Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59760.t1 | XP_013445188.1 | 96.9 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 4.50E-246 | 860.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59760.t1 | Q8RWN2 | 54.9 | 455 | 195 | 2 | 4 | 448 | 3 | 457 | 2.7e-146 | 520.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59760.t1 | A0A072TNX5 | 96.9 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 3.3e-246 | 860.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene59760 | 0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene050400 | MS.gene59760 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene59760 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene59760 | 0.868709 | 5.34E-66 | -1.69E-46 |
| MS.gene052310 | MS.gene59760 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene59760 | 0.864332 | 1.31E-64 | -1.69E-46 |
| MS.gene052414 | MS.gene59760 | 0.815688 | 8.13E-52 | -1.69E-46 |
| MS.gene052469 | MS.gene59760 | 0.837059 | 6.50E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene59760 | 0.802089 | 6.62E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene59760 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene59760 | 0.843868 | 1.08E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene59760 | -0.817447 | 3.28E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene59760 | 0.846102 | 2.68E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene59760 | 0.816611 | 5.06E-52 | -1.69E-46 |
| MS.gene056233 | MS.gene59760 | 0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene59760 | 0.801695 | 7.97E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene59760 | 0.826708 | 2.34E-54 | -1.69E-46 |
| MS.gene056719 | MS.gene59760 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene59760 | 0.830333 | 3.12E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene59760 | 0.80969 | 1.67E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene59760 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene59760 | 0.810049 | 1.40E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene59760 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene59760 | 0.819137 | 1.36E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene59760 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene59760 | 0.802123 | 6.51E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene59760 | 0.827327 | 1.66E-54 | -1.69E-46 |
| MS.gene059788 | MS.gene59760 | 0.826827 | 2.19E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene59760 | 0.837042 | 6.56E-57 | -1.69E-46 |
| MS.gene060717 | MS.gene59760 | 0.80835 | 3.23E-50 | -1.69E-46 |
| MS.gene061231 | MS.gene59760 | 0.804375 | 2.23E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59760.t1 | MTR_8g042870 | 96.875 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 0.0 | 894 |
| MS.gene59760.t1 | MTR_8g042780 | 86.878 | 442 | 58 | 0 | 7 | 448 | 3 | 444 | 0.0 | 813 |
| MS.gene59760.t1 | MTR_8g042780 | 86.215 | 428 | 59 | 0 | 7 | 434 | 3 | 430 | 0.0 | 781 |
| MS.gene59760.t1 | MTR_8g042770 | 79.823 | 451 | 88 | 1 | 1 | 448 | 1 | 451 | 0.0 | 769 |
| MS.gene59760.t1 | MTR_3g010820 | 69.690 | 452 | 132 | 2 | 1 | 448 | 1 | 451 | 0.0 | 672 |
| MS.gene59760.t1 | MTR_8g062990 | 68.764 | 461 | 134 | 3 | 1 | 452 | 1 | 460 | 0.0 | 671 |
| MS.gene59760.t1 | MTR_3g086440 | 69.401 | 451 | 134 | 2 | 1 | 448 | 1 | 450 | 0.0 | 642 |
| MS.gene59760.t1 | MTR_3g010850 | 65.625 | 448 | 148 | 2 | 4 | 448 | 2 | 446 | 0.0 | 600 |
| MS.gene59760.t1 | MTR_3g010850 | 68.250 | 400 | 121 | 2 | 52 | 448 | 38 | 434 | 0.0 | 555 |
| MS.gene59760.t1 | MTR_8g042820 | 86.786 | 280 | 37 | 0 | 154 | 433 | 34 | 313 | 0.0 | 509 |
| MS.gene59760.t1 | MTR_1194s0010 | 85.714 | 147 | 21 | 0 | 7 | 153 | 3 | 149 | 1.47e-90 | 272 |
| MS.gene59760.t1 | MTR_1157s0010 | 87.097 | 124 | 16 | 0 | 325 | 448 | 1 | 124 | 9.71e-72 | 224 |
| MS.gene59760.t1 | MTR_8g075280 | 33.158 | 190 | 93 | 7 | 42 | 230 | 106 | 262 | 1.10e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59760.t1 | AT5G13750 | 56.319 | 451 | 192 | 4 | 1 | 448 | 1 | 449 | 0.0 | 540 |
| MS.gene59760.t1 | AT5G13740 | 55.022 | 458 | 195 | 3 | 1 | 448 | 1 | 457 | 0.0 | 534 |
| MS.gene59760.t1 | AT5G13740 | 55.079 | 443 | 188 | 3 | 1 | 433 | 1 | 442 | 3.27e-180 | 511 |
| MS.gene59760.t1 | AT3G43790 | 51.613 | 465 | 212 | 3 | 1 | 455 | 1 | 462 | 4.78e-179 | 509 |
| MS.gene59760.t1 | AT3G43790 | 51.613 | 465 | 212 | 3 | 1 | 455 | 1 | 462 | 4.78e-179 | 509 |
| MS.gene59760.t1 | AT3G43790 | 51.974 | 456 | 211 | 2 | 1 | 451 | 1 | 453 | 8.71e-179 | 509 |
| MS.gene59760.t1 | AT3G43790 | 51.974 | 456 | 211 | 2 | 1 | 451 | 1 | 453 | 8.71e-179 | 509 |
| MS.gene59760.t1 | AT5G13750 | 53.753 | 413 | 186 | 4 | 1 | 410 | 1 | 411 | 8.57e-165 | 471 |
| MS.gene59760.t1 | AT5G13750 | 53.753 | 413 | 186 | 4 | 1 | 410 | 1 | 411 | 8.57e-165 | 471 |
| MS.gene59760.t1 | AT5G13750 | 57.025 | 363 | 153 | 2 | 89 | 448 | 1 | 363 | 1.47e-154 | 444 |
| MS.gene59760.t1 | AT3G43790 | 50.000 | 408 | 196 | 2 | 1 | 403 | 1 | 405 | 1.97e-151 | 437 |
| MS.gene59760.t1 | AT5G13940 | 41.558 | 77 | 29 | 1 | 272 | 348 | 11 | 71 | 8.00e-14 | 74.3 |
| MS.gene59760.t1 | AT5G13940 | 41.558 | 77 | 29 | 1 | 272 | 348 | 162 | 222 | 1.12e-13 | 73.9 |
Find 102 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCCTTCCTTTATTTCA+TGG | 0.165001 | 8.3:+55442236 | MS.gene59760:CDS |
| GGTGATGTTCTTTCAATTTC+AGG | 0.192163 | 8.3:+55444812 | MS.gene59760:CDS |
| CCCAGCAATAGGAGGCTATT+TGG | 0.240770 | 8.3:+55443640 | MS.gene59760:CDS |
| AGTTACTATGCTGGTTATAT+TGG | 0.247965 | 8.3:+55442971 | MS.gene59760:CDS |
| ATTGTCTTGGCCCGCATCAC+TGG | 0.268959 | 8.3:+55444990 | MS.gene59760:CDS |
| CGAAAACCTGTATTAATAAT+GGG | 0.292773 | 8.3:+55443147 | MS.gene59760:CDS |
| TTTCTTCTCGGAGGTTTAAA+TGG | 0.293841 | 8.3:+55443333 | MS.gene59760:CDS |
| GCCAAATAGCCTCCTATTGC+TGG | 0.306470 | 8.3:-55443641 | None:intergenic |
| TCGAAAACCTGTATTAATAA+TGG | 0.307777 | 8.3:+55443146 | MS.gene59760:CDS |
| GTAAAGCAGGGCAAGAAGTA+TGG | 0.308634 | 8.3:-55444099 | None:intergenic |
| GATGTTTCACAGCTGTATTA+TGG | 0.319545 | 8.3:+55443100 | MS.gene59760:CDS |
| TTCCATTAGCTGCTCCTCTT+TGG | 0.329427 | 8.3:-55445478 | None:intergenic |
| TAAAGCTTCGGCATCGCCTT+TGG | 0.341814 | 8.3:-55444501 | None:intergenic |
| CTACTAGTCCTCTGAGGCTA+GGG | 0.343324 | 8.3:+55444762 | MS.gene59760:CDS |
| AATACTAATCACAATGTATA+AGG | 0.356429 | 8.3:-55445163 | None:intergenic |
| CGAGAAGAGCACCAAGCTAT+AGG | 0.358397 | 8.3:+55443487 | MS.gene59760:CDS |
| ATTTCAGGTTAGTGCAGCTT+GGG | 0.360083 | 8.3:+55443598 | MS.gene59760:intron |
| GCAATGATAGATGACATTAA+AGG | 0.367674 | 8.3:-55444584 | None:intergenic |
| TTGTCTTGGCCCGCATCACT+GGG | 0.372666 | 8.3:+55444991 | MS.gene59760:CDS |
| ATGTTTCACAGCTGTATTAT+GGG | 0.376227 | 8.3:+55443101 | MS.gene59760:CDS |
| TTAATTGTTGGCCCAGCAAT+AGG | 0.378147 | 8.3:+55443629 | MS.gene59760:CDS |
| ATAAACTCACCATGAAATAA+AGG | 0.383235 | 8.3:-55442245 | None:intergenic |
| ATAATCCCCATTATTAATAC+AGG | 0.384478 | 8.3:-55443153 | None:intergenic |
| ATATTTGGGTATTTGTCTAC+TGG | 0.396680 | 8.3:-55443936 | None:intergenic |
| CAGTAGCAATCGTCTGCATC+TGG | 0.399008 | 8.3:+55444142 | MS.gene59760:CDS |
| TTACAGCAATAACATTCTTA+AGG | 0.400756 | 8.3:-55445194 | None:intergenic |
| CACATTATTCGGCCTTAGTA+CGG | 0.407588 | 8.3:+55443284 | MS.gene59760:CDS |
| GTTAGTGCAGCTTGGGGCAT+AGG | 0.410852 | 8.3:+55443605 | MS.gene59760:CDS |
| CACCAAAGAGGAGCAGCTAA+TGG | 0.424168 | 8.3:+55445476 | MS.gene59760:CDS |
| TGGGGCATAGGTTTAATTGT+TGG | 0.442160 | 8.3:+55443617 | MS.gene59760:CDS |
| CACAGCTGTATTATGGGGAA+TGG | 0.442320 | 8.3:+55443107 | MS.gene59760:CDS |
| GCTACTAGTCCTCTGAGGCT+AGG | 0.444293 | 8.3:+55444761 | MS.gene59760:CDS |
| TGAGGATTGTCCTGGTTGTA+AGG | 0.453554 | 8.3:+55441870 | MS.gene59760:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8.3:+55445135 | MS.gene59760:CDS |
| GATTTCAGGTTAGTGCAGCT+TGG | 0.458361 | 8.3:+55443597 | MS.gene59760:intron |
| AATCGTCTGCATCTGGATTC+CGG | 0.461539 | 8.3:+55444149 | MS.gene59760:CDS |
| GTGATGCGGGCCAAGACAAT+AGG | 0.462761 | 8.3:-55444987 | None:intergenic |
| GGAGGTTTAAATGGCGTGCT+TGG | 0.463077 | 8.3:+55443342 | MS.gene59760:CDS |
| AGCAATAACATTCTTAAGGA+TGG | 0.463454 | 8.3:-55445190 | None:intergenic |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8.3:-55445136 | None:intergenic |
| TATAATCAAAAGCTTTGTAA+TGG | 0.470173 | 8.3:-55441926 | None:intergenic |
| CATATGGATATATGAAAAGT+TGG | 0.474064 | 8.3:-55444947 | None:intergenic |
| AAGGGGTAACTTTGCAAAAG+TGG | 0.475663 | 8.3:-55445117 | None:intergenic |
| AAAGCTGTTGGACCTGCTGC+AGG | 0.494052 | 8.3:+55445527 | MS.gene59760:CDS |
| ATTGTCACGAGATTTCTTCT+CGG | 0.495718 | 8.3:+55443321 | MS.gene59760:CDS |
| AAGTGCTGATATTGTAAAGC+AGG | 0.496000 | 8.3:-55444112 | None:intergenic |
| AAAACTGACCCCAGTGATGC+GGG | 0.497700 | 8.3:-55445000 | None:intergenic |
| ATGGATGCTTCTTTCCTACC+AGG | 0.498098 | 8.3:+55445713 | MS.gene59760:CDS |
| ATTATGACATGTACCTTCAC+TGG | 0.505846 | 8.3:-55443366 | None:intergenic |
| ACATTATTCGGCCTTAGTAC+GGG | 0.508387 | 8.3:+55443285 | MS.gene59760:CDS |
| CATTGCTTCTTCTCCAACAA+TGG | 0.513610 | 8.3:-55441844 | None:intergenic |
| GCTGATATTAGTTACTATGC+TGG | 0.515027 | 8.3:+55442962 | MS.gene59760:CDS |
| GTCCACTTACTTATCCCAAA+AGG | 0.516728 | 8.3:-55443973 | None:intergenic |
| GCATATGAGAGAGCCATTGT+TGG | 0.520685 | 8.3:+55441831 | MS.gene59760:CDS |
| ATGATGATTGTTCATAGTTG+AGG | 0.526117 | 8.3:-55445742 | None:intergenic |
| CAAGCAAATGAGCTTAATGA+AGG | 0.526658 | 8.3:+55441898 | MS.gene59760:CDS |
| GTAGGATCTTCATACATGCT+TGG | 0.530305 | 8.3:+55443075 | MS.gene59760:intron |
| GTAACTTTGCAAAAGTGGTA+TGG | 0.530998 | 8.3:-55445112 | None:intergenic |
| AGCTTGTGGACCTATTGTCT+TGG | 0.531880 | 8.3:+55444977 | MS.gene59760:CDS |
| GAAGGGAAAGAGAGATGATG+TGG | 0.533507 | 8.3:-55442223 | None:intergenic |
| TAAAGCAGGGCAAGAAGTAT+GGG | 0.534775 | 8.3:-55444098 | None:intergenic |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8.3:-55445135 | None:intergenic |
| AAGGGAAAGAGAGATGATGT+GGG | 0.544147 | 8.3:-55442222 | None:intergenic |
| TACTAGTCCTCTGAGGCTAG+GGG | 0.546079 | 8.3:+55444763 | MS.gene59760:CDS |
| TTGGTTAACACAGATTAACT+TGG | 0.546815 | 8.3:+55445678 | MS.gene59760:intron |
| GATGCCGAAGCTTTAGAAAA+CGG | 0.551292 | 8.3:+55444509 | MS.gene59760:CDS |
| AATAGGAGGCTATTTGGCTC+AGG | 0.557652 | 8.3:+55443646 | MS.gene59760:CDS |
| CCAAATAGCCTCCTATTGCT+GGG | 0.558164 | 8.3:-55443640 | None:intergenic |
| ATGTCTCTATTCAAAGCTGT+TGG | 0.560681 | 8.3:+55445515 | MS.gene59760:CDS |
| CACATTGTACCACCTGCAGC+AGG | 0.568476 | 8.3:-55445539 | None:intergenic |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8.3:+55445694 | MS.gene59760:CDS |
| TCATGATATTGCTTATCAAG+AGG | 0.578973 | 8.3:+55444625 | MS.gene59760:CDS |
| TTCTGTAACAAACATGGAGG+AGG | 0.580200 | 8.3:+55441807 | None:intergenic |
| ACTCACCATGAAATAAAGGA+AGG | 0.582200 | 8.3:-55442241 | None:intergenic |
| CGGTAGAAAGTCCTATAGCT+TGG | 0.583615 | 8.3:-55443498 | None:intergenic |
| ATTGTTGGCCCAGCAATAGG+AGG | 0.585894 | 8.3:+55443632 | MS.gene59760:CDS |
| GGAGAAGAAGCAATGCTATG+AGG | 0.589066 | 8.3:+55441852 | MS.gene59760:CDS |
| TGGCGTGCTTGGACCAGTGA+AGG | 0.595603 | 8.3:+55443353 | MS.gene59760:CDS |
| GTCACGAGATTTCTTCTCGG+AGG | 0.595988 | 8.3:+55443324 | MS.gene59760:CDS |
| CTCACCATGAAATAAAGGAA+GGG | 0.600349 | 8.3:-55442240 | None:intergenic |
| CAATGCTATGAGGATTGTCC+TGG | 0.610046 | 8.3:+55441862 | MS.gene59760:CDS |
| GAAAACCTGTATTAATAATG+GGG | 0.613201 | 8.3:+55443148 | MS.gene59760:CDS |
| TGTTTCACAGCTGTATTATG+GGG | 0.615339 | 8.3:+55443102 | MS.gene59760:CDS |
| ACTTAGGTGACGATTACGAC+GGG | 0.617248 | 8.3:+55445326 | MS.gene59760:intron |
| AAGTTTACAACTGATGATGT+TGG | 0.618360 | 8.3:+55444791 | MS.gene59760:CDS |
| GCTTGTTCAACCTTACAACC+AGG | 0.623808 | 8.3:-55441880 | None:intergenic |
| TTTCAGGTTAGTGCAGCTTG+GGG | 0.625652 | 8.3:+55443599 | MS.gene59760:intron |
| AGTTGAGGATCAAACCTGGT+AGG | 0.626544 | 8.3:-55445727 | None:intergenic |
| ACTAGTCCTCTGAGGCTAGG+GGG | 0.629834 | 8.3:+55444764 | MS.gene59760:CDS |
| AAACAGGAACAACACCAAAG+AGG | 0.630869 | 8.3:+55445464 | MS.gene59760:intron |
| AGTGCTGATATTGTAAAGCA+GGG | 0.641165 | 8.3:-55444111 | None:intergenic |
| TCATAGTTGAGGATCAAACC+TGG | 0.645802 | 8.3:-55445731 | None:intergenic |
| CCTTGTACAAAATCGAGTCG+TGG | 0.645928 | 8.3:+55445355 | MS.gene59760:CDS |
| GAAAACTGACCCCAGTGATG+CGG | 0.650719 | 8.3:-55445001 | None:intergenic |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8.3:-55445134 | None:intergenic |
| GGAATGGTTTCAGATCGCTA+TGG | 0.663331 | 8.3:+55443123 | MS.gene59760:CDS |
| AATGGTAGCAAAGAGTCCAA+AGG | 0.667533 | 8.3:+55444485 | MS.gene59760:CDS |
| GCTGTTGGACCTGCTGCAGG+TGG | 0.677115 | 8.3:+55445530 | MS.gene59760:CDS |
| GAAACACTTCACAATCACAA+TGG | 0.685991 | 8.3:+55444467 | MS.gene59760:CDS |
| GACTTAGGTGACGATTACGA+CGG | 0.706800 | 8.3:+55445325 | MS.gene59760:intron |
| TATGGGCTACTAGTCCTCTG+AGG | 0.728182 | 8.3:+55444756 | MS.gene59760:CDS |
| TGTCTTGGCCCGCATCACTG+GGG | 0.741366 | 8.3:+55444992 | MS.gene59760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAACTTATATGAATTAA+AGG | - | chr8.3:55444700-55444719 | None:intergenic | 10.0% |
| !! | AAAACTAAAAAATTCAACTA+TGG | + | chr8.3:55444018-55444037 | MS.gene59760:intron | 15.0% |
| !! | AATAAATATGTATCAATGTT+TGG | + | chr8.3:55444853-55444872 | MS.gene59760:intron | 15.0% |
| !! | ACTCTTTGTATTATATTTAA+TGG | + | chr8.3:55445299-55445318 | MS.gene59760:intron | 15.0% |
| !! | AGGTAAATTTCTAATTATTT+AGG | + | chr8.3:55444645-55444664 | MS.gene59760:intron | 15.0% |
| !! | TATTAATATCAAAATTTGTG+AGG | - | chr8.3:55445411-55445430 | None:intergenic | 15.0% |
| !! | TCATTTATTTATTGAAATAC+AGG | - | chr8.3:55442708-55442727 | None:intergenic | 15.0% |
| !!! | AGTTTTTTGGAAATATATTT+GGG | - | chr8.3:55443953-55443972 | None:intergenic | 15.0% |
| !!! | ATAATGCAACATTTATTTTT+AGG | + | chr8.3:55442910-55442929 | MS.gene59760:intron | 15.0% |
| !!! | CTAATTATTTAGGTTAAAAA+TGG | + | chr8.3:55444655-55444674 | MS.gene59760:intron | 15.0% |
| !!! | TTACATTTGTTATTTCTTAA+AGG | + | chr8.3:55442318-55442337 | MS.gene59760:intron | 15.0% |
| !! | AAGTAAAACATGAATAATTG+TGG | - | chr8.3:55443244-55443263 | None:intergenic | 20.0% |
| !! | AATACTAATCACAATGTATA+AGG | - | chr8.3:55445166-55445185 | None:intergenic | 20.0% |
| !! | AGTAAAACATGAATAATTGT+GGG | - | chr8.3:55443243-55443262 | None:intergenic | 20.0% |
| !! | TGAAATATGTTATGTTACTA+TGG | + | chr8.3:55445067-55445086 | MS.gene59760:intron | 20.0% |
| !! | TGATAAAAGACTTAAATGAA+TGG | - | chr8.3:55443017-55443036 | None:intergenic | 20.0% |
| !! | TTATTCATCATTCTTGTATA+TGG | + | chr8.3:55442743-55442762 | MS.gene59760:intron | 20.0% |
| !! | TTGATATTAATAGTTGTTGA+TGG | + | chr8.3:55445419-55445438 | MS.gene59760:intron | 20.0% |
| !!! | CAACATTTATTTTTAGGTAA+GGG | + | chr8.3:55442916-55442935 | MS.gene59760:intron | 20.0% |
| !!! | CAATCAATTAAACTGAATTT+TGG | - | chr8.3:55445251-55445270 | None:intergenic | 20.0% |
| !!! | CGATTAATTTTGACAAAAAT+TGG | + | chr8.3:55442538-55442557 | MS.gene59760:intron | 20.0% |
| !!! | GAGTTTTTTGGAAATATATT+TGG | - | chr8.3:55443954-55443973 | None:intergenic | 20.0% |
| !!! | TACTAACTTGTGAAATTATT+AGG | + | chr8.3:55444906-55444925 | MS.gene59760:intron | 20.0% |
| !!! | TACTTTATTTGAAATGCTTT+TGG | + | chr8.3:55443742-55443761 | MS.gene59760:intron | 20.0% |
| !!! | TATAATCAAAAGCTTTGTAA+TGG | - | chr8.3:55441929-55441948 | None:intergenic | 20.0% |
| !!! | TATTGTTATTTCAATTATGC+AGG | + | chr8.3:55444073-55444092 | MS.gene59760:intron | 20.0% |
| !!! | TTACAAAGCTTTTGATTATA+TGG | + | chr8.3:55441929-55441948 | MS.gene59760:CDS | 20.0% |
| ! | AAGAACAATGATTCTACAAA+TGG | - | chr8.3:55442007-55442026 | None:intergenic | 25.0% |
| ! | ACAAGATATGACAAAACAAA+AGG | - | chr8.3:55442818-55442837 | None:intergenic | 25.0% |
| ! | ATAAACTCACCATGAAATAA+AGG | - | chr8.3:55442248-55442267 | None:intergenic | 25.0% |
| ! | ATAATCCCCATTATTAATAC+AGG | - | chr8.3:55443156-55443175 | None:intergenic | 25.0% |
| ! | ATGAAGATTGAAAATGTTGT+AGG | + | chr8.3:55443057-55443076 | MS.gene59760:intron | 25.0% |
| ! | CACACTTTGAATAATTATGA+TGG | - | chr8.3:55443573-55443592 | None:intergenic | 25.0% |
| ! | CATATGGATATATGAAAAGT+TGG | - | chr8.3:55444950-55444969 | None:intergenic | 25.0% |
| ! | CCTTACATAACTTATTCAAA+AGG | - | chr8.3:55442123-55442142 | None:intergenic | 25.0% |
| ! | CGAAAACCTGTATTAATAAT+GGG | + | chr8.3:55443147-55443166 | MS.gene59760:CDS | 25.0% |
| ! | GAAAACCTGTATTAATAATG+GGG | + | chr8.3:55443148-55443167 | MS.gene59760:CDS | 25.0% |
| ! | GAAACAAGAAATTTACATCA+TGG | - | chr8.3:55442784-55442803 | None:intergenic | 25.0% |
| ! | TATGTGCATGTAAAAATTCA+AGG | - | chr8.3:55443718-55443737 | None:intergenic | 25.0% |
| ! | TCGAAAACCTGTATTAATAA+TGG | + | chr8.3:55443146-55443165 | MS.gene59760:CDS | 25.0% |
| ! | TGTAAGTGAATCTCTTTAAA+TGG | + | chr8.3:55445212-55445231 | MS.gene59760:intron | 25.0% |
| ! | TGTCTGCTTCAATTATTTAT+TGG | - | chr8.3:55444337-55444356 | None:intergenic | 25.0% |
| ! | TTACAGCAATAACATTCTTA+AGG | - | chr8.3:55445197-55445216 | None:intergenic | 25.0% |
| ! | TTGTATATGGTACAAACAAT+TGG | + | chr8.3:55442756-55442775 | MS.gene59760:intron | 25.0% |
| !! | AAAAGAGGTTTTCATTCTTT+TGG | - | chr8.3:55444556-55444575 | None:intergenic | 25.0% |
| !! | ACTTTTCATATATCCATATG+TGG | + | chr8.3:55444950-55444969 | MS.gene59760:CDS | 25.0% |
| !! | ATGAAAACCTCTTTTTGAAT+TGG | + | chr8.3:55444561-55444580 | MS.gene59760:CDS | 25.0% |
| !! | ATTTCCAAAAAACTCCTTTT+GGG | + | chr8.3:55443959-55443978 | MS.gene59760:CDS | 25.0% |
| !! | CCTTTTGAATAAGTTATGTA+AGG | + | chr8.3:55442120-55442139 | MS.gene59760:intron | 25.0% |
| !! | TATTTCCAAAAAACTCCTTT+TGG | + | chr8.3:55443958-55443977 | MS.gene59760:CDS | 25.0% |
| !! | TGTTCTTTTTCTTATGATCT+TGG | + | chr8.3:55445659-55445678 | MS.gene59760:intron | 25.0% |
| !! | TTTTGACAAAAATTGGAGAA+GGG | + | chr8.3:55442545-55442564 | MS.gene59760:intron | 25.0% |
| !!! | AAAGCTTTTGATTATATGGA+TGG | + | chr8.3:55441933-55441952 | MS.gene59760:CDS | 25.0% |
| !!! | AATAGTTGTTGATGGAATTT+TGG | + | chr8.3:55445427-55445446 | MS.gene59760:intron | 25.0% |
| !!! | ATTTTGACAAAAATTGGAGA+AGG | + | chr8.3:55442544-55442563 | MS.gene59760:intron | 25.0% |
| !!! | GCAACATTTATTTTTAGGTA+AGG | + | chr8.3:55442915-55442934 | MS.gene59760:intron | 25.0% |
| !!! | GTCATTTTCAACACATTATT+CGG | + | chr8.3:55443273-55443292 | MS.gene59760:CDS | 25.0% |
| !!! | TATATTTAATGGACTGACTT+AGG | + | chr8.3:55445310-55445329 | MS.gene59760:intron | 25.0% |
| !!! | TCTTTAGGTTTTCTCATTAT+GGG | + | chr8.3:55444739-55444758 | MS.gene59760:intron | 25.0% |
| !!! | TTCTTTAGGTTTTCTCATTA+TGG | + | chr8.3:55444738-55444757 | MS.gene59760:intron | 25.0% |
| !!! | TTTCTTAATTTGTTGTGTCA+CGG | + | chr8.3:55442091-55442110 | MS.gene59760:intron | 25.0% |
| AAACTGATAGAAACACAAGA+TGG | - | chr8.3:55444047-55444066 | None:intergenic | 30.0% | |
| AGAAGAATTGTTGAGACTTA+CGG | - | chr8.3:55443521-55443540 | None:intergenic | 30.0% | |
| AGCAATAACATTCTTAAGGA+TGG | - | chr8.3:55445193-55445212 | None:intergenic | 30.0% | |
| AGTTAGATAGAGAAGAACAA+AGG | - | chr8.3:55442176-55442195 | None:intergenic | 30.0% | |
| ATAGCTATTAAACTATCCAC+AGG | + | chr8.3:55444445-55444464 | MS.gene59760:intron | 30.0% | |
| ATATTTGGGTATTTGTCTAC+TGG | - | chr8.3:55443939-55443958 | None:intergenic | 30.0% | |
| ATGATGATTGTTCATAGTTG+AGG | - | chr8.3:55445745-55445764 | None:intergenic | 30.0% | |
| ATGTTTCACAGCTGTATTAT+GGG | + | chr8.3:55443101-55443120 | MS.gene59760:CDS | 30.0% | |
| CTCAATTGATTGCAAATTTC+AGG | - | chr8.3:55443787-55443806 | None:intergenic | 30.0% | |
| GCAATGATAGATGACATTAA+AGG | - | chr8.3:55444587-55444606 | None:intergenic | 30.0% | |
| TCAAAGTGTGATATGATTTC+AGG | + | chr8.3:55443583-55443602 | MS.gene59760:intron | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8.3:55444625-55444644 | MS.gene59760:CDS | 30.0% | |
| TTAAAGGCCAATTCAAAAAG+AGG | - | chr8.3:55444571-55444590 | None:intergenic | 30.0% | |
| TTGAAATACAGGAAATGACT+AGG | - | chr8.3:55442697-55442716 | None:intergenic | 30.0% | |
| TTGGTTAACACAGATTAACT+TGG | + | chr8.3:55445678-55445697 | MS.gene59760:intron | 30.0% | |
| ! | AAGTTTACAACTGATGATGT+TGG | + | chr8.3:55444791-55444810 | MS.gene59760:CDS | 30.0% |
| ! | AGTTACTATGCTGGTTATAT+TGG | + | chr8.3:55442971-55442990 | MS.gene59760:CDS | 30.0% |
| ! | ATAATATCTAAGACGCATAC+CGG | - | chr8.3:55444171-55444190 | None:intergenic | 30.0% |
| ! | ATGCTTTTGGTATATTGAGA+AGG | + | chr8.3:55443755-55443774 | MS.gene59760:intron | 30.0% |
| ! | GAAATCATTTTGTATCAGCA+TGG | - | chr8.3:55444379-55444398 | None:intergenic | 30.0% |
| ! | TGTGTTCTAAGTTCTTAGTA+CGG | + | chr8.3:55442054-55442073 | MS.gene59760:intron | 30.0% |
| !! | CTATTCATGTTGCTTTCTTT+AGG | + | chr8.3:55444724-55444743 | MS.gene59760:intron | 30.0% |
| !! | GGAATTTTGGCATATTGATT+TGG | + | chr8.3:55445440-55445459 | MS.gene59760:intron | 30.0% |
| !! | TTCTTAATTTGTTGTGTCAC+GGG | + | chr8.3:55442092-55442111 | MS.gene59760:intron | 30.0% |
| !!! | TGCAAATTTTTTATCCTGTG+TGG | - | chr8.3:55443812-55443831 | None:intergenic | 30.0% |
| !!! | TTATCCCAAAAGGAGTTTTT+TGG | - | chr8.3:55443966-55443985 | None:intergenic | 30.0% |
| ACTCACCATGAAATAAAGGA+AGG | - | chr8.3:55442244-55442263 | None:intergenic | 35.0% | |
| ACTTGAGATTTCCTTACAAG+TGG | + | chr8.3:55443850-55443869 | MS.gene59760:intron | 35.0% | |
| ATGTCTCTATTCAAAGCTGT+TGG | + | chr8.3:55445515-55445534 | MS.gene59760:CDS | 35.0% | |
| ATTATGACATGTACCTTCAC+TGG | - | chr8.3:55443369-55443388 | None:intergenic | 35.0% | |
| ATTGTCACGAGATTTCTTCT+CGG | + | chr8.3:55443321-55443340 | MS.gene59760:CDS | 35.0% | |
| CAAGCAAATGAGCTTAATGA+AGG | + | chr8.3:55441898-55441917 | MS.gene59760:CDS | 35.0% | |
| CAGTGTAGTAATCTTGTGAA+AGG | - | chr8.3:55442292-55442311 | None:intergenic | 35.0% | |
| CATGGTGAGTTTATTTATCC+AGG | + | chr8.3:55442254-55442273 | MS.gene59760:intron | 35.0% | |
| CTCACCATGAAATAAAGGAA+GGG | - | chr8.3:55442243-55442262 | None:intergenic | 35.0% | |
| GAAACACTTCACAATCACAA+TGG | + | chr8.3:55444467-55444486 | MS.gene59760:CDS | 35.0% | |
| GATGTTTCACAGCTGTATTA+TGG | + | chr8.3:55443100-55443119 | MS.gene59760:CDS | 35.0% | |
| GCTGATATTAGTTACTATGC+TGG | + | chr8.3:55442962-55442981 | MS.gene59760:CDS | 35.0% | |
| GGTGATGTTCTTTCAATTTC+AGG | + | chr8.3:55444812-55444831 | MS.gene59760:CDS | 35.0% | |
| GTAACTTTGCAAAAGTGGTA+TGG | - | chr8.3:55445115-55445134 | None:intergenic | 35.0% | |
| TCGAAAAAGTTCAGTAGCAT+AGG | - | chr8.3:55443470-55443489 | None:intergenic | 35.0% | |
| TGTTTCACAGCTGTATTATG+GGG | + | chr8.3:55443102-55443121 | MS.gene59760:CDS | 35.0% | |
| TTTCTTCTCGGAGGTTTAAA+TGG | + | chr8.3:55443333-55443352 | MS.gene59760:CDS | 35.0% | |
| ! | ACTTGCTAATTGCTTCTCTA+TGG | + | chr8.3:55442493-55442512 | MS.gene59760:intron | 35.0% |
| ! | AGAGAAGAACAAAGGTACAT+AGG | - | chr8.3:55442168-55442187 | None:intergenic | 35.0% |
| ! | CTTTCCCTTCCTTTATTTCA+TGG | + | chr8.3:55442236-55442255 | MS.gene59760:CDS | 35.0% |
| ! | GAAAGGTATAGAATAAGTCC+TGG | - | chr8.3:55442275-55442294 | None:intergenic | 35.0% |
| ! | GTTTCTGTCTTCATGTTTTG+TGG | + | chr8.3:55444233-55444252 | MS.gene59760:intron | 35.0% |
| ! | TCTGCACATCAGTTTTTGAA+AGG | + | chr8.3:55442470-55442489 | MS.gene59760:intron | 35.0% |
| !! | AAGTGCTGATATTGTAAAGC+AGG | - | chr8.3:55444115-55444134 | None:intergenic | 35.0% |
| !! | AGTGCTGATATTGTAAAGCA+GGG | - | chr8.3:55444114-55444133 | None:intergenic | 35.0% |
| !! | GCTTTTGATTATATGGATGG+TGG | + | chr8.3:55441936-55441955 | MS.gene59760:CDS | 35.0% |
| !! | GGCATATTGATTTGGAAAAC+AGG | + | chr8.3:55445448-55445467 | MS.gene59760:intron | 35.0% |
| !! | TCTTAATTTGTTGTGTCACG+GGG | + | chr8.3:55442093-55442112 | MS.gene59760:intron | 35.0% |
| AAACAGGAACAACACCAAAG+AGG | + | chr8.3:55445464-55445483 | MS.gene59760:intron | 40.0% | |
| AAGGGAAAGAGAGATGATGT+GGG | - | chr8.3:55442225-55442244 | None:intergenic | 40.0% | |
| AAGGGGTAACTTTGCAAAAG+TGG | - | chr8.3:55445120-55445139 | None:intergenic | 40.0% | |
| AATGGTAGCAAAGAGTCCAA+AGG | + | chr8.3:55444485-55444504 | MS.gene59760:CDS | 40.0% | |
| ACATTATTCGGCCTTAGTAC+GGG | + | chr8.3:55443285-55443304 | MS.gene59760:CDS | 40.0% | |
| CAATCAATTGAGAACCACAC+AGG | + | chr8.3:55443795-55443814 | MS.gene59760:intron | 40.0% | |
| CACATTATTCGGCCTTAGTA+CGG | + | chr8.3:55443284-55443303 | MS.gene59760:CDS | 40.0% | |
| CATTGCTTCTTCTCCAACAA+TGG | - | chr8.3:55441847-55441866 | None:intergenic | 40.0% | |
| CCATATGTGGAAAAAGCTTG+TGG | + | chr8.3:55444963-55444982 | MS.gene59760:CDS | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8.3:55445138-55445157 | None:intergenic | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | - | chr8.3:55445137-55445156 | None:intergenic | 40.0% | |
| CTTCGTCTCTTGAGATTACA+TGG | + | chr8.3:55442631-55442650 | MS.gene59760:intron | 40.0% | |
| GACGAACTTCGTCATTTAAC+AGG | + | chr8.3:55443444-55443463 | MS.gene59760:intron | 40.0% | |
| GTAGGATCTTCATACATGCT+TGG | + | chr8.3:55443075-55443094 | MS.gene59760:intron | 40.0% | |
| GTCCACTTACTTATCCCAAA+AGG | - | chr8.3:55443976-55443995 | None:intergenic | 40.0% | |
| TCATAGTTGAGGATCAAACC+TGG | - | chr8.3:55445734-55445753 | None:intergenic | 40.0% | |
| TGGGGCATAGGTTTAATTGT+TGG | + | chr8.3:55443617-55443636 | MS.gene59760:CDS | 40.0% | |
| TTAATTGTTGGCCCAGCAAT+AGG | + | chr8.3:55443629-55443648 | MS.gene59760:CDS | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | + | chr8.3:55445694-55445713 | MS.gene59760:CDS | 40.0% |
| ! | GAACAAAGGTACATAGGACA+TGG | - | chr8.3:55442162-55442181 | None:intergenic | 40.0% |
| ! | TAAAGCAGGGCAAGAAGTAT+GGG | - | chr8.3:55444101-55444120 | None:intergenic | 40.0% |
| ! | TGATTGTGAAGTGTTTCCTG+TGG | - | chr8.3:55444464-55444483 | None:intergenic | 40.0% |
| !! | ATGAATGTGTGCCACTTGTA+AGG | - | chr8.3:55443864-55443883 | None:intergenic | 40.0% |
| !! | ATTTCAGGTTAGTGCAGCTT+GGG | + | chr8.3:55443598-55443617 | MS.gene59760:intron | 40.0% |
| !! | CCACAAGCTTTTTCCACATA+TGG | - | chr8.3:55444966-55444985 | None:intergenic | 40.0% |
| !! | GATGCCGAAGCTTTAGAAAA+CGG | + | chr8.3:55444509-55444528 | MS.gene59760:CDS | 40.0% |
| !!! | CTCCTTTTGGGATAAGTAAG+TGG | + | chr8.3:55443971-55443990 | MS.gene59760:intron | 40.0% |
| !!! | GCTTCCGTTTTCTAAAGCTT+CGG | - | chr8.3:55444516-55444535 | None:intergenic | 40.0% |
| AATCGTCTGCATCTGGATTC+CGG | + | chr8.3:55444149-55444168 | MS.gene59760:CDS | 45.0% | |
| ACTTAGGTGACGATTACGAC+GGG | + | chr8.3:55445326-55445345 | MS.gene59760:intron | 45.0% | |
| AGCTTGTGGACCTATTGTCT+TGG | + | chr8.3:55444977-55444996 | MS.gene59760:CDS | 45.0% | |
| AGTTGAGGATCAAACCTGGT+AGG | - | chr8.3:55445730-55445749 | None:intergenic | 45.0% | |
| ATCGATCCATGATGCATCAG+TGG | - | chr8.3:55442668-55442687 | None:intergenic | 45.0% | |
| ATGGATGCTTCTTTCCTACC+AGG | + | chr8.3:55445713-55445732 | MS.gene59760:CDS | 45.0% | |
| CAATGCTATGAGGATTGTCC+TGG | + | chr8.3:55441862-55441881 | MS.gene59760:CDS | 45.0% | |
| CACAGCTGTATTATGGGGAA+TGG | + | chr8.3:55443107-55443126 | MS.gene59760:CDS | 45.0% | |
| CCAAATAGCCTCCTATTGCT+GGG | - | chr8.3:55443643-55443662 | None:intergenic | 45.0% | |
| CCATCCAAAAACCCGTACTA+AGG | - | chr8.3:55443299-55443318 | None:intergenic | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8.3:55445135-55445154 | MS.gene59760:CDS | 45.0% | |
| CCTTGTACAAAATCGAGTCG+TGG | + | chr8.3:55445355-55445374 | MS.gene59760:CDS | 45.0% | |
| CGGTAGAAAGTCCTATAGCT+TGG | - | chr8.3:55443501-55443520 | None:intergenic | 45.0% | |
| GAAGGGAAAGAGAGATGATG+TGG | - | chr8.3:55442226-55442245 | None:intergenic | 45.0% | |
| GACTTAGGTGACGATTACGA+CGG | + | chr8.3:55445325-55445344 | MS.gene59760:intron | 45.0% | |
| GCATATGAGAGAGCCATTGT+TGG | + | chr8.3:55441831-55441850 | MS.gene59760:CDS | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8.3:55445139-55445158 | None:intergenic | 45.0% | |
| GCTTGTTCAACCTTACAACC+AGG | - | chr8.3:55441883-55441902 | None:intergenic | 45.0% | |
| GGAATGGTTTCAGATCGCTA+TGG | + | chr8.3:55443123-55443142 | MS.gene59760:CDS | 45.0% | |
| GGAGAAGAAGCAATGCTATG+AGG | + | chr8.3:55441852-55441871 | MS.gene59760:CDS | 45.0% | |
| GTAAAGCAGGGCAAGAAGTA+TGG | - | chr8.3:55444102-55444121 | None:intergenic | 45.0% | |
| GTCTTACCACTGATGCATCA+TGG | + | chr8.3:55442659-55442678 | MS.gene59760:intron | 45.0% | |
| TGAGGATTGTCCTGGTTGTA+AGG | + | chr8.3:55441870-55441889 | MS.gene59760:CDS | 45.0% | |
| TTCCATTAGCTGCTCCTCTT+TGG | - | chr8.3:55445481-55445500 | None:intergenic | 45.0% | |
| ! | AATAGGAGGCTATTTGGCTC+AGG | + | chr8.3:55443646-55443665 | MS.gene59760:CDS | 45.0% |
| ! | CCACGACTCGATTTTGTACA+AGG | - | chr8.3:55445358-55445377 | None:intergenic | 45.0% |
| !! | CCTTAGTACGGGTTTTTGGA+TGG | + | chr8.3:55443296-55443315 | MS.gene59760:CDS | 45.0% |
| !! | GATTTCAGGTTAGTGCAGCT+TGG | + | chr8.3:55443597-55443616 | MS.gene59760:intron | 45.0% |
| !! | TTTCAGGTTAGTGCAGCTTG+GGG | + | chr8.3:55443599-55443618 | MS.gene59760:intron | 45.0% |
| !! | AAAATTATTATTAAATAAAG+TGG | + | chr8.3:55442570-55442589 | MS.gene59760:intron | 5.0% |
| AAAACTGACCCCAGTGATGC+GGG | - | chr8.3:55445003-55445022 | None:intergenic | 50.0% | |
| ATTGTTGGCCCAGCAATAGG+AGG | + | chr8.3:55443632-55443651 | MS.gene59760:CDS | 50.0% | |
| CACCAAAGAGGAGCAGCTAA+TGG | + | chr8.3:55445476-55445495 | MS.gene59760:CDS | 50.0% | |
| CAGTAGCAATCGTCTGCATC+TGG | + | chr8.3:55444142-55444161 | MS.gene59760:CDS | 50.0% | |
| CCCAGCAATAGGAGGCTATT+TGG | + | chr8.3:55443640-55443659 | MS.gene59760:CDS | 50.0% | |
| GAAAACTGACCCCAGTGATG+CGG | - | chr8.3:55445004-55445023 | None:intergenic | 50.0% | |
| GCCAAATAGCCTCCTATTGC+TGG | - | chr8.3:55443644-55443663 | None:intergenic | 50.0% | |
| GGAGGTTTAAATGGCGTGCT+TGG | + | chr8.3:55443342-55443361 | MS.gene59760:CDS | 50.0% | |
| GTCACGAGATTTCTTCTCGG+AGG | + | chr8.3:55443324-55443343 | MS.gene59760:CDS | 50.0% | |
| TAAAGCTTCGGCATCGCCTT+TGG | - | chr8.3:55444504-55444523 | None:intergenic | 50.0% | |
| ! | TATGGGCTACTAGTCCTCTG+AGG | + | chr8.3:55444756-55444775 | MS.gene59760:CDS | 50.0% |
| ! | TCGGCCTTAGTACGGGTTTT+TGG | + | chr8.3:55443292-55443311 | MS.gene59760:CDS | 50.0% |
| !! | CGAGAAGAGCACCAAGCTAT+AGG | + | chr8.3:55443487-55443506 | MS.gene59760:CDS | 50.0% |
| !! | CTACTAGTCCTCTGAGGCTA+GGG | + | chr8.3:55444762-55444781 | MS.gene59760:CDS | 50.0% |
| !! | TACTAGTCCTCTGAGGCTAG+GGG | + | chr8.3:55444763-55444782 | MS.gene59760:CDS | 50.0% |
| AAAGCTGTTGGACCTGCTGC+AGG | + | chr8.3:55445527-55445546 | MS.gene59760:CDS | 55.0% | |
| ATTGTCTTGGCCCGCATCAC+TGG | + | chr8.3:55444990-55445009 | MS.gene59760:CDS | 55.0% | |
| CACATTGTACCACCTGCAGC+AGG | - | chr8.3:55445542-55445561 | None:intergenic | 55.0% | |
| GTGATGCGGGCCAAGACAAT+AGG | - | chr8.3:55444990-55445009 | None:intergenic | 55.0% | |
| GTTAGTGCAGCTTGGGGCAT+AGG | + | chr8.3:55443605-55443624 | MS.gene59760:CDS | 55.0% | |
| TTCAAACCCCCTAGCCTCAG+AGG | - | chr8.3:55444773-55444792 | None:intergenic | 55.0% | |
| TTGTCTTGGCCCGCATCACT+GGG | + | chr8.3:55444991-55445010 | MS.gene59760:CDS | 55.0% | |
| !! | ACTAGTCCTCTGAGGCTAGG+GGG | + | chr8.3:55444764-55444783 | MS.gene59760:CDS | 55.0% |
| !! | GCTACTAGTCCTCTGAGGCT+AGG | + | chr8.3:55444761-55444780 | MS.gene59760:CDS | 55.0% |
| TGGCGTGCTTGGACCAGTGA+AGG | + | chr8.3:55443353-55443372 | MS.gene59760:CDS | 60.0% | |
| TGTCTTGGCCCGCATCACTG+GGG | + | chr8.3:55444992-55445011 | MS.gene59760:CDS | 60.0% | |
| GCTGTTGGACCTGCTGCAGG+TGG | + | chr8.3:55445530-55445549 | MS.gene59760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 55441820 | 55445772 | 55441820 | ID=MS.gene59760 |
| chr8.3 | mRNA | 55441820 | 55445772 | 55441820 | ID=MS.gene59760.t1;Parent=MS.gene59760 |
| chr8.3 | exon | 55441820 | 55441970 | 55441820 | ID=MS.gene59760.t1.exon1;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55441820 | 55441970 | 55441820 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55442217 | 55442257 | 55442217 | ID=MS.gene59760.t1.exon2;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55442217 | 55442257 | 55442217 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55442932 | 55442992 | 55442932 | ID=MS.gene59760.t1.exon3;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55442932 | 55442992 | 55442932 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55443079 | 55443181 | 55443079 | ID=MS.gene59760.t1.exon4;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55443079 | 55443181 | 55443079 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55443272 | 55443374 | 55443272 | ID=MS.gene59760.t1.exon5;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55443272 | 55443374 | 55443272 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55443466 | 55443519 | 55443466 | ID=MS.gene59760.t1.exon6;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55443466 | 55443519 | 55443466 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55443605 | 55443667 | 55443605 | ID=MS.gene59760.t1.exon7;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55443605 | 55443667 | 55443605 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55443936 | 55443985 | 55443936 | ID=MS.gene59760.t1.exon8;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55443936 | 55443985 | 55443936 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55444095 | 55444170 | 55444095 | ID=MS.gene59760.t1.exon9;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55444095 | 55444170 | 55444095 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55444467 | 55444646 | 55444467 | ID=MS.gene59760.t1.exon10;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55444467 | 55444646 | 55444467 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55444746 | 55444833 | 55444746 | ID=MS.gene59760.t1.exon11;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55444746 | 55444833 | 55444746 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55444928 | 55445013 | 55444928 | ID=MS.gene59760.t1.exon12;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55444928 | 55445013 | 55444928 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55445105 | 55445212 | 55445105 | ID=MS.gene59760.t1.exon13;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55445105 | 55445212 | 55445105 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55445332 | 55445376 | 55445332 | ID=MS.gene59760.t1.exon14;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55445332 | 55445376 | 55445332 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55445470 | 55445558 | 55445470 | ID=MS.gene59760.t1.exon15;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55445470 | 55445558 | 55445470 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| chr8.3 | exon | 55445691 | 55445772 | 55445691 | ID=MS.gene59760.t1.exon16;Parent=MS.gene59760.t1 |
| chr8.3 | CDS | 55445691 | 55445772 | 55445691 | ID=cds.MS.gene59760.t1;Parent=MS.gene59760.t1 |
| Gene Sequence |
| Protein sequence |
