Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78670.t1 | XP_013445183.1 | 96.9 | 483 | 14 | 1 | 1 | 483 | 6 | 487 | 3.90E-264 | 920.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78670.t1 | Q94BZ1 | 57.1 | 476 | 198 | 3 | 3 | 476 | 7 | 478 | 3.3e-155 | 549.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78670.t1 | A0A072TNX0 | 96.9 | 483 | 14 | 1 | 1 | 483 | 6 | 487 | 2.8e-264 | 920.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78670.t1 | MTR_8g042770 | 96.894 | 483 | 14 | 1 | 1 | 483 | 6 | 487 | 0.0 | 956 |
| MS.gene78670.t1 | MTR_8g042780 | 80.705 | 482 | 89 | 2 | 2 | 483 | 3 | 480 | 0.0 | 820 |
| MS.gene78670.t1 | MTR_8g042870 | 79.710 | 483 | 94 | 2 | 1 | 483 | 6 | 484 | 0.0 | 791 |
| MS.gene78670.t1 | MTR_8g042780 | 80.324 | 432 | 81 | 2 | 2 | 433 | 3 | 430 | 0.0 | 732 |
| MS.gene78670.t1 | MTR_3g010820 | 70.564 | 479 | 139 | 2 | 6 | 483 | 10 | 487 | 0.0 | 721 |
| MS.gene78670.t1 | MTR_8g062990 | 69.520 | 479 | 144 | 2 | 6 | 483 | 10 | 487 | 0.0 | 712 |
| MS.gene78670.t1 | MTR_3g086440 | 70.288 | 451 | 132 | 2 | 1 | 451 | 6 | 454 | 0.0 | 659 |
| MS.gene78670.t1 | MTR_3g010850 | 65.328 | 473 | 160 | 1 | 3 | 475 | 6 | 474 | 0.0 | 651 |
| MS.gene78670.t1 | MTR_3g010850 | 64.545 | 440 | 152 | 1 | 36 | 475 | 27 | 462 | 0.0 | 592 |
| MS.gene78670.t1 | MTR_8g042820 | 78.873 | 284 | 56 | 2 | 149 | 432 | 34 | 313 | 2.48e-162 | 462 |
| MS.gene78670.t1 | MTR_1157s0010 | 81.875 | 160 | 29 | 0 | 324 | 483 | 1 | 160 | 3.99e-89 | 269 |
| MS.gene78670.t1 | MTR_1194s0010 | 80.952 | 147 | 28 | 0 | 2 | 148 | 3 | 149 | 9.58e-86 | 260 |
| MS.gene78670.t1 | MTR_8g075280 | 48.958 | 96 | 32 | 3 | 36 | 130 | 105 | 184 | 1.25e-14 | 73.2 |
| MS.gene78670.t1 | MTR_8g075280 | 48.958 | 96 | 32 | 3 | 36 | 130 | 105 | 184 | 3.91e-14 | 73.2 |
| MS.gene78670.t1 | MTR_2g025290 | 62.264 | 53 | 19 | 1 | 228 | 280 | 1 | 52 | 5.16e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78670.t1 | AT5G13750 | 57.143 | 476 | 198 | 3 | 3 | 476 | 7 | 478 | 0.0 | 574 |
| MS.gene78670.t1 | AT3G43790 | 54.008 | 474 | 212 | 3 | 2 | 473 | 7 | 476 | 0.0 | 542 |
| MS.gene78670.t1 | AT3G43790 | 54.008 | 474 | 212 | 3 | 2 | 473 | 7 | 476 | 0.0 | 542 |
| MS.gene78670.t1 | AT5G13740 | 53.638 | 481 | 217 | 2 | 2 | 476 | 6 | 486 | 0.0 | 535 |
| MS.gene78670.t1 | AT3G43790 | 53.333 | 480 | 212 | 4 | 2 | 473 | 7 | 482 | 0.0 | 535 |
| MS.gene78670.t1 | AT3G43790 | 53.333 | 480 | 212 | 4 | 2 | 473 | 7 | 482 | 0.0 | 535 |
| MS.gene78670.t1 | AT5G13740 | 54.233 | 437 | 194 | 2 | 2 | 432 | 6 | 442 | 1.58e-172 | 493 |
| MS.gene78670.t1 | AT5G13750 | 56.203 | 395 | 168 | 2 | 84 | 476 | 1 | 392 | 9.83e-165 | 471 |
| MS.gene78670.t1 | AT5G13750 | 54.523 | 409 | 180 | 3 | 3 | 409 | 7 | 411 | 2.51e-164 | 471 |
| MS.gene78670.t1 | AT5G13750 | 54.523 | 409 | 180 | 3 | 3 | 409 | 7 | 411 | 2.51e-164 | 471 |
| MS.gene78670.t1 | AT3G43790 | 53.102 | 403 | 183 | 3 | 2 | 402 | 7 | 405 | 1.17e-155 | 448 |
Find 98 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGTTAGTCCTCTAAATT+TGG | 0.111977 | 8.4:+56796759 | MS.gene78670:CDS |
| GAACCCTTTGGGAAGATATT+TGG | 0.162767 | 8.4:-56795981 | None:intergenic |
| GAACTTTGACATCTGTATTA+TGG | 0.179763 | 8.4:+56794905 | MS.gene78670:CDS |
| TGTTATCACAAGATTTCTTT+TGG | 0.235759 | 8.4:+56795162 | MS.gene78670:CDS |
| AAAAGAAATTGTACCTTTAC+TGG | 0.246053 | 8.4:-56795208 | None:intergenic |
| CCACTGCTCGGTTCTGTAAA+AGG | 0.259682 | 8.4:-56797334 | None:intergenic |
| ACCAGCATTGGGAGGCTATT+TGG | 0.277904 | 8.4:+56795711 | MS.gene78670:CDS |
| CTTAATTTGGTTGAAGGACT+TGG | 0.297066 | 8.4:+56798302 | MS.gene78670:CDS |
| GATGCTGAAGCTATAGAAAA+TGG | 0.297671 | 8.4:+56796515 | MS.gene78670:CDS |
| ACTTACAATATACCAATATA+TGG | 0.310859 | 8.4:+56796939 | MS.gene78670:CDS |
| AACTTTGACATCTGTATTAT+GGG | 0.312954 | 8.4:+56794906 | MS.gene78670:CDS |
| TCTGTTAGTCCTCTAAATTT+GGG | 0.313936 | 8.4:+56796760 | MS.gene78670:CDS |
| ATGAAAACCTCTTGATGAAT+TGG | 0.315223 | 8.4:+56796576 | MS.gene78670:CDS |
| TTCCATTAGCTGCTCCTCTT+TGG | 0.329427 | 8.4:-56797505 | None:intergenic |
| TTGCCCTGCTTCATAATATC+AGG | 0.334714 | 8.4:+56796330 | MS.gene78670:CDS |
| GGTAATGTTCTTGCAATTAC+AGG | 0.337198 | 8.4:+56796811 | MS.gene78670:CDS |
| TCTTCCCAAAGGGTTCCTTT+TGG | 0.345913 | 8.4:+56795988 | MS.gene78670:CDS |
| CAAGTCCTTCAACCAAATTA+AGG | 0.346986 | 8.4:-56798301 | None:intergenic |
| TATTGCCTGCTTGTGGATTC+CGG | 0.349430 | 8.4:+56796371 | MS.gene78670:CDS |
| TTCTTCCTTAATTTGGTTGA+AGG | 0.351724 | 8.4:+56798296 | MS.gene78670:CDS |
| GTAAGTGCAGCTTGGGGAAC+AGG | 0.372551 | 8.4:+56795676 | MS.gene78670:CDS |
| GGAACTTTAAATGGTGCAAT+TGG | 0.374218 | 8.4:+56795184 | MS.gene78670:CDS |
| AAAACACCAATGACTATAAC+AGG | 0.374710 | 8.4:-56794958 | None:intergenic |
| AGCAATGATAGATGACATAA+AGG | 0.379944 | 8.4:-56796600 | None:intergenic |
| ATAAACTCACCATGAAATAA+AGG | 0.383235 | 8.4:-56794418 | None:intergenic |
| CAAGGATTGTCCTGGTTGTA+AGG | 0.386628 | 8.4:+56793488 | MS.gene78670:CDS |
| TGGGGAACAGGTTTAATCAT+TGG | 0.389285 | 8.4:+56795688 | MS.gene78670:CDS |
| TTATCCCAAAAGGAACCCTT+TGG | 0.410150 | 8.4:-56795993 | None:intergenic |
| CGAAAACCTGTTATAGTCAT+TGG | 0.412171 | 8.4:+56794952 | MS.gene78670:CDS |
| GTGATTCGAGCAATGTTAAC+AGG | 0.415919 | 8.4:-56796976 | None:intergenic |
| ATGTCTCTATTCAAAGCTAT+TGG | 0.422437 | 8.4:+56797542 | MS.gene78670:CDS |
| ATATTTGGATATTTCTCTGC+TGG | 0.424114 | 8.4:-56795966 | None:intergenic |
| CACCAAAGAGGAGCAGCTAA+TGG | 0.424168 | 8.4:+56797503 | MS.gene78670:CDS |
| GCCAAATAGCCTCCCAATGC+TGG | 0.444343 | 8.4:-56795712 | None:intergenic |
| TTAATCATTGGACCAGCATT+GGG | 0.448070 | 8.4:+56795700 | MS.gene78670:CDS |
| TATAGAAAATGGAAGCATAA+AGG | 0.454633 | 8.4:+56796526 | MS.gene78670:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8.4:+56797113 | MS.gene78670:CDS |
| TTTAATCATTGGACCAGCAT+TGG | 0.458138 | 8.4:+56795699 | MS.gene78670:CDS |
| AACTCCTGATATTATGAAGC+AGG | 0.459270 | 8.4:-56796334 | None:intergenic |
| GTTAACATTGCTCGAATCAC+AGG | 0.464230 | 8.4:+56796979 | MS.gene78670:CDS |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8.4:-56797114 | None:intergenic |
| AAGGAATAAACCTGTTGTAA+TGG | 0.468522 | 8.4:-56797315 | None:intergenic |
| AGCTACTATGCTGGCTATGT+AGG | 0.471772 | 8.4:+56794776 | MS.gene78670:CDS |
| ATGATGTTCAAACCATTCCT+TGG | 0.480456 | 8.4:+56798332 | MS.gene78670:CDS |
| CGAGAAGAACACCAAGCTCT+AGG | 0.480505 | 8.4:+56795421 | MS.gene78670:CDS |
| ATGAAGCAGGGCAAGAAGTA+AGG | 0.481618 | 8.4:-56796321 | None:intergenic |
| TATCCCAAAAGGAACCCTTT+GGG | 0.481863 | 8.4:-56795992 | None:intergenic |
| GACATCTGTATTATGGGGAA+TGG | 0.486093 | 8.4:+56794912 | MS.gene78670:CDS |
| ATTGGGAGGCTATTTGGCTC+AGG | 0.486506 | 8.4:+56795717 | MS.gene78670:CDS |
| TTTAACTGCAGGCACCCATA+TGG | 0.489334 | 8.4:+56798268 | MS.gene78670:intron |
| TTCCACTTACTTATCCCAAA+AGG | 0.492777 | 8.4:-56796003 | None:intergenic |
| AGCTTCAGCATCATCTATGA+TGG | 0.493611 | 8.4:-56796504 | None:intergenic |
| CTGTTAGTCCTCTAAATTTG+GGG | 0.496551 | 8.4:+56796761 | MS.gene78670:CDS |
| TATATTGGTATATTGTAAGT+TGG | 0.500955 | 8.4:-56796936 | None:intergenic |
| AAATATGAGAGAGCCATTGT+TGG | 0.503789 | 8.4:+56793449 | None:intergenic |
| ACTTAGGTGACCATTACAAC+AGG | 0.504930 | 8.4:+56797305 | MS.gene78670:intron |
| TGGTGCAATTGGACCAGTAA+AGG | 0.511905 | 8.4:+56795195 | MS.gene78670:CDS |
| TATTGCTTCTTCTCCAACAA+TGG | 0.512437 | 8.4:-56793462 | None:intergenic |
| TAGTAGTTATTGCCTGCTTG+TGG | 0.513431 | 8.4:+56796364 | MS.gene78670:CDS |
| GCAATGATAGATGACATAAA+GGG | 0.520373 | 8.4:-56796599 | None:intergenic |
| ATGGATGCTTCTTTCCTCCC+AGG | 0.527092 | 8.4:+56797994 | MS.gene78670:CDS |
| CTGTTGAGAGTCCTAGAGCT+TGG | 0.540220 | 8.4:-56795432 | None:intergenic |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8.4:-56797113 | None:intergenic |
| AAGGGGTAACTTTGCAACAA+TGG | 0.549893 | 8.4:-56797095 | None:intergenic |
| TATCCAAATATCTTCCCAAA+GGG | 0.551270 | 8.4:+56795978 | MS.gene78670:CDS |
| AAAGCTATTGGACCTGCCGC+AGG | 0.553060 | 8.4:+56797554 | MS.gene78670:CDS |
| GTAGGATCATCATTCATGCT+TGG | 0.553411 | 8.4:+56794880 | MS.gene78670:intron |
| GTTAGTCCTCTAAATTTGGG+GGG | 0.555025 | 8.4:+56796763 | MS.gene78670:CDS |
| TGTTAGTCCTCTAAATTTGG+GGG | 0.556819 | 8.4:+56796762 | MS.gene78670:CDS |
| CACATTGTACCACCTGCGGC+AGG | 0.564825 | 8.4:-56797566 | None:intergenic |
| CAATACTACAAGGATTGTCC+TGG | 0.565609 | 8.4:+56793480 | MS.gene78670:CDS |
| TTGGTCAATACAGATTAACT+TGG | 0.565896 | 8.4:+56797959 | MS.gene78670:intron |
| TAAAGGGCCAATTCATCAAG+AGG | 0.566648 | 8.4:-56796583 | None:intergenic |
| ACACACAATATTCATGAGGA+TGG | 0.568497 | 8.4:-56797168 | None:intergenic |
| ATAGTAGCTAATATCAGCCT+CGG | 0.569820 | 8.4:-56794762 | None:intergenic |
| TTAACATTGCTCGAATCACA+GGG | 0.570393 | 8.4:+56796980 | MS.gene78670:CDS |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8.4:+56797975 | MS.gene78670:CDS |
| CTCACCATGAAATAAAGGAA+TGG | 0.574296 | 8.4:-56794413 | None:intergenic |
| TCATGATATTGCTTATCAAG+AGG | 0.581145 | 8.4:+56796640 | MS.gene78670:CDS |
| ATCATTGGACCAGCATTGGG+AGG | 0.595293 | 8.4:+56795703 | MS.gene78670:CDS |
| TGAATACACTCACCACTGCT+CGG | 0.596647 | 8.4:-56797346 | None:intergenic |
| ACTCCTGATATTATGAAGCA+GGG | 0.598947 | 8.4:-56796333 | None:intergenic |
| GCTTGGTCAACCTTACAACC+AGG | 0.599602 | 8.4:-56793498 | None:intergenic |
| GCTGATATTAGCTACTATGC+TGG | 0.603154 | 8.4:+56794767 | MS.gene78670:CDS |
| ATATCCAAATATCTTCCCAA+AGG | 0.607464 | 8.4:+56795977 | MS.gene78670:CDS |
| GGAATGGTTTCTGATCGCTA+TGG | 0.618861 | 8.4:+56794928 | MS.gene78670:CDS |
| GCTATTGGACCTGCCGCAGG+TGG | 0.624900 | 8.4:+56797557 | MS.gene78670:CDS |
| AACTCACATTGTACCACCTG+CGG | 0.630586 | 8.4:-56797570 | None:intergenic |
| AAACAGGAACAACACCAAAG+AGG | 0.630869 | 8.4:+56797491 | MS.gene78670:intron |
| ACTTTGACATCTGTATTATG+GGG | 0.630925 | 8.4:+56794907 | MS.gene78670:CDS |
| AACTTCACAACTGATGATGT+CGG | 0.634201 | 8.4:+56796790 | MS.gene78670:CDS |
| GGAGAAGAAGCAATACTACA+AGG | 0.641228 | 8.4:+56793470 | MS.gene78670:CDS |
| ACATACCGGAATCCACAAGC+AGG | 0.647969 | 8.4:-56796376 | None:intergenic |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8.4:-56797112 | None:intergenic |
| TTACACACACAATATTCATG+AGG | 0.676661 | 8.4:-56797172 | None:intergenic |
| GAAACACTTCACAAGCACAA+TGG | 0.697668 | 8.4:+56796470 | MS.gene78670:CDS |
| CAAGCAAAAGAGCTTAACCA+AGG | 0.710227 | 8.4:+56793516 | MS.gene78670:CDS |
| TAACATTGCTCGAATCACAG+GGG | 0.777198 | 8.4:+56796981 | MS.gene78670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATGAAAATGAAAT+TGG | - | chr8.4:56794448-56794467 | None:intergenic | 10.0% |
| !! | ATAATTAAAATTGTGATATA+TGG | + | chr8.4:56795639-56795658 | MS.gene78670:intron | 10.0% |
| !!! | AATATTAAGAATACAATTTT+TGG | + | chr8.4:56794651-56794670 | MS.gene78670:intron | 10.0% |
| !!! | ATTTTTTATTTTGAAGAAAA+TGG | - | chr8.4:56797383-56797402 | None:intergenic | 10.0% |
| !!! | CTTATTATATATATGTTTTT+TGG | + | chr8.4:56796695-56796714 | MS.gene78670:intron | 10.0% |
| !! | TTATTCATATACATACAAAA+AGG | - | chr8.4:56794546-56794565 | None:intergenic | 15.0% |
| !! | TTTGTATGTATATGAATAAT+TGG | + | chr8.4:56794547-56794566 | MS.gene78670:intron | 15.0% |
| !!! | ACTGATTATATCATTTTTTA+TGG | + | chr8.4:56797282-56797301 | MS.gene78670:intron | 15.0% |
| !!! | AGAGTTTAAGATATATTAAA+TGG | + | chr8.4:56797240-56797259 | MS.gene78670:intron | 15.0% |
| !!! | CACAATTTTAATTATTATGA+TGG | - | chr8.4:56795634-56795653 | None:intergenic | 15.0% |
| !!! | GGTAAATTTTTTAATCAATA+AGG | + | chr8.4:56796661-56796680 | MS.gene78670:intron | 15.0% |
| !!! | GTTTTATAAAATTGAAAAGT+AGG | - | chr8.4:56796033-56796052 | None:intergenic | 15.0% |
| !!! | TTACAGTTAATTTAGTTTTA+TGG | - | chr8.4:56798169-56798188 | None:intergenic | 15.0% |
| !!! | TTCAATTTTATAAAACTCAA+GGG | + | chr8.4:56796037-56796056 | MS.gene78670:intron | 15.0% |
| !!! | TTTCAATTTTATAAAACTCA+AGG | + | chr8.4:56796036-56796055 | MS.gene78670:intron | 15.0% |
| !! | ACTTACAATATACCAATATA+TGG | + | chr8.4:56796939-56796958 | MS.gene78670:CDS | 20.0% |
| !! | ATAAAATCAAAGATACATAC+CGG | - | chr8.4:56796393-56796412 | None:intergenic | 20.0% |
| !! | ATGATATAATCAGTCAAATT+TGG | - | chr8.4:56797276-56797295 | None:intergenic | 20.0% |
| !! | ATTAATCTCTCTAATACTTT+GGG | + | chr8.4:56795927-56795946 | MS.gene78670:intron | 20.0% |
| !! | ATTAGCATGTAGTTATAAAT+TGG | - | chr8.4:56797732-56797751 | None:intergenic | 20.0% |
| !! | ATTTCAAAAGACCATTTATT+TGG | - | chr8.4:56795828-56795847 | None:intergenic | 20.0% |
| !! | CTGTATTGTTAAAACTAAAA+GGG | - | chr8.4:56795607-56795626 | None:intergenic | 20.0% |
| !! | TAACTTTCTTCTTATGATAT+TGG | + | chr8.4:56797940-56797959 | MS.gene78670:intron | 20.0% |
| !! | TATATTGGTATATTGTAAGT+TGG | - | chr8.4:56796939-56796958 | None:intergenic | 20.0% |
| !! | TATCATAAGAAGAAAGTTAA+AGG | - | chr8.4:56797939-56797958 | None:intergenic | 20.0% |
| !! | TATTCAATTGAAAAGTTTGA+AGG | + | chr8.4:56795771-56795790 | MS.gene78670:intron | 20.0% |
| !! | TGTAAAAAGAGAAAAAATGT+GGG | + | chr8.4:56793919-56793938 | MS.gene78670:intron | 20.0% |
| !! | TGTATTGTTAAAACTAAAAG+GGG | - | chr8.4:56795606-56795625 | None:intergenic | 20.0% |
| !! | TTGTAAAAAGAGAAAAAATG+TGG | + | chr8.4:56793918-56793937 | MS.gene78670:intron | 20.0% |
| !!! | AAATGATTTGTTGTGAAAAA+TGG | - | chr8.4:56796292-56796311 | None:intergenic | 20.0% |
| !!! | AACATTTATTTTTCAGGTAA+GGG | + | chr8.4:56794721-56794740 | MS.gene78670:intron | 20.0% |
| !!! | AATTGTGATATATGGTTTTA+TGG | + | chr8.4:56795647-56795666 | MS.gene78670:intron | 20.0% |
| !!! | ATATATGGTTTTATGGTTTT+AGG | + | chr8.4:56795654-56795673 | MS.gene78670:intron | 20.0% |
| !!! | ATATCATTTTTTATGGACTT+AGG | + | chr8.4:56797289-56797308 | MS.gene78670:intron | 20.0% |
| !!! | TAAGAATACAATTTTTGGTT+AGG | + | chr8.4:56794656-56794675 | MS.gene78670:intron | 20.0% |
| !!! | TATGACGAAAAGATTTTTAA+TGG | - | chr8.4:56793547-56793566 | None:intergenic | 20.0% |
| !!! | TTAAAAATCTTTTCGTCATA+TGG | + | chr8.4:56793547-56793566 | MS.gene78670:CDS | 20.0% |
| !!! | TTGAATGTAGATTTCTAAAA+AGG | + | chr8.4:56797623-56797642 | MS.gene78670:intron | 20.0% |
| ! | AAAAACTTGTCAATTGCAAA+TGG | - | chr8.4:56797856-56797875 | None:intergenic | 25.0% |
| ! | AAAAGAAATTGTACCTTTAC+TGG | - | chr8.4:56795211-56795230 | None:intergenic | 25.0% |
| ! | AAATAATTAGCTATCCAATG+TGG | - | chr8.4:56794113-56794132 | None:intergenic | 25.0% |
| ! | AACTTTGACATCTGTATTAT+GGG | + | chr8.4:56794906-56794925 | MS.gene78670:CDS | 25.0% |
| ! | AAGTCCTAATGAACAAAAAT+TGG | - | chr8.4:56793653-56793672 | None:intergenic | 25.0% |
| ! | AATAATTAGCTATCCAATGT+GGG | - | chr8.4:56794112-56794131 | None:intergenic | 25.0% |
| ! | ATAAACTCACCATGAAATAA+AGG | - | chr8.4:56794421-56794440 | None:intergenic | 25.0% |
| ! | ATCCACATATGATTAAATGA+TGG | - | chr8.4:56796267-56796286 | None:intergenic | 25.0% |
| ! | ATGATGATTGAAAATGTTGT+AGG | + | chr8.4:56794862-56794881 | MS.gene78670:intron | 25.0% |
| ! | CAATTGCAAATGGATAAAAA+AGG | - | chr8.4:56797846-56797865 | None:intergenic | 25.0% |
| ! | CATTAATCTCTCTAATACTT+TGG | + | chr8.4:56795926-56795945 | MS.gene78670:intron | 25.0% |
| ! | CTCTCAATATTAGTCATAAA+TGG | - | chr8.4:56797224-56797243 | None:intergenic | 25.0% |
| ! | GCTGTATTGTTAAAACTAAA+AGG | - | chr8.4:56795608-56795627 | None:intergenic | 25.0% |
| ! | TAATTGTTTAAACTACATGC+AGG | + | chr8.4:56796448-56796467 | MS.gene78670:intron | 25.0% |
| ! | TCAATTGAATACAAAGTTTC+AGG | - | chr8.4:56795762-56795781 | None:intergenic | 25.0% |
| ! | TGCTAATCTTCTTTATGATA+TGG | + | chr8.4:56797745-56797764 | MS.gene78670:intron | 25.0% |
| !! | AAGCACTTATAAACCATTTT+GGG | + | chr8.4:56798052-56798071 | MS.gene78670:intron | 25.0% |
| !! | ACAAACTTTTGCCTAAATAA+AGG | - | chr8.4:56793902-56793921 | None:intergenic | 25.0% |
| !! | ATTTTCCATGACCAAATAAA+TGG | + | chr8.4:56795814-56795833 | MS.gene78670:intron | 25.0% |
| !! | CATTTGAGTTTCCTTTATTT+AGG | + | chr8.4:56793888-56793907 | MS.gene78670:intron | 25.0% |
| !! | CTTTCCAATTTTTGTTCATT+AGG | + | chr8.4:56793646-56793665 | MS.gene78670:intron | 25.0% |
| !! | GTTATCACAAGATTTCTTTT+GGG | + | chr8.4:56795163-56795182 | MS.gene78670:CDS | 25.0% |
| !! | TAAGCACTTATAAACCATTT+TGG | + | chr8.4:56798051-56798070 | MS.gene78670:intron | 25.0% |
| !! | TATAGAAAATGGAAGCATAA+AGG | + | chr8.4:56796526-56796545 | MS.gene78670:CDS | 25.0% |
| !! | TGTTATCACAAGATTTCTTT+TGG | + | chr8.4:56795162-56795181 | MS.gene78670:CDS | 25.0% |
| !! | TTCACAACAAATCATTTTAC+AGG | + | chr8.4:56796295-56796314 | MS.gene78670:intron | 25.0% |
| !!! | AGTAAAGGTACAATTTCTTT+TGG | + | chr8.4:56795210-56795229 | MS.gene78670:intron | 25.0% |
| !!! | ATATCACCTCTTTTTCATTT+TGG | + | chr8.4:56796120-56796139 | MS.gene78670:intron | 25.0% |
| !!! | CAACATTTATTTTTCAGGTA+AGG | + | chr8.4:56794720-56794739 | MS.gene78670:intron | 25.0% |
| !!! | GGAATTTTGACATATTGATT+TGG | + | chr8.4:56797467-56797486 | MS.gene78670:intron | 25.0% |
| !!! | TACTAACTTGTGAAATTTTC+AGG | + | chr8.4:56796895-56796914 | MS.gene78670:intron | 25.0% |
| !!! | TGCAACAACATTTATTTTTC+AGG | + | chr8.4:56794715-56794734 | MS.gene78670:intron | 25.0% |
| !!! | TTTCTTTTGGGAACTTTAAA+TGG | + | chr8.4:56795175-56795194 | MS.gene78670:CDS | 25.0% |
| !!! | TTTTAAAATTGCAAAATCCG+AGG | + | chr8.4:56794745-56794764 | MS.gene78670:CDS | 25.0% |
| !!! | TTTTCCATTCCTTTATTTCA+TGG | + | chr8.4:56794409-56794428 | MS.gene78670:CDS | 25.0% |
| AAAACACCAATGACTATAAC+AGG | - | chr8.4:56794961-56794980 | None:intergenic | 30.0% | |
| AAAGACCATTTATTTGGTCA+TGG | - | chr8.4:56795822-56795841 | None:intergenic | 30.0% | |
| AACAAACAATCATGTTTCAG+AGG | - | chr8.4:56797772-56797791 | None:intergenic | 30.0% | |
| AAGGAAGAAAAAGACCATAT+GGG | - | chr8.4:56798285-56798304 | None:intergenic | 30.0% | |
| AAGGAATAAACCTGTTGTAA+TGG | - | chr8.4:56797318-56797337 | None:intergenic | 30.0% | |
| ACAAAGAGAAAACCTAAAGA+AGG | - | chr8.4:56796738-56796757 | None:intergenic | 30.0% | |
| ACTTTGACATCTGTATTATG+GGG | + | chr8.4:56794907-56794926 | MS.gene78670:CDS | 30.0% | |
| AGCAATGATAGATGACATAA+AGG | - | chr8.4:56796603-56796622 | None:intergenic | 30.0% | |
| ATATCCAAATATCTTCCCAA+AGG | + | chr8.4:56795977-56795996 | MS.gene78670:CDS | 30.0% | |
| ATATTTGGATATTTCTCTGC+TGG | - | chr8.4:56795969-56795988 | None:intergenic | 30.0% | |
| ATGAAAACCTCTTGATGAAT+TGG | + | chr8.4:56796576-56796595 | MS.gene78670:CDS | 30.0% | |
| ATGTCTCTATTCAAAGCTAT+TGG | + | chr8.4:56797542-56797561 | MS.gene78670:CDS | 30.0% | |
| CAAAAAGGATACTCAAAAAC+TGG | - | chr8.4:56794531-56794550 | None:intergenic | 30.0% | |
| CAATATATGGAAAAAGCTTG+TGG | + | chr8.4:56796952-56796971 | MS.gene78670:CDS | 30.0% | |
| GAACTTTGACATCTGTATTA+TGG | + | chr8.4:56794905-56794924 | MS.gene78670:CDS | 30.0% | |
| GACTGATAGAAAAACAAGAT+GGG | - | chr8.4:56796245-56796264 | None:intergenic | 30.0% | |
| GAGTAACCAAAATGAAAAAG+AGG | - | chr8.4:56796129-56796148 | None:intergenic | 30.0% | |
| GCAATGATAGATGACATAAA+GGG | - | chr8.4:56796602-56796621 | None:intergenic | 30.0% | |
| GTATAGAAAAAATCTGCACA+TGG | - | chr8.4:56797076-56797095 | None:intergenic | 30.0% | |
| GTCCATCATTTAATCATATG+TGG | + | chr8.4:56796262-56796281 | MS.gene78670:intron | 30.0% | |
| TAAGGAAGAAAAAGACCATA+TGG | - | chr8.4:56798286-56798305 | None:intergenic | 30.0% | |
| TAGGTGAAGATGTTGAAAAT+AGG | + | chr8.4:56794033-56794052 | MS.gene78670:intron | 30.0% | |
| TATCCAAATATCTTCCCAAA+GGG | + | chr8.4:56795978-56795997 | MS.gene78670:CDS | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8.4:56796640-56796659 | MS.gene78670:CDS | 30.0% | |
| TCTGTTAGTCCTCTAAATTT+GGG | + | chr8.4:56796760-56796779 | MS.gene78670:CDS | 30.0% | |
| TGATAAAAGACTTCAAAGAG+TGG | - | chr8.4:56794822-56794841 | None:intergenic | 30.0% | |
| TGTAAATAAGCTCTTCCAAA+CGG | + | chr8.4:56798184-56798203 | MS.gene78670:intron | 30.0% | |
| TTACACACACAATATTCATG+AGG | - | chr8.4:56797175-56797194 | None:intergenic | 30.0% | |
| TTGGTCAATACAGATTAACT+TGG | + | chr8.4:56797959-56797978 | MS.gene78670:intron | 30.0% | |
| ! | AAATCTTTTCGTCATATGGA+TGG | + | chr8.4:56793551-56793570 | MS.gene78670:CDS | 30.0% |
| ! | AAGGTACAATTTCTTTTGGA+TGG | + | chr8.4:56795214-56795233 | MS.gene78670:intron | 30.0% |
| ! | AATTTTTCGTCTATTGCACT+AGG | + | chr8.4:56795275-56795294 | MS.gene78670:intron | 30.0% |
| ! | ATAAAACTCAAGGGTTTGTT+TGG | + | chr8.4:56796046-56796065 | MS.gene78670:intron | 30.0% |
| ! | GGTCTTTTTCTTCCTTAATT+TGG | + | chr8.4:56798289-56798308 | MS.gene78670:CDS | 30.0% |
| ! | TTCTTCCTTAATTTGGTTGA+AGG | + | chr8.4:56798296-56798315 | MS.gene78670:CDS | 30.0% |
| !! | CACAAGCTTTTTCCATATAT+TGG | - | chr8.4:56796954-56796973 | None:intergenic | 30.0% |
| !! | GACATATTGATTTGGAAAAC+AGG | + | chr8.4:56797475-56797494 | MS.gene78670:intron | 30.0% |
| !! | GATTTTTAATGGATACACCT+TGG | - | chr8.4:56793536-56793555 | None:intergenic | 30.0% |
| !! | TATAAACCATTTTGGGAATG+TGG | + | chr8.4:56798059-56798078 | MS.gene78670:intron | 30.0% |
| !! | TTCTTTAGGTTTTCTCTTTG+TGG | + | chr8.4:56796737-56796756 | MS.gene78670:intron | 30.0% |
| !! | TTTTCAACTTCGGTTTGAAA+GGG | - | chr8.4:56795577-56795596 | None:intergenic | 30.0% |
| AAAAAATGTGGGTGTGTATG+TGG | + | chr8.4:56793930-56793949 | MS.gene78670:intron | 35.0% | |
| AAATCCCTGCATTTCTTACT+AGG | - | chr8.4:56794274-56794293 | None:intergenic | 35.0% | |
| AACTCCTGATATTATGAAGC+AGG | - | chr8.4:56796337-56796356 | None:intergenic | 35.0% | |
| AAGTGGTTGTTTGAGTGTTA+AGG | - | chr8.4:56798138-56798157 | None:intergenic | 35.0% | |
| AATCCCTGCATTTCTTACTA+GGG | - | chr8.4:56794273-56794292 | None:intergenic | 35.0% | |
| ACACACAATATTCATGAGGA+TGG | - | chr8.4:56797171-56797190 | None:intergenic | 35.0% | |
| ACTATTGTGCATTTAACTGC+AGG | + | chr8.4:56798257-56798276 | MS.gene78670:intron | 35.0% | |
| ACTCCTGATATTATGAAGCA+GGG | - | chr8.4:56796336-56796355 | None:intergenic | 35.0% | |
| AGACACTAAGGATTCAACTA+TGG | + | chr8.4:56796217-56796236 | MS.gene78670:intron | 35.0% | |
| AGAGATTAATACTCCGAGAT+TGG | - | chr8.4:56793772-56793791 | None:intergenic | 35.0% | |
| AGCATAAGCCTGTTAAATAG+AGG | - | chr8.4:56795389-56795408 | None:intergenic | 35.0% | |
| ATAATTGGTCCTGTAAGTGT+TGG | + | chr8.4:56794562-56794581 | MS.gene78670:intron | 35.0% | |
| ATAGTAGCTAATATCAGCCT+CGG | - | chr8.4:56794765-56794784 | None:intergenic | 35.0% | |
| ATGATGTTCAAACCATTCCT+TGG | + | chr8.4:56798332-56798351 | MS.gene78670:CDS | 35.0% | |
| ATTGAACCAGTTATGTATGC+AGG | - | chr8.4:56795318-56795337 | None:intergenic | 35.0% | |
| CAAGTCCTTCAACCAAATTA+AGG | - | chr8.4:56798304-56798323 | None:intergenic | 35.0% | |
| CATGCTTGTTTACCTTCTTT+AGG | + | chr8.4:56796723-56796742 | MS.gene78670:intron | 35.0% | |
| CGAAAACCTGTTATAGTCAT+TGG | + | chr8.4:56794952-56794971 | MS.gene78670:CDS | 35.0% | |
| CTCACCATGAAATAAAGGAA+TGG | - | chr8.4:56794416-56794435 | None:intergenic | 35.0% | |
| CTGTTAGTCCTCTAAATTTG+GGG | + | chr8.4:56796761-56796780 | MS.gene78670:CDS | 35.0% | |
| GAACTTGCACATTAATGTAC+AGG | + | chr8.4:56797677-56797696 | MS.gene78670:intron | 35.0% | |
| GATGCTGAAGCTATAGAAAA+TGG | + | chr8.4:56796515-56796534 | MS.gene78670:CDS | 35.0% | |
| GGAACTTTAAATGGTGCAAT+TGG | + | chr8.4:56795184-56795203 | MS.gene78670:CDS | 35.0% | |
| GGACTGATAGAAAAACAAGA+TGG | - | chr8.4:56796246-56796265 | None:intergenic | 35.0% | |
| GGTAATGTTCTTGCAATTAC+AGG | + | chr8.4:56796811-56796830 | MS.gene78670:CDS | 35.0% | |
| GTAAATAAGCTCTTCCAAAC+GGG | + | chr8.4:56798185-56798204 | MS.gene78670:intron | 35.0% | |
| GTCTGTTAGTCCTCTAAATT+TGG | + | chr8.4:56796759-56796778 | MS.gene78670:CDS | 35.0% | |
| GTTAAAACTAAAAGGGGACA+CGG | - | chr8.4:56795600-56795619 | None:intergenic | 35.0% | |
| GTTTAACCACATTCCCAAAA+TGG | - | chr8.4:56798068-56798087 | None:intergenic | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | - | chr8.4:56793465-56793484 | None:intergenic | 35.0% | |
| TGCAATTACAGGTGCATATT+CGG | + | chr8.4:56796822-56796841 | MS.gene78670:intron | 35.0% | |
| TGTTAGTCCTCTAAATTTGG+GGG | + | chr8.4:56796762-56796781 | MS.gene78670:CDS | 35.0% | |
| TTAACATTGCTCGAATCACA+GGG | + | chr8.4:56796980-56796999 | MS.gene78670:CDS | 35.0% | |
| TTAATCATTGGACCAGCATT+GGG | + | chr8.4:56795700-56795719 | MS.gene78670:CDS | 35.0% | |
| TTCCAAACGGGTATAATAAG+AGG | + | chr8.4:56798197-56798216 | MS.gene78670:intron | 35.0% | |
| TTCCACTTACTTATCCCAAA+AGG | - | chr8.4:56796006-56796025 | None:intergenic | 35.0% | |
| TTGAATCCTTAGTGTCTGTT+TGG | - | chr8.4:56796214-56796233 | None:intergenic | 35.0% | |
| TTTAATCATTGGACCAGCAT+TGG | + | chr8.4:56795699-56795718 | MS.gene78670:CDS | 35.0% | |
| ! | AACTTCACAACTGATGATGT+CGG | + | chr8.4:56796790-56796809 | MS.gene78670:CDS | 35.0% |
| ! | AATGGAAAAAGTGATGATGC+AGG | - | chr8.4:56794398-56794417 | None:intergenic | 35.0% |
| ! | AGAGTACTCCTCTATTTAAC+AGG | + | chr8.4:56795378-56795397 | MS.gene78670:intron | 35.0% |
| ! | CTTAATTTGGTTGAAGGACT+TGG | + | chr8.4:56798302-56798321 | MS.gene78670:CDS | 35.0% |
| ! | GTGTTTTCTTCTTTTCACCA+AGG | - | chr8.4:56798352-56798371 | None:intergenic | 35.0% |
| ! | GTTTTATGGTACGACATAAG+TGG | - | chr8.4:56798155-56798174 | None:intergenic | 35.0% |
| ! | TTCTTCTTTTCACCAAGGAA+TGG | - | chr8.4:56798347-56798366 | None:intergenic | 35.0% |
| !! | GTTTTCAACTTCGGTTTGAA+AGG | - | chr8.4:56795578-56795597 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGGGATAAGTAAG+TGG | + | chr8.4:56796001-56796020 | MS.gene78670:intron | 35.0% |
| AAACAGGAACAACACCAAAG+AGG | + | chr8.4:56797491-56797510 | MS.gene78670:intron | 40.0% | |
| AAGGGGTAACTTTGCAACAA+TGG | - | chr8.4:56797098-56797117 | None:intergenic | 40.0% | |
| ACTTAGGTGACCATTACAAC+AGG | + | chr8.4:56797305-56797324 | MS.gene78670:intron | 40.0% | |
| AGCTTCAGCATCATCTATGA+TGG | - | chr8.4:56796507-56796526 | None:intergenic | 40.0% | |
| AGTACCCTAGTAAGAAATGC+AGG | + | chr8.4:56794266-56794285 | MS.gene78670:intron | 40.0% | |
| ATGCAACTATGCAAGTTAGG+TGG | - | chr8.4:56794193-56794212 | None:intergenic | 40.0% | |
| CAAGCAAAAGAGCTTAACCA+AGG | + | chr8.4:56793516-56793535 | MS.gene78670:CDS | 40.0% | |
| CAATACTACAAGGATTGTCC+TGG | + | chr8.4:56793480-56793499 | MS.gene78670:CDS | 40.0% | |
| CCATCCAAAAACTCGTACTA+AGG | - | chr8.4:56795141-56795160 | None:intergenic | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8.4:56797116-56797135 | None:intergenic | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | - | chr8.4:56797115-56797134 | None:intergenic | 40.0% | |
| CTGATACCAAACAGACACTA+AGG | + | chr8.4:56796205-56796224 | MS.gene78670:intron | 40.0% | |
| GAAACACTTCACAAGCACAA+TGG | + | chr8.4:56796470-56796489 | MS.gene78670:CDS | 40.0% | |
| GACATCTGTATTATGGGGAA+TGG | + | chr8.4:56794912-56794931 | MS.gene78670:CDS | 40.0% | |
| GACCTCTTATTATACCCGTT+TGG | - | chr8.4:56798202-56798221 | None:intergenic | 40.0% | |
| GCAATGCAACTATGCAAGTT+AGG | - | chr8.4:56794196-56794215 | None:intergenic | 40.0% | |
| GCTAATTGCTAATCCCACAT+TGG | + | chr8.4:56794096-56794115 | MS.gene78670:intron | 40.0% | |
| GCTGATATTAGCTACTATGC+TGG | + | chr8.4:56794767-56794786 | MS.gene78670:CDS | 40.0% | |
| GGAGAAGAAGCAATACTACA+AGG | + | chr8.4:56793470-56793489 | MS.gene78670:CDS | 40.0% | |
| GTACCCTAGTAAGAAATGCA+GGG | + | chr8.4:56794267-56794286 | MS.gene78670:intron | 40.0% | |
| GTAGGATCATCATTCATGCT+TGG | + | chr8.4:56794880-56794899 | MS.gene78670:intron | 40.0% | |
| GTGATTCGAGCAATGTTAAC+AGG | - | chr8.4:56796979-56796998 | None:intergenic | 40.0% | |
| GTTAACATTGCTCGAATCAC+AGG | + | chr8.4:56796979-56796998 | MS.gene78670:CDS | 40.0% | |
| GTTAGTCCTCTAAATTTGGG+GGG | + | chr8.4:56796763-56796782 | MS.gene78670:CDS | 40.0% | |
| TAAAGGGCCAATTCATCAAG+AGG | - | chr8.4:56796586-56796605 | None:intergenic | 40.0% | |
| TAACATTGCTCGAATCACAG+GGG | + | chr8.4:56796981-56797000 | MS.gene78670:CDS | 40.0% | |
| TACAACAGACCAACACTTAC+AGG | - | chr8.4:56794574-56794593 | None:intergenic | 40.0% | |
| TAGTAGTTATTGCCTGCTTG+TGG | + | chr8.4:56796364-56796383 | MS.gene78670:CDS | 40.0% | |
| TATCCCAAAAGGAACCCTTT+GGG | - | chr8.4:56795995-56796014 | None:intergenic | 40.0% | |
| TGGGGAACAGGTTTAATCAT+TGG | + | chr8.4:56795688-56795707 | MS.gene78670:CDS | 40.0% | |
| TTATCCCAAAAGGAACCCTT+TGG | - | chr8.4:56795996-56796015 | None:intergenic | 40.0% | |
| TTCAATCCCCCCAAATTTAG+AGG | - | chr8.4:56796772-56796791 | None:intergenic | 40.0% | |
| TTGCCCTGCTTCATAATATC+AGG | + | chr8.4:56796330-56796349 | MS.gene78670:CDS | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | + | chr8.4:56797975-56797994 | MS.gene78670:CDS | 40.0% |
| ! | CTTGGTTAAGCTCTTTTGCT+TGG | - | chr8.4:56793518-56793537 | None:intergenic | 40.0% |
| ! | GAACCCTTTGGGAAGATATT+TGG | - | chr8.4:56795984-56796003 | None:intergenic | 40.0% |
| ! | GTCGTTCTCAACACACTTTT+TGG | + | chr8.4:56795115-56795134 | MS.gene78670:CDS | 40.0% |
| ! | TATGCATTTGAAGCTGCATC+AGG | + | chr8.4:56795539-56795558 | MS.gene78670:intron | 40.0% |
| !! | CCTTAGTACGAGTTTTTGGA+TGG | + | chr8.4:56795138-56795157 | MS.gene78670:CDS | 40.0% |
| !! | GCTGATAGTGGCAAAAACAT+AGG | + | chr8.4:56795892-56795911 | MS.gene78670:intron | 40.0% |
| !! | GGGTTAGTTTCATCTGATTG+TGG | + | chr8.4:56797001-56797020 | MS.gene78670:intron | 40.0% |
| !! | GTTTTAGGTAAGTGCAGCTT+GGG | + | chr8.4:56795669-56795688 | MS.gene78670:intron | 40.0% |
| !! | TTTTAGGTAAGTGCAGCTTG+GGG | + | chr8.4:56795670-56795689 | MS.gene78670:intron | 40.0% |
| !!! | TTGGCCTTAGTACGAGTTTT+TGG | + | chr8.4:56795134-56795153 | MS.gene78670:CDS | 40.0% |
| AACTCACATTGTACCACCTG+CGG | - | chr8.4:56797573-56797592 | None:intergenic | 45.0% | |
| ATGAAGCAGGGCAAGAAGTA+AGG | - | chr8.4:56796324-56796343 | None:intergenic | 45.0% | |
| CAAGGATTGTCCTGGTTGTA+AGG | + | chr8.4:56793488-56793507 | MS.gene78670:CDS | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8.4:56797113-56797132 | MS.gene78670:CDS | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8.4:56797117-56797136 | None:intergenic | 45.0% | |
| GGAATGGTTTCTGATCGCTA+TGG | + | chr8.4:56794928-56794947 | MS.gene78670:CDS | 45.0% | |
| TATTGCCTGCTTGTGGATTC+CGG | + | chr8.4:56796371-56796390 | MS.gene78670:CDS | 45.0% | |
| TGAATACACTCACCACTGCT+CGG | - | chr8.4:56797349-56797368 | None:intergenic | 45.0% | |
| TGGTGCAATTGGACCAGTAA+AGG | + | chr8.4:56795195-56795214 | MS.gene78670:CDS | 45.0% | |
| TGTGCACCTGCATACATAAC+TGG | + | chr8.4:56795309-56795328 | MS.gene78670:intron | 45.0% | |
| TTCCATTAGCTGCTCCTCTT+TGG | - | chr8.4:56797508-56797527 | None:intergenic | 45.0% | |
| TTTAACTGCAGGCACCCATA+TGG | + | chr8.4:56798268-56798287 | MS.gene78670:intron | 45.0% | |
| ! | AGCTACTATGCTGGCTATGT+AGG | + | chr8.4:56794776-56794795 | MS.gene78670:CDS | 45.0% |
| ! | CTATGCTGGCTATGTAGGTA+AGG | + | chr8.4:56794781-56794800 | MS.gene78670:intron | 45.0% |
| ! | CTTCCCAAAGGGTTCCTTTT+GGG | + | chr8.4:56795989-56796008 | MS.gene78670:CDS | 45.0% |
| ! | TCTTCCCAAAGGGTTCCTTT+TGG | + | chr8.4:56795988-56796007 | MS.gene78670:CDS | 45.0% |
| ! | TGCTTTTGAGCATCCTACCT+GGG | - | chr8.4:56798014-56798033 | None:intergenic | 45.0% |
| ! | TGTTTTCGCTCGCAACGTAT+AGG | + | chr8.4:56794014-56794033 | MS.gene78670:intron | 45.0% |
| !! | AGTGTTGGTCTGTTGTACTG+TGG | + | chr8.4:56794577-56794596 | MS.gene78670:intron | 45.0% |
| !! | TTGCTTTTGAGCATCCTACC+TGG | - | chr8.4:56798015-56798034 | None:intergenic | 45.0% |
| !!! | GGTTTTAGGTAAGTGCAGCT+TGG | + | chr8.4:56795668-56795687 | MS.gene78670:intron | 45.0% |
| ACATACCGGAATCCACAAGC+AGG | - | chr8.4:56796379-56796398 | None:intergenic | 50.0% | |
| ATGCTTCTTTCCTCCCAGGT+AGG | + | chr8.4:56797998-56798017 | MS.gene78670:intron | 50.0% | |
| ATGGATGCTTCTTTCCTCCC+AGG | + | chr8.4:56797994-56798013 | MS.gene78670:CDS | 50.0% | |
| CACCAAAGAGGAGCAGCTAA+TGG | + | chr8.4:56797503-56797522 | MS.gene78670:CDS | 50.0% | |
| CCACTGCTCGGTTCTGTAAA+AGG | - | chr8.4:56797337-56797356 | None:intergenic | 50.0% | |
| CGAGAAGAACACCAAGCTCT+AGG | + | chr8.4:56795421-56795440 | MS.gene78670:CDS | 50.0% | |
| CTGTTGAGAGTCCTAGAGCT+TGG | - | chr8.4:56795435-56795454 | None:intergenic | 50.0% | |
| GCATGTAGCGAGTCCAATCT+CGG | + | chr8.4:56793756-56793775 | MS.gene78670:intron | 50.0% | |
| GCTTGGTCAACCTTACAACC+AGG | - | chr8.4:56793501-56793520 | None:intergenic | 50.0% | |
| ! | ACCAGCATTGGGAGGCTATT+TGG | + | chr8.4:56795711-56795730 | MS.gene78670:CDS | 50.0% |
| ! | ATCATTGGACCAGCATTGGG+AGG | + | chr8.4:56795703-56795722 | MS.gene78670:CDS | 50.0% |
| ! | ATTGGGAGGCTATTTGGCTC+AGG | + | chr8.4:56795717-56795736 | MS.gene78670:CDS | 50.0% |
| ! | CCTTTTACAGAACCGAGCAG+TGG | + | chr8.4:56797334-56797353 | MS.gene78670:CDS | 50.0% |
| ! | GGGGACACGGTTTTCAACTT+CGG | - | chr8.4:56795587-56795606 | None:intergenic | 50.0% |
| ! | GTCAGTGTGTGTGCTGATAG+TGG | + | chr8.4:56795880-56795899 | MS.gene78670:intron | 50.0% |
| ! | TTTTGAGCATCCTACCTGGG+AGG | - | chr8.4:56798011-56798030 | None:intergenic | 50.0% |
| AAAGCTATTGGACCTGCCGC+AGG | + | chr8.4:56797554-56797573 | MS.gene78670:CDS | 55.0% | |
| GCCAAATAGCCTCCCAATGC+TGG | - | chr8.4:56795715-56795734 | None:intergenic | 55.0% | |
| GTAAGTGCAGCTTGGGGAAC+AGG | + | chr8.4:56795676-56795695 | MS.gene78670:CDS | 55.0% | |
| CACATTGTACCACCTGCGGC+AGG | - | chr8.4:56797569-56797588 | None:intergenic | 60.0% | |
| GCTATTGGACCTGCCGCAGG+TGG | + | chr8.4:56797557-56797576 | MS.gene78670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 56793453 | 56798391 | 56793453 | ID=MS.gene78670 |
| chr8.4 | mRNA | 56793453 | 56798391 | 56793453 | ID=MS.gene78670.t1;Parent=MS.gene78670 |
| chr8.4 | exon | 56793453 | 56793588 | 56793453 | ID=MS.gene78670.t1.exon1;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56793453 | 56793588 | 56793453 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56794390 | 56794430 | 56794390 | ID=MS.gene78670.t1.exon2;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56794390 | 56794430 | 56794390 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56794737 | 56794797 | 56794737 | ID=MS.gene78670.t1.exon3;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56794737 | 56794797 | 56794737 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56794884 | 56794986 | 56794884 | ID=MS.gene78670.t1.exon4;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56794884 | 56794986 | 56794884 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56795114 | 56795216 | 56795114 | ID=MS.gene78670.t1.exon5;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56795114 | 56795216 | 56795114 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56795400 | 56795453 | 56795400 | ID=MS.gene78670.t1.exon6;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56795400 | 56795453 | 56795400 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56795676 | 56795738 | 56795676 | ID=MS.gene78670.t1.exon7;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56795676 | 56795738 | 56795676 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56795966 | 56796015 | 56795966 | ID=MS.gene78670.t1.exon8;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56795966 | 56796015 | 56795966 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56796317 | 56796392 | 56796317 | ID=MS.gene78670.t1.exon9;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56796317 | 56796392 | 56796317 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56796470 | 56796661 | 56796470 | ID=MS.gene78670.t1.exon10;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56796470 | 56796661 | 56796470 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56796745 | 56796832 | 56796745 | ID=MS.gene78670.t1.exon11;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56796745 | 56796832 | 56796745 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56796917 | 56797002 | 56796917 | ID=MS.gene78670.t1.exon12;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56796917 | 56797002 | 56796917 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56797083 | 56797190 | 56797083 | ID=MS.gene78670.t1.exon13;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56797083 | 56797190 | 56797083 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56797311 | 56797355 | 56797311 | ID=MS.gene78670.t1.exon14;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56797311 | 56797355 | 56797311 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56797497 | 56797585 | 56797497 | ID=MS.gene78670.t1.exon15;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56797497 | 56797585 | 56797497 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56797972 | 56798015 | 56797972 | ID=MS.gene78670.t1.exon16;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56797972 | 56798015 | 56797972 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| chr8.4 | exon | 56798279 | 56798391 | 56798279 | ID=MS.gene78670.t1.exon17;Parent=MS.gene78670.t1 |
| chr8.4 | CDS | 56798279 | 56798391 | 56798279 | ID=cds.MS.gene78670.t1;Parent=MS.gene78670.t1 |
| Gene Sequence |
| Protein sequence |
