon | 924116 | 924658 | 924116 | ID=MS.gene82828.t1.exon6;Parent=MS.gene82828.t1 |
| chr6.1 | CDS | 924116 | 924658 | 924116 | ID=cds.MS.gene82828.t1;Parent=MS.gene82828.t1 |
| Gene Sequence |
| Protein sequence |
