Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78667.t1 | XP_013445188.1 | 96.9 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 2.00E-246 | 861.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78667.t1 | Q8RWN2 | 54.9 | 455 | 195 | 2 | 4 | 448 | 3 | 457 | 5.4e-147 | 522.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78667.t1 | A0A072TNX5 | 96.9 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 1.5e-246 | 861.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene78667 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene78667 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene78667 | 0.808251 | 3.39E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene78667 | 0.83098 | 2.16E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene78667 | 0.873651 | 1.25E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene78667 | 0.806886 | 6.61E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene78667 | 0.855074 | 8.05E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene78667 | 0.806061 | 9.88E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene78667 | 0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene78667 | 0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene78667 | 0.884477 | 1.85E-71 | -1.69E-46 |
| MS.gene055116 | MS.gene78667 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene78667 | 0.845353 | 4.28E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene78667 | 0.826824 | 2.19E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene78667 | 0.829299 | 5.56E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene78667 | 0.829053 | 6.38E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene78667 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene78667 | 0.824138 | 9.49E-54 | -1.69E-46 |
| MS.gene057825 | MS.gene78667 | 0.808877 | 2.50E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene78667 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene78667 | 0.818942 | 1.51E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene78667 | 0.819088 | 1.40E-52 | -1.69E-46 |
| MS.gene059011 | MS.gene78667 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene78667 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene78667 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene78667 | 0.812665 | 3.78E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene78667 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene78667 | 0.811124 | 8.19E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene78667 | 0.832975 | 6.96E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene78667 | 0.812503 | 4.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78667 | MS.gene79081 | PPI |
| MS.gene78667 | MS.gene064910 | PPI |
| MS.gene78667 | MS.gene51995 | PPI |
| MS.gene063906 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene016425 | PPI |
| MS.gene51992 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene75531 | PPI |
| MS.gene78667 | MS.gene038683 | PPI |
| MS.gene78667 | MS.gene75533 | PPI |
| MS.gene59758 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene063905 | PPI |
| MS.gene064455 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene016422 | PPI |
| MS.gene78667 | MS.gene78668 | PPI |
| MS.gene51712 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene045176 | PPI |
| MS.gene59757 | MS.gene78667 | PPI |
| MS.gene067076 | MS.gene78667 | PPI |
| MS.gene78669 | MS.gene78667 | PPI |
| MS.gene063903 | MS.gene78667 | PPI |
| MS.gene016424 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene045173 | PPI |
| MS.gene56347 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene59760 | PPI |
| MS.gene063904 | MS.gene78667 | PPI |
| MS.gene78670 | MS.gene78667 | PPI |
| MS.gene016423 | MS.gene78667 | PPI |
| MS.gene78667 | MS.gene009215 | PPI |
| MS.gene59759 | MS.gene78667 | PPI |
| MS.gene51711 | MS.gene78667 | PPI |
| MS.gene79081 | MS.gene78667 | PPI |
| MS.gene56348 | MS.gene78667 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78667.t1 | MTR_8g042870 | 96.875 | 448 | 14 | 0 | 1 | 448 | 1 | 448 | 0.0 | 894 |
| MS.gene78667.t1 | MTR_8g042780 | 87.557 | 442 | 55 | 0 | 7 | 448 | 3 | 444 | 0.0 | 820 |
| MS.gene78667.t1 | MTR_8g042780 | 86.916 | 428 | 56 | 0 | 7 | 434 | 3 | 430 | 0.0 | 786 |
| MS.gene78667.t1 | MTR_8g042770 | 80.044 | 451 | 87 | 1 | 1 | 448 | 1 | 451 | 0.0 | 772 |
| MS.gene78667.t1 | MTR_3g010820 | 69.912 | 452 | 131 | 2 | 1 | 448 | 1 | 451 | 0.0 | 670 |
| MS.gene78667.t1 | MTR_8g062990 | 68.980 | 461 | 133 | 3 | 1 | 452 | 1 | 460 | 0.0 | 670 |
| MS.gene78667.t1 | MTR_3g086440 | 68.736 | 451 | 137 | 2 | 1 | 448 | 1 | 450 | 0.0 | 636 |
| MS.gene78667.t1 | MTR_3g010850 | 65.625 | 448 | 148 | 2 | 4 | 448 | 2 | 446 | 0.0 | 599 |
| MS.gene78667.t1 | MTR_3g010850 | 68.000 | 400 | 122 | 2 | 52 | 448 | 38 | 434 | 0.0 | 551 |
| MS.gene78667.t1 | MTR_8g042820 | 86.786 | 280 | 37 | 0 | 154 | 433 | 34 | 313 | 0.0 | 510 |
| MS.gene78667.t1 | MTR_1194s0010 | 87.075 | 147 | 19 | 0 | 7 | 153 | 3 | 149 | 4.34e-92 | 276 |
| MS.gene78667.t1 | MTR_1157s0010 | 86.992 | 123 | 16 | 0 | 326 | 448 | 2 | 124 | 4.99e-71 | 222 |
| MS.gene78667.t1 | MTR_8g075280 | 31.818 | 198 | 101 | 7 | 34 | 230 | 98 | 262 | 4.84e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78667.t1 | AT5G13750 | 56.696 | 448 | 190 | 3 | 4 | 448 | 3 | 449 | 0.0 | 542 |
| MS.gene78667.t1 | AT5G13740 | 54.945 | 455 | 195 | 2 | 4 | 448 | 3 | 457 | 0.0 | 535 |
| MS.gene78667.t1 | AT5G13740 | 55.000 | 440 | 188 | 2 | 4 | 433 | 3 | 442 | 2.63e-180 | 511 |
| MS.gene78667.t1 | AT3G43790 | 51.398 | 465 | 217 | 3 | 1 | 459 | 1 | 462 | 2.23e-178 | 508 |
| MS.gene78667.t1 | AT3G43790 | 51.398 | 465 | 217 | 3 | 1 | 459 | 1 | 462 | 2.23e-178 | 508 |
| MS.gene78667.t1 | AT3G43790 | 51.613 | 465 | 212 | 3 | 1 | 455 | 1 | 462 | 3.60e-178 | 507 |
| MS.gene78667.t1 | AT3G43790 | 51.613 | 465 | 212 | 3 | 1 | 455 | 1 | 462 | 3.60e-178 | 507 |
| MS.gene78667.t1 | AT5G13750 | 54.146 | 410 | 184 | 3 | 4 | 410 | 3 | 411 | 3.43e-166 | 474 |
| MS.gene78667.t1 | AT5G13750 | 54.146 | 410 | 184 | 3 | 4 | 410 | 3 | 411 | 3.43e-166 | 474 |
| MS.gene78667.t1 | AT5G13750 | 57.576 | 363 | 151 | 2 | 89 | 448 | 1 | 363 | 5.52e-156 | 447 |
| MS.gene78667.t1 | AT3G43790 | 50.000 | 408 | 196 | 2 | 1 | 403 | 1 | 405 | 8.38e-151 | 435 |
| MS.gene78667.t1 | AT5G13940 | 41.558 | 77 | 29 | 1 | 272 | 348 | 11 | 71 | 8.51e-14 | 74.3 |
| MS.gene78667.t1 | AT5G13940 | 41.558 | 77 | 29 | 1 | 272 | 348 | 162 | 222 | 1.27e-13 | 73.9 |
Find 101 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCCTTCCTTTATTTCA+TGG | 0.165001 | 8.4:+56752615 | MS.gene78667:CDS |
| GGTGATGTTCTTTCAATTTC+AGG | 0.192163 | 8.4:+56755204 | MS.gene78667:CDS |
| AGCAATAACATTCTTAAGTA+TGG | 0.238047 | 8.4:-56755576 | None:intergenic |
| CCCAGCAATAGGAGGCTATT+TGG | 0.240770 | 8.4:+56754012 | MS.gene78667:CDS |
| AGTTACTATGCTGGTTATAT+TGG | 0.247965 | 8.4:+56753343 | MS.gene78667:CDS |
| TATTTCCAAAAGACTCCTTT+TGG | 0.262117 | 8.4:+56754311 | MS.gene78667:CDS |
| ATTGTCTTGGCCCGCATCAC+TGG | 0.268959 | 8.4:+56755382 | MS.gene78667:CDS |
| CGAAAACCTGTATTAATAAT+GGG | 0.292773 | 8.4:+56753519 | MS.gene78667:CDS |
| TTTCTTCTCGGAGGTTTAAA+TGG | 0.293841 | 8.4:+56753703 | MS.gene78667:CDS |
| GCCAAATAGCCTCCTATTGC+TGG | 0.306470 | 8.4:-56754013 | None:intergenic |
| TCGAAAACCTGTATTAATAA+TGG | 0.307777 | 8.4:+56753518 | MS.gene78667:CDS |
| GTAAAGCAGGGCAAGAAGTA+TGG | 0.308634 | 8.4:-56754452 | None:intergenic |
| TTATCCCAAAAGGAGTCTTT+TGG | 0.310679 | 8.4:-56754316 | None:intergenic |
| GATGTTTCACAGCTGTATTA+TGG | 0.319545 | 8.4:+56753472 | MS.gene78667:CDS |
| TTCCATTAGCTGCTCCTCTT+TGG | 0.329427 | 8.4:-56755862 | None:intergenic |
| CTACTAGTCCTCTGAGGCTA+GGG | 0.343324 | 8.4:+56755154 | MS.gene78667:CDS |
| GATGCCGAAGCTTTAGAAAA+TGG | 0.351168 | 8.4:+56754901 | MS.gene78667:CDS |
| AATACTAATCACAATGTATA+AGG | 0.356429 | 8.4:-56755549 | None:intergenic |
| CGAGAAGAGCACCAAGCTAT+AGG | 0.358397 | 8.4:+56753859 | MS.gene78667:CDS |
| ATTTCAGGTTAGTGCAGCTT+GGG | 0.360083 | 8.4:+56753970 | MS.gene78667:intron |
| GCAATGATAGATGACATTAA+AGG | 0.367674 | 8.4:-56754976 | None:intergenic |
| TAAAGCTTCGGCATCACCTT+TGG | 0.367886 | 8.4:-56754893 | None:intergenic |
| TTGTCTTGGCCCGCATCACT+GGG | 0.372666 | 8.4:+56755383 | MS.gene78667:CDS |
| ATGTTTCACAGCTGTATTAT+GGG | 0.376227 | 8.4:+56753473 | MS.gene78667:CDS |
| TTAATTGTTGGCCCAGCAAT+AGG | 0.378147 | 8.4:+56754001 | MS.gene78667:CDS |
| ATAAACTCACCATGAAATAA+AGG | 0.383235 | 8.4:-56752624 | None:intergenic |
| ATAATCCCCATTATTAATAC+AGG | 0.384478 | 8.4:-56753525 | None:intergenic |
| CAGTAGCAATCGTCTGCATC+TGG | 0.399008 | 8.4:+56754495 | MS.gene78667:CDS |
| CACATTATTCGGCCTTAGTA+CGG | 0.407588 | 8.4:+56753654 | MS.gene78667:CDS |
| GTTAGTGCAGCTTGGGGCAT+AGG | 0.410852 | 8.4:+56753977 | MS.gene78667:CDS |
| CACCAAAGAGGAGCAGCTAA+TGG | 0.424168 | 8.4:+56755860 | MS.gene78667:CDS |
| ATTTGTGGGTATTTGTCTAC+AGG | 0.428406 | 8.4:-56754289 | None:intergenic |
| TGGGGCATAGGTTTAATTGT+TGG | 0.442160 | 8.4:+56753989 | MS.gene78667:CDS |
| CACAGCTGTATTATGGGGAA+TGG | 0.442320 | 8.4:+56753479 | MS.gene78667:CDS |
| GCCTGACAACATTGCTATGA+AGG | 0.444106 | 8.4:-56755522 | None:intergenic |
| GCTACTAGTCCTCTGAGGCT+AGG | 0.444293 | 8.4:+56755153 | MS.gene78667:CDS |
| CCCTTCATAGCAATGTTGTC+AGG | 0.446429 | 8.4:+56755521 | MS.gene78667:CDS |
| GATTTCAGGTTAGTGCAGCT+TGG | 0.458361 | 8.4:+56753969 | MS.gene78667:intron |
| AATCGTCTGCATCTGGATTC+CGG | 0.461539 | 8.4:+56754502 | MS.gene78667:CDS |
| GTGATGCGGGCCAAGACAAT+AGG | 0.462761 | 8.4:-56755379 | None:intergenic |
| GGAGGTTTAAATGGCGTGCT+TGG | 0.463077 | 8.4:+56753712 | MS.gene78667:CDS |
| CATATGGATATATGAAAAGT+TGG | 0.474064 | 8.4:-56755339 | None:intergenic |
| AAGGGATAACTTTGCAAAAG+TGG | 0.475663 | 8.4:-56755503 | None:intergenic |
| ATGATGATTGTTTACAGTTG+AGG | 0.483621 | 8.4:-56756126 | None:intergenic |
| AAAGCTGTTGGACCTGCTGC+AGG | 0.494052 | 8.4:+56755911 | MS.gene78667:CDS |
| ATTGTCACGAGATTTCTTCT+CGG | 0.495718 | 8.4:+56753691 | MS.gene78667:CDS |
| AAGTGCTGATATTGTAAAGC+AGG | 0.496000 | 8.4:-56754465 | None:intergenic |
| AAAACTGACCCCAGTGATGC+GGG | 0.497700 | 8.4:-56755392 | None:intergenic |
| ATGGATGCTTCTTTCCTACC+AGG | 0.498098 | 8.4:+56756097 | MS.gene78667:CDS |
| AAATATGAGAGAGCCATTGT+TGG | 0.503789 | 8.4:+56752217 | MS.gene78667:CDS |
| ACTTAGGTGACGATTACAAC+GGG | 0.505452 | 8.4:+56755712 | MS.gene78667:intron |
| ATTATGACATGTACCTTCAC+TGG | 0.505846 | 8.4:-56753736 | None:intergenic |
| ACATTATTCGGCCTTAGTAC+GGG | 0.508387 | 8.4:+56753655 | MS.gene78667:CDS |
| ATAACTTTGCAAAAGTGGTA+TGG | 0.513604 | 8.4:-56755498 | None:intergenic |
| GCTGATATTAGTTACTATGC+TGG | 0.515027 | 8.4:+56753334 | MS.gene78667:CDS |
| TGAGGATTGTCCTGGTTGTA+AGG | 0.517571 | 8.4:+56752256 | MS.gene78667:CDS |
| TATTGCTTCTTCTCCAACAA+TGG | 0.519872 | 8.4:-56752230 | None:intergenic |
| GTACACTTACTTATCCCAAA+AGG | 0.520784 | 8.4:-56754326 | None:intergenic |
| GTAGGATCTTCATACATGCT+TGG | 0.530305 | 8.4:+56753447 | MS.gene78667:intron |
| AGCTTGTGGACCTATTGTCT+TGG | 0.531880 | 8.4:+56755369 | MS.gene78667:CDS |
| TAAAGCAGGGCAAGAAGTAT+GGG | 0.534775 | 8.4:-56754451 | None:intergenic |
| CAAGCAAATGAGCTTAATGA+AGG | 0.535127 | 8.4:+56752284 | MS.gene78667:CDS |
| AAGGGAAAGAGAGATGATGT+AGG | 0.538040 | 8.4:-56752601 | None:intergenic |
| TACTAGTCCTCTGAGGCTAG+GGG | 0.546079 | 8.4:+56755155 | MS.gene78667:CDS |
| TTGGTTAACACAGATTAACT+TGG | 0.546815 | 8.4:+56756062 | MS.gene78667:intron |
| CCTGACAACATTGCTATGAA+GGG | 0.553813 | 8.4:-56755521 | None:intergenic |
| AATAGGAGGCTATTTGGCTC+AGG | 0.557652 | 8.4:+56754018 | MS.gene78667:CDS |
| CCAAATAGCCTCCTATTGCT+GGG | 0.558164 | 8.4:-56754012 | None:intergenic |
| CAATACTATGAGGATTGTCC+TGG | 0.559637 | 8.4:+56752248 | MS.gene78667:CDS |
| ATGTCTCTATTCAAAGCTGT+TGG | 0.560681 | 8.4:+56755899 | MS.gene78667:CDS |
| CACATTGTACCACCTGCAGC+AGG | 0.568476 | 8.4:-56755923 | None:intergenic |
| AACTTGGTCACAAAAGCGTA+TGG | 0.570630 | 8.4:+56756078 | MS.gene78667:CDS |
| TCATGATATTGCTTATCAAG+AGG | 0.578973 | 8.4:+56755017 | MS.gene78667:CDS |
| ACTCACCATGAAATAAAGGA+AGG | 0.582200 | 8.4:-56752620 | None:intergenic |
| CGGTAGAAAGTCCTATAGCT+TGG | 0.583615 | 8.4:-56753870 | None:intergenic |
| GCTTGTTCCACCTTACAACC+AGG | 0.584931 | 8.4:-56752266 | None:intergenic |
| ATTGTTGGCCCAGCAATAGG+AGG | 0.585894 | 8.4:+56754004 | MS.gene78667:CDS |
| GGAGAAGAAGCAATACTATG+AGG | 0.594400 | 8.4:+56752238 | MS.gene78667:CDS |
| TGGCGTGCTTGGACCAGTGA+AGG | 0.595603 | 8.4:+56753723 | MS.gene78667:CDS |
| GTCACGAGATTTCTTCTCGG+AGG | 0.595988 | 8.4:+56753694 | MS.gene78667:CDS |
| CTCACCATGAAATAAAGGAA+GGG | 0.600349 | 8.4:-56752619 | None:intergenic |
| GAAAACTGACCCCAGTGATG+CGG | 0.606431 | 8.4:-56755393 | None:intergenic |
| GAAAACCTGTATTAATAATG+GGG | 0.613201 | 8.4:+56753520 | MS.gene78667:CDS |
| TGTTTCACAGCTGTATTATG+GGG | 0.615339 | 8.4:+56753474 | MS.gene78667:CDS |
| AAGTTTACAACTGATGATGT+TGG | 0.618360 | 8.4:+56755183 | MS.gene78667:CDS |
| TTTCAGGTTAGTGCAGCTTG+GGG | 0.625652 | 8.4:+56753971 | MS.gene78667:intron |
| ACTAGTCCTCTGAGGCTAGG+GGG | 0.629834 | 8.4:+56755156 | MS.gene78667:CDS |
| AAACAGGAACAACACCAAAG+AGG | 0.630869 | 8.4:+56755848 | MS.gene78667:intron |
| AGTTGAGGATCAAACCTGGT+AGG | 0.633362 | 8.4:-56756111 | None:intergenic |
| AGTGCTGATATTGTAAAGCA+GGG | 0.641165 | 8.4:-56754464 | None:intergenic |
| CCTTGTACAAAATCGAGTCG+TGG | 0.645928 | 8.4:+56755741 | MS.gene78667:CDS |
| ACACTTCACAATCACAATGG+TGG | 0.661203 | 8.4:+56754862 | MS.gene78667:CDS |
| TTACAGTTGAGGATCAAACC+TGG | 0.661634 | 8.4:-56756115 | None:intergenic |
| GGAATGGTTTCAGATCGCTA+TGG | 0.663331 | 8.4:+56753495 | MS.gene78667:CDS |
| AATGGTGGCAAAGAGTCCAA+AGG | 0.667950 | 8.4:+56754877 | MS.gene78667:CDS |
| GACTTAGGTGACGATTACAA+CGG | 0.675838 | 8.4:+56755711 | MS.gene78667:intron |
| GCTGTTGGACCTGCTGCAGG+TGG | 0.677115 | 8.4:+56755914 | MS.gene78667:CDS |
| GGATTGTCCTGGTTGTAAGG+TGG | 0.686354 | 8.4:+56752259 | MS.gene78667:CDS |
| GAAACACTTCACAATCACAA+TGG | 0.698816 | 8.4:+56754859 | MS.gene78667:CDS |
| TATGGGCTACTAGTCCTCTG+AGG | 0.728182 | 8.4:+56755148 | MS.gene78667:CDS |
| TGTCTTGGCCCGCATCACTG+GGG | 0.741366 | 8.4:+56755384 | MS.gene78667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAACTTATATAAATTAA+AGG | - | chr8.4:56755092-56755111 | None:intergenic | 10.0% |
| !!! | ATATTGTTTCTTTTTTTTTT+TGG | + | chr8.4:56754583-56754602 | MS.gene78667:intron | 10.0% |
| !!! | TATAATCAAAAGTTTTATAA+TGG | - | chr8.4:56752315-56752334 | None:intergenic | 10.0% |
| !!! | TTATAAAACTTTTGATTATA+TGG | + | chr8.4:56752315-56752334 | MS.gene78667:CDS | 10.0% |
| !! | AAAACTAAATAATTCAACTT+TGG | + | chr8.4:56754371-56754390 | MS.gene78667:intron | 15.0% |
| !! | ACTCTTTGTATTATATTTAA+TGG | + | chr8.4:56755685-56755704 | MS.gene78667:intron | 15.0% |
| !! | AGGTAAATTTCTAATTATTT+AGG | + | chr8.4:56755037-56755056 | MS.gene78667:intron | 15.0% |
| !! | ATTCTAATAAATAATTGAAG+CGG | + | chr8.4:56754721-56754740 | MS.gene78667:intron | 15.0% |
| !! | TAATAATATCAAAATTTGTG+AGG | - | chr8.4:56755797-56755816 | None:intergenic | 15.0% |
| !! | TTAATAACTATAATTGATGA+GGG | - | chr8.4:56754828-56754847 | None:intergenic | 15.0% |
| !! | TTTAATAACTATAATTGATG+AGG | - | chr8.4:56754829-56754848 | None:intergenic | 15.0% |
| !!! | AAATCTTTTGAAATGAAATA+CGG | - | chr8.4:56752993-56753012 | None:intergenic | 15.0% |
| !!! | AATAAATATGTATCATTTTC+AGG | + | chr8.4:56755245-56755264 | MS.gene78667:intron | 15.0% |
| !!! | AATAATGCAACATTTATTTT+AGG | + | chr8.4:56753282-56753301 | MS.gene78667:intron | 15.0% |
| !!! | CAATTAATTTTGACAAAAAT+TGG | + | chr8.4:56752912-56752931 | MS.gene78667:intron | 15.0% |
| !!! | CTAATTATTTAGGTTAAAAA+TGG | + | chr8.4:56755047-56755066 | MS.gene78667:intron | 15.0% |
| !!! | TATTGTTATTTCAATTTTGA+AGG | + | chr8.4:56754426-56754445 | MS.gene78667:intron | 15.0% |
| !! | AAGTAAAATATGAACAATTG+TGG | - | chr8.4:56753614-56753633 | None:intergenic | 20.0% |
| !! | AATACTAATCACAATGTATA+AGG | - | chr8.4:56755552-56755571 | None:intergenic | 20.0% |
| !! | AGTAAAATATGAACAATTGT+GGG | - | chr8.4:56753613-56753632 | None:intergenic | 20.0% |
| !! | ATAGTTATTAAACTATTTGC+AGG | + | chr8.4:56754837-56754856 | MS.gene78667:intron | 20.0% |
| !! | GAAACTAGAAATTTACATTA+TGG | - | chr8.4:56753172-56753191 | None:intergenic | 20.0% |
| !! | TGAAATATGTTATGTTACTA+TGG | + | chr8.4:56755453-56755472 | MS.gene78667:intron | 20.0% |
| !! | TGATAAAAGACTTAAATGAA+TGG | - | chr8.4:56753389-56753408 | None:intergenic | 20.0% |
| !! | TTGATATTATTAGTTGTTGA+TGG | + | chr8.4:56755805-56755824 | MS.gene78667:intron | 20.0% |
| !!! | AAAACTTTTGATTATATGGA+TGG | + | chr8.4:56752319-56752338 | MS.gene78667:CDS | 20.0% |
| !!! | AAGAACAATTATTCTAAAAG+TGG | - | chr8.4:56752386-56752405 | None:intergenic | 20.0% |
| !!! | ATCATGGACAAAATTATTTT+TGG | + | chr8.4:56753060-56753079 | MS.gene78667:intron | 20.0% |
| !!! | ATGATTTCTTTGTTTTTTCT+AGG | + | chr8.4:56754781-56754800 | MS.gene78667:intron | 20.0% |
| !!! | CAATCAATTATACTGAATTT+TGG | - | chr8.4:56755637-56755656 | None:intergenic | 20.0% |
| !!! | GAAATCATTTTGTATTATCA+TGG | - | chr8.4:56754769-56754788 | None:intergenic | 20.0% |
| !!! | TACATTATTTGAAATGCATT+TGG | + | chr8.4:56754119-56754138 | MS.gene78667:intron | 20.0% |
| !!! | TACTAACTTGTGAAATTATT+AGG | + | chr8.4:56755298-56755317 | MS.gene78667:intron | 20.0% |
| !!! | TGACATTTGTTATTTCTTAA+AGG | + | chr8.4:56752697-56752716 | MS.gene78667:intron | 20.0% |
| !!! | TTTGGTTAATAATTTTCCTT+CGG | + | chr8.4:56753078-56753097 | MS.gene78667:intron | 20.0% |
| ! | ACAAGATATGACAAAACAAA+GGG | - | chr8.4:56753206-56753225 | None:intergenic | 25.0% |
| ! | AGCAATAACATTCTTAAGTA+TGG | - | chr8.4:56755579-56755598 | None:intergenic | 25.0% |
| ! | ATAAACTCACCATGAAATAA+AGG | - | chr8.4:56752627-56752646 | None:intergenic | 25.0% |
| ! | ATAATCCCCATTATTAATAC+AGG | - | chr8.4:56753528-56753547 | None:intergenic | 25.0% |
| ! | ATGAAGATTGAAAATGTTGT+AGG | + | chr8.4:56753429-56753448 | MS.gene78667:intron | 25.0% |
| ! | CACACTTTGAATTATTATGA+TGG | - | chr8.4:56753945-56753964 | None:intergenic | 25.0% |
| ! | CATATGGATATATGAAAAGT+TGG | - | chr8.4:56755342-56755361 | None:intergenic | 25.0% |
| ! | CCTTACATAACTTATTCAAA+AGG | - | chr8.4:56752502-56752521 | None:intergenic | 25.0% |
| ! | CGAAAACCTGTATTAATAAT+GGG | + | chr8.4:56753519-56753538 | MS.gene78667:CDS | 25.0% |
| ! | GAAAACCTGTATTAATAATG+GGG | + | chr8.4:56753520-56753539 | MS.gene78667:CDS | 25.0% |
| ! | TCGAAAACCTGTATTAATAA+TGG | + | chr8.4:56753518-56753537 | MS.gene78667:CDS | 25.0% |
| ! | TGTAAGTGAATCTCTTTAAA+TGG | + | chr8.4:56755598-56755617 | MS.gene78667:intron | 25.0% |
| ! | TTCATCATCATTCTTGTATA+TGG | + | chr8.4:56753131-56753150 | MS.gene78667:intron | 25.0% |
| ! | TTGTATATGGTACAAACAAT+TGG | + | chr8.4:56753144-56753163 | MS.gene78667:intron | 25.0% |
| !! | AAAAGAGGTTTTCATTCTTT+TGG | - | chr8.4:56754948-56754967 | None:intergenic | 25.0% |
| !! | ACTTTTCATATATCCATATG+TGG | + | chr8.4:56755342-56755361 | MS.gene78667:CDS | 25.0% |
| !! | ATGAAAACCTCTTTTTGAAT+TGG | + | chr8.4:56754953-56754972 | MS.gene78667:CDS | 25.0% |
| !! | CCTTTTGAATAAGTTATGTA+AGG | + | chr8.4:56752499-56752518 | MS.gene78667:intron | 25.0% |
| !! | TGTTCTTTTTCTTATGATCT+TGG | + | chr8.4:56756043-56756062 | MS.gene78667:intron | 25.0% |
| !! | TTTTGACAAAAATTGGAGAA+GGG | + | chr8.4:56752919-56752938 | MS.gene78667:intron | 25.0% |
| !!! | AGTCTTTTGGAAATATTTGT+GGG | - | chr8.4:56754306-56754325 | None:intergenic | 25.0% |
| !!! | ATTTTGACAAAAATTGGAGA+AGG | + | chr8.4:56752918-56752937 | MS.gene78667:intron | 25.0% |
| !!! | GCAACATTTATTTTAGGTAA+GGG | + | chr8.4:56753288-56753307 | MS.gene78667:intron | 25.0% |
| !!! | GTCATTTTCAACACATTATT+CGG | + | chr8.4:56753643-56753662 | MS.gene78667:CDS | 25.0% |
| !!! | TATATTTAATGGACTGACTT+AGG | + | chr8.4:56755696-56755715 | MS.gene78667:intron | 25.0% |
| !!! | TCTTTAGGTTTTCTCATTAT+GGG | + | chr8.4:56755131-56755150 | MS.gene78667:intron | 25.0% |
| !!! | TGCAACATTTATTTTAGGTA+AGG | + | chr8.4:56753287-56753306 | MS.gene78667:intron | 25.0% |
| !!! | TTCTTTAGGTTTTCTCATTA+TGG | + | chr8.4:56755130-56755149 | MS.gene78667:intron | 25.0% |
| AAACTGATAGAAACACAAGA+TGG | - | chr8.4:56754400-56754419 | None:intergenic | 30.0% | |
| AACTGATAGAAACACAAGAT+GGG | - | chr8.4:56754399-56754418 | None:intergenic | 30.0% | |
| AGAAGAATTGTTGAGACTTA+CGG | - | chr8.4:56753893-56753912 | None:intergenic | 30.0% | |
| AGTTAGATAGAGAAGAACAA+AGG | - | chr8.4:56752555-56752574 | None:intergenic | 30.0% | |
| ATAACTTTGCAAAAGTGGTA+TGG | - | chr8.4:56755501-56755520 | None:intergenic | 30.0% | |
| ATGAAATACTGGAAAAGACT+AGG | - | chr8.4:56753116-56753135 | None:intergenic | 30.0% | |
| ATGATGATTGTTTACAGTTG+AGG | - | chr8.4:56756129-56756148 | None:intergenic | 30.0% | |
| ATGTTTCACAGCTGTATTAT+GGG | + | chr8.4:56753473-56753492 | MS.gene78667:CDS | 30.0% | |
| CACAAGATATGACAAAACAA+AGG | - | chr8.4:56753207-56753226 | None:intergenic | 30.0% | |
| CATGGTGAGTTTATTTATCA+AGG | + | chr8.4:56752633-56752652 | MS.gene78667:intron | 30.0% | |
| GCAATGATAGATGACATTAA+AGG | - | chr8.4:56754979-56754998 | None:intergenic | 30.0% | |
| TCAAAGTGTGATATGATTTC+AGG | + | chr8.4:56753955-56753974 | MS.gene78667:intron | 30.0% | |
| TCATGATATTGCTTATCAAG+AGG | + | chr8.4:56755017-56755036 | MS.gene78667:CDS | 30.0% | |
| TTAAAGGCCAATTCAAAAAG+AGG | - | chr8.4:56754963-56754982 | None:intergenic | 30.0% | |
| TTGGTTAACACAGATTAACT+TGG | + | chr8.4:56756062-56756081 | MS.gene78667:intron | 30.0% | |
| ! | AAGTTTACAACTGATGATGT+TGG | + | chr8.4:56755183-56755202 | MS.gene78667:CDS | 30.0% |
| ! | AGTTACTATGCTGGTTATAT+TGG | + | chr8.4:56753343-56753362 | MS.gene78667:CDS | 30.0% |
| ! | ATAATATCTAAGACGCATAC+CGG | - | chr8.4:56754524-56754543 | None:intergenic | 30.0% |
| ! | ATGGAATTGTGACATTGATT+TGG | + | chr8.4:56755824-56755843 | MS.gene78667:intron | 30.0% |
| ! | ATTTCCAAAAGACTCCTTTT+GGG | + | chr8.4:56754312-56754331 | MS.gene78667:CDS | 30.0% |
| ! | CAAGAATGATGATGAAATAC+TGG | - | chr8.4:56753127-56753146 | None:intergenic | 30.0% |
| ! | TATTTCCAAAAGACTCCTTT+TGG | + | chr8.4:56754311-56754330 | MS.gene78667:CDS | 30.0% |
| ! | TGTGTTCTAAGTTCTTAGTA+CGG | + | chr8.4:56752433-56752452 | MS.gene78667:intron | 30.0% |
| !! | ACTTTTGATTATATGGATGG+TGG | + | chr8.4:56752322-56752341 | MS.gene78667:CDS | 30.0% |
| !! | ATGAATATGTGCCACTTATA+AGG | - | chr8.4:56754214-56754233 | None:intergenic | 30.0% |
| !! | CTATTCATGTTGCTTTCTTT+AGG | + | chr8.4:56755116-56755135 | MS.gene78667:intron | 30.0% |
| !! | GAGTCTTTTGGAAATATTTG+TGG | - | chr8.4:56754307-56754326 | None:intergenic | 30.0% |
| !! | TTTCCTAATTTGTTGTGTCA+CGG | + | chr8.4:56752470-56752489 | MS.gene78667:intron | 30.0% |
| AAATATGAGAGAGCCATTGT+TGG | + | chr8.4:56752217-56752236 | MS.gene78667:CDS | 35.0% | |
| AAGGGATAACTTTGCAAAAG+TGG | - | chr8.4:56755506-56755525 | None:intergenic | 35.0% | |
| ACATCAGTGTAGTAATCTTG+TGG | - | chr8.4:56752675-56752694 | None:intergenic | 35.0% | |
| ACTCACCATGAAATAAAGGA+AGG | - | chr8.4:56752623-56752642 | None:intergenic | 35.0% | |
| ATGTCTCTATTCAAAGCTGT+TGG | + | chr8.4:56755899-56755918 | MS.gene78667:CDS | 35.0% | |
| ATTATGACATGTACCTTCAC+TGG | - | chr8.4:56753739-56753758 | None:intergenic | 35.0% | |
| ATTGTCACGAGATTTCTTCT+CGG | + | chr8.4:56753691-56753710 | MS.gene78667:CDS | 35.0% | |
| ATTTGTGGGTATTTGTCTAC+AGG | - | chr8.4:56754292-56754311 | None:intergenic | 35.0% | |
| CAAGCAAATGAGCTTAATGA+AGG | + | chr8.4:56752284-56752303 | MS.gene78667:CDS | 35.0% | |
| CTCACCATGAAATAAAGGAA+GGG | - | chr8.4:56752622-56752641 | None:intergenic | 35.0% | |
| GAAACACTTCACAATCACAA+TGG | + | chr8.4:56754859-56754878 | MS.gene78667:CDS | 35.0% | |
| GATGTTTCACAGCTGTATTA+TGG | + | chr8.4:56753472-56753491 | MS.gene78667:CDS | 35.0% | |
| GCTGATATTAGTTACTATGC+TGG | + | chr8.4:56753334-56753353 | MS.gene78667:CDS | 35.0% | |
| GGTGATGTTCTTTCAATTTC+AGG | + | chr8.4:56755204-56755223 | MS.gene78667:CDS | 35.0% | |
| GTACACTTACTTATCCCAAA+AGG | - | chr8.4:56754329-56754348 | None:intergenic | 35.0% | |
| TAGGAAAAATATCGATCCGA+AGG | - | chr8.4:56753097-56753116 | None:intergenic | 35.0% | |
| TATTGCTTCTTCTCCAACAA+TGG | - | chr8.4:56752233-56752252 | None:intergenic | 35.0% | |
| TCGAAAAAGTTCAGTAGCAT+AGG | - | chr8.4:56753842-56753861 | None:intergenic | 35.0% | |
| TGTTTCACAGCTGTATTATG+GGG | + | chr8.4:56753474-56753493 | MS.gene78667:CDS | 35.0% | |
| TTTCTTCTCGGAGGTTTAAA+TGG | + | chr8.4:56753703-56753722 | MS.gene78667:CDS | 35.0% | |
| TTTCTTGTGTGTGTGTTCTT+GGG | + | chr8.4:56754180-56754199 | MS.gene78667:intron | 35.0% | |
| ! | AGAGAAGAACAAAGGTACAT+AGG | - | chr8.4:56752547-56752566 | None:intergenic | 35.0% |
| ! | CTTTCCCTTCCTTTATTTCA+TGG | + | chr8.4:56752615-56752634 | MS.gene78667:CDS | 35.0% |
| ! | GTTTCTGTCTTCATGTTTTG+TGG | + | chr8.4:56754623-56754642 | MS.gene78667:intron | 35.0% |
| ! | TCTGCACATCAGTTTTTGAA+AGG | + | chr8.4:56752844-56752863 | MS.gene78667:intron | 35.0% |
| ! | TTATCCCAAAAGGAGTCTTT+TGG | - | chr8.4:56754319-56754338 | None:intergenic | 35.0% |
| ! | TTTTCTTGTGTGTGTGTTCT+TGG | + | chr8.4:56754179-56754198 | MS.gene78667:intron | 35.0% |
| !! | AAGTGCTGATATTGTAAAGC+AGG | - | chr8.4:56754468-56754487 | None:intergenic | 35.0% |
| !! | AGTGCTGATATTGTAAAGCA+GGG | - | chr8.4:56754467-56754486 | None:intergenic | 35.0% |
| !! | GTGACATTGATTTGGAAAAC+AGG | + | chr8.4:56755832-56755851 | MS.gene78667:intron | 35.0% |
| !! | GTGCCACTTATAAGGAAAAT+AGG | - | chr8.4:56754206-56754225 | None:intergenic | 35.0% |
| !! | TTCCTAATTTGTTGTGTCAC+GGG | + | chr8.4:56752471-56752490 | MS.gene78667:intron | 35.0% |
| !!! | GCTTCCATTTTCTAAAGCTT+CGG | - | chr8.4:56754908-56754927 | None:intergenic | 35.0% |
| AAACAGGAACAACACCAAAG+AGG | + | chr8.4:56755848-56755867 | MS.gene78667:intron | 40.0% | |
| AAGGGAAAGAGAGATGATGT+AGG | - | chr8.4:56752604-56752623 | None:intergenic | 40.0% | |
| ACACTTCACAATCACAATGG+TGG | + | chr8.4:56754862-56754881 | MS.gene78667:CDS | 40.0% | |
| ACATTATTCGGCCTTAGTAC+GGG | + | chr8.4:56753655-56753674 | MS.gene78667:CDS | 40.0% | |
| ACTTAGGTGACGATTACAAC+GGG | + | chr8.4:56755712-56755731 | MS.gene78667:intron | 40.0% | |
| CAATACTATGAGGATTGTCC+TGG | + | chr8.4:56752248-56752267 | MS.gene78667:CDS | 40.0% | |
| CACATTATTCGGCCTTAGTA+CGG | + | chr8.4:56753654-56753673 | MS.gene78667:CDS | 40.0% | |
| CCATATGTGGAAAAAGCTTG+TGG | + | chr8.4:56755355-56755374 | MS.gene78667:CDS | 40.0% | |
| CCTGACAACATTGCTATGAA+GGG | - | chr8.4:56755524-56755543 | None:intergenic | 40.0% | |
| GACTTAGGTGACGATTACAA+CGG | + | chr8.4:56755711-56755730 | MS.gene78667:intron | 40.0% | |
| GGAGAAGAAGCAATACTATG+AGG | + | chr8.4:56752238-56752257 | MS.gene78667:CDS | 40.0% | |
| GTAGGATCTTCATACATGCT+TGG | + | chr8.4:56753447-56753466 | MS.gene78667:intron | 40.0% | |
| TGGGGCATAGGTTTAATTGT+TGG | + | chr8.4:56753989-56754008 | MS.gene78667:CDS | 40.0% | |
| TTAATTGTTGGCCCAGCAAT+AGG | + | chr8.4:56754001-56754020 | MS.gene78667:CDS | 40.0% | |
| TTACAGTTGAGGATCAAACC+TGG | - | chr8.4:56756118-56756137 | None:intergenic | 40.0% | |
| ! | AACTTGGTCACAAAAGCGTA+TGG | + | chr8.4:56756078-56756097 | MS.gene78667:CDS | 40.0% |
| ! | ACTTGCTAGTTGCTTCTCTA+TGG | + | chr8.4:56752867-56752886 | MS.gene78667:intron | 40.0% |
| ! | CTATGTCGCTTGAGATTACA+TGG | + | chr8.4:56753016-56753035 | MS.gene78667:intron | 40.0% |
| ! | GAACAAAGGTACATAGGACA+TGG | - | chr8.4:56752541-56752560 | None:intergenic | 40.0% |
| ! | GGGCCTATTTTCCTTATAAG+TGG | + | chr8.4:56754200-56754219 | MS.gene78667:intron | 40.0% |
| ! | TAAAGCAGGGCAAGAAGTAT+GGG | - | chr8.4:56754454-56754473 | None:intergenic | 40.0% |
| ! | TTTTGTCCATGATGTGTCAG+TGG | - | chr8.4:56753053-56753072 | None:intergenic | 40.0% |
| !! | ATTTCAGGTTAGTGCAGCTT+GGG | + | chr8.4:56753970-56753989 | MS.gene78667:intron | 40.0% |
| !! | CCACAAGCTTTTTCCACATA+TGG | - | chr8.4:56755358-56755377 | None:intergenic | 40.0% |
| !! | GACGAACTTCGTCATTTTAC+AGG | + | chr8.4:56753816-56753835 | MS.gene78667:intron | 40.0% |
| !! | GATGCCGAAGCTTTAGAAAA+TGG | + | chr8.4:56754901-56754920 | MS.gene78667:CDS | 40.0% |
| !! | TCCTAATTTGTTGTGTCACG+GGG | + | chr8.4:56752472-56752491 | MS.gene78667:intron | 40.0% |
| AATCGTCTGCATCTGGATTC+CGG | + | chr8.4:56754502-56754521 | MS.gene78667:CDS | 45.0% | |
| AATGGTGGCAAAGAGTCCAA+AGG | + | chr8.4:56754877-56754896 | MS.gene78667:CDS | 45.0% | |
| AGCTTGTGGACCTATTGTCT+TGG | + | chr8.4:56755369-56755388 | MS.gene78667:CDS | 45.0% | |
| AGTTGAGGATCAAACCTGGT+AGG | - | chr8.4:56756114-56756133 | None:intergenic | 45.0% | |
| ATGGATGCTTCTTTCCTACC+AGG | + | chr8.4:56756097-56756116 | MS.gene78667:CDS | 45.0% | |
| CACAGCTGTATTATGGGGAA+TGG | + | chr8.4:56753479-56753498 | MS.gene78667:CDS | 45.0% | |
| CCAAATAGCCTCCTATTGCT+GGG | - | chr8.4:56754015-56754034 | None:intergenic | 45.0% | |
| CCATCCAAAAACCCGTACTA+AGG | - | chr8.4:56753669-56753688 | None:intergenic | 45.0% | |
| CCCTTCATAGCAATGTTGTC+AGG | + | chr8.4:56755521-56755540 | MS.gene78667:CDS | 45.0% | |
| CCTTGTACAAAATCGAGTCG+TGG | + | chr8.4:56755741-56755760 | MS.gene78667:CDS | 45.0% | |
| CGGTAGAAAGTCCTATAGCT+TGG | - | chr8.4:56753873-56753892 | None:intergenic | 45.0% | |
| GCCTGACAACATTGCTATGA+AGG | - | chr8.4:56755525-56755544 | None:intergenic | 45.0% | |
| GGAATGGTTTCAGATCGCTA+TGG | + | chr8.4:56753495-56753514 | MS.gene78667:CDS | 45.0% | |
| GTAAAGCAGGGCAAGAAGTA+TGG | - | chr8.4:56754455-56754474 | None:intergenic | 45.0% | |
| GTCTTACCACTGACACATCA+TGG | + | chr8.4:56753044-56753063 | MS.gene78667:intron | 45.0% | |
| TAAAGCTTCGGCATCACCTT+TGG | - | chr8.4:56754896-56754915 | None:intergenic | 45.0% | |
| TCCCCGTGACACAACAAATT+AGG | - | chr8.4:56752476-56752495 | None:intergenic | 45.0% | |
| TGAGGATTGTCCTGGTTGTA+AGG | + | chr8.4:56752256-56752275 | MS.gene78667:CDS | 45.0% | |
| TTCCATTAGCTGCTCCTCTT+TGG | - | chr8.4:56755865-56755884 | None:intergenic | 45.0% | |
| ! | AATAGGAGGCTATTTGGCTC+AGG | + | chr8.4:56754018-56754037 | MS.gene78667:CDS | 45.0% |
| ! | CCACGACTCGATTTTGTACA+AGG | - | chr8.4:56755744-56755763 | None:intergenic | 45.0% |
| !! | CCTTAGTACGGGTTTTTGGA+TGG | + | chr8.4:56753666-56753685 | MS.gene78667:CDS | 45.0% |
| !! | GATTTCAGGTTAGTGCAGCT+TGG | + | chr8.4:56753969-56753988 | MS.gene78667:intron | 45.0% |
| !! | TTTCAGGTTAGTGCAGCTTG+GGG | + | chr8.4:56753971-56753990 | MS.gene78667:intron | 45.0% |
| AAAACTGACCCCAGTGATGC+GGG | - | chr8.4:56755395-56755414 | None:intergenic | 50.0% | |
| ATTGTTGGCCCAGCAATAGG+AGG | + | chr8.4:56754004-56754023 | MS.gene78667:CDS | 50.0% | |
| CACCAAAGAGGAGCAGCTAA+TGG | + | chr8.4:56755860-56755879 | MS.gene78667:CDS | 50.0% | |
| CAGTAGCAATCGTCTGCATC+TGG | + | chr8.4:56754495-56754514 | MS.gene78667:CDS | 50.0% | |
| CCCAGCAATAGGAGGCTATT+TGG | + | chr8.4:56754012-56754031 | MS.gene78667:CDS | 50.0% | |
| GAAAACTGACCCCAGTGATG+CGG | - | chr8.4:56755396-56755415 | None:intergenic | 50.0% | |
| GCCAAATAGCCTCCTATTGC+TGG | - | chr8.4:56754016-56754035 | None:intergenic | 50.0% | |
| GCTTGTTCCACCTTACAACC+AGG | - | chr8.4:56752269-56752288 | None:intergenic | 50.0% | |
| GGAGGTTTAAATGGCGTGCT+TGG | + | chr8.4:56753712-56753731 | MS.gene78667:CDS | 50.0% | |
| GGATTGTCCTGGTTGTAAGG+TGG | + | chr8.4:56752259-56752278 | MS.gene78667:CDS | 50.0% | |
| GTCACGAGATTTCTTCTCGG+AGG | + | chr8.4:56753694-56753713 | MS.gene78667:CDS | 50.0% | |
| ! | TATGGGCTACTAGTCCTCTG+AGG | + | chr8.4:56755148-56755167 | MS.gene78667:CDS | 50.0% |
| ! | TCGGCCTTAGTACGGGTTTT+TGG | + | chr8.4:56753662-56753681 | MS.gene78667:CDS | 50.0% |
| !! | CGAGAAGAGCACCAAGCTAT+AGG | + | chr8.4:56753859-56753878 | MS.gene78667:CDS | 50.0% |
| !! | CTACTAGTCCTCTGAGGCTA+GGG | + | chr8.4:56755154-56755173 | MS.gene78667:CDS | 50.0% |
| !! | TACTAGTCCTCTGAGGCTAG+GGG | + | chr8.4:56755155-56755174 | MS.gene78667:CDS | 50.0% |
| AAAGCTGTTGGACCTGCTGC+AGG | + | chr8.4:56755911-56755930 | MS.gene78667:CDS | 55.0% | |
| ATTGTCTTGGCCCGCATCAC+TGG | + | chr8.4:56755382-56755401 | MS.gene78667:CDS | 55.0% | |
| CACATTGTACCACCTGCAGC+AGG | - | chr8.4:56755926-56755945 | None:intergenic | 55.0% | |
| GTGATGCGGGCCAAGACAAT+AGG | - | chr8.4:56755382-56755401 | None:intergenic | 55.0% | |
| GTTAGTGCAGCTTGGGGCAT+AGG | + | chr8.4:56753977-56753996 | MS.gene78667:CDS | 55.0% | |
| TTCAAACCCCCTAGCCTCAG+AGG | - | chr8.4:56755165-56755184 | None:intergenic | 55.0% | |
| TTGTCTTGGCCCGCATCACT+GGG | + | chr8.4:56755383-56755402 | MS.gene78667:CDS | 55.0% | |
| !! | ACTAGTCCTCTGAGGCTAGG+GGG | + | chr8.4:56755156-56755175 | MS.gene78667:CDS | 55.0% |
| !! | GCTACTAGTCCTCTGAGGCT+AGG | + | chr8.4:56755153-56755172 | MS.gene78667:CDS | 55.0% |
| TGGCGTGCTTGGACCAGTGA+AGG | + | chr8.4:56753723-56753742 | MS.gene78667:CDS | 60.0% | |
| TGTCTTGGCCCGCATCACTG+GGG | + | chr8.4:56755384-56755403 | MS.gene78667:CDS | 60.0% | |
| GCTGTTGGACCTGCTGCAGG+TGG | + | chr8.4:56755914-56755933 | MS.gene78667:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 56752206 | 56756156 | 56752206 | ID=MS.gene78667 |
| chr8.4 | mRNA | 56752206 | 56756156 | 56752206 | ID=MS.gene78667.t1;Parent=MS.gene78667 |
| chr8.4 | exon | 56752206 | 56752356 | 56752206 | ID=MS.gene78667.t1.exon1;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56752206 | 56752356 | 56752206 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56752596 | 56752636 | 56752596 | ID=MS.gene78667.t1.exon2;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56752596 | 56752636 | 56752596 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56753304 | 56753364 | 56753304 | ID=MS.gene78667.t1.exon3;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56753304 | 56753364 | 56753304 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56753451 | 56753553 | 56753451 | ID=MS.gene78667.t1.exon4;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56753451 | 56753553 | 56753451 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56753642 | 56753744 | 56753642 | ID=MS.gene78667.t1.exon5;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56753642 | 56753744 | 56753642 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56753838 | 56753891 | 56753838 | ID=MS.gene78667.t1.exon6;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56753838 | 56753891 | 56753838 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56753977 | 56754039 | 56753977 | ID=MS.gene78667.t1.exon7;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56753977 | 56754039 | 56753977 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56754289 | 56754338 | 56754289 | ID=MS.gene78667.t1.exon8;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56754289 | 56754338 | 56754289 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56754448 | 56754523 | 56754448 | ID=MS.gene78667.t1.exon9;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56754448 | 56754523 | 56754448 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56754859 | 56755038 | 56754859 | ID=MS.gene78667.t1.exon10;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56754859 | 56755038 | 56754859 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56755138 | 56755225 | 56755138 | ID=MS.gene78667.t1.exon11;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56755138 | 56755225 | 56755138 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56755320 | 56755405 | 56755320 | ID=MS.gene78667.t1.exon12;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56755320 | 56755405 | 56755320 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56755491 | 56755598 | 56755491 | ID=MS.gene78667.t1.exon13;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56755491 | 56755598 | 56755491 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56755718 | 56755762 | 56755718 | ID=MS.gene78667.t1.exon14;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56755718 | 56755762 | 56755718 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56755854 | 56755942 | 56755854 | ID=MS.gene78667.t1.exon15;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56755854 | 56755942 | 56755854 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| chr8.4 | exon | 56756075 | 56756156 | 56756075 | ID=MS.gene78667.t1.exon16;Parent=MS.gene78667.t1 |
| chr8.4 | CDS | 56756075 | 56756156 | 56756075 | ID=cds.MS.gene78667.t1;Parent=MS.gene78667.t1 |
| Gene Sequence |
| Protein sequence |
