Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59757.t1 | XP_013445183.1 | 97.1 | 483 | 13 | 1 | 1 | 483 | 6 | 487 | 2.30E-264 | 921 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59757.t1 | Q94BZ1 | 56.9 | 476 | 199 | 3 | 3 | 476 | 7 | 478 | 5.7e-155 | 548.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59757.t1 | A0A072TNX0 | 97.1 | 483 | 13 | 1 | 1 | 483 | 6 | 487 | 1.6e-264 | 921.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050508 | MS.gene59757 | 0.805298 | 1.43E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59757.t1 | MTR_8g042770 | 97.101 | 483 | 13 | 1 | 1 | 483 | 6 | 487 | 0.0 | 956 |
| MS.gene59757.t1 | MTR_8g042780 | 80.913 | 482 | 88 | 2 | 2 | 483 | 3 | 480 | 0.0 | 820 |
| MS.gene59757.t1 | MTR_8g042870 | 79.710 | 483 | 94 | 2 | 1 | 483 | 6 | 484 | 0.0 | 793 |
| MS.gene59757.t1 | MTR_8g042780 | 80.556 | 432 | 80 | 2 | 2 | 433 | 3 | 430 | 0.0 | 733 |
| MS.gene59757.t1 | MTR_3g010820 | 70.564 | 479 | 139 | 2 | 6 | 483 | 10 | 487 | 0.0 | 721 |
| MS.gene59757.t1 | MTR_8g062990 | 69.520 | 479 | 144 | 2 | 6 | 483 | 10 | 487 | 0.0 | 712 |
| MS.gene59757.t1 | MTR_3g086440 | 70.067 | 451 | 133 | 2 | 1 | 451 | 6 | 454 | 0.0 | 659 |
| MS.gene59757.t1 | MTR_3g010850 | 65.116 | 473 | 161 | 1 | 3 | 475 | 6 | 474 | 0.0 | 650 |
| MS.gene59757.t1 | MTR_3g010850 | 64.318 | 440 | 153 | 1 | 36 | 475 | 27 | 462 | 0.0 | 591 |
| MS.gene59757.t1 | MTR_8g042820 | 79.225 | 284 | 55 | 2 | 149 | 432 | 34 | 313 | 8.49e-163 | 463 |
| MS.gene59757.t1 | MTR_1157s0010 | 82.500 | 160 | 28 | 0 | 324 | 483 | 1 | 160 | 1.64e-89 | 270 |
| MS.gene59757.t1 | MTR_1194s0010 | 80.952 | 147 | 28 | 0 | 2 | 148 | 3 | 149 | 1.00e-85 | 260 |
| MS.gene59757.t1 | MTR_8g075280 | 48.958 | 96 | 32 | 3 | 36 | 130 | 105 | 184 | 1.13e-14 | 73.6 |
| MS.gene59757.t1 | MTR_8g075280 | 48.958 | 96 | 32 | 3 | 36 | 130 | 105 | 184 | 4.02e-14 | 73.2 |
| MS.gene59757.t1 | MTR_2g025290 | 62.264 | 53 | 19 | 1 | 228 | 280 | 1 | 52 | 5.21e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59757.t1 | AT5G13750 | 56.933 | 476 | 199 | 3 | 3 | 476 | 7 | 478 | 0.0 | 573 |
| MS.gene59757.t1 | AT3G43790 | 54.008 | 474 | 212 | 3 | 2 | 473 | 7 | 476 | 0.0 | 542 |
| MS.gene59757.t1 | AT3G43790 | 54.008 | 474 | 212 | 3 | 2 | 473 | 7 | 476 | 0.0 | 542 |
| MS.gene59757.t1 | AT3G43790 | 53.333 | 480 | 212 | 4 | 2 | 473 | 7 | 482 | 0.0 | 535 |
| MS.gene59757.t1 | AT3G43790 | 53.333 | 480 | 212 | 4 | 2 | 473 | 7 | 482 | 0.0 | 535 |
| MS.gene59757.t1 | AT5G13740 | 53.430 | 481 | 218 | 2 | 2 | 476 | 6 | 486 | 0.0 | 534 |
| MS.gene59757.t1 | AT5G13740 | 54.005 | 437 | 195 | 2 | 2 | 432 | 6 | 442 | 4.47e-172 | 491 |
| MS.gene59757.t1 | AT5G13750 | 55.949 | 395 | 169 | 2 | 84 | 476 | 1 | 392 | 2.77e-164 | 470 |
| MS.gene59757.t1 | AT5G13750 | 54.279 | 409 | 181 | 3 | 3 | 409 | 7 | 411 | 6.55e-164 | 469 |
| MS.gene59757.t1 | AT5G13750 | 54.279 | 409 | 181 | 3 | 3 | 409 | 7 | 411 | 6.55e-164 | 469 |
| MS.gene59757.t1 | AT3G43790 | 53.102 | 403 | 183 | 3 | 2 | 402 | 7 | 405 | 1.74e-155 | 448 |
Find 102 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGTTAGTCCTCTAAATT+TGG | 0.111977 | 8.3:+55498404 | MS.gene59757:CDS |
| GAACCCTTTGGAAAGATATT+TGG | 0.146054 | 8.3:-55497666 | None:intergenic |
| GAACTTTGACATCTGTATTA+TGG | 0.179763 | 8.3:+55496590 | MS.gene59757:CDS |
| TGTTATCACAAGATTTCTTT+TGG | 0.235759 | 8.3:+55496847 | MS.gene59757:CDS |
| AAAAGAAATTGTACCTTTAC+TGG | 0.246053 | 8.3:-55496893 | None:intergenic |
| ACCAGCATTGGGAGGCTATT+TGG | 0.277904 | 8.3:+55497395 | MS.gene59757:CDS |
| CCACTGCTCGGTTCTGTATA+AGG | 0.292660 | 8.3:-55498979 | None:intergenic |
| CTTAATTTGGTTGAAGGACT+TGG | 0.297066 | 8.3:+55499835 | MS.gene59757:CDS |
| GATGCTGAAGCTATAGAAAA+TGG | 0.297671 | 8.3:+55498160 | MS.gene59757:CDS |
| TTCCATTAGCTGCCCCTCTT+TGG | 0.304002 | 8.3:-55499150 | None:intergenic |
| ACTTACAATATACCAATATA+TGG | 0.310859 | 8.3:+55498584 | MS.gene59757:CDS |
| AACTTTGACATCTGTATTAT+GGG | 0.312954 | 8.3:+55496591 | MS.gene59757:CDS |
| TCTGTTAGTCCTCTAAATTT+GGG | 0.313936 | 8.3:+55498405 | MS.gene59757:CDS |
| ATGAAAACCTCTTGATGAAT+TGG | 0.315223 | 8.3:+55498221 | MS.gene59757:CDS |
| TTGCCCTGCTTCATAATATC+AGG | 0.334714 | 8.3:+55497975 | MS.gene59757:CDS |
| GGTAATGTTCTTGCAATTAC+AGG | 0.337198 | 8.3:+55498456 | MS.gene59757:CDS |
| TCTTTCCAAAGGGTTCCTTT+TGG | 0.343617 | 8.3:+55497673 | MS.gene59757:CDS |
| CAAGTCCTTCAACCAAATTA+AGG | 0.346986 | 8.3:-55499834 | None:intergenic |
| TATTGCCTGCTTGTGGATTC+CGG | 0.349430 | 8.3:+55498016 | MS.gene59757:CDS |
| TTCTTCCTTAATTTGGTTGA+AGG | 0.351724 | 8.3:+55499829 | MS.gene59757:CDS |
| GTAAGTGCAGCTTGGGGAAC+AGG | 0.372551 | 8.3:+55497360 | MS.gene59757:CDS |
| GGAACTTTAAATGGTGCAAT+TGG | 0.374218 | 8.3:+55496869 | MS.gene59757:CDS |
| AAAACACCAATGACTATAAC+AGG | 0.374710 | 8.3:-55496643 | None:intergenic |
| AGCAATGATAGATGACATAA+AGG | 0.379944 | 8.3:-55498245 | None:intergenic |
| ATAAACTCACCATGAAATAA+AGG | 0.383235 | 8.3:-55496107 | None:intergenic |
| CAAGGATTGTCCTGGTTGTA+AGG | 0.386628 | 8.3:+55495146 | MS.gene59757:CDS |
| TGGGGAACAGGTTTAATCAT+TGG | 0.389285 | 8.3:+55497372 | MS.gene59757:CDS |
| TTATCCCAAAAGGAACCCTT+TGG | 0.400052 | 8.3:-55497678 | None:intergenic |
| CACCAAAGAGGGGCAGCTAA+TGG | 0.408771 | 8.3:+55499148 | MS.gene59757:CDS |
| CGAAAACCTGTTATAGTCAT+TGG | 0.412171 | 8.3:+55496637 | MS.gene59757:CDS |
| GTGATTCGAGCAATGTTAAC+AGG | 0.415919 | 8.3:-55498621 | None:intergenic |
| ATATTTGGATATTTCTCTGC+TGG | 0.421967 | 8.3:-55497651 | None:intergenic |
| ATGAAGCAGGGCAAGAAGTA+AGG | 0.425065 | 8.3:-55497966 | None:intergenic |
| GCCAAATAGCCTCCCAATGC+TGG | 0.444343 | 8.3:-55497396 | None:intergenic |
| TTAATCATTGGACCAGCATT+GGG | 0.448070 | 8.3:+55497384 | MS.gene59757:CDS |
| AACAGGAACAACACCAAAGA+GGG | 0.450572 | 8.3:+55499137 | MS.gene59757:intron |
| TATAGAAAATGGAAGCATAA+AGG | 0.454633 | 8.3:+55498171 | MS.gene59757:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8.3:+55498758 | MS.gene59757:CDS |
| TTTAATCATTGGACCAGCAT+TGG | 0.458138 | 8.3:+55497383 | MS.gene59757:CDS |
| AACTCCTGATATTATGAAGC+AGG | 0.459270 | 8.3:-55497979 | None:intergenic |
| AAAGCCATTGGACCTGCTGC+TGG | 0.461289 | 8.3:+55499199 | MS.gene59757:CDS |
| GTTAACATTGCTCGAATCAC+AGG | 0.464230 | 8.3:+55498624 | MS.gene59757:CDS |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8.3:-55498759 | None:intergenic |
| AAGGAATAAACCTGTTGTAA+TGG | 0.468522 | 8.3:-55498960 | None:intergenic |
| AGCTACTATGCTGGCTATGT+AGG | 0.471772 | 8.3:+55496461 | MS.gene59757:CDS |
| ATGATGTTCAAACCATTCCT+TGG | 0.480456 | 8.3:+55499865 | MS.gene59757:CDS |
| CGAGAAGAACACCAAGCTCT+AGG | 0.480505 | 8.3:+55497106 | MS.gene59757:CDS |
| TTTGTTTATGCAGATTAACT+TGG | 0.481451 | 8.3:+55499351 | MS.gene59757:intron |
| GACATCTGTATTATGGGGAA+TGG | 0.486093 | 8.3:+55496597 | MS.gene59757:CDS |
| ATTGGGAGGCTATTTGGCTC+AGG | 0.486506 | 8.3:+55497401 | MS.gene59757:CDS |
| TTTAACTGCAGGCACCCATA+TGG | 0.489334 | 8.3:+55499801 | MS.gene59757:intron |
| AGCTTCAGCATCATCTATGA+TGG | 0.493611 | 8.3:-55498149 | None:intergenic |
| CTGTTAGTCCTCTAAATTTG+GGG | 0.496551 | 8.3:+55498406 | MS.gene59757:CDS |
| GTCAACTTACTTATCCCAAA+AGG | 0.499950 | 8.3:-55497688 | None:intergenic |
| TATATTGGTATATTGTAAGT+TGG | 0.500955 | 8.3:-55498581 | None:intergenic |
| AAATATGAGAGAGCCATTGT+TGG | 0.503789 | 8.3:+55495107 | None:intergenic |
| ACTTAGGTGACCATTACAAC+AGG | 0.504930 | 8.3:+55498950 | MS.gene59757:intron |
| TGGTGCAATTGGACCAGTAA+AGG | 0.511905 | 8.3:+55496880 | MS.gene59757:CDS |
| TATTGCTTCTTCTCCAACAA+TGG | 0.512437 | 8.3:-55495120 | None:intergenic |
| TAGTAGTTATTGCCTGCTTG+TGG | 0.513431 | 8.3:+55498009 | MS.gene59757:CDS |
| ATGGATGCTTCTTTCCTCCC+AGG | 0.513858 | 8.3:+55499386 | MS.gene59757:CDS |
| GCAATGATAGATGACATAAA+GGG | 0.520373 | 8.3:-55498244 | None:intergenic |
| TATCCAAATATCTTTCCAAA+GGG | 0.526914 | 8.3:+55497663 | MS.gene59757:CDS |
| ATGTCTCTCTTCAAAGCCAT+TGG | 0.531099 | 8.3:+55499187 | MS.gene59757:CDS |
| CTGTTGAGAGTCCTAGAGCT+TGG | 0.540220 | 8.3:-55497117 | None:intergenic |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8.3:-55498758 | None:intergenic |
| AAGGGGTAACTTTGCAACAA+TGG | 0.549893 | 8.3:-55498740 | None:intergenic |
| GTAGGATCATCATTCATGCT+TGG | 0.553411 | 8.3:+55496565 | MS.gene59757:intron |
| GTTAGTCCTCTAAATTTGGG+GGG | 0.555025 | 8.3:+55498408 | MS.gene59757:CDS |
| TGTTAGTCCTCTAAATTTGG+GGG | 0.556819 | 8.3:+55498407 | MS.gene59757:CDS |
| ATATCCAAATATCTTTCCAA+AGG | 0.563619 | 8.3:+55497662 | MS.gene59757:CDS |
| CAATACTACAAGGATTGTCC+TGG | 0.565609 | 8.3:+55495138 | MS.gene59757:CDS |
| TAAAGGGCCAATTCATCAAG+AGG | 0.566648 | 8.3:-55498228 | None:intergenic |
| ACACACAATATTCATGAGGA+TGG | 0.568497 | 8.3:-55498813 | None:intergenic |
| ATAGTAGCTAATATCAGCCT+CGG | 0.569820 | 8.3:-55496447 | None:intergenic |
| TTAACATTGCTCGAATCACA+GGG | 0.570393 | 8.3:+55498625 | MS.gene59757:CDS |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8.3:+55499367 | MS.gene59757:CDS |
| CACATTGTACCACCAGCAGC+AGG | 0.570958 | 8.3:-55499211 | None:intergenic |
| TGAAGCAGGGCAAGAAGTAA+GGG | 0.572431 | 8.3:-55497965 | None:intergenic |
| CTCACCATGAAATAAAGGAA+TGG | 0.574296 | 8.3:-55496102 | None:intergenic |
| TCATGATATTGCTTATCAAG+AGG | 0.581145 | 8.3:+55498285 | MS.gene59757:CDS |
| ACCACCAGCAGCAGGTCCAA+TGG | 0.593703 | 8.3:-55499203 | None:intergenic |
| AAACAGGAACAACACCAAAG+AGG | 0.593747 | 8.3:+55499136 | MS.gene59757:intron |
| TGAATACACTTACCACTGCT+CGG | 0.594002 | 8.3:-55498991 | None:intergenic |
| ATCATTGGACCAGCATTGGG+AGG | 0.595293 | 8.3:+55497387 | MS.gene59757:CDS |
| ACTCCTGATATTATGAAGCA+GGG | 0.598947 | 8.3:-55497978 | None:intergenic |
| GCTTGGTCAACCTTACAACC+AGG | 0.599602 | 8.3:-55495156 | None:intergenic |
| GCTGATATTAGCTACTATGC+TGG | 0.603154 | 8.3:+55496452 | MS.gene59757:CDS |
| GGAATGGTTTCTGATCGCTA+TGG | 0.618861 | 8.3:+55496613 | MS.gene59757:CDS |
| ACTTTGACATCTGTATTATG+GGG | 0.630925 | 8.3:+55496592 | MS.gene59757:CDS |
| AACTTCACAACTGATGATGT+CGG | 0.634201 | 8.3:+55498435 | MS.gene59757:CDS |
| GGAGAAGAAGCAATACTACA+AGG | 0.641228 | 8.3:+55495128 | MS.gene59757:CDS |
| GCCATTGGACCTGCTGCTGG+TGG | 0.641632 | 8.3:+55499202 | MS.gene59757:CDS |
| ACATACCGGAATCCACAAGC+AGG | 0.647969 | 8.3:-55498021 | None:intergenic |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8.3:-55498757 | None:intergenic |
| AGTTGAGCATTGTACCTGGG+AGG | 0.670053 | 8.3:-55499400 | None:intergenic |
| TTACACACACAATATTCATG+AGG | 0.676661 | 8.3:-55498817 | None:intergenic |
| CCTTATACAGAACCGAGCAG+TGG | 0.682906 | 8.3:+55498979 | MS.gene59757:CDS |
| GAAACACTTCACAAGCACAA+TGG | 0.697668 | 8.3:+55498115 | MS.gene59757:CDS |
| CAAGCAAAAGAGCTTAACCA+AGG | 0.710227 | 8.3:+55495174 | MS.gene59757:CDS |
| ACAGGAACAACACCAAAGAG+GGG | 0.717818 | 8.3:+55499138 | MS.gene59757:intron |
| TAACATTGCTCGAATCACAG+GGG | 0.777198 | 8.3:+55498626 | MS.gene59757:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATGAAAATGAAAT+TGG | - | chr8.3:55496137-55496156 | None:intergenic | 10.0% |
| !! | ATAATTAAAATTGTGATATA+TGG | + | chr8.3:55497323-55497342 | MS.gene59757:intron | 10.0% |
| !!! | AATATTAAGAATACAATTTT+TGG | + | chr8.3:55496339-55496358 | MS.gene59757:intron | 10.0% |
| !!! | ATTTTTTATTTTGAAGAAAA+TGG | - | chr8.3:55499028-55499047 | None:intergenic | 10.0% |
| !! | TTATTCATATACATACAAAA+AGG | - | chr8.3:55496235-55496254 | None:intergenic | 15.0% |
| !! | TTTGTATGTATATGAATAAT+TGG | + | chr8.3:55496236-55496255 | MS.gene59757:intron | 15.0% |
| !!! | AGAGTTTAAGATATATTAAA+TGG | + | chr8.3:55498885-55498904 | MS.gene59757:intron | 15.0% |
| !!! | CACAATTTTAATTATTATGA+TGG | - | chr8.3:55497318-55497337 | None:intergenic | 15.0% |
| !!! | GGTAAATTTTTTAATCAATA+AGG | + | chr8.3:55498306-55498325 | MS.gene59757:intron | 15.0% |
| !!! | GTTTTATAAAATTGAAAAGT+AGG | - | chr8.3:55497718-55497737 | None:intergenic | 15.0% |
| !!! | TTACAGTTAATTTAGTTTTA+TGG | - | chr8.3:55499702-55499721 | None:intergenic | 15.0% |
| !!! | TTCAATTTTATAAAACTCAA+GGG | + | chr8.3:55497722-55497741 | MS.gene59757:intron | 15.0% |
| !!! | TTTCAATTTTATAAAACTCA+AGG | + | chr8.3:55497721-55497740 | MS.gene59757:intron | 15.0% |
| !! | ACTTACAATATACCAATATA+TGG | + | chr8.3:55498584-55498603 | MS.gene59757:CDS | 20.0% |
| !! | ATTAATCTCTCTAATACTTT+GGG | + | chr8.3:55497612-55497631 | MS.gene59757:intron | 20.0% |
| !! | ATTTCAAAAGACCATTTATT+TGG | - | chr8.3:55497513-55497532 | None:intergenic | 20.0% |
| !! | TATATTGGTATATTGTAAGT+TGG | - | chr8.3:55498584-55498603 | None:intergenic | 20.0% |
| !! | TATTCAATTGAAAAGTTTGA+AGG | + | chr8.3:55497455-55497474 | MS.gene59757:intron | 20.0% |
| !! | TGTAATCAATAAGAGAAAAT+AGG | + | chr8.3:55495722-55495741 | MS.gene59757:intron | 20.0% |
| !!! | AAATGATTTGTTGTGAAAAA+TGG | - | chr8.3:55497938-55497957 | None:intergenic | 20.0% |
| !!! | AACATTTATTTTTCAGGTAA+GGG | + | chr8.3:55496406-55496425 | MS.gene59757:intron | 20.0% |
| !!! | AATTGTGATATATGGTTTTA+TGG | + | chr8.3:55497331-55497350 | MS.gene59757:intron | 20.0% |
| !!! | ATATATGGTTTTATGGTTTT+AGG | + | chr8.3:55497338-55497357 | MS.gene59757:intron | 20.0% |
| !!! | CATTTAAGTTTCCTTTATTT+AGG | + | chr8.3:55495570-55495589 | MS.gene59757:intron | 20.0% |
| !!! | GAATTTTTTTGATATATCTC+AGG | - | chr8.3:55499540-55499559 | None:intergenic | 20.0% |
| !!! | TAAGAATACAATTTTTGGTT+AGG | + | chr8.3:55496344-55496363 | MS.gene59757:intron | 20.0% |
| !!! | TATGACGAAAAGATTTTTAA+TGG | - | chr8.3:55495205-55495224 | None:intergenic | 20.0% |
| !!! | TTAAAAATCTTTTCGTCATA+TGG | + | chr8.3:55495205-55495224 | MS.gene59757:CDS | 20.0% |
| ! | AAAAGAAATTGTACCTTTAC+TGG | - | chr8.3:55496896-55496915 | None:intergenic | 25.0% |
| ! | AAATAATTAGCTATCCAATG+TGG | - | chr8.3:55495802-55495821 | None:intergenic | 25.0% |
| ! | AACTTTGACATCTGTATTAT+GGG | + | chr8.3:55496591-55496610 | MS.gene59757:CDS | 25.0% |
| ! | AAGTCCTAATGAACAAAAAT+TGG | - | chr8.3:55495311-55495330 | None:intergenic | 25.0% |
| ! | AATAATTAGCTATCCAATGT+GGG | - | chr8.3:55495801-55495820 | None:intergenic | 25.0% |
| ! | AGAATACAATCAGTCAAATT+TGG | - | chr8.3:55498921-55498940 | None:intergenic | 25.0% |
| ! | ATAAACTCACCATGAAATAA+AGG | - | chr8.3:55496110-55496129 | None:intergenic | 25.0% |
| ! | ATATCCAAATATCTTTCCAA+AGG | + | chr8.3:55497662-55497681 | MS.gene59757:CDS | 25.0% |
| ! | ATGATGATTGAAAATGTTGT+AGG | + | chr8.3:55496547-55496566 | MS.gene59757:intron | 25.0% |
| ! | CATTAATCTCTCTAATACTT+TGG | + | chr8.3:55497611-55497630 | MS.gene59757:intron | 25.0% |
| ! | CTCTCAATATTAGTCATAAA+TGG | - | chr8.3:55498869-55498888 | None:intergenic | 25.0% |
| ! | CTGTATTGTTAAAACTAAAG+GGG | - | chr8.3:55497291-55497310 | None:intergenic | 25.0% |
| ! | GCTGTATTGTTAAAACTAAA+GGG | - | chr8.3:55497292-55497311 | None:intergenic | 25.0% |
| ! | TAATTGTTTAAACTACATGC+AGG | + | chr8.3:55498093-55498112 | MS.gene59757:intron | 25.0% |
| ! | TATCCAAATATCTTTCCAAA+GGG | + | chr8.3:55497663-55497682 | MS.gene59757:CDS | 25.0% |
| ! | TCAATTGAATACAAAGTTTC+AGG | - | chr8.3:55497446-55497465 | None:intergenic | 25.0% |
| ! | TGCTGTATTGTTAAAACTAA+AGG | - | chr8.3:55497293-55497312 | None:intergenic | 25.0% |
| ! | TGTAAAAAGAGAGAAAATGT+GGG | + | chr8.3:55495601-55495620 | MS.gene59757:intron | 25.0% |
| ! | TTGTAAAAAGAGAGAAAATG+TGG | + | chr8.3:55495600-55495619 | MS.gene59757:intron | 25.0% |
| ! | TTTGTTTATGCAGATTAACT+TGG | + | chr8.3:55499351-55499370 | MS.gene59757:intron | 25.0% |
| !! | AAGCACTTATAAACCATTTT+GGG | + | chr8.3:55499585-55499604 | MS.gene59757:intron | 25.0% |
| !! | AATTATGGCACATATTGATT+TGG | + | chr8.3:55499112-55499131 | MS.gene59757:intron | 25.0% |
| !! | ACAAACTTTTGCCTAAATAA+AGG | - | chr8.3:55495584-55495603 | None:intergenic | 25.0% |
| !! | ACTGATTGTATTCTTTTCTA+TGG | + | chr8.3:55498927-55498946 | MS.gene59757:intron | 25.0% |
| !! | ATTTTCCATGACCAAATAAA+TGG | + | chr8.3:55497499-55497518 | MS.gene59757:intron | 25.0% |
| !! | CTTTCCAATTTTTGTTCATT+AGG | + | chr8.3:55495304-55495323 | MS.gene59757:intron | 25.0% |
| !! | GTTATCACAAGATTTCTTTT+GGG | + | chr8.3:55496848-55496867 | MS.gene59757:CDS | 25.0% |
| !! | TAAGCACTTATAAACCATTT+TGG | + | chr8.3:55499584-55499603 | MS.gene59757:intron | 25.0% |
| !! | TATAGAAAATGGAAGCATAA+AGG | + | chr8.3:55498171-55498190 | MS.gene59757:CDS | 25.0% |
| !! | TGTTATCACAAGATTTCTTT+TGG | + | chr8.3:55496847-55496866 | MS.gene59757:CDS | 25.0% |
| !! | TTTCACAACAAATCATTTTC+AGG | + | chr8.3:55497940-55497959 | MS.gene59757:intron | 25.0% |
| !!! | AAAAGCATCAAATTCATTGA+CGG | - | chr8.3:55496685-55496704 | None:intergenic | 25.0% |
| !!! | AGTAAAGGTACAATTTCTTT+TGG | + | chr8.3:55496895-55496914 | MS.gene59757:intron | 25.0% |
| !!! | CAACATTTATTTTTCAGGTA+AGG | + | chr8.3:55496405-55496424 | MS.gene59757:intron | 25.0% |
| !!! | CGGTTTTATCATATGTTTTA+TGG | + | chr8.3:55498049-55498068 | MS.gene59757:intron | 25.0% |
| !!! | TGATGCAACATTTATTTTTC+AGG | + | chr8.3:55496400-55496419 | MS.gene59757:intron | 25.0% |
| !!! | TTTCTTTTGGGAACTTTAAA+TGG | + | chr8.3:55496860-55496879 | MS.gene59757:CDS | 25.0% |
| !!! | TTTTAAAATTGCAAAATCCG+AGG | + | chr8.3:55496430-55496449 | MS.gene59757:CDS | 25.0% |
| !!! | TTTTCCATTCCTTTATTTCA+TGG | + | chr8.3:55496098-55496117 | MS.gene59757:CDS | 25.0% |
| AAAACACCAATGACTATAAC+AGG | - | chr8.3:55496646-55496665 | None:intergenic | 30.0% | |
| AAAATGAATGAACCGTGTTT+AGG | - | chr8.3:55495482-55495501 | None:intergenic | 30.0% | |
| AAAGACCATTTATTTGGTCA+TGG | - | chr8.3:55497507-55497526 | None:intergenic | 30.0% | |
| AAGGAAGAAAAAGACCATAT+GGG | - | chr8.3:55499818-55499837 | None:intergenic | 30.0% | |
| AAGGAATAAACCTGTTGTAA+TGG | - | chr8.3:55498963-55498982 | None:intergenic | 30.0% | |
| AATAATTGGTCCTATAGTGT+TGG | + | chr8.3:55496250-55496269 | MS.gene59757:intron | 30.0% | |
| ACAAAGAGAAAACCTAAAGA+AGG | - | chr8.3:55498383-55498402 | None:intergenic | 30.0% | |
| ACTTTGACATCTGTATTATG+GGG | + | chr8.3:55496592-55496611 | MS.gene59757:CDS | 30.0% | |
| AGCAATGATAGATGACATAA+AGG | - | chr8.3:55498248-55498267 | None:intergenic | 30.0% | |
| ATAAAACCGAAGATACATAC+CGG | - | chr8.3:55498038-55498057 | None:intergenic | 30.0% | |
| ATATTTGGATATTTCTCTGC+TGG | - | chr8.3:55497654-55497673 | None:intergenic | 30.0% | |
| ATGAAAACCTCTTGATGAAT+TGG | + | chr8.3:55498221-55498240 | MS.gene59757:CDS | 30.0% | |
| CAAAAAGGATACTCAAAAAC+TGG | - | chr8.3:55496220-55496239 | None:intergenic | 30.0% | |
| CAATATATGGAAAAAGCTTG+TGG | + | chr8.3:55498597-55498616 | MS.gene59757:CDS | 30.0% | |
| GAAAAATGGAAATCCACATA+TGG | - | chr8.3:55497924-55497943 | None:intergenic | 30.0% | |
| GAACTTTGACATCTGTATTA+TGG | + | chr8.3:55496590-55496609 | MS.gene59757:CDS | 30.0% | |
| GACACTTAAGTATTCAACTA+TGG | + | chr8.3:55497896-55497915 | MS.gene59757:intron | 30.0% | |
| GCAATGATAGATGACATAAA+GGG | - | chr8.3:55498247-55498266 | None:intergenic | 30.0% | |
| GTATAGAAAAAATCTGCACA+TGG | - | chr8.3:55498721-55498740 | None:intergenic | 30.0% | |
| TAAGGAAGAAAAAGACCATA+TGG | - | chr8.3:55499819-55499838 | None:intergenic | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8.3:55498285-55498304 | MS.gene59757:CDS | 30.0% | |
| TCTGTTAGTCCTCTAAATTT+GGG | + | chr8.3:55498405-55498424 | MS.gene59757:CDS | 30.0% | |
| TGAATACTTAAGTGTCTGTT+TGG | - | chr8.3:55497892-55497911 | None:intergenic | 30.0% | |
| TGATAAAAGACTTCAAAGAG+TGG | - | chr8.3:55496507-55496526 | None:intergenic | 30.0% | |
| TGTAAATAAGCTCTTCCAAA+CGG | + | chr8.3:55499717-55499736 | MS.gene59757:intron | 30.0% | |
| TTACACACACAATATTCATG+AGG | - | chr8.3:55498820-55498839 | None:intergenic | 30.0% | |
| ! | AAATCTTTTCGTCATATGGA+TGG | + | chr8.3:55495209-55495228 | MS.gene59757:CDS | 30.0% |
| ! | AAGGTACAATTTCTTTTGGA+TGG | + | chr8.3:55496899-55496918 | MS.gene59757:intron | 30.0% |
| ! | AATTTTTCGTCTATTGCACT+AGG | + | chr8.3:55496960-55496979 | MS.gene59757:intron | 30.0% |
| ! | ATAAAACTCAAGGGTTTGTT+TGG | + | chr8.3:55497731-55497750 | MS.gene59757:intron | 30.0% |
| ! | ATATCACCTCGTTTTCATTT+TGG | + | chr8.3:55497805-55497824 | MS.gene59757:intron | 30.0% |
| ! | GGTCTTTTTCTTCCTTAATT+TGG | + | chr8.3:55499822-55499841 | MS.gene59757:CDS | 30.0% |
| ! | GTATTCTTTTCTATGGACTT+AGG | + | chr8.3:55498934-55498953 | MS.gene59757:intron | 30.0% |
| ! | TACTAACTTGTGAAATTCTC+AGG | + | chr8.3:55498540-55498559 | MS.gene59757:intron | 30.0% |
| ! | TTCTTCCTTAATTTGGTTGA+AGG | + | chr8.3:55499829-55499848 | MS.gene59757:CDS | 30.0% |
| !! | CACAAGCTTTTTCCATATAT+TGG | - | chr8.3:55498599-55498618 | None:intergenic | 30.0% |
| !! | CACATATTGATTTGGAAAAC+AGG | + | chr8.3:55499120-55499139 | MS.gene59757:intron | 30.0% |
| !! | GATTTTTAATGGATACACCT+TGG | - | chr8.3:55495194-55495213 | None:intergenic | 30.0% |
| !! | GTCTAGCTTTGTAATCTTAA+GGG | - | chr8.3:55499460-55499479 | None:intergenic | 30.0% |
| !! | TATAAACCATTTTGGGAATG+TGG | + | chr8.3:55499592-55499611 | MS.gene59757:intron | 30.0% |
| !! | TGTCTAGCTTTGTAATCTTA+AGG | - | chr8.3:55499461-55499480 | None:intergenic | 30.0% |
| !! | TTCTTTAGGTTTTCTCTTTG+TGG | + | chr8.3:55498382-55498401 | MS.gene59757:intron | 30.0% |
| !! | TTTTCAACTTCGGTTTGAAA+GGG | - | chr8.3:55497262-55497281 | None:intergenic | 30.0% |
| !!! | TCTTGTTTTCTCACAAAGTT+TGG | + | chr8.3:55499073-55499092 | MS.gene59757:intron | 30.0% |
| AAATCCCTGCATTTCTTACT+AGG | - | chr8.3:55495963-55495982 | None:intergenic | 35.0% | |
| AACTCCTGATATTATGAAGC+AGG | - | chr8.3:55497982-55498001 | None:intergenic | 35.0% | |
| AAGTGGTTGTTTGAGTGTTA+AGG | - | chr8.3:55499671-55499690 | None:intergenic | 35.0% | |
| AATACTCTTAACTCCGAGAT+TGG | - | chr8.3:55495430-55495449 | None:intergenic | 35.0% | |
| AATCCCTGCATTTCTTACTA+GGG | - | chr8.3:55495962-55495981 | None:intergenic | 35.0% | |
| ACACACAATATTCATGAGGA+TGG | - | chr8.3:55498816-55498835 | None:intergenic | 35.0% | |
| ACTATTGTGCATTTAACTGC+AGG | + | chr8.3:55499790-55499809 | MS.gene59757:intron | 35.0% | |
| ACTCCTGATATTATGAAGCA+GGG | - | chr8.3:55497981-55498000 | None:intergenic | 35.0% | |
| AGATCTTGAAAAAGTTCGTG+CGG | + | chr8.3:55495521-55495540 | MS.gene59757:intron | 35.0% | |
| AGCATAAGCCTGTTAAATAG+AGG | - | chr8.3:55497074-55497093 | None:intergenic | 35.0% | |
| ATAGTAGCTAATATCAGCCT+CGG | - | chr8.3:55496450-55496469 | None:intergenic | 35.0% | |
| ATGATGTTCAAACCATTCCT+TGG | + | chr8.3:55499865-55499884 | MS.gene59757:CDS | 35.0% | |
| ATTGAACCAGTTATGTATCC+AGG | - | chr8.3:55497003-55497022 | None:intergenic | 35.0% | |
| CAAGTCCTTCAACCAAATTA+AGG | - | chr8.3:55499837-55499856 | None:intergenic | 35.0% | |
| CGAAAACCTGTTATAGTCAT+TGG | + | chr8.3:55496637-55496656 | MS.gene59757:CDS | 35.0% | |
| CTCACCATGAAATAAAGGAA+TGG | - | chr8.3:55496105-55496124 | None:intergenic | 35.0% | |
| CTGTTAGTCCTCTAAATTTG+GGG | + | chr8.3:55498406-55498425 | MS.gene59757:CDS | 35.0% | |
| GAGTAACCAAAATGAAAACG+AGG | - | chr8.3:55497814-55497833 | None:intergenic | 35.0% | |
| GATGCTGAAGCTATAGAAAA+TGG | + | chr8.3:55498160-55498179 | MS.gene59757:CDS | 35.0% | |
| GGAACTTTAAATGGTGCAAT+TGG | + | chr8.3:55496869-55496888 | MS.gene59757:CDS | 35.0% | |
| GGTAATGTTCTTGCAATTAC+AGG | + | chr8.3:55498456-55498475 | MS.gene59757:CDS | 35.0% | |
| GTAAATAAGCTCTTCCAAAC+GGG | + | chr8.3:55499718-55499737 | MS.gene59757:intron | 35.0% | |
| GTCAACTTACTTATCCCAAA+AGG | - | chr8.3:55497691-55497710 | None:intergenic | 35.0% | |
| GTCTGTTAGTCCTCTAAATT+TGG | + | chr8.3:55498404-55498423 | MS.gene59757:CDS | 35.0% | |
| GTTTAACCACATTCCCAAAA+TGG | - | chr8.3:55499601-55499620 | None:intergenic | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | - | chr8.3:55495123-55495142 | None:intergenic | 35.0% | |
| TGAACTACCTTTCCTAAACA+CGG | + | chr8.3:55495467-55495486 | MS.gene59757:intron | 35.0% | |
| TGCAATTACAGGTGCATATT+CGG | + | chr8.3:55498467-55498486 | MS.gene59757:intron | 35.0% | |
| TGTTAGTCCTCTAAATTTGG+GGG | + | chr8.3:55498407-55498426 | MS.gene59757:CDS | 35.0% | |
| TTAACATTGCTCGAATCACA+GGG | + | chr8.3:55498625-55498644 | MS.gene59757:CDS | 35.0% | |
| TTAATCATTGGACCAGCATT+GGG | + | chr8.3:55497384-55497403 | MS.gene59757:CDS | 35.0% | |
| TTCAACTATGGTTCCATATG+TGG | + | chr8.3:55497908-55497927 | MS.gene59757:intron | 35.0% | |
| TTCCAAACGGGTATAATAAG+AGG | + | chr8.3:55499730-55499749 | MS.gene59757:intron | 35.0% | |
| TTTAATCATTGGACCAGCAT+TGG | + | chr8.3:55497383-55497402 | MS.gene59757:CDS | 35.0% | |
| ! | AACTTCACAACTGATGATGT+CGG | + | chr8.3:55498435-55498454 | MS.gene59757:CDS | 35.0% |
| ! | AATGGAAAAAGTGATGATGC+AGG | - | chr8.3:55496087-55496106 | None:intergenic | 35.0% |
| ! | AATTAGTTGAGCATTGTACC+TGG | - | chr8.3:55499407-55499426 | None:intergenic | 35.0% |
| ! | AGAGTACTCCTCTATTTAAC+AGG | + | chr8.3:55497063-55497082 | MS.gene59757:intron | 35.0% |
| ! | ATTAGTTGAGCATTGTACCT+GGG | - | chr8.3:55499406-55499425 | None:intergenic | 35.0% |
| ! | CTTAATTTGGTTGAAGGACT+TGG | + | chr8.3:55499835-55499854 | MS.gene59757:CDS | 35.0% |
| ! | GAACCCTTTGGAAAGATATT+TGG | - | chr8.3:55497669-55497688 | None:intergenic | 35.0% |
| ! | GTGTTTTCTTCTTTTCACCA+AGG | - | chr8.3:55499885-55499904 | None:intergenic | 35.0% |
| ! | GTTTTATGGTACGACATAAG+TGG | - | chr8.3:55499688-55499707 | None:intergenic | 35.0% |
| ! | TTCTTCTTTTCACCAAGGAA+TGG | - | chr8.3:55499880-55499899 | None:intergenic | 35.0% |
| !! | GTTTTCAACTTCGGTTTGAA+AGG | - | chr8.3:55497263-55497282 | None:intergenic | 35.0% |
| !!! | GATTTTTTAATGTGTGCACC+TGG | + | chr8.3:55496982-55497001 | MS.gene59757:intron | 35.0% |
| AAACAGGAACAACACCAAAG+AGG | + | chr8.3:55499136-55499155 | MS.gene59757:intron | 40.0% | |
| AACAGGAACAACACCAAAGA+GGG | + | chr8.3:55499137-55499156 | MS.gene59757:intron | 40.0% | |
| AAGGGGTAACTTTGCAACAA+TGG | - | chr8.3:55498743-55498762 | None:intergenic | 40.0% | |
| ACTTAGGTGACCATTACAAC+AGG | + | chr8.3:55498950-55498969 | MS.gene59757:intron | 40.0% | |
| AGCTTCAGCATCATCTATGA+TGG | - | chr8.3:55498152-55498171 | None:intergenic | 40.0% | |
| AGTACCCTAGTAAGAAATGC+AGG | + | chr8.3:55495955-55495974 | MS.gene59757:intron | 40.0% | |
| ATGCAACTATGCAAGTTAGG+TGG | - | chr8.3:55495882-55495901 | None:intergenic | 40.0% | |
| ATGTCTCTCTTCAAAGCCAT+TGG | + | chr8.3:55499187-55499206 | MS.gene59757:CDS | 40.0% | |
| CAAGCAAAAGAGCTTAACCA+AGG | + | chr8.3:55495174-55495193 | MS.gene59757:CDS | 40.0% | |
| CAATACTACAAGGATTGTCC+TGG | + | chr8.3:55495138-55495157 | MS.gene59757:CDS | 40.0% | |
| CATGCTTGCTTACCTTCTTT+AGG | + | chr8.3:55498368-55498387 | MS.gene59757:intron | 40.0% | |
| CCATCCAAAAACTCGTACTA+AGG | - | chr8.3:55496826-55496845 | None:intergenic | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8.3:55498761-55498780 | None:intergenic | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | - | chr8.3:55498760-55498779 | None:intergenic | 40.0% | |
| GAAACACTTCACAAGCACAA+TGG | + | chr8.3:55498115-55498134 | MS.gene59757:CDS | 40.0% | |
| GAATGAACCGTGTTTAGGAA+AGG | - | chr8.3:55495477-55495496 | None:intergenic | 40.0% | |
| GACATCTGTATTATGGGGAA+TGG | + | chr8.3:55496597-55496616 | MS.gene59757:CDS | 40.0% | |
| GACCTCTTATTATACCCGTT+TGG | - | chr8.3:55499735-55499754 | None:intergenic | 40.0% | |
| GCAATGCAACTATGCAAGTT+AGG | - | chr8.3:55495885-55495904 | None:intergenic | 40.0% | |
| GCTAATTGCTAATCCCACAT+TGG | + | chr8.3:55495785-55495804 | MS.gene59757:intron | 40.0% | |
| GCTGATATTAGCTACTATGC+TGG | + | chr8.3:55496452-55496471 | MS.gene59757:CDS | 40.0% | |
| GGAGAAGAAGCAATACTACA+AGG | + | chr8.3:55495128-55495147 | MS.gene59757:CDS | 40.0% | |
| GTACAACAGACCAACACTAT+AGG | - | chr8.3:55496263-55496282 | None:intergenic | 40.0% | |
| GTACCCTAGTAAGAAATGCA+GGG | + | chr8.3:55495956-55495975 | MS.gene59757:intron | 40.0% | |
| GTAGGATCATCATTCATGCT+TGG | + | chr8.3:55496565-55496584 | MS.gene59757:intron | 40.0% | |
| GTGATTCGAGCAATGTTAAC+AGG | - | chr8.3:55498624-55498643 | None:intergenic | 40.0% | |
| GTTAACATTGCTCGAATCAC+AGG | + | chr8.3:55498624-55498643 | MS.gene59757:CDS | 40.0% | |
| GTTAGTCCTCTAAATTTGGG+GGG | + | chr8.3:55498408-55498427 | MS.gene59757:CDS | 40.0% | |
| TAAAGGGCCAATTCATCAAG+AGG | - | chr8.3:55498231-55498250 | None:intergenic | 40.0% | |
| TAACATTGCTCGAATCACAG+GGG | + | chr8.3:55498626-55498645 | MS.gene59757:CDS | 40.0% | |
| TAGACAATCACTACTGCACT+AGG | + | chr8.3:55499508-55499527 | MS.gene59757:intron | 40.0% | |
| TAGTAGTTATTGCCTGCTTG+TGG | + | chr8.3:55498009-55498028 | MS.gene59757:CDS | 40.0% | |
| TGAATACACTTACCACTGCT+CGG | - | chr8.3:55498994-55499013 | None:intergenic | 40.0% | |
| TGGATTCCGGTATGTATCTT+CGG | + | chr8.3:55498029-55498048 | MS.gene59757:intron | 40.0% | |
| TGGGGAACAGGTTTAATCAT+TGG | + | chr8.3:55497372-55497391 | MS.gene59757:CDS | 40.0% | |
| TTATCCCAAAAGGAACCCTT+TGG | - | chr8.3:55497681-55497700 | None:intergenic | 40.0% | |
| TTCAATCCCCCCAAATTTAG+AGG | - | chr8.3:55498417-55498436 | None:intergenic | 40.0% | |
| TTGCCCTGCTTCATAATATC+AGG | + | chr8.3:55497975-55497994 | MS.gene59757:CDS | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | + | chr8.3:55499367-55499386 | MS.gene59757:CDS | 40.0% |
| ! | CTTGGTTAAGCTCTTTTGCT+TGG | - | chr8.3:55495176-55495195 | None:intergenic | 40.0% |
| ! | CTTTCCAAAGGGTTCCTTTT+GGG | + | chr8.3:55497674-55497693 | MS.gene59757:CDS | 40.0% |
| ! | GTCGTTCTCAACACACTTTT+CGG | + | chr8.3:55496800-55496819 | MS.gene59757:CDS | 40.0% |
| ! | TATGCATTTGAAGCTGCATC+AGG | + | chr8.3:55497224-55497243 | MS.gene59757:intron | 40.0% |
| ! | TCTTTCCAAAGGGTTCCTTT+TGG | + | chr8.3:55497673-55497692 | MS.gene59757:CDS | 40.0% |
| !! | CCTTAGTACGAGTTTTTGGA+TGG | + | chr8.3:55496823-55496842 | MS.gene59757:CDS | 40.0% |
| !! | GCTGATAGTGGCAAAAACTT+AGG | + | chr8.3:55497577-55497596 | MS.gene59757:intron | 40.0% |
| !! | GGGTTAGTTTCATCTGATTG+TGG | + | chr8.3:55498646-55498665 | MS.gene59757:intron | 40.0% |
| !! | GTCTAGCTCTGTGATCTTAA+GGG | - | chr8.3:55499493-55499512 | None:intergenic | 40.0% |
| !! | GTTTTAGGTAAGTGCAGCTT+GGG | + | chr8.3:55497353-55497372 | MS.gene59757:intron | 40.0% |
| !! | TGTCTAGCTCTGTGATCTTA+AGG | - | chr8.3:55499494-55499513 | None:intergenic | 40.0% |
| !! | TTTTAGGTAAGTGCAGCTTG+GGG | + | chr8.3:55497354-55497373 | MS.gene59757:intron | 40.0% |
| ACAGGAACAACACCAAAGAG+GGG | + | chr8.3:55499138-55499157 | MS.gene59757:intron | 45.0% | |
| ATGAAGCAGGGCAAGAAGTA+AGG | - | chr8.3:55497969-55497988 | None:intergenic | 45.0% | |
| CAAGGATTGTCCTGGTTGTA+AGG | + | chr8.3:55495146-55495165 | MS.gene59757:CDS | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8.3:55498758-55498777 | MS.gene59757:CDS | 45.0% | |
| CTTGAAAAAGTTCGTGCGGA+CGG | + | chr8.3:55495525-55495544 | MS.gene59757:intron | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8.3:55498762-55498781 | None:intergenic | 45.0% | |
| GGAATGGTTTCTGATCGCTA+TGG | + | chr8.3:55496613-55496632 | MS.gene59757:CDS | 45.0% | |
| TATTGCCTGCTTGTGGATTC+CGG | + | chr8.3:55498016-55498035 | MS.gene59757:CDS | 45.0% | |
| TGAAGCAGGGCAAGAAGTAA+GGG | - | chr8.3:55497968-55497987 | None:intergenic | 45.0% | |
| TGGTGCAATTGGACCAGTAA+AGG | + | chr8.3:55496880-55496899 | MS.gene59757:CDS | 45.0% | |
| TGTGCACCTGGATACATAAC+TGG | + | chr8.3:55496994-55497013 | MS.gene59757:intron | 45.0% | |
| TTTAACTGCAGGCACCCATA+TGG | + | chr8.3:55499801-55499820 | MS.gene59757:intron | 45.0% | |
| ! | AGCTACTATGCTGGCTATGT+AGG | + | chr8.3:55496461-55496480 | MS.gene59757:CDS | 45.0% |
| ! | CTATGCTGGCTATGTAGGTA+AGG | + | chr8.3:55496466-55496485 | MS.gene59757:intron | 45.0% |
| ! | GGGGACACAGTTTTCAACTT+CGG | - | chr8.3:55497272-55497291 | None:intergenic | 45.0% |
| ! | TCGGCCTTAGTACGAGTTTT+TGG | + | chr8.3:55496819-55496838 | MS.gene59757:CDS | 45.0% |
| ! | TGTTTTCGCTCGCAACGTAT+AGG | + | chr8.3:55495688-55495707 | MS.gene59757:intron | 45.0% |
| !! | AGTGTTGGTCTGTTGTACTG+TGG | + | chr8.3:55496265-55496284 | MS.gene59757:intron | 45.0% |
| !!! | GGTTTTAGGTAAGTGCAGCT+TGG | + | chr8.3:55497352-55497371 | MS.gene59757:intron | 45.0% |
| ACATACCGGAATCCACAAGC+AGG | - | chr8.3:55498024-55498043 | None:intergenic | 50.0% | |
| ATGGATGCTTCTTTCCTCCC+AGG | + | chr8.3:55499386-55499405 | MS.gene59757:CDS | 50.0% | |
| CCACTGCTCGGTTCTGTATA+AGG | - | chr8.3:55498982-55499001 | None:intergenic | 50.0% | |
| CCTTATACAGAACCGAGCAG+TGG | + | chr8.3:55498979-55498998 | MS.gene59757:CDS | 50.0% | |
| CGAGAAGAACACCAAGCTCT+AGG | + | chr8.3:55497106-55497125 | MS.gene59757:CDS | 50.0% | |
| CTGTTGAGAGTCCTAGAGCT+TGG | - | chr8.3:55497120-55497139 | None:intergenic | 50.0% | |
| GCATGTAGCGAGTCCAATCT+CGG | + | chr8.3:55495414-55495433 | MS.gene59757:intron | 50.0% | |
| GCTCTGTGATCTTAAGGGAG+TGG | - | chr8.3:55499488-55499507 | None:intergenic | 50.0% | |
| GCTTGGTCAACCTTACAACC+AGG | - | chr8.3:55495159-55495178 | None:intergenic | 50.0% | |
| TTCCATTAGCTGCCCCTCTT+TGG | - | chr8.3:55499153-55499172 | None:intergenic | 50.0% | |
| ! | ACCAGCATTGGGAGGCTATT+TGG | + | chr8.3:55497395-55497414 | MS.gene59757:CDS | 50.0% |
| ! | AGTTGAGCATTGTACCTGGG+AGG | - | chr8.3:55499403-55499422 | None:intergenic | 50.0% |
| ! | ATCATTGGACCAGCATTGGG+AGG | + | chr8.3:55497387-55497406 | MS.gene59757:CDS | 50.0% |
| ! | ATTGGGAGGCTATTTGGCTC+AGG | + | chr8.3:55497401-55497420 | MS.gene59757:CDS | 50.0% |
| ! | GTCAGTGTGTGTGCTGATAG+TGG | + | chr8.3:55497565-55497584 | MS.gene59757:intron | 50.0% |
| AAAGCCATTGGACCTGCTGC+TGG | + | chr8.3:55499199-55499218 | MS.gene59757:CDS | 55.0% | |
| CACATTGTACCACCAGCAGC+AGG | - | chr8.3:55499214-55499233 | None:intergenic | 55.0% | |
| CACCAAAGAGGGGCAGCTAA+TGG | + | chr8.3:55499148-55499167 | MS.gene59757:CDS | 55.0% | |
| GCCAAATAGCCTCCCAATGC+TGG | - | chr8.3:55497399-55497418 | None:intergenic | 55.0% | |
| GTAAGTGCAGCTTGGGGAAC+AGG | + | chr8.3:55497360-55497379 | MS.gene59757:CDS | 55.0% | |
| ACCACCAGCAGCAGGTCCAA+TGG | - | chr8.3:55499206-55499225 | None:intergenic | 60.0% | |
| GCCATTGGACCTGCTGCTGG+TGG | + | chr8.3:55499202-55499221 | MS.gene59757:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 55495111 | 55499924 | 55495111 | ID=MS.gene59757 |
| chr8.3 | mRNA | 55495111 | 55499924 | 55495111 | ID=MS.gene59757.t1;Parent=MS.gene59757 |
| chr8.3 | exon | 55495111 | 55495246 | 55495111 | ID=MS.gene59757.t1.exon1;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55495111 | 55495246 | 55495111 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55496079 | 55496119 | 55496079 | ID=MS.gene59757.t1.exon2;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55496079 | 55496119 | 55496079 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55496422 | 55496482 | 55496422 | ID=MS.gene59757.t1.exon3;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55496422 | 55496482 | 55496422 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55496569 | 55496671 | 55496569 | ID=MS.gene59757.t1.exon4;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55496569 | 55496671 | 55496569 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55496799 | 55496901 | 55496799 | ID=MS.gene59757.t1.exon5;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55496799 | 55496901 | 55496799 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55497085 | 55497138 | 55497085 | ID=MS.gene59757.t1.exon6;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55497085 | 55497138 | 55497085 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55497360 | 55497422 | 55497360 | ID=MS.gene59757.t1.exon7;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55497360 | 55497422 | 55497360 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55497651 | 55497700 | 55497651 | ID=MS.gene59757.t1.exon8;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55497651 | 55497700 | 55497651 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55497962 | 55498037 | 55497962 | ID=MS.gene59757.t1.exon9;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55497962 | 55498037 | 55497962 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55498115 | 55498306 | 55498115 | ID=MS.gene59757.t1.exon10;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55498115 | 55498306 | 55498115 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55498390 | 55498477 | 55498390 | ID=MS.gene59757.t1.exon11;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55498390 | 55498477 | 55498390 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55498562 | 55498647 | 55498562 | ID=MS.gene59757.t1.exon12;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55498562 | 55498647 | 55498562 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55498728 | 55498835 | 55498728 | ID=MS.gene59757.t1.exon13;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55498728 | 55498835 | 55498728 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55498956 | 55499000 | 55498956 | ID=MS.gene59757.t1.exon14;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55498956 | 55499000 | 55498956 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55499142 | 55499230 | 55499142 | ID=MS.gene59757.t1.exon15;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55499142 | 55499230 | 55499142 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55499364 | 55499407 | 55499364 | ID=MS.gene59757.t1.exon16;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55499364 | 55499407 | 55499364 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| chr8.3 | exon | 55499812 | 55499924 | 55499812 | ID=MS.gene59757.t1.exon17;Parent=MS.gene59757.t1 |
| chr8.3 | CDS | 55499812 | 55499924 | 55499812 | ID=cds.MS.gene59757.t1;Parent=MS.gene59757.t1 |
| Gene Sequence |
| Protein sequence |
