Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038683.t1 | XP_003628644.2 | 96.9 | 487 | 15 | 0 | 1 | 487 | 1 | 487 | 6.90E-269 | 936 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038683.t1 | Q8RWN2 | 56.3 | 481 | 201 | 4 | 8 | 480 | 7 | 486 | 5.2e-156 | 552.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038683.t1 | G7LFE1 | 96.9 | 487 | 15 | 0 | 1 | 487 | 1 | 487 | 5.0e-269 | 936.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038683.t1 | MTR_8g062990 | 97.125 | 487 | 14 | 0 | 1 | 487 | 1 | 487 | 0.0 | 965 |
| MS.gene038683.t1 | MTR_3g010820 | 96.099 | 487 | 19 | 0 | 1 | 487 | 1 | 487 | 0.0 | 962 |
| MS.gene038683.t1 | MTR_8g042770 | 69.672 | 488 | 146 | 2 | 1 | 487 | 1 | 487 | 0.0 | 728 |
| MS.gene038683.t1 | MTR_8g042780 | 69.874 | 478 | 140 | 1 | 10 | 487 | 7 | 480 | 0.0 | 719 |
| MS.gene038683.t1 | MTR_8g042870 | 69.057 | 488 | 146 | 2 | 1 | 487 | 1 | 484 | 0.0 | 700 |
| MS.gene038683.t1 | MTR_3g086440 | 73.846 | 455 | 118 | 1 | 1 | 455 | 1 | 454 | 0.0 | 684 |
| MS.gene038683.t1 | MTR_3g010850 | 70.492 | 488 | 136 | 5 | 1 | 487 | 1 | 481 | 0.0 | 675 |
| MS.gene038683.t1 | MTR_8g042780 | 70.093 | 428 | 124 | 1 | 10 | 437 | 7 | 430 | 0.0 | 649 |
| MS.gene038683.t1 | MTR_3g010850 | 69.161 | 441 | 131 | 3 | 47 | 487 | 34 | 469 | 0.0 | 598 |
| MS.gene038683.t1 | MTR_8g042820 | 69.718 | 284 | 82 | 1 | 153 | 436 | 34 | 313 | 3.24e-146 | 421 |
| MS.gene038683.t1 | MTR_1157s0010 | 70.000 | 160 | 48 | 0 | 328 | 487 | 1 | 160 | 3.30e-75 | 234 |
| MS.gene038683.t1 | MTR_1194s0010 | 69.930 | 143 | 43 | 0 | 10 | 152 | 7 | 149 | 2.22e-70 | 221 |
| MS.gene038683.t1 | MTR_8g075280 | 47.872 | 94 | 32 | 3 | 42 | 134 | 107 | 184 | 3.61e-14 | 72.0 |
| MS.gene038683.t1 | MTR_8g075280 | 47.872 | 94 | 32 | 3 | 42 | 134 | 107 | 184 | 1.18e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038683.t1 | AT5G13750 | 56.184 | 477 | 202 | 3 | 7 | 480 | 6 | 478 | 0.0 | 567 |
| MS.gene038683.t1 | AT3G43790 | 57.143 | 483 | 194 | 4 | 1 | 477 | 1 | 476 | 0.0 | 562 |
| MS.gene038683.t1 | AT3G43790 | 57.143 | 483 | 194 | 4 | 1 | 477 | 1 | 476 | 0.0 | 562 |
| MS.gene038683.t1 | AT3G43790 | 56.442 | 489 | 194 | 5 | 1 | 477 | 1 | 482 | 0.0 | 556 |
| MS.gene038683.t1 | AT3G43790 | 56.442 | 489 | 194 | 5 | 1 | 477 | 1 | 482 | 0.0 | 556 |
| MS.gene038683.t1 | AT5G13740 | 56.341 | 481 | 201 | 4 | 8 | 480 | 7 | 486 | 0.0 | 545 |
| MS.gene038683.t1 | AT5G13740 | 56.552 | 435 | 180 | 4 | 8 | 434 | 7 | 440 | 1.59e-175 | 500 |
| MS.gene038683.t1 | AT3G43790 | 57.282 | 412 | 163 | 4 | 1 | 406 | 1 | 405 | 7.65e-165 | 472 |
| MS.gene038683.t1 | AT5G13750 | 54.300 | 407 | 185 | 1 | 7 | 413 | 6 | 411 | 5.22e-164 | 470 |
| MS.gene038683.t1 | AT5G13750 | 54.300 | 407 | 185 | 1 | 7 | 413 | 6 | 411 | 5.22e-164 | 470 |
| MS.gene038683.t1 | AT5G13750 | 56.061 | 396 | 167 | 3 | 88 | 480 | 1 | 392 | 1.18e-161 | 463 |
| MS.gene038683.t1 | AT5G13940 | 44.595 | 74 | 25 | 1 | 275 | 348 | 11 | 68 | 9.24e-13 | 71.2 |
| MS.gene038683.t1 | AT5G13940 | 44.595 | 74 | 25 | 1 | 275 | 348 | 162 | 219 | 1.13e-12 | 70.9 |
Find 106 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCATAGCAATGCTTTC+TGG | 0.080739 | 8.4:-38447924 | MS.gene038683:CDS |
| ACCAGCTTTGGGAGGTTATT+TGG | 0.181938 | 8.4:-38449841 | MS.gene038683:CDS |
| CTTGATAGGTCTTCTCATTA+TGG | 0.213255 | 8.4:-38448337 | MS.gene038683:intron |
| GAATCCTTTGGAAATAGATT+TGG | 0.256895 | 8.4:+38449554 | None:intergenic |
| TGGGGCATAGGTTTAATAAT+TGG | 0.286368 | 8.4:-38449864 | MS.gene038683:CDS |
| TTTAATAATTGGACCAGCTT+TGG | 0.287965 | 8.4:-38449853 | MS.gene038683:CDS |
| CACAACAATAGATGACATTA+AGG | 0.296857 | 8.4:+38448720 | None:intergenic |
| TTGATAGGTCTTCTCATTAT+GGG | 0.308978 | 8.4:-38448336 | MS.gene038683:intron |
| AAAATGGAAGATGGAAATAT+TGG | 0.310584 | 8.4:-38451624 | MS.gene038683:CDS |
| CTTTCCTTACCAATATTTCA+TGG | 0.317884 | 8.4:-38451217 | MS.gene038683:intron |
| GAAATGGAAGGCAAGAAATA+TGG | 0.321659 | 8.4:+38449400 | None:intergenic |
| AAGAAATAAGCCAGTGATTA+TGG | 0.324621 | 8.4:+38447498 | None:intergenic |
| TTCGAAATCTCTTGAACATA+TGG | 0.324637 | 8.4:-38451515 | MS.gene038683:CDS |
| CGGTAGCAATTGCCTGCATC+TGG | 0.324855 | 8.4:-38449357 | MS.gene038683:CDS |
| CAAGTCCTCCAGCAATATTC+AGG | 0.325855 | 8.4:+38446347 | None:intergenic |
| TTAAACTTACCATGAAATAT+TGG | 0.332048 | 8.4:+38451208 | None:intergenic |
| AATCCTTTGGAAATAGATTT+GGG | 0.333774 | 8.4:+38449555 | None:intergenic |
| CTGAATATTGCTGGAGGACT+TGG | 0.333786 | 8.4:-38446346 | MS.gene038683:CDS |
| TTCAAACCACCTAACCTTCT+AGG | 0.336667 | 8.4:+38448305 | None:intergenic |
| GTAAGATTTGCTCGCATCTC+CGG | 0.354320 | 8.4:-38448070 | MS.gene038683:CDS |
| ATTTCAGTTGAGTGCAGCTT+GGG | 0.362624 | 8.4:-38449883 | MS.gene038683:intron |
| CGAGAAGAAAAGCAAGCTCT+TGG | 0.364652 | 8.4:-38450199 | MS.gene038683:CDS |
| GAGATGCGAGCAAATCTTAC+AGG | 0.370847 | 8.4:+38448073 | None:intergenic |
| TTAATAATTGGACCAGCTTT+GGG | 0.370918 | 8.4:-38449852 | MS.gene038683:CDS |
| GGTGATGTTCTTGCAATATC+AGG | 0.378966 | 8.4:-38448263 | MS.gene038683:intron |
| ATGAAAACCTCTTCCTAAAC+TGG | 0.393957 | 8.4:-38448744 | MS.gene038683:CDS |
| CGCAAAAGCTGATATTGAAA+TGG | 0.395797 | 8.4:+38449384 | None:intergenic |
| GCTTTAGAAACTGGAAGAAA+TGG | 0.399632 | 8.4:-38448799 | MS.gene038683:CDS |
| TTGAGTGCAGCTTGGGGCAT+AGG | 0.405086 | 8.4:-38449876 | MS.gene038683:CDS |
| GATGCTGAGGCTTTAGAAAC+TGG | 0.406344 | 8.4:-38448808 | MS.gene038683:CDS |
| GTGTTGATTGGTACCTTCAT+TGG | 0.407445 | 8.4:+38450352 | None:intergenic |
| ATGACATTAAGGGCCAGTTT+AGG | 0.411844 | 8.4:+38448731 | None:intergenic |
| TAAGATTTGCTCGCATCTCC+GGG | 0.414274 | 8.4:-38448069 | MS.gene038683:CDS |
| TTCAAAACAATTGGTCCAGC+TGG | 0.422073 | 8.4:-38447306 | MS.gene038683:CDS |
| ATAATCCCTAAAATTGCAAC+AGG | 0.426557 | 8.4:+38450794 | None:intergenic |
| GGATGTTTAAATGGTTTGCT+TGG | 0.432632 | 8.4:-38450376 | MS.gene038683:CDS |
| TATGGGCGGTTAGTCCTAGA+AGG | 0.433043 | 8.4:-38448319 | MS.gene038683:CDS |
| TTTGGGAGGTTATTTGGCTC+AGG | 0.435359 | 8.4:-38449835 | MS.gene038683:intron |
| CGTCAAAGAGGGGCAGCTAA+TGG | 0.438013 | 8.4:-38447354 | MS.gene038683:CDS |
| ATCTTTGACATCAATATTGT+GGG | 0.447497 | 8.4:-38450846 | MS.gene038683:CDS |
| TCCAGAAAGCATTGCTATGA+AGG | 0.448179 | 8.4:+38447923 | None:intergenic |
| AGATTTCAATATTGCAGAAA+GGG | 0.453598 | 8.4:-38451020 | MS.gene038683:CDS |
| TAAGGAAAGAGAGATGATAT+AGG | 0.459962 | 8.4:+38451231 | None:intergenic |
| ATGTCAATATTCAAAACAAT+TGG | 0.466702 | 8.4:-38447315 | MS.gene038683:CDS |
| GCCAAATAACCTCCCAAAGC+TGG | 0.467939 | 8.4:+38449840 | None:intergenic |
| AATTGCCTGCATCTGGCTTC+CGG | 0.470962 | 8.4:-38449350 | MS.gene038683:intron |
| GTAAATTTGCAAAAGAGGTA+TGG | 0.473543 | 8.4:+38447947 | None:intergenic |
| CATAACTGCAGGAACTCATA+TGG | 0.474043 | 8.4:-38446380 | MS.gene038683:intron |
| GATCTTTGACATCAATATTG+TGG | 0.476557 | 8.4:-38450847 | MS.gene038683:CDS |
| CACACTGCACCACCTCCAGC+TGG | 0.476747 | 8.4:+38447291 | None:intergenic |
| TGGTTTGCTTGGACCAATGA+AGG | 0.487662 | 8.4:-38450365 | MS.gene038683:intron |
| AAGGGGTAAATTTGCAAAAG+AGG | 0.490290 | 8.4:+38447942 | None:intergenic |
| GATTTCAGTTGAGTGCAGCT+TGG | 0.495255 | 8.4:-38449884 | MS.gene038683:intron |
| GCGGTTAGTCCTAGAAGGTT+AGG | 0.495354 | 8.4:-38448314 | MS.gene038683:CDS |
| AACAGGAACAACGTCAAAGA+GGG | 0.500301 | 8.4:-38447365 | MS.gene038683:intron |
| ACTGGAAGAAATGGAAGAGC+AGG | 0.502249 | 8.4:-38448790 | MS.gene038683:CDS |
| CAATATTATGAGAATTGCCC+TGG | 0.503879 | 8.4:-38451582 | MS.gene038683:CDS |
| GAGATTTCAATATTGCAGAA+AGG | 0.506744 | 8.4:-38451021 | MS.gene038683:CDS |
| AAGTGCTTATGCTGGTTATG+TGG | 0.512014 | 8.4:-38450987 | MS.gene038683:CDS |
| TAAAGCCTCAGCATCATCAA+TGG | 0.512256 | 8.4:+38448816 | None:intergenic |
| GCTAATGGCATTGCTATGAC+TGG | 0.512615 | 8.4:-38447339 | MS.gene038683:CDS |
| CAATGGACTCATTGCTAAGA+GGG | 0.519508 | 8.4:+38448833 | None:intergenic |
| ACAACAATAGATGACATTAA+GGG | 0.521167 | 8.4:+38448721 | None:intergenic |
| TCAATGGACTCATTGCTAAG+AGG | 0.531267 | 8.4:+38448832 | None:intergenic |
| TTATAATATTTCTTATCAAG+AGG | 0.540815 | 8.4:-38448680 | MS.gene038683:intron |
| ATGATGGGTACAGGGAAAGC+TGG | 0.542613 | 8.4:+38448113 | None:intergenic |
| TTAAGGGCCAGTTTAGGAAG+AGG | 0.546629 | 8.4:+38448737 | None:intergenic |
| ACATACCGGAAGCCAGATGC+AGG | 0.551614 | 8.4:+38449345 | None:intergenic |
| CTTACCATGAAATATTGGTA+AGG | 0.558322 | 8.4:+38451213 | None:intergenic |
| ATGAATGCATCTTTCCTCCC+AGG | 0.559191 | 8.4:-38446882 | MS.gene038683:intron |
| GTAGGATCTGCATTCATGCT+TGG | 0.560726 | 8.4:-38450872 | MS.gene038683:intron |
| AACTTCACAACTGAAAATGT+TGG | 0.560964 | 8.4:-38448284 | MS.gene038683:CDS |
| TTGTTCATTCCAGATTAGCT+TGG | 0.564282 | 8.4:-38446917 | MS.gene038683:intron |
| TTTGTCCTGAATATTGCTGG+AGG | 0.566596 | 8.4:-38446352 | MS.gene038683:CDS |
| GAGAAGCAATATTAATCACT+AGG | 0.567739 | 8.4:+38447889 | None:intergenic |
| ATACCCAAATCTATTTCCAA+AGG | 0.569665 | 8.4:-38449558 | MS.gene038683:CDS |
| CAATATTGCAGAAAGGGAGG+AGG | 0.571967 | 8.4:-38451014 | MS.gene038683:CDS |
| ACAATTGGTCCAGCTGGAGG+TGG | 0.572042 | 8.4:-38447300 | MS.gene038683:CDS |
| CCAGAAAGCATTGCTATGAA+GGG | 0.575436 | 8.4:+38447924 | None:intergenic |
| GGAGTCATAGCAGATCGTTA+TGG | 0.582393 | 8.4:-38450824 | MS.gene038683:CDS |
| TTTCAGGCGACCATAATCAC+TGG | 0.582428 | 8.4:-38447508 | MS.gene038683:intron |
| AAAGCTGATATTGAAATGGA+AGG | 0.590059 | 8.4:+38449388 | None:intergenic |
| AAATCTCTTGAACATATGGA+TGG | 0.593890 | 8.4:-38451511 | MS.gene038683:CDS |
| TGTTAGTGTAACTGCTGAGA+GGG | 0.600423 | 8.4:+38446277 | None:intergenic |
| GCTTTGTCAACTTTACAACC+AGG | 0.600998 | 8.4:+38451564 | None:intergenic |
| GAGGACATAAGTGCTTATGC+TGG | 0.604864 | 8.4:-38450995 | MS.gene038683:CDS |
| AAACAGGAACAACGTCAAAG+AGG | 0.605114 | 8.4:-38447366 | MS.gene038683:intron |
| CTTTGTCAACTTTACAACCA+GGG | 0.611858 | 8.4:+38451565 | None:intergenic |
| GTTAGTCCTAGAAGGTTAGG+TGG | 0.612008 | 8.4:-38448311 | MS.gene038683:CDS |
| CAGAAAGCATTGCTATGAAG+GGG | 0.615996 | 8.4:+38447925 | None:intergenic |
| TTTCAATATTGCAGAAAGGG+AGG | 0.617620 | 8.4:-38451017 | MS.gene038683:CDS |
| TCTCTTGAACATATGGATGG+TGG | 0.621234 | 8.4:-38451508 | MS.gene038683:CDS |
| AAAACAATTGGTCCAGCTGG+AGG | 0.629594 | 8.4:-38447303 | MS.gene038683:CDS |
| AGTGCTTATGCTGGTTATGT+GGG | 0.629937 | 8.4:-38450986 | MS.gene038683:intron |
| TCTTATGCAAAATAGAGCAG+TGG | 0.631769 | 8.4:-38447479 | MS.gene038683:intron |
| ATAGGTCTTCTCATTATGGG+CGG | 0.639660 | 8.4:-38448333 | MS.gene038683:intron |
| TTTCAGTTGAGTGCAGCTTG+GGG | 0.641011 | 8.4:-38449882 | MS.gene038683:intron |
| ATAATTGGACCAGCTTTGGG+AGG | 0.649173 | 8.4:-38449849 | MS.gene038683:CDS |
| ACAGGAACAACGTCAAAGAG+GGG | 0.658067 | 8.4:-38447364 | MS.gene038683:intron |
| TCTTTGACATCAATATTGTG+GGG | 0.669080 | 8.4:-38450845 | MS.gene038683:CDS |
| TGAGTCCATTGATGATGCTG+AGG | 0.672523 | 8.4:-38448821 | MS.gene038683:CDS |
| TGGACTCATTGCTAAGAGGG+TGG | 0.674388 | 8.4:+38448836 | None:intergenic |
| ATGTTAGTGTAACTGCTGAG+AGG | 0.711397 | 8.4:+38446276 | None:intergenic |
| TTTGGATGGCTGTTACAACG+CGG | 0.713618 | 8.4:-38450408 | MS.gene038683:CDS |
| AAGATTTGCTCGCATCTCCG+GGG | 0.729111 | 8.4:-38448068 | MS.gene038683:intron |
| AGTTGAGCATCATACCTGGG+AGG | 0.734301 | 8.4:+38446868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATATTTTAAGAAAATTT+TGG | - | chr8.4:38450488-38450507 | MS.gene038683:intron | 10.0% |
| !! | AAATATAAAAGAAGTTATCT+AGG | + | chr8.4:38447871-38447890 | None:intergenic | 15.0% |
| !! | ATAAACTAACTTTATTAAGT+AGG | + | chr8.4:38449253-38449272 | None:intergenic | 15.0% |
| !! | TATTTCAATAAAAATGTTAG+TGG | - | chr8.4:38451358-38451377 | MS.gene038683:intron | 15.0% |
| !! | TTATAATATTTCTTATCAAG+AGG | - | chr8.4:38449220-38449239 | MS.gene038683:intron | 15.0% |
| !!! | TACTTAATAAAGTTAGTTTA+TGG | - | chr8.4:38449252-38449271 | MS.gene038683:intron | 15.0% |
| !! | AAAATACATACATCTATTCA+AGG | + | chr8.4:38447164-38447183 | None:intergenic | 20.0% |
| !! | AGTCAATTTATATATACTCA+AGG | + | chr8.4:38447909-38447928 | None:intergenic | 20.0% |
| !! | ATGTCAATATTCAAAACAAT+TGG | - | chr8.4:38450585-38450604 | MS.gene038683:intron | 20.0% |
| !! | CACAAAATAAAGTATATCTA+GGG | + | chr8.4:38449687-38449706 | None:intergenic | 20.0% |
| !! | CTATGTTTGAATATATAAGA+AGG | + | chr8.4:38448236-38448255 | None:intergenic | 20.0% |
| !! | GAAAATTTCAGATAAATCAA+TGG | + | chr8.4:38450641-38450660 | None:intergenic | 20.0% |
| !! | GAACTGATATTTCATATAAT+AGG | - | chr8.4:38449510-38449529 | MS.gene038683:intron | 20.0% |
| !! | TAAAATATGATCTCAACTAT+TGG | + | chr8.4:38450479-38450498 | None:intergenic | 20.0% |
| !! | TTAAACTTACCATGAAATAT+TGG | + | chr8.4:38446695-38446714 | None:intergenic | 20.0% |
| !!! | CAAATGTTTTTTCTAATGAT+GGG | + | chr8.4:38449805-38449824 | None:intergenic | 20.0% |
| !!! | CATAAATTAGTTTATGAGTT+TGG | + | chr8.4:38451240-38451259 | None:intergenic | 20.0% |
| !!! | TAAGAAAATTTTGGCATAAA+TGG | - | chr8.4:38450497-38450516 | MS.gene038683:intron | 20.0% |
| !!! | TCTGAAATTTTCTTATCAAT+AGG | - | chr8.4:38450649-38450668 | MS.gene038683:intron | 20.0% |
| !!! | TTTTTTCTTGGATGTTTAAA+TGG | - | chr8.4:38447515-38447534 | MS.gene038683:intron | 20.0% |
| ! | AAAACTATATTCGCTCTATT+TGG | + | chr8.4:38447396-38447415 | None:intergenic | 25.0% |
| ! | AAATAGATATGCAATCCTAA+AGG | + | chr8.4:38451326-38451345 | None:intergenic | 25.0% |
| ! | AACACAATAAAAATGAGTGT+TGG | - | chr8.4:38451284-38451303 | MS.gene038683:intron | 25.0% |
| ! | AACTATATATGTCATGATCA+AGG | - | chr8.4:38448185-38448204 | MS.gene038683:intron | 25.0% |
| ! | ACAACAATAGATGACATTAA+GGG | + | chr8.4:38449182-38449201 | None:intergenic | 25.0% |
| ! | ACCATTTAATCACAATATAG+CGG | - | chr8.4:38448854-38448873 | MS.gene038683:intron | 25.0% |
| ! | AGATTGTAGACATATGAAAA+TGG | - | chr8.4:38448142-38448161 | MS.gene038683:intron | 25.0% |
| ! | AGATTTCAATATTGCAGAAA+GGG | - | chr8.4:38446880-38446899 | MS.gene038683:intron | 25.0% |
| ! | ATACTGTTCACATTAAATGT+TGG | + | chr8.4:38446844-38446863 | None:intergenic | 25.0% |
| ! | ATCCAATCAAATATACATAC+CGG | + | chr8.4:38448572-38448591 | None:intergenic | 25.0% |
| ! | ATCTTTGACATCAATATTGT+GGG | - | chr8.4:38447054-38447073 | MS.gene038683:intron | 25.0% |
| ! | ATGAAGATAAAACACATCAA+AGG | + | chr8.4:38446967-38446986 | None:intergenic | 25.0% |
| ! | CAAAATCAGTAATAAACTTG+AGG | + | chr8.4:38448629-38448648 | None:intergenic | 25.0% |
| ! | CCATCATTAGAAAAAACATT+TGG | - | chr8.4:38449803-38449822 | MS.gene038683:intron | 25.0% |
| ! | CTAACTTTATTAAGTAGGAA+TGG | + | chr8.4:38449248-38449267 | None:intergenic | 25.0% |
| ! | GATCATGACATATATAGTTA+AGG | + | chr8.4:38448184-38448203 | None:intergenic | 25.0% |
| ! | GCACAAAATAAAGTATATCT+AGG | + | chr8.4:38449688-38449707 | None:intergenic | 25.0% |
| ! | GGTAAAATAAAGTGAATACT+TGG | - | chr8.4:38450731-38450750 | MS.gene038683:intron | 25.0% |
| ! | TAAAAATGTTAGTGGTTTAG+TGG | - | chr8.4:38451366-38451385 | MS.gene038683:intron | 25.0% |
| ! | TAATATTTCAGCATTCATAG+TGG | - | chr8.4:38449855-38449874 | MS.gene038683:CDS | 25.0% |
| ! | TATCACTGTAAAAATGTTGT+AGG | - | chr8.4:38447010-38447029 | MS.gene038683:intron | 25.0% |
| ! | TGCATCAACAAAAATGAATA+TGG | - | chr8.4:38451212-38451231 | MS.gene038683:intron | 25.0% |
| ! | TGGAATGAAATAGTTTAGAA+TGG | + | chr8.4:38450459-38450478 | None:intergenic | 25.0% |
| ! | TTTCATATGTCTACAATCTA+AGG | + | chr8.4:38448141-38448160 | None:intergenic | 25.0% |
| !! | AACATTTTTACAGTGATAGT+AGG | + | chr8.4:38447008-38447027 | None:intergenic | 25.0% |
| !! | AATCCTTTGGAAATAGATTT+GGG | + | chr8.4:38448348-38448367 | None:intergenic | 25.0% |
| !! | ACTATTTTGTTACCTTATGT+AGG | - | chr8.4:38449924-38449943 | MS.gene038683:intron | 25.0% |
| !! | ATCATTTTCAACACACTATT+TGG | - | chr8.4:38447455-38447474 | MS.gene038683:intron | 25.0% |
| !! | ATGATTTCTATTTGAAGTGT+CGG | - | chr8.4:38449409-38449428 | MS.gene038683:intron | 25.0% |
| !! | ATTTCCAAAGGATTCTTTTT+GGG | - | chr8.4:38448354-38448373 | MS.gene038683:intron | 25.0% |
| !! | TATTTCCAAAGGATTCTTTT+TGG | - | chr8.4:38448353-38448372 | MS.gene038683:intron | 25.0% |
| !! | TTCTTCTTTTCAGTCAAAAA+TGG | + | chr8.4:38451599-38451618 | None:intergenic | 25.0% |
| !!! | AATTTTTTCATACGCTATCA+TGG | + | chr8.4:38447279-38447298 | None:intergenic | 25.0% |
| !!! | AGTTACTTTGTCAAACTTTT+AGG | - | chr8.4:38446540-38446559 | MS.gene038683:intron | 25.0% |
| !!! | CCAAATGTTTTTTCTAATGA+TGG | + | chr8.4:38449806-38449825 | None:intergenic | 25.0% |
| !!! | GTATTCACTTTATTTTACCA+AGG | + | chr8.4:38450730-38450749 | None:intergenic | 25.0% |
| !!! | GTTTATTACTGATTTTGATG+TGG | - | chr8.4:38448632-38448651 | MS.gene038683:intron | 25.0% |
| !!! | TATCTAAAGTTGCTACTTTT+TGG | - | chr8.4:38446808-38446827 | MS.gene038683:intron | 25.0% |
| !!! | TTATTTCTTTGAAGTATCTC+TGG | - | chr8.4:38446761-38446780 | MS.gene038683:intron | 25.0% |
| AAAGCTGATATTGAAATGGA+AGG | + | chr8.4:38448515-38448534 | None:intergenic | 30.0% | |
| AAATCTCTTGAACATATGGA+TGG | - | chr8.4:38446389-38446408 | MS.gene038683:intron | 30.0% | |
| AACTTCACAACTGAAAATGT+TGG | - | chr8.4:38449616-38449635 | MS.gene038683:intron | 30.0% | |
| AAGAAATAAGCCAGTGATTA+TGG | + | chr8.4:38450405-38450424 | None:intergenic | 30.0% | |
| ACATCATTCTACTTCTTGAT+AGG | - | chr8.4:38449549-38449568 | MS.gene038683:CDS | 30.0% | |
| AGCTTAAAAAAAAGGCCTTT+AGG | - | chr8.4:38451308-38451327 | MS.gene038683:intron | 30.0% | |
| ATAAAAAGGGAAGTAAAAGC+AGG | + | chr8.4:38448952-38448971 | None:intergenic | 30.0% | |
| ATAATCCCTAAAATTGCAAC+AGG | + | chr8.4:38447109-38447128 | None:intergenic | 30.0% | |
| ATACCCAAATCTATTTCCAA+AGG | - | chr8.4:38448342-38448361 | MS.gene038683:intron | 30.0% | |
| ATGTGGTATCAGTAAAAGTA+GGG | - | chr8.4:38448649-38448668 | MS.gene038683:intron | 30.0% | |
| CAAAACATAAATCTTGTTGC+AGG | - | chr8.4:38448474-38448493 | MS.gene038683:intron | 30.0% | |
| CACAACAATAGATGACATTA+AGG | + | chr8.4:38449183-38449202 | None:intergenic | 30.0% | |
| CATATGATTTCTCTCTGATA+TGG | + | chr8.4:38447599-38447618 | None:intergenic | 30.0% | |
| CTTACCATGAAATATTGGTA+AGG | + | chr8.4:38446690-38446709 | None:intergenic | 30.0% | |
| CTTTCCTTACCAATATTTCA+TGG | - | chr8.4:38446683-38446702 | MS.gene038683:intron | 30.0% | |
| GAAACTGCATCAATAATGAT+TGG | + | chr8.4:38450085-38450104 | None:intergenic | 30.0% | |
| GAGAAGCAATATTAATCACT+AGG | + | chr8.4:38450014-38450033 | None:intergenic | 30.0% | |
| GAGATTTCAATATTGCAGAA+AGG | - | chr8.4:38446879-38446898 | MS.gene038683:intron | 30.0% | |
| GATCTTTGACATCAATATTG+TGG | - | chr8.4:38447053-38447072 | MS.gene038683:intron | 30.0% | |
| GGACTATTTGAGAAATCTTA+TGG | - | chr8.4:38447200-38447219 | MS.gene038683:intron | 30.0% | |
| GTAAATTTGCAAAAGAGGTA+TGG | + | chr8.4:38449956-38449975 | None:intergenic | 30.0% | |
| GTTATAAATTGACCTAGACT+AGG | - | chr8.4:38450313-38450332 | MS.gene038683:intron | 30.0% | |
| TAAAAAGGGAAGTAAAAGCA+GGG | + | chr8.4:38448951-38448970 | None:intergenic | 30.0% | |
| TAAGGAAAGAGAGATGATAT+AGG | + | chr8.4:38446672-38446691 | None:intergenic | 30.0% | |
| TATTGTTAGAATCCTAGTCT+AGG | + | chr8.4:38450328-38450347 | None:intergenic | 30.0% | |
| TCTTTGACATCAATATTGTG+GGG | - | chr8.4:38447055-38447074 | MS.gene038683:intron | 30.0% | |
| TTAATAATTGGACCAGCTTT+GGG | - | chr8.4:38448048-38448067 | MS.gene038683:intron | 30.0% | |
| TTCCGGTATGTATATTTGAT+TGG | - | chr8.4:38448567-38448586 | MS.gene038683:intron | 30.0% | |
| TTCGAAATCTCTTGAACATA+TGG | - | chr8.4:38446385-38446404 | MS.gene038683:intron | 30.0% | |
| TTGATAGGTCTTCTCATTAT+GGG | - | chr8.4:38449564-38449583 | MS.gene038683:CDS | 30.0% | |
| TTTAATAATTGGACCAGCTT+TGG | - | chr8.4:38448047-38448066 | MS.gene038683:intron | 30.0% | |
| ! | ACCGATAATTTTCTAACCAA+CGG | + | chr8.4:38448795-38448814 | None:intergenic | 30.0% |
| ! | AGAAAACCTGTTGCAATTTT+AGG | - | chr8.4:38447100-38447119 | MS.gene038683:intron | 30.0% |
| ! | AGATTTGGGTATTTTACAGT+TGG | + | chr8.4:38448334-38448353 | None:intergenic | 30.0% |
| ! | AGTTTTCCAAGAAATCAAAC+CGG | + | chr8.4:38451421-38451440 | None:intergenic | 30.0% |
| ! | GAAAACCTGTTGCAATTTTA+GGG | - | chr8.4:38447101-38447120 | MS.gene038683:intron | 30.0% |
| ! | GAATCCTTTGGAAATAGATT+TGG | + | chr8.4:38448349-38448368 | None:intergenic | 30.0% |
| ! | GGATCTATTTTCATCACAAA+AGG | + | chr8.4:38448109-38448128 | None:intergenic | 30.0% |
| ! | TATGGAAGTATGAAACATTC+AGG | + | chr8.4:38447581-38447600 | None:intergenic | 30.0% |
| !! | GTGTTGGTAGCTTAAAAAAA+AGG | - | chr8.4:38451300-38451319 | MS.gene038683:intron | 30.0% |
| !! | TGCAATTTTAGGGATTATCT+CGG | - | chr8.4:38447111-38447130 | MS.gene038683:intron | 30.0% |
| !!! | AGTGAGAATTGAGTTGATTT+TGG | + | chr8.4:38448732-38448751 | None:intergenic | 30.0% |
| !!! | ATTTTAGTTTGTCTACTCGT+AGG | - | chr8.4:38447179-38447198 | MS.gene038683:intron | 30.0% |
| !!! | TTTTTCTAATGATGGGTACA+GGG | + | chr8.4:38449798-38449817 | None:intergenic | 30.0% |
| !!! | TTTTTTCTAATGATGGGTAC+AGG | + | chr8.4:38449799-38449818 | None:intergenic | 30.0% |
| !!! | TTTTTTGTCCTGAATATTGC+TGG | - | chr8.4:38451545-38451564 | MS.gene038683:CDS | 30.0% |
| AAGGGGTAAATTTGCAAAAG+AGG | + | chr8.4:38449961-38449980 | None:intergenic | 35.0% | |
| AATGATCAATGGTCAGGTAT+TGG | - | chr8.4:38449752-38449771 | MS.gene038683:intron | 35.0% | |
| AATTAGTTGAGCATCATACC+TGG | + | chr8.4:38451039-38451058 | None:intergenic | 35.0% | |
| AATTCAAATTCCCTCGAGAA+CGG | + | chr8.4:38450183-38450202 | None:intergenic | 35.0% | |
| ACCTCATTGTATTACTTGGA+TGG | - | chr8.4:38450368-38450387 | MS.gene038683:CDS | 35.0% | |
| AGCTCTTCTCAAATGATCAA+TGG | - | chr8.4:38449741-38449760 | MS.gene038683:intron | 35.0% | |
| AGTAAGCCTGTTGTTAGAAA+AGG | + | chr8.4:38447667-38447686 | None:intergenic | 35.0% | |
| AGTTCTTTCAGATTCCACTT+TGG | - | chr8.4:38448691-38448710 | MS.gene038683:CDS | 35.0% | |
| ATGAAAACCTCTTCCTAAAC+TGG | - | chr8.4:38449156-38449175 | MS.gene038683:intron | 35.0% | |
| ATTAGTTGAGCATCATACCT+GGG | + | chr8.4:38451038-38451057 | None:intergenic | 35.0% | |
| CAATATTATGAGAATTGCCC+TGG | - | chr8.4:38446318-38446337 | MS.gene038683:CDS | 35.0% | |
| CGCAAAAGCTGATATTGAAA+TGG | + | chr8.4:38448519-38448538 | None:intergenic | 35.0% | |
| CTTGATAGGTCTTCTCATTA+TGG | - | chr8.4:38449563-38449582 | MS.gene038683:CDS | 35.0% | |
| CTTTGTCAACTTTACAACCA+GGG | + | chr8.4:38446338-38446357 | None:intergenic | 35.0% | |
| GAAATGGAAGGCAAGAAATA+TGG | + | chr8.4:38448503-38448522 | None:intergenic | 35.0% | |
| GATGTGGTATCAGTAAAAGT+AGG | - | chr8.4:38448648-38448667 | MS.gene038683:intron | 35.0% | |
| GCCGCTATATTGTGATTAAA+TGG | + | chr8.4:38448858-38448877 | None:intergenic | 35.0% | |
| GCTTACCTCATTGTATTACT+TGG | - | chr8.4:38450364-38450383 | MS.gene038683:intron | 35.0% | |
| GCTTTCCTTCTATACATCAA+TGG | - | chr8.4:38449446-38449465 | MS.gene038683:intron | 35.0% | |
| GTATGGATAACACCTACATA+AGG | + | chr8.4:38449939-38449958 | None:intergenic | 35.0% | |
| GTTTAGTGGTAAAAGCTCTA+AGG | - | chr8.4:38451380-38451399 | MS.gene038683:intron | 35.0% | |
| TAATTTACAACCGTTCTCGA+GGG | - | chr8.4:38450170-38450189 | MS.gene038683:intron | 35.0% | |
| TACATGTGTCAATGCCTTAT+AGG | + | chr8.4:38447781-38447800 | None:intergenic | 35.0% | |
| TATGTGAACGAAATCAAACG+TGG | - | chr8.4:38451256-38451275 | MS.gene038683:intron | 35.0% | |
| TATTCGCGTGAGCATAAAAA+GGG | + | chr8.4:38448965-38448984 | None:intergenic | 35.0% | |
| TCCATCCAAGTAATACAATG+AGG | + | chr8.4:38450372-38450391 | None:intergenic | 35.0% | |
| TCTTATGCAAAATAGAGCAG+TGG | - | chr8.4:38450421-38450440 | MS.gene038683:CDS | 35.0% | |
| TGAATGCTGAAATATTACCC+CGG | + | chr8.4:38449852-38449871 | None:intergenic | 35.0% | |
| TGACAGTATCATGTCAATGT+CGG | - | chr8.4:38449384-38449403 | MS.gene038683:CDS | 35.0% | |
| TGGGGCATAGGTTTAATAAT+TGG | - | chr8.4:38448036-38448055 | MS.gene038683:intron | 35.0% | |
| TGTGGTATCAGTAAAAGTAG+GGG | - | chr8.4:38448650-38448669 | MS.gene038683:intron | 35.0% | |
| TTAATTTACAACCGTTCTCG+AGG | - | chr8.4:38450169-38450188 | MS.gene038683:intron | 35.0% | |
| TTATTCGCGTGAGCATAAAA+AGG | + | chr8.4:38448966-38448985 | None:intergenic | 35.0% | |
| TTCTCAAATGATCAATGGTC+AGG | - | chr8.4:38449746-38449765 | MS.gene038683:intron | 35.0% | |
| TTGTCCCAAAAAGAATCCTT+TGG | + | chr8.4:38448361-38448380 | None:intergenic | 35.0% | |
| TTTCAATATTGCAGAAAGGG+AGG | - | chr8.4:38446883-38446902 | MS.gene038683:CDS | 35.0% | |
| ! | AAGGTGTTATCATAAGTACC+CGG | - | chr8.4:38451399-38451418 | MS.gene038683:intron | 35.0% |
| ! | AATAGAGCAGTGGTAATGTT+TGG | - | chr8.4:38450431-38450450 | MS.gene038683:CDS | 35.0% |
| ! | AATATCAGCTTTTGCGTTTG+CGG | - | chr8.4:38448523-38448542 | MS.gene038683:intron | 35.0% |
| ! | GCCGTTGGTTAGAAAATTAT+CGG | - | chr8.4:38448791-38448810 | MS.gene038683:CDS | 35.0% |
| ! | GGAAGAGGTTTTCATCTTTT+TGG | + | chr8.4:38449151-38449170 | None:intergenic | 35.0% |
| ! | GTATTACTTGGATGGATTTC+AGG | - | chr8.4:38450376-38450395 | MS.gene038683:CDS | 35.0% |
| ! | GTTTTCCAAGAAATCAAACC+GGG | + | chr8.4:38451420-38451439 | None:intergenic | 35.0% |
| ! | TACAATCTAAGGCTATTCTC+AGG | + | chr8.4:38448130-38448149 | None:intergenic | 35.0% |
| ! | TCACATCCTTTTCTAACAAC+AGG | - | chr8.4:38447658-38447677 | MS.gene038683:intron | 35.0% |
| ! | TCAGGTATTGTTGTGTTGAT+TGG | + | chr8.4:38447563-38447582 | None:intergenic | 35.0% |
| ! | TTGTTCATTCCAGATTAGCT+TGG | - | chr8.4:38450983-38451002 | MS.gene038683:intron | 35.0% |
| ! | TTTTTGTGACCAAGCTAATC+TGG | + | chr8.4:38450995-38451014 | None:intergenic | 35.0% |
| !! | AGTTTGGTCTTGTAACATCA+AGG | + | chr8.4:38450211-38450230 | None:intergenic | 35.0% |
| !! | GATTAGCTTGGTCACAAAAA+CGG | - | chr8.4:38450995-38451014 | MS.gene038683:CDS | 35.0% |
| !! | GCTTTAGAAACTGGAAGAAA+TGG | - | chr8.4:38449101-38449120 | MS.gene038683:intron | 35.0% |
| !! | GGATGTTTAAATGGTTTGCT+TGG | - | chr8.4:38447524-38447543 | MS.gene038683:intron | 35.0% |
| !! | GGCATGTTGATTTGAAAAAC+AGG | - | chr8.4:38450518-38450537 | MS.gene038683:intron | 35.0% |
| !! | GTTTGGTCTTGTAACATCAA+GGG | + | chr8.4:38450210-38450229 | None:intergenic | 35.0% |
| !!! | AAGTTGCTACTTTTTGGCTA+AGG | - | chr8.4:38446814-38446833 | MS.gene038683:intron | 35.0% |
| !!! | TGTAGCGACATTTTTTGTGT+AGG | - | chr8.4:38448912-38448931 | MS.gene038683:intron | 35.0% |
| AAACAGGAACAACGTCAAAG+AGG | - | chr8.4:38450534-38450553 | MS.gene038683:intron | 40.0% | |
| AACAGGAACAACGTCAAAGA+GGG | - | chr8.4:38450535-38450554 | MS.gene038683:intron | 40.0% | |
| ACGCTATCATGGACAACTTA+TGG | + | chr8.4:38447268-38447287 | None:intergenic | 40.0% | |
| ATAGGTCTTCTCATTATGGG+CGG | - | chr8.4:38449567-38449586 | MS.gene038683:CDS | 40.0% | |
| ATGACATTAAGGGCCAGTTT+AGG | + | chr8.4:38449172-38449191 | None:intergenic | 40.0% | |
| ATTTCAGTTGAGTGCAGCTT+GGG | - | chr8.4:38448017-38448036 | MS.gene038683:intron | 40.0% | |
| CAGAGCCATTGATGTATAGA+AGG | + | chr8.4:38449454-38449473 | None:intergenic | 40.0% | |
| CATAACTGCAGGAACTCATA+TGG | - | chr8.4:38451520-38451539 | MS.gene038683:CDS | 40.0% | |
| CCATCCAAAAACTTGTGCTA+AGG | + | chr8.4:38447481-38447500 | None:intergenic | 40.0% | |
| CTTTAAACGCATATAGCCGT+TGG | - | chr8.4:38448776-38448795 | MS.gene038683:CDS | 40.0% | |
| GACAGTATCATGTCAATGTC+GGG | - | chr8.4:38449385-38449404 | MS.gene038683:CDS | 40.0% | |
| GCTTTGTCAACTTTACAACC+AGG | + | chr8.4:38446339-38446358 | None:intergenic | 40.0% | |
| GGTGATGTTCTTGCAATATC+AGG | - | chr8.4:38449637-38449656 | MS.gene038683:intron | 40.0% | |
| TAAAGCCTCAGCATCATCAA+TGG | + | chr8.4:38449087-38449106 | None:intergenic | 40.0% | |
| TATGCACAACATAGAGCTTC+AGG | + | chr8.4:38451504-38451523 | None:intergenic | 40.0% | |
| TCTATGTTGTGCATAACTGC+AGG | - | chr8.4:38451509-38451528 | MS.gene038683:CDS | 40.0% | |
| TCTCTTGAACATATGGATGG+TGG | - | chr8.4:38446392-38446411 | MS.gene038683:intron | 40.0% | |
| TGTCAATGCCTTATAGGTGT+CGG | + | chr8.4:38447775-38447794 | None:intergenic | 40.0% | |
| TGTCATGTTCGTGTATGCAT+CGG | + | chr8.4:38449319-38449338 | None:intergenic | 40.0% | |
| TTCAAAACAATTGGTCCAGC+TGG | - | chr8.4:38450594-38450613 | MS.gene038683:intron | 40.0% | |
| TTCAAACCACCTAACCTTCT+AGG | + | chr8.4:38449598-38449617 | None:intergenic | 40.0% | |
| TTTAGACCCGCCAAAAAAGA+CGG | - | chr8.4:38451459-38451478 | MS.gene038683:intron | 40.0% | |
| TTTGTCCTGAATATTGCTGG+AGG | - | chr8.4:38451548-38451567 | MS.gene038683:CDS | 40.0% | |
| ! | AAGTACCCGGTTTGATTTCT+TGG | - | chr8.4:38451412-38451431 | MS.gene038683:intron | 40.0% |
| ! | AAGTGCTTATGCTGGTTATG+TGG | - | chr8.4:38446913-38446932 | MS.gene038683:intron | 40.0% |
| ! | AGTGCTTATGCTGGTTATGT+GGG | - | chr8.4:38446914-38446933 | MS.gene038683:intron | 40.0% |
| ! | CAATGGACTCATTGCTAAGA+GGG | + | chr8.4:38449070-38449089 | None:intergenic | 40.0% |
| ! | TCAATGGACTCATTGCTAAG+AGG | + | chr8.4:38449071-38449090 | None:intergenic | 40.0% |
| ! | TGAAGTATCTCTGGCACAAT+AGG | - | chr8.4:38446770-38446789 | MS.gene038683:intron | 40.0% |
| ! | TGTATGCATCGGTGCTTTAT+AGG | + | chr8.4:38449308-38449327 | None:intergenic | 40.0% |
| !! | CAGAAAGCATTGCTATGAAG+GGG | + | chr8.4:38449978-38449997 | None:intergenic | 40.0% |
| !! | CCAGAAAGCATTGCTATGAA+GGG | + | chr8.4:38449979-38449998 | None:intergenic | 40.0% |
| !! | CCTTAGCACAAGTTTTTGGA+TGG | - | chr8.4:38447478-38447497 | MS.gene038683:intron | 40.0% |
| !! | GTGTTGATTGGTACCTTCAT+TGG | + | chr8.4:38447551-38447570 | None:intergenic | 40.0% |
| !! | TCCAGAAAGCATTGCTATGA+AGG | + | chr8.4:38449980-38449999 | None:intergenic | 40.0% |
| !! | TGCTTGTTTCTGAACCAAAG+TGG | + | chr8.4:38448708-38448727 | None:intergenic | 40.0% |
| !!! | AACCCTAATCCCGTCTTTTT+TGG | + | chr8.4:38451472-38451491 | None:intergenic | 40.0% |
| !!! | GTTACAACGCGGTTTTTTCT+TGG | - | chr8.4:38447503-38447522 | MS.gene038683:CDS | 40.0% |
| !!! | TTGGCCTTAGCACAAGTTTT+TGG | - | chr8.4:38447474-38447493 | MS.gene038683:intron | 40.0% |
| AAAACAATTGGTCCAGCTGG+AGG | - | chr8.4:38450597-38450616 | MS.gene038683:intron | 45.0% | |
| AATGTTTCCTACAGTCGAGC+AGG | + | chr8.4:38449038-38449057 | None:intergenic | 45.0% | |
| ACAGGAACAACGTCAAAGAG+GGG | - | chr8.4:38450536-38450555 | MS.gene038683:intron | 45.0% | |
| ACTGGAAGAAATGGAAGAGC+AGG | - | chr8.4:38449110-38449129 | MS.gene038683:intron | 45.0% | |
| ATGAATGCATCTTTCCTCCC+AGG | - | chr8.4:38451018-38451037 | MS.gene038683:CDS | 45.0% | |
| CAAGTCCTCCAGCAATATTC+AGG | + | chr8.4:38451556-38451575 | None:intergenic | 45.0% | |
| CAATATTGCAGAAAGGGAGG+AGG | - | chr8.4:38446886-38446905 | MS.gene038683:CDS | 45.0% | |
| CAGATTATCTGCGATTCGCT+TGG | + | chr8.4:38448443-38448462 | None:intergenic | 45.0% | |
| CCCTTCATAGCAATGCTTTC+TGG | - | chr8.4:38449976-38449995 | MS.gene038683:intron | 45.0% | |
| CGAGAAGAAAAGCAAGCTCT+TGG | - | chr8.4:38447701-38447720 | MS.gene038683:intron | 45.0% | |
| CGCCAAAAAAGACGGGATTA+GGG | - | chr8.4:38451467-38451486 | MS.gene038683:intron | 45.0% | |
| CTGAATATTGCTGGAGGACT+TGG | - | chr8.4:38451554-38451573 | MS.gene038683:CDS | 45.0% | |
| CTTCAGTCTGATGGTTCATG+AGG | + | chr8.4:38450252-38450271 | None:intergenic | 45.0% | |
| GAGATGCGAGCAAATCTTAC+AGG | + | chr8.4:38449830-38449849 | None:intergenic | 45.0% | |
| GAGGACATAAGTGCTTATGC+TGG | - | chr8.4:38446905-38446924 | MS.gene038683:CDS | 45.0% | |
| GATTTCAGTTGAGTGCAGCT+TGG | - | chr8.4:38448016-38448035 | MS.gene038683:intron | 45.0% | |
| GCTAATGGCATTGCTATGAC+TGG | - | chr8.4:38450561-38450580 | MS.gene038683:intron | 45.0% | |
| GGAGTCATAGCAGATCGTTA+TGG | - | chr8.4:38447076-38447095 | MS.gene038683:intron | 45.0% | |
| GTAGGATCTGCATTCATGCT+TGG | - | chr8.4:38447028-38447047 | MS.gene038683:intron | 45.0% | |
| GTTAGTCCTAGAAGGTTAGG+TGG | - | chr8.4:38449589-38449608 | MS.gene038683:intron | 45.0% | |
| GTTGTGACTAACTCATGCCT+TGG | - | chr8.4:38450710-38450729 | MS.gene038683:intron | 45.0% | |
| GTTTCACCATCTCATGTCTC+AGG | - | chr8.4:38447952-38447971 | MS.gene038683:CDS | 45.0% | |
| TCTGATGGTTCATGAGGTGT+CGG | + | chr8.4:38450246-38450265 | None:intergenic | 45.0% | |
| TTAAGGGCCAGTTTAGGAAG+AGG | + | chr8.4:38449166-38449185 | None:intergenic | 45.0% | |
| TTAGACCCGCCAAAAAAGAC+GGG | - | chr8.4:38451460-38451479 | MS.gene038683:intron | 45.0% | |
| TTTCAGGCGACCATAATCAC+TGG | - | chr8.4:38450392-38450411 | MS.gene038683:CDS | 45.0% | |
| TTTCAGTTGAGTGCAGCTTG+GGG | - | chr8.4:38448018-38448037 | MS.gene038683:intron | 45.0% | |
| TTTGGATGGCTGTTACAACG+CGG | - | chr8.4:38447492-38447511 | MS.gene038683:CDS | 45.0% | |
| ! | AAGACGGGATTAGGGTTGAT+TGG | - | chr8.4:38451475-38451494 | MS.gene038683:intron | 45.0% |
| ! | GTAAGATTTGCTCGCATCTC+CGG | - | chr8.4:38449830-38449849 | MS.gene038683:intron | 45.0% |
| ! | TAAGATTTGCTCGCATCTCC+GGG | - | chr8.4:38449831-38449850 | MS.gene038683:intron | 45.0% |
| ! | TGTCGGACATCGACACTTTT+CGG | + | chr8.4:38447758-38447777 | None:intergenic | 45.0% |
| ! | TTTGGGAGGTTATTTGGCTC+AGG | - | chr8.4:38448065-38448084 | MS.gene038683:intron | 45.0% |
| !! | ACCAGCTTTGGGAGGTTATT+TGG | - | chr8.4:38448059-38448078 | MS.gene038683:intron | 45.0% |
| !! | ATAATTGGACCAGCTTTGGG+AGG | - | chr8.4:38448051-38448070 | MS.gene038683:intron | 45.0% |
| !! | GATGCTGAGGCTTTAGAAAC+TGG | - | chr8.4:38449092-38449111 | MS.gene038683:intron | 45.0% |
| !! | TGAGTCCATTGATGATGCTG+AGG | - | chr8.4:38449079-38449098 | MS.gene038683:intron | 45.0% |
| !! | TGGTTTGCTTGGACCAATGA+AGG | - | chr8.4:38447535-38447554 | MS.gene038683:intron | 45.0% |
| !!! | CCTAATCCCGTCTTTTTTGG+CGG | + | chr8.4:38451469-38451488 | None:intergenic | 45.0% |
| !!! | CTAATCCCGTCTTTTTTGGC+GGG | + | chr8.4:38451468-38451487 | None:intergenic | 45.0% |
| AGTTGAGCATCATACCTGGG+AGG | + | chr8.4:38451035-38451054 | None:intergenic | 50.0% | |
| ATGCATACCTGCTCGACTGT+AGG | - | chr8.4:38449028-38449047 | MS.gene038683:intron | 50.0% | |
| CCGCCAAAAAAGACGGGATT+AGG | - | chr8.4:38451466-38451485 | MS.gene038683:intron | 50.0% | |
| GAGAGACCTGAGACATGAGA+TGG | + | chr8.4:38447961-38447980 | None:intergenic | 50.0% | |
| GCCAAATAACCTCCCAAAGC+TGG | + | chr8.4:38448063-38448082 | None:intergenic | 50.0% | |
| GTCGATGTCCGACACCTATA+AGG | - | chr8.4:38447764-38447783 | MS.gene038683:intron | 50.0% | |
| TCGGCTCAGTGGTAAGAGTT+TGG | + | chr8.4:38450227-38450246 | None:intergenic | 50.0% | |
| TGGACTCATTGCTAAGAGGG+TGG | + | chr8.4:38449067-38449086 | None:intergenic | 50.0% | |
| ! | AAGATTTGCTCGCATCTCCG+GGG | - | chr8.4:38449832-38449851 | MS.gene038683:intron | 50.0% |
| ! | AATTGCCTGCATCTGGCTTC+CGG | - | chr8.4:38448550-38448569 | MS.gene038683:intron | 50.0% |
| ! | GCGGTTAGTCCTAGAAGGTT+AGG | - | chr8.4:38449586-38449605 | MS.gene038683:intron | 50.0% |
| ! | TATGGGCGGTTAGTCCTAGA+AGG | - | chr8.4:38449581-38449600 | MS.gene038683:intron | 50.0% |
| !! | ATGATGGGTACAGGGAAAGC+TGG | + | chr8.4:38449790-38449809 | None:intergenic | 50.0% |
| ACAATTGGTCCAGCTGGAGG+TGG | - | chr8.4:38450600-38450619 | MS.gene038683:intron | 55.0% | |
| ACATACCGGAAGCCAGATGC+AGG | + | chr8.4:38448558-38448577 | None:intergenic | 55.0% | |
| CGGTAGCAATTGCCTGCATC+TGG | - | chr8.4:38448543-38448562 | MS.gene038683:intron | 55.0% | |
| CGTCAAAGAGGGGCAGCTAA+TGG | - | chr8.4:38450546-38450565 | MS.gene038683:intron | 55.0% | |
| TTGAGTGCAGCTTGGGGCAT+AGG | - | chr8.4:38448024-38448043 | MS.gene038683:intron | 55.0% | |
| !! | TTCATGAGGTGTCGGCTCAG+TGG | + | chr8.4:38450238-38450257 | None:intergenic | 55.0% |
| CACACTGCACCACCTCCAGC+TGG | + | chr8.4:38450612-38450631 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 38446279 | 38451643 | 38446279 | ID=MS.gene038683 |
| chr8.4 | mRNA | 38446279 | 38451643 | 38446279 | ID=MS.gene038683.t1;Parent=MS.gene038683 |
| chr8.4 | exon | 38451496 | 38451643 | 38451496 | ID=MS.gene038683.t1.exon1;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38451496 | 38451643 | 38451496 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38451218 | 38451258 | 38451218 | ID=MS.gene038683.t1.exon2;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38451218 | 38451258 | 38451218 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38450987 | 38451047 | 38450987 | ID=MS.gene038683.t1.exon3;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38450987 | 38451047 | 38450987 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38450788 | 38450890 | 38450788 | ID=MS.gene038683.t1.exon4;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38450788 | 38450890 | 38450788 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38450366 | 38450468 | 38450366 | ID=MS.gene038683.t1.exon5;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38450366 | 38450468 | 38450366 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38450189 | 38450242 | 38450189 | ID=MS.gene038683.t1.exon6;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38450189 | 38450242 | 38450189 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38449836 | 38449898 | 38449836 | ID=MS.gene038683.t1.exon7;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38449836 | 38449898 | 38449836 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38449542 | 38449591 | 38449542 | ID=MS.gene038683.t1.exon8;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38449542 | 38449591 | 38449542 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38449351 | 38449426 | 38449351 | ID=MS.gene038683.t1.exon9;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38449351 | 38449426 | 38449351 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38448681 | 38448872 | 38448681 | ID=MS.gene038683.t1.exon10;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38448681 | 38448872 | 38448681 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38448264 | 38448351 | 38448264 | ID=MS.gene038683.t1.exon11;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38448264 | 38448351 | 38448264 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38448069 | 38448154 | 38448069 | ID=MS.gene038683.t1.exon12;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38448069 | 38448154 | 38448069 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38447869 | 38447976 | 38447869 | ID=MS.gene038683.t1.exon13;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38447869 | 38447976 | 38447869 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38447480 | 38447524 | 38447480 | ID=MS.gene038683.t1.exon14;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38447480 | 38447524 | 38447480 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38447294 | 38447382 | 38447294 | ID=MS.gene038683.t1.exon15;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38447294 | 38447382 | 38447294 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38446883 | 38446926 | 38446883 | ID=MS.gene038683.t1.exon16;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38446883 | 38446926 | 38446883 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| chr8.4 | exon | 38446279 | 38446391 | 38446279 | ID=MS.gene038683.t1.exon17;Parent=MS.gene038683.t1 |
| chr8.4 | CDS | 38446279 | 38446391 | 38446279 | ID=cds.MS.gene038683.t1;Parent=MS.gene038683.t1 |
| Gene Sequence |
| Protein sequence |
