Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78669.t1 | RHN40448.1 | 96.7 | 451 | 14 | 1 | 1 | 451 | 1 | 450 | 6.90E-247 | 862.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78669.t1 | Q8RWN2 | 54.6 | 460 | 199 | 1 | 2 | 451 | 4 | 463 | 1.1e-147 | 524.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78669.t1 | A0A396GJA3 | 96.7 | 451 | 14 | 1 | 1 | 451 | 1 | 450 | 5.0e-247 | 862.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78669 | MS.gene75533 | PPI |
| MS.gene016424 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene016422 | PPI |
| MS.gene78669 | MS.gene78668 | PPI |
| MS.gene56347 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene064910 | PPI |
| MS.gene51712 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene51995 | PPI |
| MS.gene59757 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene016425 | PPI |
| MS.gene78669 | MS.gene75531 | PPI |
| MS.gene067076 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene038683 | PPI |
| MS.gene063903 | MS.gene78669 | PPI |
| MS.gene016423 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene063905 | PPI |
| MS.gene78669 | MS.gene78667 | PPI |
| MS.gene063904 | MS.gene78669 | PPI |
| MS.gene78670 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene045176 | PPI |
| MS.gene59759 | MS.gene78669 | PPI |
| MS.gene51711 | MS.gene78669 | PPI |
| MS.gene56348 | MS.gene78669 | PPI |
| MS.gene064455 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene009215 | PPI |
| MS.gene78669 | MS.gene045173 | PPI |
| MS.gene063906 | MS.gene78669 | PPI |
| MS.gene51992 | MS.gene78669 | PPI |
| MS.gene78669 | MS.gene79081 | PPI |
| MS.gene78669 | MS.gene59760 | PPI |
| MS.gene78669 | MS.gene56347 | PPI |
| MS.gene59758 | MS.gene78669 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78669.t1 | MTR_8g042780 | 96.452 | 451 | 15 | 1 | 1 | 451 | 1 | 450 | 0.0 | 889 |
| MS.gene78669.t1 | MTR_8g042780 | 97.216 | 431 | 11 | 1 | 1 | 431 | 1 | 430 | 0.0 | 854 |
| MS.gene78669.t1 | MTR_8g042870 | 88.106 | 454 | 51 | 1 | 1 | 451 | 1 | 454 | 0.0 | 811 |
| MS.gene78669.t1 | MTR_8g042770 | 81.596 | 451 | 80 | 1 | 4 | 451 | 7 | 457 | 0.0 | 776 |
| MS.gene78669.t1 | MTR_3g010820 | 71.205 | 448 | 125 | 1 | 8 | 451 | 10 | 457 | 0.0 | 680 |
| MS.gene78669.t1 | MTR_8g062990 | 69.866 | 448 | 131 | 1 | 8 | 451 | 10 | 457 | 0.0 | 673 |
| MS.gene78669.t1 | MTR_3g086440 | 70.917 | 447 | 126 | 2 | 4 | 447 | 7 | 452 | 0.0 | 646 |
| MS.gene78669.t1 | MTR_3g010850 | 66.222 | 450 | 146 | 2 | 5 | 451 | 6 | 452 | 0.0 | 610 |
| MS.gene78669.t1 | MTR_3g010850 | 68.227 | 406 | 123 | 2 | 49 | 451 | 38 | 440 | 0.0 | 563 |
| MS.gene78669.t1 | MTR_8g042820 | 91.071 | 280 | 25 | 0 | 151 | 430 | 34 | 313 | 0.0 | 529 |
| MS.gene78669.t1 | MTR_1194s0010 | 96.667 | 150 | 4 | 1 | 1 | 150 | 1 | 149 | 1.67e-99 | 294 |
| MS.gene78669.t1 | MTR_1157s0010 | 87.692 | 130 | 16 | 0 | 322 | 451 | 1 | 130 | 6.74e-76 | 234 |
| MS.gene78669.t1 | MTR_8g075280 | 32.487 | 197 | 99 | 7 | 32 | 227 | 99 | 262 | 3.33e-13 | 70.5 |
| MS.gene78669.t1 | MTR_8g075280 | 43.137 | 102 | 41 | 3 | 32 | 132 | 99 | 184 | 3.45e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78669.t1 | AT5G13750 | 56.733 | 453 | 193 | 2 | 2 | 451 | 3 | 455 | 0.0 | 544 |
| MS.gene78669.t1 | AT5G13740 | 54.565 | 460 | 199 | 1 | 2 | 451 | 4 | 463 | 0.0 | 536 |
| MS.gene78669.t1 | AT3G43790 | 53.509 | 456 | 202 | 3 | 2 | 451 | 5 | 456 | 0.0 | 518 |
| MS.gene78669.t1 | AT3G43790 | 53.509 | 456 | 202 | 3 | 2 | 451 | 5 | 456 | 0.0 | 518 |
| MS.gene78669.t1 | AT3G43790 | 53.659 | 451 | 199 | 3 | 2 | 446 | 5 | 451 | 0.0 | 514 |
| MS.gene78669.t1 | AT3G43790 | 53.659 | 451 | 199 | 3 | 2 | 446 | 5 | 451 | 0.0 | 514 |
| MS.gene78669.t1 | AT5G13740 | 54.670 | 439 | 189 | 1 | 2 | 430 | 4 | 442 | 5.08e-179 | 508 |
| MS.gene78669.t1 | AT5G13750 | 54.768 | 409 | 182 | 2 | 2 | 407 | 3 | 411 | 1.18e-166 | 475 |
| MS.gene78669.t1 | AT5G13750 | 54.768 | 409 | 182 | 2 | 2 | 407 | 3 | 411 | 1.18e-166 | 475 |
| MS.gene78669.t1 | AT3G43790 | 52.593 | 405 | 182 | 3 | 2 | 400 | 5 | 405 | 6.67e-156 | 448 |
| MS.gene78669.t1 | AT5G13750 | 57.453 | 369 | 154 | 2 | 86 | 451 | 1 | 369 | 1.77e-155 | 446 |
| MS.gene78669.t1 | AT5G13940 | 42.857 | 77 | 28 | 1 | 266 | 342 | 8 | 68 | 2.19e-13 | 72.8 |
| MS.gene78669.t1 | AT5G13940 | 42.857 | 77 | 28 | 1 | 266 | 342 | 159 | 219 | 3.33e-13 | 72.4 |
Find 115 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAAATCTTGTGATTATT+TGG | 0.109612 | 8.4:+56785143 | MS.gene78669:CDS |
| GGTAATGTTCTTTCAATTTC+AGG | 0.153174 | 8.4:+56788080 | MS.gene78669:CDS |
| CTTTCCATTCCTTTATTTCA+TGG | 0.190236 | 8.4:+56785379 | MS.gene78669:CDS |
| AATAATCACAAGATTTATTA+TGG | 0.215723 | 8.4:-56785140 | None:intergenic |
| CCCAGCAATAGGAGGCTATT+TGG | 0.240770 | 8.4:+56786786 | MS.gene78669:CDS |
| ATTGGCCTTGGCCGCATCAC+TGG | 0.273414 | 8.4:+56788495 | MS.gene78669:CDS |
| TTTCTTCTCGGAAGTTTAAA+TGG | 0.278868 | 8.4:+56786388 | MS.gene78669:CDS |
| TTGGCCTTAGTACGGGTTAT+TGG | 0.303055 | 8.4:+56786347 | MS.gene78669:CDS |
| GCCAAATAGCCTCCTATTGC+TGG | 0.306470 | 8.4:-56786787 | None:intergenic |
| ATAAAGCAGGGCAAGAAGTA+TGG | 0.308634 | 8.4:-56787294 | None:intergenic |
| GGCCATTAGCTGCCCCTCTT+TGG | 0.317024 | 8.4:-56788978 | None:intergenic |
| CAGTAGTAATTGCCTGCATC+TGG | 0.319817 | 8.4:+56787337 | MS.gene78669:CDS |
| ATGATTCCCATGATTATAAC+AGG | 0.323438 | 8.4:-56786194 | None:intergenic |
| ATTTCAGGTTAGTGCAGCTT+GGG | 0.341137 | 8.4:+56786744 | MS.gene78669:intron |
| GATGCTGAAGCTTTAGAAAA+TGG | 0.341659 | 8.4:+56787777 | MS.gene78669:CDS |
| TATTTCCAAAGGATTCCTTT+TGG | 0.344840 | 8.4:+56787159 | MS.gene78669:CDS |
| TTGGCCTTGGCCGCATCACT+GGG | 0.347829 | 8.4:+56788496 | MS.gene78669:CDS |
| GTGAAAACCTCTTCATGAAT+TGG | 0.356288 | 8.4:+56787829 | MS.gene78669:CDS |
| CGAGAAGAGCACCAAGCTAT+AGG | 0.358397 | 8.4:+56786633 | MS.gene78669:CDS |
| AATACTAATCACTATATATA+AGG | 0.358767 | 8.4:-56788667 | None:intergenic |
| TTATCCCAAAAGGAATCCTT+TGG | 0.364927 | 8.4:-56787164 | None:intergenic |
| GCAATGATAGATGACATTAA+AGG | 0.367674 | 8.4:-56787852 | None:intergenic |
| TTAATTATTGGCCCAGCAAT+AGG | 0.368164 | 8.4:+56786775 | MS.gene78669:CDS |
| CTACTAGTCCTCCAAGGCTA+GGG | 0.375013 | 8.4:+56788030 | MS.gene78669:CDS |
| GATGTTTGACGTCTGTACTA+TGG | 0.381738 | 8.4:+56786141 | MS.gene78669:CDS |
| AATTGCCTGCATCTGGATTC+CGG | 0.388540 | 8.4:+56787344 | MS.gene78669:CDS |
| TGACACGCACATACCTTAAC+TGG | 0.395916 | 8.4:-56786421 | None:intergenic |
| GAATCCTTTGGAAATATTTG+TGG | 0.397936 | 8.4:-56787152 | None:intergenic |
| AACTTGGTCACAAAAGCGTT+TGG | 0.401484 | 8.4:+56789192 | MS.gene78669:CDS |
| ACAAACTCACCATGAAATAA+AGG | 0.406957 | 8.4:-56785388 | None:intergenic |
| CACATTATTTGGCCTTAGTA+CGG | 0.412432 | 8.4:+56786339 | MS.gene78669:CDS |
| TGGGGCGTAGGCTTAATTAT+TGG | 0.413597 | 8.4:+56786763 | MS.gene78669:CDS |
| TCGAAAACCTGTTATAATCA+TGG | 0.414276 | 8.4:+56786187 | MS.gene78669:CDS |
| GATTTCAGGTTAGTGCAGCT+TGG | 0.417980 | 8.4:+56786743 | MS.gene78669:intron |
| TGGCGTGCTTGGACCAGTTA+AGG | 0.430782 | 8.4:+56786408 | MS.gene78669:CDS |
| TTTGGATGCTTCTTTCCTAC+CGG | 0.441952 | 8.4:+56789210 | MS.gene78669:CDS |
| ATGTTTGACGTCTGTACTAT+GGG | 0.442808 | 8.4:+56786142 | MS.gene78669:CDS |
| GGAGAAAGAGCAGCCATTGT+TGG | 0.443664 | 8.4:+56785045 | MS.gene78669:CDS |
| AACAGGAACAACACCAAAGA+GGG | 0.450572 | 8.4:+56788965 | MS.gene78669:intron |
| GCTTGTGGACCTATTGGCCT+TGG | 0.452628 | 8.4:+56788483 | MS.gene78669:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.454765 | 8.4:+56788639 | MS.gene78669:CDS |
| GTGATGCGGCCAAGGCCAAT+AGG | 0.462136 | 8.4:-56788492 | None:intergenic |
| CAGAAGGGTATATGAAAAGT+TGG | 0.463158 | 8.4:-56788452 | None:intergenic |
| GCCTGACAACATTGCTATGA+AGG | 0.464502 | 8.4:-56788640 | None:intergenic |
| CACCAAAGAGGGGCAGCTAA+TGG | 0.468437 | 8.4:+56788976 | MS.gene78669:CDS |
| GGAAGTTTAAATGGCGTGCT+TGG | 0.471237 | 8.4:+56786397 | MS.gene78669:CDS |
| GTTAGTGCAGCTTGGGGCGT+AGG | 0.472475 | 8.4:+56786751 | MS.gene78669:CDS |
| AAGGGGTAACTTTGCAAAAG+TGG | 0.475663 | 8.4:-56788621 | None:intergenic |
| GTAGGGTCTTCGTTCATGCT+TGG | 0.479381 | 8.4:+56786116 | MS.gene78669:intron |
| CCTTAGTACGGGTTATTGGA+TGG | 0.482293 | 8.4:+56786351 | MS.gene78669:CDS |
| CAAGCTAAAGAGCTTAATCA+AGG | 0.482874 | 8.4:+56785112 | MS.gene78669:CDS |
| TTTGTTTATGCAGATTAACT+TGG | 0.483933 | 8.4:+56789176 | MS.gene78669:intron |
| ACTTAGGTGACGATTACAAC+AGG | 0.486434 | 8.4:+56788827 | MS.gene78669:intron |
| CGAAAACCTGTTATAATCAT+GGG | 0.487603 | 8.4:+56786188 | MS.gene78669:CDS |
| TGACCCCAGTGATGCGGCCA+AGG | 0.489416 | 8.4:-56788500 | None:intergenic |
| GACGTCTGTACTATGGGGAA+TGG | 0.493688 | 8.4:+56786148 | MS.gene78669:CDS |
| ACATTATTTGGCCTTAGTAC+GGG | 0.494745 | 8.4:+56786340 | MS.gene78669:CDS |
| GTTCACTTACTTATCCCAAA+AGG | 0.500373 | 8.4:-56787174 | None:intergenic |
| GCTACTAGTCCTCCAAGGCT+AGG | 0.502640 | 8.4:+56788029 | MS.gene78669:CDS |
| AAGTACTGATATTATAAAGC+AGG | 0.506362 | 8.4:-56787307 | None:intergenic |
| GCTAATGGCCTTTCTATGAC+AGG | 0.507368 | 8.4:+56788991 | MS.gene78669:CDS |
| AGTTATTACGCTGGTTATGT+TGG | 0.511780 | 8.4:+56786011 | MS.gene78669:CDS |
| AAAGCCATTGGACCTGCTGC+AGG | 0.513165 | 8.4:+56789027 | MS.gene78669:CDS |
| CCATCCAATAACCCGTACTA+AGG | 0.514024 | 8.4:-56786351 | None:intergenic |
| TTGGATGCTTCTTTCCTACC+GGG | 0.516992 | 8.4:+56789211 | MS.gene78669:CDS |
| TATTGCTTCTTCTCCAACAA+TGG | 0.517433 | 8.4:-56785058 | None:intergenic |
| AAATCTTGTGATTATTTGGA+TGG | 0.521943 | 8.4:+56785147 | MS.gene78669:CDS |
| TACTAGTCCTCCAAGGCTAG+GGG | 0.526949 | 8.4:+56788031 | MS.gene78669:CDS |
| ATTATCACGAGATTTCTTCT+CGG | 0.530298 | 8.4:+56786376 | MS.gene78669:CDS |
| TAAAGCAGGGCAAGAAGTAT+GGG | 0.531610 | 8.4:-56787293 | None:intergenic |
| CCTGACAACATTGCTATGAA+GGG | 0.540798 | 8.4:-56788639 | None:intergenic |
| TTAAAGGCCAATTCATGAAG+AGG | 0.547614 | 8.4:-56787836 | None:intergenic |
| GAGACATCCCTGTCATAGAA+AGG | 0.550127 | 8.4:-56788999 | None:intergenic |
| ATGTCTCTATTCAAAGCCAT+TGG | 0.553081 | 8.4:+56789015 | MS.gene78669:CDS |
| AACTTTACAACTGATGATGT+TGG | 0.553748 | 8.4:+56788059 | MS.gene78669:CDS |
| AATAGGAGGCTATTTGGCTC+AGG | 0.557652 | 8.4:+56786792 | MS.gene78669:CDS |
| CCAAATAGCCTCCTATTGCT+GGG | 0.558164 | 8.4:-56786786 | None:intergenic |
| CAATACTATGAGGATTGTCC+TGG | 0.559637 | 8.4:+56785076 | MS.gene78669:CDS |
| CACATTGTACCACCTGCAGC+AGG | 0.568476 | 8.4:-56789039 | None:intergenic |
| ATATCCACAAATATTTCCAA+AGG | 0.572962 | 8.4:+56787148 | MS.gene78669:CDS |
| TGACTACACTTACCACTACT+CGG | 0.573014 | 8.4:-56788868 | None:intergenic |
| CTCACCATGAAATAAAGGAA+TGG | 0.574296 | 8.4:-56785383 | None:intergenic |
| TCATGATATTGCTTATCAAG+AGG | 0.581145 | 8.4:+56787893 | MS.gene78669:CDS |
| ACATACCGGAATCCAGATGC+AGG | 0.582327 | 8.4:-56787349 | None:intergenic |
| CGGTAGAAAGTCCTATAGCT+TGG | 0.583615 | 8.4:-56786644 | None:intergenic |
| ATTATTGGCCCAGCAATAGG+AGG | 0.584442 | 8.4:+56786778 | MS.gene78669:CDS |
| ACCACCTGCAGCAGGTCCAA+TGG | 0.585081 | 8.4:-56789031 | None:intergenic |
| AGTACTGATATTATAAAGCA+GGG | 0.585621 | 8.4:-56787306 | None:intergenic |
| TCTTGTGATTATTTGGATGG+TGG | 0.587318 | 8.4:+56785150 | MS.gene78669:CDS |
| TTACAGACATAATATTCTTG+AGG | 0.592079 | 8.4:-56788698 | None:intergenic |
| AAACAGGAACAACACCAAAG+AGG | 0.593747 | 8.4:+56788964 | MS.gene78669:intron |
| GGAGAAGAAGCAATACTATG+AGG | 0.594400 | 8.4:+56785066 | MS.gene78669:CDS |
| GCTGATATAAGTTATTACGC+TGG | 0.603862 | 8.4:+56786002 | MS.gene78669:CDS |
| ACATTATAGCTAAGAACATG+TGG | 0.606431 | 8.4:+56789298 | MS.gene78669:intron |
| AATGGAAAGAGAGATGATGC+TGG | 0.606748 | 8.4:-56785365 | None:intergenic |
| AGACATAATATTCTTGAGGA+CGG | 0.607011 | 8.4:-56788694 | None:intergenic |
| CTAATGGCCTTTCTATGACA+GGG | 0.610228 | 8.4:+56788992 | MS.gene78669:CDS |
| TTTCAGGTTAGTGCAGCTTG+GGG | 0.614141 | 8.4:+56786745 | MS.gene78669:intron |
| TAAAGCTTCAGCATCACCAG+TGG | 0.621936 | 8.4:-56787769 | None:intergenic |
| GCCATTGGACCTGCTGCAGG+TGG | 0.627710 | 8.4:+56789030 | MS.gene78669:CDS |
| GCTTGTTCCACTTTACAACC+AGG | 0.628313 | 8.4:-56785094 | None:intergenic |
| GGATTGTCCTGGTTGTAAAG+TGG | 0.628695 | 8.4:+56785087 | MS.gene78669:CDS |
| AACGGCAACAAAGAGTCCAC+TGG | 0.629088 | 8.4:+56787753 | MS.gene78669:CDS |
| CCTAATACAAAACCGAGTAG+TGG | 0.638148 | 8.4:+56788856 | MS.gene78669:CDS |
| AAGCTAAAGAGCTTAATCAA+GGG | 0.642987 | 8.4:+56785113 | MS.gene78669:CDS |
| ACTAGTCCTCCAAGGCTAGG+GGG | 0.651206 | 8.4:+56788032 | MS.gene78669:CDS |
| CTGACAACATTGCTATGAAG+GGG | 0.657130 | 8.4:-56788638 | None:intergenic |
| AATTACTGACCCCAGTGATG+CGG | 0.660257 | 8.4:-56788506 | None:intergenic |
| AGTTGAGCATCATACCCGGT+AGG | 0.662667 | 8.4:-56789225 | None:intergenic |
| GGAATGGTTTCAGATCGCTA+TGG | 0.663331 | 8.4:+56786164 | MS.gene78669:CDS |
| TATGGGCTACTAGTCCTCCA+AGG | 0.665943 | 8.4:+56788024 | MS.gene78669:CDS |
| GAAACACTTCATAATCACAA+CGG | 0.708372 | 8.4:+56787735 | MS.gene78669:CDS |
| TGTTTGACGTCTGTACTATG+GGG | 0.716962 | 8.4:+56786143 | MS.gene78669:CDS |
| ACAGGAACAACACCAAAGAG+GGG | 0.717818 | 8.4:+56788966 | MS.gene78669:intron |
| TGGCCTTGGCCGCATCACTG+GGG | 0.724479 | 8.4:+56788497 | MS.gene78669:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATCTATTATAAAA+TGG | + | chr8.4:56788376-56788395 | MS.gene78669:intron | 10.0% |
| !!! | ATTTCATATAAATTTTGTAT+TGG | - | chr8.4:56786575-56786594 | None:intergenic | 10.0% |
| !!! | ATTTCTAATTGTTAAATTTT+AGG | + | chr8.4:56788411-56788430 | MS.gene78669:intron | 10.0% |
| !! | AATAATCACAAGATTTATTA+TGG | - | chr8.4:56785143-56785162 | None:intergenic | 15.0% |
| !! | AATACTAATCACTATATATA+AGG | - | chr8.4:56788670-56788689 | None:intergenic | 15.0% |
| !! | ATATATTCGTTAATTACTTA+AGG | + | chr8.4:56786498-56786517 | MS.gene78669:intron | 15.0% |
| !! | ATTTATTTGGATATGAAAAA+CGG | - | chr8.4:56786987-56787006 | None:intergenic | 15.0% |
| !! | CAAAAAATGAATATTGAAAT+TGG | + | chr8.4:56786242-56786261 | MS.gene78669:intron | 15.0% |
| !! | CAAAATTGAAATATCATTTA+AGG | - | chr8.4:56787267-56787286 | None:intergenic | 15.0% |
| !! | TAATAAATCTTGTGATTATT+TGG | + | chr8.4:56785143-56785162 | MS.gene78669:CDS | 15.0% |
| !! | TATTCAATTAAAAATTGAAG+TGG | + | chr8.4:56787576-56787595 | MS.gene78669:intron | 15.0% |
| !!! | CAATTTCAATATTCATTTTT+TGG | - | chr8.4:56786244-56786263 | None:intergenic | 15.0% |
| !! | AGGTAAATTTCTAATTATTC+AGG | + | chr8.4:56787913-56787932 | MS.gene78669:intron | 20.0% |
| !! | ATCAATGATAATATTCTTCA+TGG | - | chr8.4:56786064-56786083 | None:intergenic | 20.0% |
| !! | GTACAATATTAATCAGAATT+AGG | - | chr8.4:56786473-56786492 | None:intergenic | 20.0% |
| !! | TAATAACTGTTTATCATTGT+CGG | + | chr8.4:56788120-56788139 | MS.gene78669:intron | 20.0% |
| !! | TGTAAGTTCATTTCTTTAAA+TGG | + | chr8.4:56788716-56788735 | MS.gene78669:intron | 20.0% |
| !!! | AAATGATATTTCAATTTTGC+AGG | + | chr8.4:56787268-56787287 | MS.gene78669:intron | 20.0% |
| !!! | ACTGATTGTATTGTTTTTTA+TGG | + | chr8.4:56788800-56788819 | MS.gene78669:intron | 20.0% |
| !!! | ATAAAATCTAAGATACATAC+CGG | - | chr8.4:56787366-56787385 | None:intergenic | 20.0% |
| !!! | CGATTAGTTAAAATGAATTT+TGG | - | chr8.4:56788752-56788771 | None:intergenic | 20.0% |
| !!! | CTAATTATTCAGGTTAAAAA+TGG | + | chr8.4:56787923-56787942 | MS.gene78669:intron | 20.0% |
| !!! | GAAATATTTCTGTATTTAAC+AGG | + | chr8.4:56786590-56786609 | MS.gene78669:intron | 20.0% |
| !!! | GTTTTTCATATCCAAATAAA+TGG | + | chr8.4:56786986-56787005 | MS.gene78669:intron | 20.0% |
| !!! | TAATTTTTATGTGTTCATTC+AGG | - | chr8.4:56785491-56785510 | None:intergenic | 20.0% |
| ! | AAACTATAGAAACACAAGAT+TGG | - | chr8.4:56787242-56787261 | None:intergenic | 25.0% |
| ! | AAATCTTGTGATTATTTGGA+TGG | + | chr8.4:56785147-56785166 | MS.gene78669:CDS | 25.0% |
| ! | AACTATTACAGTTATGAGTT+AGG | - | chr8.4:56786551-56786570 | None:intergenic | 25.0% |
| ! | AGAATTAGGAACATTAGAAT+AGG | - | chr8.4:56786459-56786478 | None:intergenic | 25.0% |
| ! | ATACTTCTGGTATATTAAGA+AGG | + | chr8.4:56786906-56786925 | MS.gene78669:intron | 25.0% |
| ! | ATATCCACAAATATTTCCAA+AGG | + | chr8.4:56787148-56787167 | MS.gene78669:CDS | 25.0% |
| ! | ATCTAACGAAAACTTATTCA+TGG | - | chr8.4:56785773-56785792 | None:intergenic | 25.0% |
| ! | ATTATGATTGATTGACAAAG+TGG | - | chr8.4:56788201-56788220 | None:intergenic | 25.0% |
| ! | GTATAGAAAAAATCTGCATA+CGG | - | chr8.4:56788602-56788621 | None:intergenic | 25.0% |
| ! | GTTAATGAAATGCAAAATTG+TGG | - | chr8.4:56785719-56785738 | None:intergenic | 25.0% |
| ! | TACACAACTATAATTGACAT+GGG | - | chr8.4:56787703-56787722 | None:intergenic | 25.0% |
| ! | TGAAATATGATCTGTAACTT+TGG | + | chr8.4:56788571-56788590 | MS.gene78669:intron | 25.0% |
| ! | TTACACAACTATAATTGACA+TGG | - | chr8.4:56787704-56787723 | None:intergenic | 25.0% |
| ! | TTACAGACATAATATTCTTG+AGG | - | chr8.4:56788701-56788720 | None:intergenic | 25.0% |
| ! | TTGAATTGTCACAAAAGATT+AGG | - | chr8.4:56785806-56785825 | None:intergenic | 25.0% |
| ! | TTGTATATAGTACAGACAAT+TGG | + | chr8.4:56785866-56785885 | MS.gene78669:intron | 25.0% |
| ! | TTTGTTTATGCAGATTAACT+TGG | + | chr8.4:56789176-56789195 | MS.gene78669:intron | 25.0% |
| !! | AATTTTGCATTTCATTAACC+AGG | + | chr8.4:56785720-56785739 | MS.gene78669:intron | 25.0% |
| !! | ATAAGTAAGTGAACTTTTCT+TGG | + | chr8.4:56787183-56787202 | MS.gene78669:intron | 25.0% |
| !! | ATTTGTGGATATTTTTCTAC+TGG | - | chr8.4:56787140-56787159 | None:intergenic | 25.0% |
| !! | GTAATTGTGACATATTGATT+TGG | + | chr8.4:56788940-56788959 | MS.gene78669:intron | 25.0% |
| !! | TAATCTTTTGTGACAATTCA+AGG | + | chr8.4:56785805-56785824 | MS.gene78669:intron | 25.0% |
| !! | TACCTTATTTGAAATACTTC+TGG | + | chr8.4:56786893-56786912 | MS.gene78669:intron | 25.0% |
| !! | TTCACAAAACCAAATGATTT+TGG | + | chr8.4:56787214-56787233 | MS.gene78669:intron | 25.0% |
| !!! | AAGTACTGATATTATAAAGC+AGG | - | chr8.4:56787310-56787329 | None:intergenic | 25.0% |
| !!! | AGTACTGATATTATAAAGCA+GGG | - | chr8.4:56787309-56787328 | None:intergenic | 25.0% |
| !!! | GTCATTTTCAACACATTATT+TGG | + | chr8.4:56786328-56786347 | MS.gene78669:CDS | 25.0% |
| !!! | TACCAGAAGTATTTCAAATA+AGG | - | chr8.4:56786898-56786917 | None:intergenic | 25.0% |
| !!! | TCTTTAGGTTTTCTCATTAT+GGG | + | chr8.4:56788007-56788026 | MS.gene78669:intron | 25.0% |
| !!! | TGTTTTTTATGGACTTACTT+AGG | + | chr8.4:56788811-56788830 | MS.gene78669:intron | 25.0% |
| !!! | TTCTTTAGGTTTTCTCATTA+TGG | + | chr8.4:56788006-56788025 | MS.gene78669:intron | 25.0% |
| AAAATCTTTAGACTAACGGA+TGG | - | chr8.4:56788178-56788197 | None:intergenic | 30.0% | |
| AAAGTAAGTTACATCAGAGA+AGG | - | chr8.4:56785321-56785340 | None:intergenic | 30.0% | |
| AAGCTAAAGAGCTTAATCAA+GGG | + | chr8.4:56785113-56785132 | MS.gene78669:CDS | 30.0% | |
| AAGTGACTGAAAATGATGTA+GGG | + | chr8.4:56786099-56786118 | MS.gene78669:intron | 30.0% | |
| ACAAACTCACCATGAAATAA+AGG | - | chr8.4:56785391-56785410 | None:intergenic | 30.0% | |
| ACATTATAGCTAAGAACATG+TGG | + | chr8.4:56789298-56789317 | MS.gene78669:intron | 30.0% | |
| AGAAGAATTGTTGAGACTTA+CGG | - | chr8.4:56786667-56786686 | None:intergenic | 30.0% | |
| AGACATAATATTCTTGAGGA+CGG | - | chr8.4:56788697-56788716 | None:intergenic | 30.0% | |
| AGAGAAGACTATATAAACAG+TGG | - | chr8.4:56787676-56787695 | None:intergenic | 30.0% | |
| ATAAAGAGGATACTGAACTT+TGG | + | chr8.4:56787489-56787508 | MS.gene78669:intron | 30.0% | |
| ATCTATACCTGCATATAAAG+AGG | + | chr8.4:56787475-56787494 | MS.gene78669:intron | 30.0% | |
| ATGATTCCCATGATTATAAC+AGG | - | chr8.4:56786197-56786216 | None:intergenic | 30.0% | |
| ATGTAGTTAATTCAGTTGAG+TGG | + | chr8.4:56785589-56785608 | MS.gene78669:intron | 30.0% | |
| ATTATCACGAGATTTCTTCT+CGG | + | chr8.4:56786376-56786395 | MS.gene78669:CDS | 30.0% | |
| CACACTTTGAATAATTACGA+TGG | - | chr8.4:56786719-56786738 | None:intergenic | 30.0% | |
| CATCGTAATTATTCAAAGTG+TGG | + | chr8.4:56786717-56786736 | MS.gene78669:intron | 30.0% | |
| CATGAACATGTACTACTTAT+AGG | - | chr8.4:56787065-56787084 | None:intergenic | 30.0% | |
| CGAAAACCTGTTATAATCAT+GGG | + | chr8.4:56786188-56786207 | MS.gene78669:CDS | 30.0% | |
| CGTTAATTACTTAAGGCTTT+CGG | + | chr8.4:56786505-56786524 | MS.gene78669:intron | 30.0% | |
| GAAACACTTCATAATCACAA+CGG | + | chr8.4:56787735-56787754 | MS.gene78669:CDS | 30.0% | |
| GCAATGATAGATGACATTAA+AGG | - | chr8.4:56787855-56787874 | None:intergenic | 30.0% | |
| GGTAATGTTCTTTCAATTTC+AGG | + | chr8.4:56788080-56788099 | MS.gene78669:CDS | 30.0% | |
| GTCACATATGTAGGAAAAAT+GGG | - | chr8.4:56785546-56785565 | None:intergenic | 30.0% | |
| GTGGAAAATCTTTAGACTAA+CGG | - | chr8.4:56788182-56788201 | None:intergenic | 30.0% | |
| TAATGTGCATGTGAAATTCA+AGG | - | chr8.4:56786869-56786888 | None:intergenic | 30.0% | |
| TACTAAGAACATAGAACAGT+AGG | - | chr8.4:56785269-56785288 | None:intergenic | 30.0% | |
| TCAGTTGACTACAAAATTTC+AGG | - | chr8.4:56786938-56786957 | None:intergenic | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8.4:56787893-56787912 | MS.gene78669:CDS | 30.0% | |
| TCGAAAACCTGTTATAATCA+TGG | + | chr8.4:56786187-56786206 | MS.gene78669:CDS | 30.0% | |
| TGAATTTCACATGCACATTA+AGG | + | chr8.4:56786869-56786888 | MS.gene78669:intron | 30.0% | |
| TGTCACATATGTAGGAAAAA+TGG | - | chr8.4:56785547-56785566 | None:intergenic | 30.0% | |
| TTGTCGGTCATAATAGATAA+TGG | + | chr8.4:56788136-56788155 | MS.gene78669:intron | 30.0% | |
| TTTCTTCTCGGAAGTTTAAA+TGG | + | chr8.4:56786388-56786407 | MS.gene78669:CDS | 30.0% | |
| ! | AACTTTACAACTGATGATGT+TGG | + | chr8.4:56788059-56788078 | MS.gene78669:CDS | 30.0% |
| ! | ATTTCCAAAGGATTCCTTTT+GGG | + | chr8.4:56787160-56787179 | MS.gene78669:CDS | 30.0% |
| ! | CTTTCCATTCCTTTATTTCA+TGG | + | chr8.4:56785379-56785398 | MS.gene78669:CDS | 30.0% |
| ! | GAATCCTTTGGAAATATTTG+TGG | - | chr8.4:56787155-56787174 | None:intergenic | 30.0% |
| ! | TATTTCCAAAGGATTCCTTT+TGG | + | chr8.4:56787159-56787178 | MS.gene78669:CDS | 30.0% |
| !! | GACAATTGGTTCTATAATAC+TGG | + | chr8.4:56785880-56785899 | MS.gene78669:intron | 30.0% |
| !! | GACATATTGATTTGGAAAAC+AGG | + | chr8.4:56788948-56788967 | MS.gene78669:intron | 30.0% |
| !!! | TCAGTCGTTTTTATCTTTTG+CGG | + | chr8.4:56787418-56787437 | MS.gene78669:intron | 30.0% |
| AAAAATTGAAGTGGACAGAC+AGG | + | chr8.4:56787585-56787604 | MS.gene78669:intron | 35.0% | |
| AAATCCCTTACCTGAACATA+AGG | - | chr8.4:56785963-56785982 | None:intergenic | 35.0% | |
| AAATGTGACAACATGAGAGA+AGG | - | chr8.4:56785451-56785470 | None:intergenic | 35.0% | |
| AATCCCTTACCTGAACATAA+GGG | - | chr8.4:56785962-56785981 | None:intergenic | 35.0% | |
| ACATAAGGGTTGCATTATTG+AGG | - | chr8.4:56785948-56785967 | None:intergenic | 35.0% | |
| AGATTGGAGCCAAAATCATT+TGG | - | chr8.4:56787226-56787245 | None:intergenic | 35.0% | |
| ATAATGCAACCCTTATGTTC+AGG | + | chr8.4:56785950-56785969 | MS.gene78669:intron | 35.0% | |
| ATGTCTCTATTCAAAGCCAT+TGG | + | chr8.4:56789015-56789034 | MS.gene78669:CDS | 35.0% | |
| ATGTTTGACGTCTGTACTAT+GGG | + | chr8.4:56786142-56786161 | MS.gene78669:CDS | 35.0% | |
| CAAGCTAAAGAGCTTAATCA+AGG | + | chr8.4:56785112-56785131 | MS.gene78669:CDS | 35.0% | |
| CATGCACAAGACCATTTATT+TGG | - | chr8.4:56787000-56787019 | None:intergenic | 35.0% | |
| CTCACCATGAAATAAAGGAA+TGG | - | chr8.4:56785386-56785405 | None:intergenic | 35.0% | |
| GAAGTGACTGAAAATGATGT+AGG | + | chr8.4:56786098-56786117 | MS.gene78669:intron | 35.0% | |
| GCTGATATAAGTTATTACGC+TGG | + | chr8.4:56786002-56786021 | MS.gene78669:CDS | 35.0% | |
| GGATAAGCTAGAAAAAACAC+AGG | - | chr8.4:56787642-56787661 | None:intergenic | 35.0% | |
| GTGAAAACCTCTTCATGAAT+TGG | + | chr8.4:56787829-56787848 | MS.gene78669:CDS | 35.0% | |
| GTTCACTTACTTATCCCAAA+AGG | - | chr8.4:56787177-56787196 | None:intergenic | 35.0% | |
| TAACCAGATGTCACATATGT+AGG | - | chr8.4:56785555-56785574 | None:intergenic | 35.0% | |
| TAGTCAACTGAGAACTACAA+AGG | + | chr8.4:56786947-56786966 | MS.gene78669:intron | 35.0% | |
| TAGTTGTGTAAACTATCTGC+AGG | + | chr8.4:56787713-56787732 | MS.gene78669:intron | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | - | chr8.4:56785061-56785080 | None:intergenic | 35.0% | |
| TCAAAGTGTGGTATGATTTC+AGG | + | chr8.4:56786729-56786748 | MS.gene78669:intron | 35.0% | |
| TCAGTATCCTCTTTATATGC+AGG | - | chr8.4:56787485-56787504 | None:intergenic | 35.0% | |
| TCTTGTGATTATTTGGATGG+TGG | + | chr8.4:56785150-56785169 | MS.gene78669:CDS | 35.0% | |
| TTAAAGGCCAATTCATGAAG+AGG | - | chr8.4:56787839-56787858 | None:intergenic | 35.0% | |
| TTAATTATTGGCCCAGCAAT+AGG | + | chr8.4:56786775-56786794 | MS.gene78669:CDS | 35.0% | |
| TTATAGTTGAGCATCATACC+CGG | - | chr8.4:56789232-56789251 | None:intergenic | 35.0% | |
| TTATCCCAAAAGGAATCCTT+TGG | - | chr8.4:56787167-56787186 | None:intergenic | 35.0% | |
| TTTCCTACATATGTGACATC+TGG | + | chr8.4:56785549-56785568 | MS.gene78669:intron | 35.0% | |
| ! | AGTTATTACGCTGGTTATGT+TGG | + | chr8.4:56786011-56786030 | MS.gene78669:CDS | 35.0% |
| ! | CAGAAGGGTATATGAAAAGT+TGG | - | chr8.4:56788455-56788474 | None:intergenic | 35.0% |
| ! | TCGAAAAAGTTCAGAAGCAT+AGG | - | chr8.4:56786616-56786635 | None:intergenic | 35.0% |
| ! | TGAAGAGGTTTTCACTCTTT+TGG | - | chr8.4:56787824-56787843 | None:intergenic | 35.0% |
| !! | ACATTATTTGGCCTTAGTAC+GGG | + | chr8.4:56786340-56786359 | MS.gene78669:CDS | 35.0% |
| !! | CACATTATTTGGCCTTAGTA+CGG | + | chr8.4:56786339-56786358 | MS.gene78669:CDS | 35.0% |
| !! | CTACTCATGTTGCTTTCTTT+AGG | + | chr8.4:56787992-56788011 | MS.gene78669:intron | 35.0% |
| !! | GATGCTGAAGCTTTAGAAAA+TGG | + | chr8.4:56787777-56787796 | MS.gene78669:CDS | 35.0% |
| !!! | CACAAGCTTTTTCAACAGAA+GGG | - | chr8.4:56788470-56788489 | None:intergenic | 35.0% |
| AAACAGGAACAACACCAAAG+AGG | + | chr8.4:56788964-56788983 | MS.gene78669:intron | 40.0% | |
| AACAGGAACAACACCAAAGA+GGG | + | chr8.4:56788965-56788984 | MS.gene78669:intron | 40.0% | |
| AAGGGGTAACTTTGCAAAAG+TGG | - | chr8.4:56788624-56788643 | None:intergenic | 40.0% | |
| AATGGAAAGAGAGATGATGC+TGG | - | chr8.4:56785368-56785387 | None:intergenic | 40.0% | |
| ACTTAGGTGACGATTACAAC+AGG | + | chr8.4:56788827-56788846 | MS.gene78669:intron | 40.0% | |
| ATAAAGCAGGGCAAGAAGTA+TGG | - | chr8.4:56787297-56787316 | None:intergenic | 40.0% | |
| CAACCCTTATGTTCAGGTAA+GGG | + | chr8.4:56785956-56785975 | MS.gene78669:intron | 40.0% | |
| CAATACTATGAGGATTGTCC+TGG | + | chr8.4:56785076-56785095 | MS.gene78669:CDS | 40.0% | |
| CCTAATACAAAACCGAGTAG+TGG | + | chr8.4:56788856-56788875 | MS.gene78669:CDS | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8.4:56788642-56788661 | None:intergenic | 40.0% | |
| CCTTCTGTTGAAAAAGCTTG+TGG | + | chr8.4:56788468-56788487 | MS.gene78669:CDS | 40.0% | |
| CTAATGGCCTTTCTATGACA+GGG | + | chr8.4:56788992-56789011 | MS.gene78669:CDS | 40.0% | |
| CTGACAACATTGCTATGAAG+GGG | - | chr8.4:56788641-56788660 | None:intergenic | 40.0% | |
| GAAAAAGCTTGTGGACCTAT+TGG | + | chr8.4:56788477-56788496 | MS.gene78669:CDS | 40.0% | |
| GAGAGAAGGAATCTTGTAGA+AGG | - | chr8.4:56785437-56785456 | None:intergenic | 40.0% | |
| GATGTTTGACGTCTGTACTA+TGG | + | chr8.4:56786141-56786160 | MS.gene78669:CDS | 40.0% | |
| GGAGAAGAAGCAATACTATG+AGG | + | chr8.4:56785066-56785085 | MS.gene78669:CDS | 40.0% | |
| TAAACAGTGGAGACAAAGCA+CGG | - | chr8.4:56787663-56787682 | None:intergenic | 40.0% | |
| TAGAAGGATACAGCTAACTG+TGG | - | chr8.4:56785421-56785440 | None:intergenic | 40.0% | |
| TGACTACACTTACCACTACT+CGG | - | chr8.4:56788871-56788890 | None:intergenic | 40.0% | |
| TGTTTGACGTCTGTACTATG+GGG | + | chr8.4:56786143-56786162 | MS.gene78669:CDS | 40.0% | |
| TTTGGATGCTTCTTTCCTAC+CGG | + | chr8.4:56789210-56789229 | MS.gene78669:CDS | 40.0% | |
| ! | TAAAGCAGGGCAAGAAGTAT+GGG | - | chr8.4:56787296-56787315 | None:intergenic | 40.0% |
| !! | AACTTGGTCACAAAAGCGTT+TGG | + | chr8.4:56789192-56789211 | MS.gene78669:CDS | 40.0% |
| !! | ATTTCAGGTTAGTGCAGCTT+GGG | + | chr8.4:56786744-56786763 | MS.gene78669:intron | 40.0% |
| !! | CCACTACTCGGTTTTGTATT+AGG | - | chr8.4:56788859-56788878 | None:intergenic | 40.0% |
| !!! | CCACAAGCTTTTTCAACAGA+AGG | - | chr8.4:56788471-56788490 | None:intergenic | 40.0% |
| AATTACTGACCCCAGTGATG+CGG | - | chr8.4:56788509-56788528 | None:intergenic | 45.0% | |
| AATTGCCTGCATCTGGATTC+CGG | + | chr8.4:56787344-56787363 | MS.gene78669:CDS | 45.0% | |
| ACAGGAACAACACCAAAGAG+GGG | + | chr8.4:56788966-56788985 | MS.gene78669:intron | 45.0% | |
| AGGATACAGCTAACTGTGGT+AGG | - | chr8.4:56785417-56785436 | None:intergenic | 45.0% | |
| ATTATTGGCCCAGCAATAGG+AGG | + | chr8.4:56786778-56786797 | MS.gene78669:CDS | 45.0% | |
| CAGTAGTAATTGCCTGCATC+TGG | + | chr8.4:56787337-56787356 | MS.gene78669:CDS | 45.0% | |
| CCAAATAGCCTCCTATTGCT+GGG | - | chr8.4:56786789-56786808 | None:intergenic | 45.0% | |
| CCATCCAATAACCCGTACTA+AGG | - | chr8.4:56786354-56786373 | None:intergenic | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8.4:56788639-56788658 | MS.gene78669:CDS | 45.0% | |
| CGGTAGAAAGTCCTATAGCT+TGG | - | chr8.4:56786647-56786666 | None:intergenic | 45.0% | |
| GAGACATCCCTGTCATAGAA+AGG | - | chr8.4:56789002-56789021 | None:intergenic | 45.0% | |
| GCAACCCTTATGTTCAGGTA+AGG | + | chr8.4:56785955-56785974 | MS.gene78669:intron | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8.4:56788643-56788662 | None:intergenic | 45.0% | |
| GCTAATGGCCTTTCTATGAC+AGG | + | chr8.4:56788991-56789010 | MS.gene78669:CDS | 45.0% | |
| GCTTGTTCCACTTTACAACC+AGG | - | chr8.4:56785097-56785116 | None:intergenic | 45.0% | |
| GGAAGTTTAAATGGCGTGCT+TGG | + | chr8.4:56786397-56786416 | MS.gene78669:CDS | 45.0% | |
| GGAATGGTTTCAGATCGCTA+TGG | + | chr8.4:56786164-56786183 | MS.gene78669:CDS | 45.0% | |
| GGATTGTCCTGGTTGTAAAG+TGG | + | chr8.4:56785087-56785106 | MS.gene78669:CDS | 45.0% | |
| TAAAGCTTCAGCATCACCAG+TGG | - | chr8.4:56787772-56787791 | None:intergenic | 45.0% | |
| TCGATTCACGTTCGAAGTTG+TGG | + | chr8.4:56785621-56785640 | MS.gene78669:intron | 45.0% | |
| TGACACGCACATACCTTAAC+TGG | - | chr8.4:56786424-56786443 | None:intergenic | 45.0% | |
| TGGGGCGTAGGCTTAATTAT+TGG | + | chr8.4:56786763-56786782 | MS.gene78669:CDS | 45.0% | |
| TTGGATGCTTCTTTCCTACC+GGG | + | chr8.4:56789211-56789230 | MS.gene78669:CDS | 45.0% | |
| ! | AATAGGAGGCTATTTGGCTC+AGG | + | chr8.4:56786792-56786811 | MS.gene78669:CDS | 45.0% |
| ! | CCTTAGTACGGGTTATTGGA+TGG | + | chr8.4:56786351-56786370 | MS.gene78669:CDS | 45.0% |
| ! | TTTTCTGCAACTGTGACACC+TGG | - | chr8.4:56785741-56785760 | None:intergenic | 45.0% |
| !! | GATTTCAGGTTAGTGCAGCT+TGG | + | chr8.4:56786743-56786762 | MS.gene78669:intron | 45.0% |
| !! | TTGGCCTTAGTACGGGTTAT+TGG | + | chr8.4:56786347-56786366 | MS.gene78669:CDS | 45.0% |
| !! | TTTCAGGTTAGTGCAGCTTG+GGG | + | chr8.4:56786745-56786764 | MS.gene78669:intron | 45.0% |
| AACGGCAACAAAGAGTCCAC+TGG | + | chr8.4:56787753-56787772 | MS.gene78669:CDS | 50.0% | |
| AAGTTCAAACCCCCTAGCCT+TGG | - | chr8.4:56788044-56788063 | None:intergenic | 50.0% | |
| ACATACCGGAATCCAGATGC+AGG | - | chr8.4:56787352-56787371 | None:intergenic | 50.0% | |
| AGTTGAGCATCATACCCGGT+AGG | - | chr8.4:56789228-56789247 | None:intergenic | 50.0% | |
| CCCAGCAATAGGAGGCTATT+TGG | + | chr8.4:56786786-56786805 | MS.gene78669:CDS | 50.0% | |
| CTACTAGTCCTCCAAGGCTA+GGG | + | chr8.4:56788030-56788049 | MS.gene78669:CDS | 50.0% | |
| GACGTCTGTACTATGGGGAA+TGG | + | chr8.4:56786148-56786167 | MS.gene78669:CDS | 50.0% | |
| GCCAAATAGCCTCCTATTGC+TGG | - | chr8.4:56786790-56786809 | None:intergenic | 50.0% | |
| GGAGAAAGAGCAGCCATTGT+TGG | + | chr8.4:56785045-56785064 | MS.gene78669:CDS | 50.0% | |
| GTAGGGTCTTCGTTCATGCT+TGG | + | chr8.4:56786116-56786135 | MS.gene78669:intron | 50.0% | |
| TACTAGTCCTCCAAGGCTAG+GGG | + | chr8.4:56788031-56788050 | MS.gene78669:CDS | 50.0% | |
| ! | TATGGGCTACTAGTCCTCCA+AGG | + | chr8.4:56788024-56788043 | MS.gene78669:CDS | 50.0% |
| !! | CGAGAAGAGCACCAAGCTAT+AGG | + | chr8.4:56786633-56786652 | MS.gene78669:CDS | 50.0% |
| ACTAGTCCTCCAAGGCTAGG+GGG | + | chr8.4:56788032-56788051 | MS.gene78669:CDS | 55.0% | |
| CACCAAAGAGGGGCAGCTAA+TGG | + | chr8.4:56788976-56788995 | MS.gene78669:CDS | 55.0% | |
| GCTACTAGTCCTCCAAGGCT+AGG | + | chr8.4:56788029-56788048 | MS.gene78669:CDS | 55.0% | |
| TGGCGTGCTTGGACCAGTTA+AGG | + | chr8.4:56786408-56786427 | MS.gene78669:CDS | 55.0% | |
| ! | GCTTGTGGACCTATTGGCCT+TGG | + | chr8.4:56788483-56788502 | MS.gene78669:CDS | 55.0% |
| !! | TTCAAACCCCCTAGCCTTGG+AGG | - | chr8.4:56788041-56788060 | None:intergenic | 55.0% |
| GGCCATTAGCTGCCCCTCTT+TGG | - | chr8.4:56788981-56789000 | None:intergenic | 60.0% | |
| GTGATGCGGCCAAGGCCAAT+AGG | - | chr8.4:56788495-56788514 | None:intergenic | 60.0% | |
| GTTAGTGCAGCTTGGGGCGT+AGG | + | chr8.4:56786751-56786770 | MS.gene78669:CDS | 60.0% | |
| !! | ATTGGCCTTGGCCGCATCAC+TGG | + | chr8.4:56788495-56788514 | MS.gene78669:CDS | 60.0% |
| !! | TTGGCCTTGGCCGCATCACT+GGG | + | chr8.4:56788496-56788515 | MS.gene78669:CDS | 60.0% |
| TGACCCCAGTGATGCGGCCA+AGG | - | chr8.4:56788503-56788522 | None:intergenic | 65.0% | |
| ! | TGGCCTTGGCCGCATCACTG+GGG | + | chr8.4:56788497-56788516 | MS.gene78669:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 56785043 | 56789332 | 56785043 | ID=MS.gene78669 |
| chr8.4 | mRNA | 56785043 | 56789332 | 56785043 | ID=MS.gene78669.t1;Parent=MS.gene78669 |
| chr8.4 | exon | 56785043 | 56785184 | 56785043 | ID=MS.gene78669.t1.exon1;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56785043 | 56785184 | 56785043 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56785360 | 56785400 | 56785360 | ID=MS.gene78669.t1.exon2;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56785360 | 56785400 | 56785360 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56785972 | 56786032 | 56785972 | ID=MS.gene78669.t1.exon3;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56785972 | 56786032 | 56785972 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56786120 | 56786222 | 56786120 | ID=MS.gene78669.t1.exon4;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56786120 | 56786222 | 56786120 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56786327 | 56786429 | 56786327 | ID=MS.gene78669.t1.exon5;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56786327 | 56786429 | 56786327 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56786612 | 56786665 | 56786612 | ID=MS.gene78669.t1.exon6;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56786612 | 56786665 | 56786612 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56786751 | 56786813 | 56786751 | ID=MS.gene78669.t1.exon7;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56786751 | 56786813 | 56786751 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56787137 | 56787186 | 56787137 | ID=MS.gene78669.t1.exon8;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56787137 | 56787186 | 56787137 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56787290 | 56787365 | 56787290 | ID=MS.gene78669.t1.exon9;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56787290 | 56787365 | 56787290 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56787735 | 56787914 | 56787735 | ID=MS.gene78669.t1.exon10;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56787735 | 56787914 | 56787735 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56788014 | 56788101 | 56788014 | ID=MS.gene78669.t1.exon11;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56788014 | 56788101 | 56788014 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56788433 | 56788518 | 56788433 | ID=MS.gene78669.t1.exon12;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56788433 | 56788518 | 56788433 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56788609 | 56788716 | 56788609 | ID=MS.gene78669.t1.exon13;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56788609 | 56788716 | 56788609 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56788833 | 56788877 | 56788833 | ID=MS.gene78669.t1.exon14;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56788833 | 56788877 | 56788833 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56788970 | 56789058 | 56788970 | ID=MS.gene78669.t1.exon15;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56788970 | 56789058 | 56788970 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56789189 | 56789232 | 56789189 | ID=MS.gene78669.t1.exon16;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56789189 | 56789232 | 56789189 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| chr8.4 | exon | 56789307 | 56789332 | 56789307 | ID=MS.gene78669.t1.exon17;Parent=MS.gene78669.t1 |
| chr8.4 | CDS | 56789307 | 56789332 | 56789307 | ID=cds.MS.gene78669.t1;Parent=MS.gene78669.t1 |
| Gene Sequence |
| Protein sequence |
