Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75531.t1 | XP_004502380.1 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.70E-249 | 870.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75531.t1 | Q8RWN2 | 57.4 | 481 | 198 | 3 | 1 | 474 | 1 | 481 | 2.4e-153 | 543.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75531.t1 | A0A1S2YBH2 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.0e-249 | 870.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75531.t1 | MTR_3g086440 | 94.493 | 454 | 25 | 0 | 1 | 454 | 1 | 454 | 0.0 | 853 |
| MS.gene75531.t1 | MTR_8g062990 | 74.127 | 487 | 125 | 1 | 1 | 486 | 1 | 487 | 0.0 | 758 |
| MS.gene75531.t1 | MTR_3g010820 | 73.101 | 487 | 130 | 1 | 1 | 486 | 1 | 487 | 0.0 | 751 |
| MS.gene75531.t1 | MTR_8g042770 | 69.610 | 487 | 147 | 1 | 1 | 486 | 1 | 487 | 0.0 | 733 |
| MS.gene75531.t1 | MTR_8g042780 | 69.854 | 481 | 141 | 2 | 7 | 486 | 3 | 480 | 0.0 | 715 |
| MS.gene75531.t1 | MTR_8g042870 | 68.994 | 487 | 147 | 2 | 1 | 486 | 1 | 484 | 0.0 | 694 |
| MS.gene75531.t1 | MTR_3g010850 | 70.248 | 484 | 139 | 3 | 4 | 486 | 2 | 481 | 0.0 | 688 |
| MS.gene75531.t1 | MTR_8g042780 | 70.766 | 431 | 122 | 2 | 7 | 436 | 3 | 430 | 0.0 | 649 |
| MS.gene75531.t1 | MTR_3g010850 | 67.442 | 473 | 137 | 5 | 17 | 486 | 11 | 469 | 0.0 | 629 |
| MS.gene75531.t1 | MTR_8g042820 | 69.965 | 283 | 82 | 1 | 153 | 435 | 34 | 313 | 1.10e-148 | 427 |
| MS.gene75531.t1 | MTR_1157s0010 | 67.296 | 159 | 52 | 0 | 328 | 486 | 2 | 160 | 3.35e-73 | 228 |
| MS.gene75531.t1 | MTR_1194s0010 | 68.707 | 147 | 45 | 1 | 7 | 152 | 3 | 149 | 5.38e-68 | 214 |
| MS.gene75531.t1 | MTR_8g075280 | 54.255 | 94 | 26 | 3 | 42 | 134 | 107 | 184 | 2.55e-16 | 78.2 |
| MS.gene75531.t1 | MTR_8g075280 | 35.500 | 200 | 95 | 8 | 31 | 229 | 96 | 262 | 2.72e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75531.t1 | AT5G13750 | 55.858 | 478 | 207 | 2 | 4 | 479 | 3 | 478 | 0.0 | 558 |
| MS.gene75531.t1 | AT5G13740 | 56.790 | 486 | 203 | 3 | 1 | 479 | 1 | 486 | 0.0 | 538 |
| MS.gene75531.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene75531.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene75531.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene75531.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene75531.t1 | AT5G13740 | 56.561 | 442 | 185 | 3 | 1 | 435 | 1 | 442 | 3.52e-173 | 494 |
| MS.gene75531.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene75531.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene75531.t1 | AT5G13750 | 56.345 | 394 | 168 | 2 | 88 | 479 | 1 | 392 | 1.18e-160 | 461 |
| MS.gene75531.t1 | AT3G43790 | 53.171 | 410 | 182 | 4 | 1 | 405 | 1 | 405 | 3.12e-150 | 435 |
| MS.gene75531.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 11 | 77 | 1.81e-14 | 76.6 |
| MS.gene75531.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 162 | 228 | 2.22e-14 | 76.3 |
Find 117 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATTCTGAAGTTTCTTA+TGG | 0.159088 | 3.3:+72174070 | MS.gene75531:CDS |
| ATGAAAGCCTATTTCTAAAT+TGG | 0.204663 | 3.3:+72173232 | MS.gene75531:CDS |
| CTTTCCCTTCGTTTATTTCA+TGG | 0.216855 | 3.3:+72171759 | MS.gene75531:CDS |
| GTTAACCTTGCTCGCATTGC+TGG | 0.221970 | 3.3:+72173867 | MS.gene75531:CDS |
| TTTCTTCTTGGAAGTTTAAA+TGG | 0.254939 | 3.3:+72172293 | MS.gene75531:CDS |
| TCCAGCATTAGGAGGTTATT+TGG | 0.275455 | 3.3:+72172637 | MS.gene75531:CDS |
| TGAGAGGCCAATTTAGAAAT+AGG | 0.275927 | 3.3:-72173239 | None:intergenic |
| CAAGTCCTTCAATAACATTC+AGG | 0.283968 | 3.3:-72174991 | None:intergenic |
| GGCAATGTTCTTGCAATATC+AGG | 0.291727 | 3.3:+72173522 | MS.gene75531:CDS |
| ATTTCAGGTTGTGGCAGCTT+GGG | 0.294108 | 3.3:+72172595 | MS.gene75531:intron |
| AACATCTGTTCCAAGTTCTT+TGG | 0.296273 | 3.3:-72171578 | None:intergenic |
| AGAGAAGAAAATCAAGCTTT+AGG | 0.302771 | 3.3:+72172486 | MS.gene75531:CDS |
| TCCATTCTGAAGTTTCTTAT+GGG | 0.311221 | 3.3:+72174071 | MS.gene75531:CDS |
| TGGACTCATTGCTGCCATTA+TGG | 0.312526 | 3.3:-72173143 | None:intergenic |
| AGAAAACCAGCTATAACATT+AGG | 0.313041 | 3.3:+72172109 | MS.gene75531:CDS |
| AATTGCCTGCATTTGGTTAC+CGG | 0.324014 | 3.3:+72173014 | MS.gene75531:CDS |
| GTTCAAACCGCCCAACCTTC+GGG | 0.329711 | 3.3:-72173481 | None:intergenic |
| TATTTCCAAAGGATTCCTTT+TGG | 0.332250 | 3.3:+72172781 | MS.gene75531:CDS |
| TTAGTCATTGGTCCAGCATT+AGG | 0.338459 | 3.3:+72172626 | MS.gene75531:CDS |
| CAATATTTATCACAAGGTAT+AGG | 0.357155 | 3.3:-72174046 | None:intergenic |
| TGGTCTGCTGGGACCTATAA+AGG | 0.359430 | 3.3:+72172313 | MS.gene75531:CDS |
| GAAAACCAGCTATAACATTA+GGG | 0.360625 | 3.3:+72172110 | MS.gene75531:CDS |
| TTATCCCAAAAGGAATCCTT+TGG | 0.364927 | 3.3:-72172786 | None:intergenic |
| GCAATGCGAGCAAGGTTAAC+AGG | 0.369231 | 3.3:-72173864 | None:intergenic |
| TTAACCTTGCTCGCATTGCT+GGG | 0.372906 | 3.3:+72173868 | MS.gene75531:CDS |
| TTGGTCTTAGCACAAATCTA+TGG | 0.392600 | 3.3:+72172252 | MS.gene75531:CDS |
| ATCAGCATGAGATTTCTTCT+TGG | 0.396540 | 3.3:+72172281 | MS.gene75531:CDS |
| CAGTAGCAATTGCCTGCATT+TGG | 0.397297 | 3.3:+72173007 | MS.gene75531:CDS |
| AGTTCAAACCGCCCAACCTT+CGG | 0.398585 | 3.3:-72173482 | None:intergenic |
| AATATTTATCACAAGGTATA+GGG | 0.399448 | 3.3:-72174045 | None:intergenic |
| GGCTGTCAGTCCCCGAAGGT+TGG | 0.407548 | 3.3:+72173470 | MS.gene75531:CDS |
| GATTTCAGGTTGTGGCAGCT+TGG | 0.411318 | 3.3:+72172594 | MS.gene75531:intron |
| GTTGTGGCAGCTTGGGGAGT+AGG | 0.417626 | 3.3:+72172602 | MS.gene75531:CDS |
| TTTGCCCTGAATGTTATTGA+AGG | 0.426862 | 3.3:+72174986 | MS.gene75531:CDS |
| TGGAAGTTTAAATGGTCTGC+TGG | 0.431629 | 3.3:+72172301 | MS.gene75531:CDS |
| TGGGGAGTAGGTTTAGTCAT+TGG | 0.434684 | 3.3:+72172614 | MS.gene75531:CDS |
| GCTGTCAGTCCCCGAAGGTT+GGG | 0.444834 | 3.3:+72173471 | MS.gene75531:CDS |
| CTGAATGTTATTGAAGGACT+TGG | 0.449350 | 3.3:+72174992 | MS.gene75531:CDS |
| GAAACACTTCACTTCCATAA+TGG | 0.459858 | 3.3:+72173129 | MS.gene75531:CDS |
| GTTGATCAAGCCAAAGAACT+TGG | 0.459865 | 3.3:+72171568 | MS.gene75531:CDS |
| CCCTTCATGACATCACTGTC+TGG | 0.465408 | 3.3:+72174017 | MS.gene75531:CDS |
| AACTTTACAACTAATGATGT+TGG | 0.466950 | 3.3:+72173501 | MS.gene75531:CDS |
| CATCAAAGAGGGGCAGCTAA+TGG | 0.467466 | 3.3:+72174357 | MS.gene75531:CDS |
| ATTAGGAGGTTATTTGGCTC+AGG | 0.468503 | 3.3:+72172643 | MS.gene75531:CDS |
| ATGTCAGCATTCAAAACAAT+AGG | 0.475779 | 3.3:+72174396 | MS.gene75531:CDS |
| TTCAAAACAATAGGTCCTGC+TGG | 0.479484 | 3.3:+72174405 | MS.gene75531:CDS |
| TATCACTGTAACTGCTCCAT+TGG | 0.480668 | 3.3:-72175061 | None:intergenic |
| ATAGCCCCTAATGTTATAGC+TGG | 0.485296 | 3.3:-72172115 | None:intergenic |
| GCCAAATAACCTCCTAATGC+TGG | 0.486167 | 3.3:-72172638 | None:intergenic |
| ACGTAGGAAACAATTTCAAC+TGG | 0.489140 | 3.3:+72174195 | MS.gene75531:intron |
| AAAAGCTGATATTACAAAGC+AGG | 0.491657 | 3.3:-72172977 | None:intergenic |
| ATCTACTTACTTATCCCAAA+AGG | 0.496556 | 3.3:-72172796 | None:intergenic |
| TGAGAATTGCCCTGGTTGTA+AGG | 0.498333 | 3.3:+72171546 | MS.gene75531:CDS |
| TGCAGCTTCCACATTGTCAG+TGG | 0.500042 | 3.3:-72173163 | None:intergenic |
| GTAACTTTGCAAGAGGGGTA+TGG | 0.502323 | 3.3:-72173994 | None:intergenic |
| TTAAATGCTTCTTTCCTCCC+AGG | 0.509352 | 3.3:+72174699 | MS.gene75531:CDS |
| CACAATGCACCGCCTCCAGC+AGG | 0.514119 | 3.3:-72174420 | None:intergenic |
| AAGTCCTTCAATAACATTCA+GGG | 0.515694 | 3.3:-72174990 | None:intergenic |
| GCCAGACAGTGATGTCATGA+AGG | 0.527185 | 3.3:-72174018 | None:intergenic |
| AAGTATTATGAGAATTGCCC+TGG | 0.529432 | 3.3:+72171538 | MS.gene75531:CDS |
| TTTCAGGTTGTGGCAGCTTG+GGG | 0.529821 | 3.3:+72172596 | MS.gene75531:intron |
| AATGTGGAAGCTGCAGAAGT+TGG | 0.533488 | 3.3:+72173171 | MS.gene75531:CDS |
| AAAGAGCGATGCAAGGGGCA+AGG | 0.535798 | 3.3:-72171740 | None:intergenic |
| GCAGGATCTTCATACATGCT+TGG | 0.536139 | 3.3:+72172037 | MS.gene75531:intron |
| AACTTTGACATCTATACCGT+GGG | 0.537488 | 3.3:+72172063 | MS.gene75531:CDS |
| GAAGGGAAAGAGCGATGCAA+GGG | 0.540991 | 3.3:-72171746 | None:intergenic |
| TTGATTAATGCAGATTAGCA+TGG | 0.549107 | 3.3:+72174664 | MS.gene75531:intron |
| GGAAGTTTAAATGGTCTGCT+GGG | 0.551066 | 3.3:+72172302 | MS.gene75531:CDS |
| GAATCCTTTGGAAATAGATG+TGG | 0.557408 | 3.3:-72172774 | None:intergenic |
| GTCAGTCCCCGAAGGTTGGG+CGG | 0.562567 | 3.3:+72173474 | MS.gene75531:CDS |
| AAGCTGGTATATTACAATAC+CGG | 0.563081 | 3.3:-72173808 | None:intergenic |
| GACAGGAACAACATCAAAGA+GGG | 0.566186 | 3.3:+72174346 | MS.gene75531:intron |
| GTCATTGGTCCAGCATTAGG+AGG | 0.567266 | 3.3:+72172629 | MS.gene75531:CDS |
| TTGATGGGTACAAAGAAAGC+TGG | 0.571034 | 3.3:-72173824 | None:intergenic |
| GAAGATATAAGCGCTTATGC+AGG | 0.572013 | 3.3:+72171926 | MS.gene75531:CDS |
| ACCCATAAGAAACTTCAGAA+TGG | 0.574517 | 3.3:-72174072 | None:intergenic |
| TAACCCCAGCAATGCGAGCA+AGG | 0.577012 | 3.3:-72173872 | None:intergenic |
| ACAATAGGTCCTGCTGGAGG+CGG | 0.577291 | 3.3:+72174411 | MS.gene75531:CDS |
| GCTTGATCAACCTTACAACC+AGG | 0.582705 | 3.3:-72171556 | None:intergenic |
| TCATGACATTACTTATCAAG+AGG | 0.583695 | 3.3:+72173296 | MS.gene75531:CDS |
| AGATGTGGGTACTTCAGTGC+TGG | 0.587132 | 3.3:-72172759 | None:intergenic |
| AAAGCTGATATTACAAAGCA+GGG | 0.587471 | 3.3:-72172976 | None:intergenic |
| CCAGACAGTGATGTCATGAA+GGG | 0.591088 | 3.3:-72174017 | None:intergenic |
| AAGGGGTAACTTTGCAAGAG+GGG | 0.594121 | 3.3:-72173999 | None:intergenic |
| AGCGCTTATGCAGGTTATGT+AGG | 0.599493 | 3.3:+72171935 | MS.gene75531:CDS |
| TAACCTTGCTCGCATTGCTG+GGG | 0.603249 | 3.3:+72173869 | MS.gene75531:CDS |
| GGTATAATATCTGATCGCTA+TGG | 0.603660 | 3.3:+72172085 | MS.gene75531:CDS |
| CGAAGGGAAAGAGCGATGCA+AGG | 0.604024 | 3.3:-72171747 | None:intergenic |
| CTCACCATGAAATAAACGAA+GGG | 0.609116 | 3.3:-72171763 | None:intergenic |
| TCTTAGCACAAATCTATGGA+TGG | 0.609413 | 3.3:+72172256 | MS.gene75531:CDS |
| ACATACCGGTAACCAAATGC+AGG | 0.615558 | 3.3:-72173019 | None:intergenic |
| TATGGGCTGTCAGTCCCCGA+AGG | 0.617694 | 3.3:+72173466 | MS.gene75531:CDS |
| GTACCCACATCTATTTCCAA+AGG | 0.617843 | 3.3:+72172770 | MS.gene75531:CDS |
| TTTCAATATTGCAGAAAGCG+AGG | 0.620341 | 3.3:+72171904 | MS.gene75531:CDS |
| CAATGAGTCCACTGACAATG+TGG | 0.626071 | 3.3:+72173155 | MS.gene75531:CDS |
| GAAGGGGTAACTTTGCAAGA+GGG | 0.628765 | 3.3:-72174000 | None:intergenic |
| AATCCTTTGGAAATAGATGT+GGG | 0.630063 | 3.3:-72172773 | None:intergenic |
| TTCAAACCGCCCAACCTTCG+GGG | 0.632663 | 3.3:-72173480 | None:intergenic |
| TGAAGGGGTAACTTTGCAAG+AGG | 0.633111 | 3.3:-72174001 | None:intergenic |
| ATTTATCACAAGGTATAGGG+TGG | 0.636330 | 3.3:-72174042 | None:intergenic |
| ACTCACCATGAAATAAACGA+AGG | 0.641568 | 3.3:-72171764 | None:intergenic |
| TGACAGGAACAACATCAAAG+AGG | 0.644505 | 3.3:+72174345 | MS.gene75531:intron |
| CGATCAGATATTATACCCCA+CGG | 0.645888 | 3.3:-72172079 | None:intergenic |
| GATTAGCATGGTCACAAAAG+CGG | 0.646524 | 3.3:+72174676 | MS.gene75531:intron |
| CCTTCTGCAAAATAGAGCAG+TGG | 0.647097 | 3.3:+72174224 | MS.gene75531:CDS |
| CTTGATCAACCTTACAACCA+GGG | 0.653325 | 3.3:-72171555 | None:intergenic |
| TAGGGAGGCATACTGTTGAG+AGG | 0.657706 | 3.3:-72172509 | None:intergenic |
| TGGAAGCAATATTTATCACA+AGG | 0.662225 | 3.3:-72174052 | None:intergenic |
| GAACTTTGACATCTATACCG+TGG | 0.663827 | 3.3:+72172062 | MS.gene75531:CDS |
| ACAATAATAGATGACATGAG+AGG | 0.666864 | 3.3:-72173255 | None:intergenic |
| AAAACCAGCTATAACATTAG+GGG | 0.672817 | 3.3:+72172111 | MS.gene75531:CDS |
| AAGGGAAAGAGCGATGCAAG+GGG | 0.674212 | 3.3:-72171745 | None:intergenic |
| CAGACAGTGATGTCATGAAG+GGG | 0.692739 | 3.3:-72174016 | None:intergenic |
| AGCTGAGCATCATACCTGGG+AGG | 0.706338 | 3.3:-72174713 | None:intergenic |
| AAAACAATAGGTCCTGCTGG+AGG | 0.707613 | 3.3:+72174408 | MS.gene75531:CDS |
| ACAGGAACAACATCAAAGAG+GGG | 0.726956 | 3.3:+72174347 | MS.gene75531:intron |
| ACTTTGACATCTATACCGTG+GGG | 0.792620 | 3.3:+72172064 | MS.gene75531:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTAAATATATTTATTTTC+AGG | + | chr3.3:72171874-72171893 | MS.gene75531:intron | 10.0% |
| !!! | TTTAGATATTCATTAATTTT+GGG | + | chr3.3:72173568-72173587 | MS.gene75531:intron | 10.0% |
| !! | TAAAAAAATTTAAAGAGTCA+AGG | - | chr3.3:72172888-72172907 | None:intergenic | 15.0% |
| !! | TCATTTATACTAATTCAAAT+AGG | + | chr3.3:72172000-72172019 | MS.gene75531:intron | 15.0% |
| !!! | ATATTGTTATATCTTTTTCT+CGG | + | chr3.3:72173607-72173626 | MS.gene75531:intron | 15.0% |
| !!! | ATTTTTGTTTAATAGCAAAA+GGG | - | chr3.3:72172691-72172710 | None:intergenic | 15.0% |
| !!! | CTTTAGATATTCATTAATTT+TGG | + | chr3.3:72173567-72173586 | MS.gene75531:intron | 15.0% |
| !! | AAGAGGGAAAAATAAAAATA+TGG | - | chr3.3:72173061-72173080 | None:intergenic | 20.0% |
| !! | AATATTTATCACAAGGTATA+GGG | - | chr3.3:72174048-72174067 | None:intergenic | 20.0% |
| !! | ACTATGTCATAAAAAAAACT+TGG | - | chr3.3:72174549-72174568 | None:intergenic | 20.0% |
| !! | GTTTGAATTATTTGCTTAAT+AGG | + | chr3.3:72174766-72174785 | MS.gene75531:intron | 20.0% |
| !! | TAAACAAAAAAGATATCAGA+GGG | - | chr3.3:72171708-72171727 | None:intergenic | 20.0% |
| !! | TTAAACAAAAAAGATATCAG+AGG | - | chr3.3:72171709-72171728 | None:intergenic | 20.0% |
| !! | TTTCTATACAAATAAGGATA+TGG | + | chr3.3:72174893-72174912 | MS.gene75531:intron | 20.0% |
| !!! | AATTTGCTCTAGTAAAAAAA+TGG | - | chr3.3:72173728-72173747 | None:intergenic | 20.0% |
| !!! | ACATATATAACATGTTGATT+TGG | + | chr3.3:72174320-72174339 | MS.gene75531:intron | 20.0% |
| !!! | ACTATTTTACATTTAACTGT+AGG | + | chr3.3:72174947-72174966 | MS.gene75531:intron | 20.0% |
| !!! | AGGTGATAAAGAATAAATTT+TGG | + | chr3.3:72172663-72172682 | MS.gene75531:intron | 20.0% |
| !!! | ATATATTTATTTTCAGGTAG+AGG | + | chr3.3:72171880-72171899 | MS.gene75531:intron | 20.0% |
| !!! | GATTTTTGTTTAATAGCAAA+AGG | - | chr3.3:72172692-72172711 | None:intergenic | 20.0% |
| !!! | TAATACTTTTTGTTCAACAA+TGG | - | chr3.3:72171526-72171545 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTTATGGAATTG+TGG | + | chr3.3:72174296-72174315 | MS.gene75531:intron | 20.0% |
| !!! | TGAGATCATACTTTTTTTTA+TGG | + | chr3.3:72174288-72174307 | MS.gene75531:intron | 20.0% |
| !!! | TTCGAAATCTTTCTTTTATA+TGG | + | chr3.3:72171605-72171624 | MS.gene75531:CDS | 20.0% |
| !!! | TTTGAATTTGTGTCATTTTA+TGG | + | chr3.3:72172371-72172390 | MS.gene75531:intron | 20.0% |
| ! | AAATTCCGAATCACAATAAT+TGG | - | chr3.3:72173914-72173933 | None:intergenic | 25.0% |
| ! | AACCTAGTTAAAGAGTAAAA+TGG | - | chr3.3:72173439-72173458 | None:intergenic | 25.0% |
| ! | AACTCTAATTTATTAGCAGA+AGG | + | chr3.3:72173696-72173715 | MS.gene75531:intron | 25.0% |
| ! | AACTTTACAACTAATGATGT+TGG | + | chr3.3:72173501-72173520 | MS.gene75531:CDS | 25.0% |
| ! | ACATATAGTATATAGCTTGA+AGG | - | chr3.3:72172176-72172195 | None:intergenic | 25.0% |
| ! | ACTCTAATTTATTAGCAGAA+GGG | + | chr3.3:72173697-72173716 | MS.gene75531:intron | 25.0% |
| ! | AGAGAAGCAAAATAAATCAA+AGG | - | chr3.3:72174452-72174471 | None:intergenic | 25.0% |
| ! | ATATGCCAATTATTGTGATT+CGG | + | chr3.3:72173906-72173925 | MS.gene75531:intron | 25.0% |
| ! | ATCACAATAATTGGCATATA+CGG | - | chr3.3:72173905-72173924 | None:intergenic | 25.0% |
| ! | CAATATTTATCACAAGGTAT+AGG | - | chr3.3:72174049-72174068 | None:intergenic | 25.0% |
| ! | GAGAAGCAAAATAAATCAAA+GGG | - | chr3.3:72174451-72174470 | None:intergenic | 25.0% |
| ! | GTATAGAAAAACACCTTTAT+AGG | - | chr3.3:72172329-72172348 | None:intergenic | 25.0% |
| ! | TAAAATTGATTGAATCTGCA+GGG | + | chr3.3:72174497-72174516 | MS.gene75531:intron | 25.0% |
| ! | TACAACTTACATTTCAATGT+CGG | - | chr3.3:72173661-72173680 | None:intergenic | 25.0% |
| ! | TCAAAAGCAGAATAAGAAAA+TGG | - | chr3.3:72174648-72174667 | None:intergenic | 25.0% |
| ! | TCAGAGTTTCTATACAAATA+AGG | + | chr3.3:72174887-72174906 | MS.gene75531:intron | 25.0% |
| ! | TGTAAAGAAAGAAAAACCAA+TGG | + | chr3.3:72175045-72175064 | MS.gene75531:CDS | 25.0% |
| ! | TTAAAACAACAATAGACTGA+AGG | - | chr3.3:72172714-72172733 | None:intergenic | 25.0% |
| ! | TTAAAATTGATTGAATCTGC+AGG | + | chr3.3:72174496-72174515 | MS.gene75531:intron | 25.0% |
| ! | TTAATAGGAAAGAACATAAC+TGG | + | chr3.3:72174781-72174800 | MS.gene75531:intron | 25.0% |
| ! | TTGTAGCTTACATATATCAT+TGG | - | chr3.3:72172429-72172448 | None:intergenic | 25.0% |
| ! | TTTCTTCTTGGAAGTTTAAA+TGG | + | chr3.3:72172293-72172312 | MS.gene75531:CDS | 25.0% |
| !! | TCTTTTAGTAGCTATATTAC+TGG | + | chr3.3:72174918-72174937 | MS.gene75531:intron | 25.0% |
| !! | TTTGATGTTCAAACCATTTT+TGG | + | chr3.3:72175021-72175040 | MS.gene75531:CDS | 25.0% |
| !!! | ATGAAAGCCTATTTCTAAAT+TGG | + | chr3.3:72173232-72173251 | MS.gene75531:CDS | 25.0% |
| !!! | CAATTTTAAGATGTCAACAA+TGG | - | chr3.3:72174485-72174504 | None:intergenic | 25.0% |
| !!! | TTGAAATTTGTCTTGTTGTT+TGG | + | chr3.3:72173948-72173967 | MS.gene75531:intron | 25.0% |
| !!! | TTGATGTTCAAACCATTTTT+GGG | + | chr3.3:72175022-72175041 | MS.gene75531:CDS | 25.0% |
| AAAAAATATGGAAACCTGCA+AGG | - | chr3.3:72172955-72172974 | None:intergenic | 30.0% | |
| AAAACCAGCTATAACATTAG+GGG | + | chr3.3:72172111-72172130 | MS.gene75531:CDS | 30.0% | |
| AAAAGCTGATATTACAAAGC+AGG | - | chr3.3:72172980-72172999 | None:intergenic | 30.0% | |
| AAAGCTGATATTACAAAGCA+GGG | - | chr3.3:72172979-72172998 | None:intergenic | 30.0% | |
| AAATTAATATACGCAGCAGA+GGG | - | chr3.3:72173354-72173373 | None:intergenic | 30.0% | |
| AACTTGAATACATAGCTGAT+AGG | - | chr3.3:72174572-72174591 | None:intergenic | 30.0% | |
| AAGCTGGTATATTACAATAC+CGG | - | chr3.3:72173811-72173830 | None:intergenic | 30.0% | |
| AAGTCCTTCAATAACATTCA+GGG | - | chr3.3:72174993-72175012 | None:intergenic | 30.0% | |
| ACAATAATAGATGACATGAG+AGG | - | chr3.3:72173258-72173277 | None:intergenic | 30.0% | |
| ACATGTCGAATATAATAGCT+CGG | + | chr3.3:72172563-72172582 | MS.gene75531:intron | 30.0% | |
| AGAAAACCAGCTATAACATT+AGG | + | chr3.3:72172109-72172128 | MS.gene75531:CDS | 30.0% | |
| AGAGAAGAAAATCAAGCTTT+AGG | + | chr3.3:72172486-72172505 | MS.gene75531:CDS | 30.0% | |
| AGATACGATATAGTAGACAA+AGG | - | chr3.3:72172536-72172555 | None:intergenic | 30.0% | |
| ATCTACTTACTTATCCCAAA+AGG | - | chr3.3:72172799-72172818 | None:intergenic | 30.0% | |
| ATGTCAGCATTCAAAACAAT+AGG | + | chr3.3:72174396-72174415 | MS.gene75531:CDS | 30.0% | |
| CATATACATATATAGTCGCA+TGG | - | chr3.3:72173088-72173107 | None:intergenic | 30.0% | |
| GAAAAATAAAAATATGGCCG+AGG | - | chr3.3:72173055-72173074 | None:intergenic | 30.0% | |
| GAAAACCAGCTATAACATTA+GGG | + | chr3.3:72172110-72172129 | MS.gene75531:CDS | 30.0% | |
| GAGGAAATTAAGATACATAC+CGG | - | chr3.3:72173036-72173055 | None:intergenic | 30.0% | |
| GATATAGTAGACAAAGGTTA+GGG | - | chr3.3:72172530-72172549 | None:intergenic | 30.0% | |
| GGTATGTATCTTAATTTCCT+CGG | + | chr3.3:72173035-72173054 | MS.gene75531:intron | 30.0% | |
| GTAATGAGATAACAGCTAAT+GGG | - | chr3.3:72174262-72174281 | None:intergenic | 30.0% | |
| GTTAGTCAATATAAAGAGAG+AGG | - | chr3.3:72174158-72174177 | None:intergenic | 30.0% | |
| TAAATTAATATACGCAGCAG+AGG | - | chr3.3:72173355-72173374 | None:intergenic | 30.0% | |
| TAGGATTGTAAAAATGTTGC+AGG | + | chr3.3:72172019-72172038 | MS.gene75531:intron | 30.0% | |
| TCATGACATTACTTATCAAG+AGG | + | chr3.3:72173296-72173315 | MS.gene75531:CDS | 30.0% | |
| TCTTTCTTTACACCCAAAAA+TGG | - | chr3.3:72175037-72175056 | None:intergenic | 30.0% | |
| TGGAAGCAATATTTATCACA+AGG | - | chr3.3:72174055-72174074 | None:intergenic | 30.0% | |
| TTGATTAATGCAGATTAGCA+TGG | + | chr3.3:72174664-72174683 | MS.gene75531:intron | 30.0% | |
| ! | AATCCTTTGGAAATAGATGT+GGG | - | chr3.3:72172776-72172795 | None:intergenic | 30.0% |
| ! | ACTAACTGTAGTACTTTTGT+TGG | + | chr3.3:72174172-72174191 | MS.gene75531:intron | 30.0% |
| ! | ATTTCCAAAGGATTCCTTTT+GGG | + | chr3.3:72172782-72172801 | MS.gene75531:CDS | 30.0% |
| ! | CACCATTTTACTCTTTAACT+AGG | + | chr3.3:72173434-72173453 | MS.gene75531:intron | 30.0% |
| ! | TAACTAGGTTTTCTCGTTAT+GGG | + | chr3.3:72173449-72173468 | MS.gene75531:intron | 30.0% |
| ! | TATTTCCAAAGGATTCCTTT+TGG | + | chr3.3:72172781-72172800 | MS.gene75531:CDS | 30.0% |
| ! | TCTTGTTCTAAACTCTTCAA+TGG | + | chr3.3:72174844-72174863 | MS.gene75531:intron | 30.0% |
| ! | TCTTTCTTTTATATGGATCG+CGG | + | chr3.3:72171612-72171631 | MS.gene75531:CDS | 30.0% |
| ! | TTAACTAGGTTTTCTCGTTA+TGG | + | chr3.3:72173448-72173467 | MS.gene75531:intron | 30.0% |
| !! | TCCATTCTGAAGTTTCTTAT+GGG | + | chr3.3:72174071-72174090 | MS.gene75531:CDS | 30.0% |
| !! | TGACTTTTTCTAAACCATTC+AGG | + | chr3.3:72173783-72173802 | MS.gene75531:intron | 30.0% |
| !! | TTATACTTTGTTGTTGTGCT+CGG | + | chr3.3:72172905-72172924 | MS.gene75531:intron | 30.0% |
| !! | TTCCATTCTGAAGTTTCTTA+TGG | + | chr3.3:72174070-72174089 | MS.gene75531:CDS | 30.0% |
| !!! | GGTGAGTTTAACTTTTTTAC+TGG | + | chr3.3:72171780-72171799 | MS.gene75531:intron | 30.0% |
| AACATCTGTTCCAAGTTCTT+TGG | - | chr3.3:72171581-72171600 | None:intergenic | 35.0% | |
| AACTTTGACATCTATACCGT+GGG | + | chr3.3:72172063-72172082 | MS.gene75531:CDS | 35.0% | |
| AAGTATTATGAGAATTGCCC+TGG | + | chr3.3:72171538-72171557 | MS.gene75531:CDS | 35.0% | |
| ACAAAAAAGATATCAGAGGG+AGG | - | chr3.3:72171705-72171724 | None:intergenic | 35.0% | |
| ACAAAGCAGGGCAAAAAATA+TGG | - | chr3.3:72172967-72172986 | None:intergenic | 35.0% | |
| ACCCATAAGAAACTTCAGAA+TGG | - | chr3.3:72174075-72174094 | None:intergenic | 35.0% | |
| ACGTAGGAAACAATTTCAAC+TGG | + | chr3.3:72174195-72174214 | MS.gene75531:intron | 35.0% | |
| ACTCACCATGAAATAAACGA+AGG | - | chr3.3:72171767-72171786 | None:intergenic | 35.0% | |
| ATCAGCATGAGATTTCTTCT+TGG | + | chr3.3:72172281-72172300 | MS.gene75531:CDS | 35.0% | |
| ATTTATCACAAGGTATAGGG+TGG | - | chr3.3:72174045-72174064 | None:intergenic | 35.0% | |
| CAAATCATAAATCACCTTGC+AGG | + | chr3.3:72172938-72172957 | MS.gene75531:intron | 35.0% | |
| CAAGTCCTTCAATAACATTC+AGG | - | chr3.3:72174994-72175013 | None:intergenic | 35.0% | |
| CATAAGCCTGTTAATACAAG+AGG | - | chr3.3:72172452-72172471 | None:intergenic | 35.0% | |
| CGATATAGTAGACAAAGGTT+AGG | - | chr3.3:72172531-72172550 | None:intergenic | 35.0% | |
| CGTAATGAGATAACAGCTAA+TGG | - | chr3.3:72174263-72174282 | None:intergenic | 35.0% | |
| CTACAACCTCTTGTATTAAC+AGG | + | chr3.3:72172443-72172462 | MS.gene75531:intron | 35.0% | |
| CTCACCATGAAATAAACGAA+GGG | - | chr3.3:72171766-72171785 | None:intergenic | 35.0% | |
| CTGAATGTTATTGAAGGACT+TGG | + | chr3.3:72174992-72175011 | MS.gene75531:CDS | 35.0% | |
| CTTTCCCTTCGTTTATTTCA+TGG | + | chr3.3:72171759-72171778 | MS.gene75531:CDS | 35.0% | |
| GAAACACTTCACTTCCATAA+TGG | + | chr3.3:72173129-72173148 | MS.gene75531:CDS | 35.0% | |
| GGTATAATATCTGATCGCTA+TGG | + | chr3.3:72172085-72172104 | MS.gene75531:CDS | 35.0% | |
| GTTTGGCATACACAATATGT+AGG | + | chr3.3:72173965-72173984 | MS.gene75531:intron | 35.0% | |
| TATCGCTCGTGAATCATAAT+TGG | - | chr3.3:72174124-72174143 | None:intergenic | 35.0% | |
| TCTTAGCACAAATCTATGGA+TGG | + | chr3.3:72172256-72172275 | MS.gene75531:CDS | 35.0% | |
| TGAGAGGCCAATTTAGAAAT+AGG | - | chr3.3:72173242-72173261 | None:intergenic | 35.0% | |
| TTATCCCAAAAGGAATCCTT+TGG | - | chr3.3:72172789-72172808 | None:intergenic | 35.0% | |
| TTTCAATATTGCAGAAAGCG+AGG | + | chr3.3:72171904-72171923 | MS.gene75531:CDS | 35.0% | |
| TTTCTAAACCATTCAGGTAC+CGG | + | chr3.3:72173789-72173808 | MS.gene75531:intron | 35.0% | |
| TTTGCCCTGAATGTTATTGA+AGG | + | chr3.3:72174986-72175005 | MS.gene75531:CDS | 35.0% | |
| ! | GAATCCTTTGGAAATAGATG+TGG | - | chr3.3:72172777-72172796 | None:intergenic | 35.0% |
| ! | GCAAACAACATTGTTGTTAC+AGG | - | chr3.3:72172202-72172221 | None:intergenic | 35.0% |
| ! | TGTTCTAAACTCTTCAATGG+TGG | + | chr3.3:72174847-72174866 | MS.gene75531:intron | 35.0% |
| !! | ACATGTTGATTTGGTATGAC+AGG | + | chr3.3:72174329-72174348 | MS.gene75531:intron | 35.0% |
| !! | CACAGACTTTTTGCATTGAT+GGG | - | chr3.3:72173842-72173861 | None:intergenic | 35.0% |
| !! | GTCATTTTCAACACGTTGTT+TGG | + | chr3.3:72172233-72172252 | MS.gene75531:CDS | 35.0% |
| !! | TTGGTCTTAGCACAAATCTA+TGG | + | chr3.3:72172252-72172271 | MS.gene75531:CDS | 35.0% |
| AACTCAAGAGTTGCAGTATG+AGG | - | chr3.3:72171822-72171841 | None:intergenic | 40.0% | |
| AATTGCCTGCATTTGGTTAC+CGG | + | chr3.3:72173014-72173033 | MS.gene75531:CDS | 40.0% | |
| ACAGGAACAACATCAAAGAG+GGG | + | chr3.3:72174347-72174366 | MS.gene75531:intron | 40.0% | |
| ACATGAAGTCATGCTTTCCT+TGG | + | chr3.3:72172150-72172169 | MS.gene75531:intron | 40.0% | |
| ACTCAAGAGTTGCAGTATGA+GGG | - | chr3.3:72171821-72171840 | None:intergenic | 40.0% | |
| ACTTTGACATCTATACCGTG+GGG | + | chr3.3:72172064-72172083 | MS.gene75531:CDS | 40.0% | |
| AGTATATAGCTTGAAGGCCA+AGG | - | chr3.3:72172170-72172189 | None:intergenic | 40.0% | |
| ATAGCCCCTAATGTTATAGC+TGG | - | chr3.3:72172118-72172137 | None:intergenic | 40.0% | |
| ATAGTAGACAAAGGTTAGGG+AGG | - | chr3.3:72172527-72172546 | None:intergenic | 40.0% | |
| ATAGTCGCATGGTATGAAGA+GGG | - | chr3.3:72173077-72173096 | None:intergenic | 40.0% | |
| ATGAGATAACAGCTAATGGG+AGG | - | chr3.3:72174259-72174278 | None:intergenic | 40.0% | |
| ATGATTCACGAGCGATATTG+AGG | + | chr3.3:72174127-72174146 | MS.gene75531:intron | 40.0% | |
| ATTAAGCTGAGCATCATACC+TGG | - | chr3.3:72174720-72174739 | None:intergenic | 40.0% | |
| CCATCAATGCAAAAAGTCTG+TGG | + | chr3.3:72173840-72173859 | MS.gene75531:CDS | 40.0% | |
| CGATCAGATATTATACCCCA+CGG | - | chr3.3:72172082-72172101 | None:intergenic | 40.0% | |
| CTAAACTCTTCAATGGTGGT+AGG | + | chr3.3:72174851-72174870 | MS.gene75531:intron | 40.0% | |
| CTTGATCAACCTTACAACCA+GGG | - | chr3.3:72171558-72171577 | None:intergenic | 40.0% | |
| GAACTTTGACATCTATACCG+TGG | + | chr3.3:72172062-72172081 | MS.gene75531:CDS | 40.0% | |
| GAAGATATAAGCGCTTATGC+AGG | + | chr3.3:72171926-72171945 | MS.gene75531:CDS | 40.0% | |
| GACAGGAACAACATCAAAGA+GGG | + | chr3.3:72174346-72174365 | MS.gene75531:intron | 40.0% | |
| GATTAGCATGGTCACAAAAG+CGG | + | chr3.3:72174676-72174695 | MS.gene75531:intron | 40.0% | |
| GGAACAGGAAAATCATGAAG+TGG | - | chr3.3:72173329-72173348 | None:intergenic | 40.0% | |
| GGAAGTTTAAATGGTCTGCT+GGG | + | chr3.3:72172302-72172321 | MS.gene75531:CDS | 40.0% | |
| GGCAATGTTCTTGCAATATC+AGG | + | chr3.3:72173522-72173541 | MS.gene75531:CDS | 40.0% | |
| GTACCCACATCTATTTCCAA+AGG | + | chr3.3:72172770-72172789 | MS.gene75531:CDS | 40.0% | |
| GTATCACAAGCACAAACATG+TGG | - | chr3.3:72174605-72174624 | None:intergenic | 40.0% | |
| GTTGATCAAGCCAAAGAACT+TGG | + | chr3.3:72171568-72171587 | MS.gene75531:CDS | 40.0% | |
| TATAGTCGCATGGTATGAAG+AGG | - | chr3.3:72173078-72173097 | None:intergenic | 40.0% | |
| TATCGTCGTGCTCTATAAAC+TGG | + | chr3.3:72173385-72173404 | MS.gene75531:intron | 40.0% | |
| TCCAGCATTAGGAGGTTATT+TGG | + | chr3.3:72172637-72172656 | MS.gene75531:CDS | 40.0% | |
| TGACAGGAACAACATCAAAG+AGG | + | chr3.3:72174345-72174364 | MS.gene75531:intron | 40.0% | |
| TGAGATAACAGCTAATGGGA+GGG | - | chr3.3:72174258-72174277 | None:intergenic | 40.0% | |
| TGATTCACGAGCGATATTGA+GGG | + | chr3.3:72174128-72174147 | MS.gene75531:intron | 40.0% | |
| TGGAAGTTTAAATGGTCTGC+TGG | + | chr3.3:72172301-72172320 | MS.gene75531:CDS | 40.0% | |
| TTAAATGCTTCTTTCCTCCC+AGG | + | chr3.3:72174699-72174718 | MS.gene75531:CDS | 40.0% | |
| TTAAGCTGAGCATCATACCT+GGG | - | chr3.3:72174719-72174738 | None:intergenic | 40.0% | |
| TTACAATACCGGTACCTGAA+TGG | - | chr3.3:72173800-72173819 | None:intergenic | 40.0% | |
| TTAGTCATTGGTCCAGCATT+AGG | + | chr3.3:72172626-72172645 | MS.gene75531:CDS | 40.0% | |
| TTCAAAACAATAGGTCCTGC+TGG | + | chr3.3:72174405-72174424 | MS.gene75531:CDS | 40.0% | |
| ! | ATTAGGAGGTTATTTGGCTC+AGG | + | chr3.3:72172643-72172662 | MS.gene75531:CDS | 40.0% |
| ! | CCACAGACTTTTTGCATTGA+TGG | - | chr3.3:72173843-72173862 | None:intergenic | 40.0% |
| ! | GTAGTACTTTTGTTGGACGT+AGG | + | chr3.3:72174179-72174198 | MS.gene75531:intron | 40.0% |
| ! | TTGATGGGTACAAAGAAAGC+TGG | - | chr3.3:72173827-72173846 | None:intergenic | 40.0% |
| !! | ATATGGATCGCGGTTTTATG+TGG | + | chr3.3:72171622-72171641 | MS.gene75531:CDS | 40.0% |
| !! | TGTGATCTGATTTCAGGTTG+TGG | + | chr3.3:72172586-72172605 | MS.gene75531:intron | 40.0% |
| AAAACAATAGGTCCTGCTGG+AGG | + | chr3.3:72174408-72174427 | MS.gene75531:CDS | 45.0% | |
| AAACTGGCGTTTCATCGAAG+TGG | + | chr3.3:72173401-72173420 | MS.gene75531:intron | 45.0% | |
| AAGGGGTAACTTTGCAAGAG+GGG | - | chr3.3:72174002-72174021 | None:intergenic | 45.0% | |
| AATGTGGAAGCTGCAGAAGT+TGG | + | chr3.3:72173171-72173190 | MS.gene75531:CDS | 45.0% | |
| ACATACCGGTAACCAAATGC+AGG | - | chr3.3:72173022-72173041 | None:intergenic | 45.0% | |
| AGCGCTTATGCAGGTTATGT+AGG | + | chr3.3:72171935-72171954 | MS.gene75531:CDS | 45.0% | |
| CAATGAGTCCACTGACAATG+TGG | + | chr3.3:72173155-72173174 | MS.gene75531:CDS | 45.0% | |
| CAGACAGTGATGTCATGAAG+GGG | - | chr3.3:72174019-72174038 | None:intergenic | 45.0% | |
| CAGTAGCAATTGCCTGCATT+TGG | + | chr3.3:72173007-72173026 | MS.gene75531:CDS | 45.0% | |
| CCAGACAGTGATGTCATGAA+GGG | - | chr3.3:72174020-72174039 | None:intergenic | 45.0% | |
| CCTTCTGCAAAATAGAGCAG+TGG | + | chr3.3:72174224-72174243 | MS.gene75531:CDS | 45.0% | |
| GAAGGGGTAACTTTGCAAGA+GGG | - | chr3.3:72174003-72174022 | None:intergenic | 45.0% | |
| GCAGGATCTTCATACATGCT+TGG | + | chr3.3:72172037-72172056 | MS.gene75531:intron | 45.0% | |
| GCCAAATAACCTCCTAATGC+TGG | - | chr3.3:72172641-72172660 | None:intergenic | 45.0% | |
| GCTTGATCAACCTTACAACC+AGG | - | chr3.3:72171559-72171578 | None:intergenic | 45.0% | |
| GTAACTTTGCAAGAGGGGTA+TGG | - | chr3.3:72173997-72174016 | None:intergenic | 45.0% | |
| TAATATACGCAGCAGAGGGT+CGG | - | chr3.3:72173350-72173369 | None:intergenic | 45.0% | |
| TGAAGGGGTAACTTTGCAAG+AGG | - | chr3.3:72174004-72174023 | None:intergenic | 45.0% | |
| TGAGAATTGCCCTGGTTGTA+AGG | + | chr3.3:72171546-72171565 | MS.gene75531:CDS | 45.0% | |
| TGGACTCATTGCTGCCATTA+TGG | - | chr3.3:72173146-72173165 | None:intergenic | 45.0% | |
| TGGGGAGTAGGTTTAGTCAT+TGG | + | chr3.3:72172614-72172633 | MS.gene75531:CDS | 45.0% | |
| TTAACCTTGCTCGCATTGCT+GGG | + | chr3.3:72173868-72173887 | MS.gene75531:CDS | 45.0% | |
| ! | CCACTGCTCTATTTTGCAGA+AGG | - | chr3.3:72174227-72174246 | None:intergenic | 45.0% |
| !! | ATTTCAGGTTGTGGCAGCTT+GGG | + | chr3.3:72172595-72172614 | MS.gene75531:intron | 45.0% |
| AAGGGAAAGAGCGATGCAAG+GGG | - | chr3.3:72171748-72171767 | None:intergenic | 50.0% | |
| AGATGTGGGTACTTCAGTGC+TGG | - | chr3.3:72172762-72172781 | None:intergenic | 50.0% | |
| AGTTCAAACCGCCCAACCTT+CGG | - | chr3.3:72173485-72173504 | None:intergenic | 50.0% | |
| CATCAAAGAGGGGCAGCTAA+TGG | + | chr3.3:72174357-72174376 | MS.gene75531:CDS | 50.0% | |
| CCCTTCATGACATCACTGTC+TGG | + | chr3.3:72174017-72174036 | MS.gene75531:CDS | 50.0% | |
| GAAGGGAAAGAGCGATGCAA+GGG | - | chr3.3:72171749-72171768 | None:intergenic | 50.0% | |
| GCAATGCGAGCAAGGTTAAC+AGG | - | chr3.3:72173867-72173886 | None:intergenic | 50.0% | |
| GCCAGACAGTGATGTCATGA+AGG | - | chr3.3:72174021-72174040 | None:intergenic | 50.0% | |
| GTCATTGGTCCAGCATTAGG+AGG | + | chr3.3:72172629-72172648 | MS.gene75531:CDS | 50.0% | |
| GTTAACCTTGCTCGCATTGC+TGG | + | chr3.3:72173867-72173886 | MS.gene75531:CDS | 50.0% | |
| TAACCTTGCTCGCATTGCTG+GGG | + | chr3.3:72173869-72173888 | MS.gene75531:CDS | 50.0% | |
| TGCAGCTTCCACATTGTCAG+TGG | - | chr3.3:72173166-72173185 | None:intergenic | 50.0% | |
| TGGTCTGCTGGGACCTATAA+AGG | + | chr3.3:72172313-72172332 | MS.gene75531:CDS | 50.0% | |
| ! | TAGGGAGGCATACTGTTGAG+AGG | - | chr3.3:72172512-72172531 | None:intergenic | 50.0% |
| !! | GATTTCAGGTTGTGGCAGCT+TGG | + | chr3.3:72172594-72172613 | MS.gene75531:intron | 50.0% |
| !! | GCTCGGTGTGATCTGATTTC+AGG | + | chr3.3:72172580-72172599 | MS.gene75531:intron | 50.0% |
| !! | TTTCAGGTTGTGGCAGCTTG+GGG | + | chr3.3:72172596-72172615 | MS.gene75531:intron | 50.0% |
| AAAGAGCGATGCAAGGGGCA+AGG | - | chr3.3:72171743-72171762 | None:intergenic | 55.0% | |
| ACAATAGGTCCTGCTGGAGG+CGG | + | chr3.3:72174411-72174430 | MS.gene75531:CDS | 55.0% | |
| AGCTGAGCATCATACCTGGG+AGG | - | chr3.3:72174716-72174735 | None:intergenic | 55.0% | |
| CGAAGGGAAAGAGCGATGCA+AGG | - | chr3.3:72171750-72171769 | None:intergenic | 55.0% | |
| GTGTGTGCGTGTATCACTGC+AGG | + | chr3.3:72173107-72173126 | MS.gene75531:intron | 55.0% | |
| GTTCAAACCGCCCAACCTTC+GGG | - | chr3.3:72173484-72173503 | None:intergenic | 55.0% | |
| TAACCCCAGCAATGCGAGCA+AGG | - | chr3.3:72173875-72173894 | None:intergenic | 55.0% | |
| TTCAAACCGCCCAACCTTCG+GGG | - | chr3.3:72173483-72173502 | None:intergenic | 55.0% | |
| GCTGTCAGTCCCCGAAGGTT+GGG | + | chr3.3:72173471-72173490 | MS.gene75531:CDS | 60.0% | |
| GTTGTGGCAGCTTGGGGAGT+AGG | + | chr3.3:72172602-72172621 | MS.gene75531:CDS | 60.0% | |
| ! | TATGGGCTGTCAGTCCCCGA+AGG | + | chr3.3:72173466-72173485 | MS.gene75531:CDS | 60.0% |
| !! | GGGTACTTCAGTGCTGGCTG+TGG | - | chr3.3:72172756-72172775 | None:intergenic | 60.0% |
| ACGCAGCAGAGGGTCGGAAC+AGG | - | chr3.3:72173344-72173363 | None:intergenic | 65.0% | |
| CACAATGCACCGCCTCCAGC+AGG | - | chr3.3:72174423-72174442 | None:intergenic | 65.0% | |
| GGCTGTCAGTCCCCGAAGGT+TGG | + | chr3.3:72173470-72173489 | MS.gene75531:CDS | 65.0% | |
| GTCAGTCCCCGAAGGTTGGG+CGG | + | chr3.3:72173474-72173493 | MS.gene75531:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72171499 | 72175081 | 72171499 | ID=MS.gene75531 |
| chr3.3 | mRNA | 72171499 | 72175081 | 72171499 | ID=MS.gene75531.t1;Parent=MS.gene75531 |
| chr3.3 | exon | 72171499 | 72171646 | 72171499 | ID=MS.gene75531.t1.exon1;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72171499 | 72171646 | 72171499 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72171740 | 72171780 | 72171740 | ID=MS.gene75531.t1.exon2;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72171740 | 72171780 | 72171740 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72171896 | 72171956 | 72171896 | ID=MS.gene75531.t1.exon3;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72171896 | 72171956 | 72171896 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172041 | 72172143 | 72172041 | ID=MS.gene75531.t1.exon4;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172041 | 72172143 | 72172041 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172232 | 72172334 | 72172232 | ID=MS.gene75531.t1.exon5;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172232 | 72172334 | 72172232 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172465 | 72172518 | 72172465 | ID=MS.gene75531.t1.exon6;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172465 | 72172518 | 72172465 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172602 | 72172664 | 72172602 | ID=MS.gene75531.t1.exon7;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172602 | 72172664 | 72172602 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172759 | 72172808 | 72172759 | ID=MS.gene75531.t1.exon8;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172759 | 72172808 | 72172759 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72172960 | 72173035 | 72172960 | ID=MS.gene75531.t1.exon9;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72172960 | 72173035 | 72172960 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72173129 | 72173317 | 72173129 | ID=MS.gene75531.t1.exon10;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72173129 | 72173317 | 72173129 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72173456 | 72173543 | 72173456 | ID=MS.gene75531.t1.exon11;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72173456 | 72173543 | 72173456 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72173805 | 72173890 | 72173805 | ID=MS.gene75531.t1.exon12;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72173805 | 72173890 | 72173805 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72173987 | 72174094 | 72173987 | ID=MS.gene75531.t1.exon13;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72173987 | 72174094 | 72173987 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72174201 | 72174245 | 72174201 | ID=MS.gene75531.t1.exon14;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72174201 | 72174245 | 72174201 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72174351 | 72174439 | 72174351 | ID=MS.gene75531.t1.exon15;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72174351 | 72174439 | 72174351 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72174677 | 72174720 | 72174677 | ID=MS.gene75531.t1.exon16;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72174677 | 72174720 | 72174677 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| chr3.3 | exon | 72174969 | 72175081 | 72174969 | ID=MS.gene75531.t1.exon17;Parent=MS.gene75531.t1 |
| chr3.3 | CDS | 72174969 | 72175081 | 72174969 | ID=cds.MS.gene75531.t1;Parent=MS.gene75531.t1 |
| Gene Sequence |
| Protein sequence |
